| Clone Name | rbags1e22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK066205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059O10, full insert sequence Length = 3354 Score = 61.9 bits (31), Expect = 8e-07 Identities = 38/41 (92%) Strand = Plus / Minus Query: 92 tatctncaaggagtgctctggnatgtacgtaagacctttct 132 ||||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 2801 tatctccaaggagtgctctggtatgtatgtaagacctttct 2761
>dbj|AK062056.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C05, full insert sequence Length = 2024 Score = 61.9 bits (31), Expect = 8e-07 Identities = 38/41 (92%) Strand = Plus / Minus Query: 92 tatctncaaggagtgctctggnatgtacgtaagacctttct 132 ||||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 1519 tatctccaaggagtgctctggtatgtatgtaagacctttct 1479
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 92 tatctncaaggagtgctctggnatgtacgtaagacct 128 ||||| ||||||||||||||| ||||| ||||||||| Sbjct: 2893781 tatctccaaggagtgctctggtatgtatgtaagacct 2893745
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 54.0 bits (27), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 92 tatctncaaggagtgctctggnatgtacgtaagacct 128 ||||| ||||||||||||||| ||||| ||||||||| Sbjct: 31268 tatctccaaggagtgctctggtatgtatgtaagacct 31232
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 92 tatctncaaggagtgctctggnatgtacgtaagacct 128 ||||| ||||||||||||||| ||||| ||||||||| Sbjct: 2893892 tatctccaaggagtgctctggtatgtatgtaagacct 2893856
>gb|AY111426.1| Zea mays CL12066_1 mRNA sequence Length = 655 Score = 46.1 bits (23), Expect = 0.048 Identities = 63/77 (81%) Strand = Plus / Plus Query: 56 ctatgaccttcctgctgagatggcagacgatgcgtgtatctncaaggagtgctctggnat 115 |||||||||||||| ||| || |||| | || ||||||| |||||||||||| || || Sbjct: 521 ctatgaccttcctgatgacataccagaggtggcatgtatctccaaggagtgctccggaat 580 Query: 116 gtacgtaagacctttct 132 ||| | ||| ||||||| Sbjct: 581 gtaagcaaggcctttct 597
>gb|AC158127.3| Mus musculus chromosome 19, clone RP23-135N12, complete sequence Length = 217544 Score = 42.1 bits (21), Expect = 0.75 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cacagaagacataagagtaat 35 ||||||||||||||||||||| Sbjct: 17442 cacagaagacataagagtaat 17422
>gb|AC108836.23| Mus musculus chromosome 19, clone RP23-276L15, complete sequence Length = 196065 Score = 42.1 bits (21), Expect = 0.75 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cacagaagacataagagtaat 35 ||||||||||||||||||||| Sbjct: 128002 cacagaagacataagagtaat 127982 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 826,556 Number of Sequences: 3902068 Number of extensions: 826556 Number of successful extensions: 14868 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 14845 Number of HSP's gapped (non-prelim): 22 length of query: 230 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 208 effective length of database: 17,147,199,772 effective search space: 3566617552576 effective search space used: 3566617552576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)