| Clone Name | rbags1e21 |
|---|---|
| Clone Library Name | barley_pub |
>OAF_DROME (Q9NLA6) Out at first protein [Contains: Out at first short| protein] Length = 487 Score = 31.2 bits (69), Expect = 3.3 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -1 Query: 607 PLDQSTNGSHYGDGATQSTFEASGSLPPMPSTFDDMPSVSNKPANS 470 P Q H+ A S ++S S PP PST PS S+ ++S Sbjct: 435 PSRQQKQHQHHSQVAPTSHHQSSSSTPPTPSTSSSPPSSSSSSSSS 480
>NU153_HUMAN (P49790) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)| (153 kDa nucleoporin) Length = 1475 Score = 30.8 bits (68), Expect = 4.3 Identities = 21/79 (26%), Positives = 38/79 (48%) Frame = -1 Query: 706 FSYDFSGETFSYDLTGGTFSYDLSVPNNQFLQYPLDQSTNGSHYGDGATQSTFEASGSLP 527 FS+ S +T + + TFS+ ++ P+ + + P + + GA ST G+ Sbjct: 1133 FSFGNSEQTKDENSSKSTFSFSMTKPSEKESEQPAKAT-----FAFGAQTSTTADQGAAK 1187 Query: 526 PMPSTFDDMPSVSNKPANS 470 P+ S ++ S S+ PA S Sbjct: 1188 PVFSFLNNSSSSSSTPATS 1206
>CDS2_MOUSE (Q99L43) Phosphatidate cytidylyltransferase 2 (EC 2.7.7.41)| (CDP-diglyceride synthetase 2) (CDP-diglyceride pyrophosphorylase 2) (CDP-diacylglycerol synthase 2) (CDS 2) (CTP:phosphatidate cytidylyltransferase 2) (CDP-DAG synthase 2) (CDP-DG sy Length = 444 Score = 30.8 bits (68), Expect = 4.3 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -1 Query: 607 PLDQSTNGSHYGDGATQSTFEASGSLPPMPSTFDDMPSVSNK 482 P D+ + DG T S E+ P+P++ DD P V N+ Sbjct: 15 PEDKESESEAKLDGETASDSESRAETAPLPTSVDDTPEVLNR 56
>CNX1_ARATH (Q39054) Molybdopterin biosynthesis CNX1 protein (Molybdenum| cofactor biosynthesis enzyme CNX1) Length = 670 Score = 30.4 bits (67), Expect = 5.6 Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 12/99 (12%) Frame = +3 Query: 84 VIKLLQKDLRWTAAYPSXIRHLPNQQKTVSPQXKQ*ARSLVQYCGRD*DTT--------- 236 V+ +++ WT+ +P +R + P + R+++++ D T Sbjct: 337 VVPTIRQLAGWTSPHPLRVRLRLQEPIKSDPIRPEFHRAIIKWKDNDGSGTPGFVAESTG 396 Query: 237 ---KFRLLQKSSSDAMMQTPLFGNLQHGPTSKASIVASD 344 RLL S++A+++ P GN+ +S ++I+ SD Sbjct: 397 HQMSSRLLSMRSANALLELPATGNVLSAGSSVSAIIVSD 435
>ZDS2_YEAST (P54786) Protein ZDS2| Length = 942 Score = 30.4 bits (67), Expect = 5.6 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = -1 Query: 676 SYDLTGGTFSYDLSVPNNQFLQYPLDQSTNGSHYGDGATQSTFEASGSLPPMPSTFDDM- 500 S+D++GG +YD+ V ++ + + T T +LPP TF+D+ Sbjct: 769 SFDISGGDVNYDVEVHSSISRDTTAGLEEDIGAEREDNTSPTAPQISTLPPRKLTFEDVV 828 Query: 499 -PSVSNKP 479 P SN P Sbjct: 829 KPDYSNAP 836
>SUHW4_HUMAN (Q6N043) Suppressor of hairy wing homolog 4| Length = 979 Score = 30.0 bits (66), Expect = 7.3 Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 10/69 (14%) Frame = -1 Query: 616 LQYPLDQSTNGSHYGDGATQSTFEASGS--LPPMPSTFD--------DMPSVSNKPANSN 467 L + L Q T SHY G T S S S L PST + PS S ANS+ Sbjct: 144 LLFDLTQDTGLSHYQGGPTLSMAGMSESSFLSKRPSTSEVNNVNPKKPKPSESVSGANSS 203 Query: 466 CLNPTMKDP 440 + P++K P Sbjct: 204 AVLPSVKSP 212
>COQ5_RAT (Q4G064) Ubiquinone biosynthesis methyltransferase COQ5,| mitochondrial precursor (EC 2.1.1.-) Length = 327 Score = 30.0 bits (66), Expect = 7.3 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +2 Query: 419 KSCCLREWVFHGWVQAIGVCRLIGNRR 499 +SC L + HGW + G CRL G RR Sbjct: 5 RSCVLWSYCGHGWSRLAGDCRLPGFRR 31
>FABH_RHIME (Q92QT4) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) Length = 323 Score = 29.6 bits (65), Expect = 9.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 602 QWVLQKLIVWHRQIIGEGSTSQIIGEGFTR 691 +W++Q+ + R I GEG TS +GE R Sbjct: 32 EWIVQRTGIRQRYIAGEGETSASLGEAAAR 61
>WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A| Length = 405 Score = 29.6 bits (65), Expect = 9.6 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -2 Query: 657 EPSPMICLCQTISFCSTHWINQLMAVT-TVMVLLNQLLKQVDRFHQCL 517 EP I + QT++ H + QL +T TV +L +L DR QCL Sbjct: 346 EPQESISMPQTLTSTLEHIVGQLDILTQTVSILEQRLTLTEDRLKQCL 393
>CDS2_RAT (Q91XU8) Phosphatidate cytidylyltransferase 2 (EC 2.7.7.41)| (CDP-diglyceride synthetase 2) (CDP-diglyceride pyrophosphorylase 2) (CDP-diacylglycerol synthase 2) (CDS 2) (CTP:phosphatidate cytidylyltransferase 2) (CDP-DAG synthase 2) (CDP-DG synt Length = 443 Score = 29.6 bits (65), Expect = 9.6 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = -1 Query: 607 PLDQSTNGSHYGDGATQSTFEASGSLPPMPSTFDDMPSVSNK 482 P D+ + DG T S E+ P P++ DD P V N+ Sbjct: 15 PEDKESESEAKLDGETASDSESRAETAPPPTSIDDTPEVLNR 56 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,977,920 Number of Sequences: 219361 Number of extensions: 1846422 Number of successful extensions: 5202 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4986 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5197 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7252940416 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)