ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1e14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009593.1| Triticum aestivum clone wre1n.pk0062.g6:fis, full... 535 e-149
2ref|XM_464773.1| Oryza sativa (japonica cultivar-group), mRNA 176 4e-41
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 176 4e-41
4dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic D... 176 4e-41
5dbj|AK120560.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
6dbj|AK099716.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
7gb|AY105508.1| Zea mays PCO114533 mRNA sequence 143 5e-31
8gb|AY165599.1| Saccharum hybrid cultivar putative sugar transpor... 119 8e-24
9emb|AJ534446.1|HVU534446 Hordeum vulgare mRNA for sugar transpor... 90 7e-15
10emb|AJ534445.1|HVU534445 Hordeum vulgare mRNA for hexose transpo... 90 7e-15
11ref|NM_197573.1| Oryza sativa (japonica cultivar-group) putative... 52 0.002
12gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 geno... 52 0.002
13dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
14dbj|AK102640.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
15dbj|AK067391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
16dbj|AK065191.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
17dbj|AK059705.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
18gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
19ref|NM_115008.1| Arabidopsis thaliana carbohydrate transporter/ ... 48 0.024
20emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, B... 48 0.024
21emb|AJ532571.1|ATH532571 Arabidopsis thaliana mRNA for monosacch... 48 0.024
22gb|AC125452.7| Mus musculus, clone RP23-43F6, complete sequence 44 0.37
23emb|BX828912.1|CNS0A3H4 Arabidopsis thaliana Full-length cDNA Co... 44 0.37
24dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 44 0.37
25ref|NM_006536.4| Homo sapiens chloride channel, calcium activate... 42 1.5
26gb|AC119749.2| Homo sapiens chromosome 1 clone RP11-444C12, comp... 42 1.5
27gb|AC016967.24| Homo sapiens 3 BAC RP11-72E23 (Roswell Park Canc... 42 1.5
28gb|BC041096.1| Homo sapiens chloride channel, calcium activated,... 42 1.5
29gb|AF127980.1|AF127980 Homo sapiens calcium-activated chloride c... 42 1.5
30gb|AF043977.1|AF043977 Homo sapiens calcium-activated chloride c... 42 1.5
31dbj|AB026833.1| Homo sapiens mRNA for chloride channel protein, ... 42 1.5
32gb|AC002038.1|HUAC002038 Homo sapiens chromosome 2 clone 101B6 m... 40 5.8
33ref|NM_179234.1| Arabidopsis thaliana carbohydrate transporter/ ... 40 5.8
34ref|NM_119696.4| Arabidopsis thaliana carbohydrate transporter/ ... 40 5.8
35gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CI... 40 5.8
36gb|AC114823.4| Mus musculus BAC clone RP23-209L10 from 2, comple... 40 5.8
37emb|AL359984.5| Human DNA sequence from clone RP11-179J15 on chr... 40 5.8
38emb|AL022476.2|HS323M22 Human DNA sequence from clone RP3-323M22... 40 5.8
39emb|BX044541.1|CNS096J5 Single read from an extremity of a full-... 40 5.8
40gb|AC133916.2| Homo sapiens chromosome 16 clone RP11-135K11, com... 40 5.8
41gb|AC138915.2| Homo sapiens chromosome 16 clone RP11-626K17, com... 40 5.8
42gb|AC138511.2| Homo sapiens chromosome 16 clone RP11-22F7, compl... 40 5.8
43emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, ... 40 5.8
44emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, B... 40 5.8
45emb|AJ628407.1| Thylamys pusilla partial ttr gene for transthyre... 40 5.8
46gb|AC113435.14| Pan troglodytes clone rp43-153p22, complete sequ... 40 5.8
47gb|AC123980.19| Pan troglodytes clone rp43-118j16, complete sequ... 40 5.8
48gb|AY094465.1| Arabidopsis thaliana AT4g35300/F23E12_140 mRNA, c... 40 5.8
49gb|U21323.1| Caenorhabditis elegans cosmid C45G9, complete sequence 40 5.8
50ref|NM_065671.3| Caenorhabditis elegans C45G9.5 (C45G9.5) mRNA, ... 40 5.8
51gb|AC134305.3| Homo sapiens chromosome 16 clone RP11-105I8, comp... 40 5.8
52gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, comp... 40 5.8
53gb|AC127391.4| Homo sapiens BAC clone RP11-389I13 from 2, comple... 40 5.8
54gb|AC137499.2| Homo sapiens chromosome 16 clone RP11-317D10, com... 40 5.8
55gb|AC136433.3| Homo sapiens chromosome 16 clone RP11-21C14, comp... 40 5.8
56gb|AC011449.6|AC011449 Homo sapiens chromosome 19 clone CTC-263F... 40 5.8
57emb|AJ532570.1|ATH532570 Arabidopsis thaliana mRNA for monosacch... 40 5.8
58gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, com... 40 5.8
59gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, com... 40 5.8
60emb|AL845500.6| Mouse DNA sequence from clone RP23-221K3 on chro... 40 5.8
61dbj|AP000545.1| Homo sapiens genomic DNA, chromosome 22q11.2, Ca... 40 5.8
62dbj|AP000544.1| Homo sapiens genomic DNA, chromosome 22q11.2, Ca... 40 5.8 
>gb|BT009593.1| Triticum aestivum clone wre1n.pk0062.g6:fis, full insert mRNA
            sequence
          Length = 1315

 Score =  535 bits (270), Expect = e-149
 Identities = 383/419 (91%), Gaps = 9/419 (2%)
 Strand = Plus / Minus

                                                                        
Query: 25   aatagacaatgaaatgggggcatgaaatccttctacttttacagcttcca-ttcctcatg 83
            ||||||| ||||||||||||||||| ||||| |||||||||||||||||  |||||| ||
Sbjct: 1056 aatagacgatgaaatgggggcatgagatcctcctacttttacagcttcccgttcctcgtg 997

                                                                        
Query: 84   atgaattctttgggtagttatctcatttacaactcaaa-gtttttccgttcctcacgagg 142
            ||||  ||||||||||| | |||||||||||||||||| |||||||||||||||||||||
Sbjct: 996  atgagctctttgggtagctgtctcatttacaactcaaaagtttttccgttcctcacgagg 937

                                                                        
Query: 143  atccgtccaatttgcaattttcagtgcag-------tgtgcaaactgaaagcaaagcttc 195
            | |||||||||||||||||||||| ||||       |||||||||||||| ||||||| |
Sbjct: 936  acccgtccaatttgcaattttcagcgcagaccgcagtgtgcaaactgaaaacaaagctcc 877

                                                                        
Query: 196  atggcaaatcaggcaatggtggcctgcgcttgctttgccccaaccgcaaagaactcggtg 255
            |||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 876  atgatgaatcaggcaatggtggcctgcgcttgcttcgccccaaccgcaaagaactcggtg 817

                                                                        
Query: 256  atgacctcgaggggcataccctttgtctctgggacctttaggtagacgaacacaaaggcg 315
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 816  atgacctcgaggggcatgccctttgtctctgggacctttaggtagacgaacacaaaggca 757

                                                                        
Query: 316  atgcagcaaacgattgcatatataccaaagacacctgccaggccaatagcattcagnatc 375
            ||||||||||||| ||||||||||||||||||||| || || |||||||||||||| |||
Sbjct: 756  atgcagcaaacgactgcatatataccaaagacacccgctagaccaatagcattcagcatc 697

                                                                       
Query: 376  acaggtaggctgtaggtaacaattatgtcacaaatccagaatgtgagagcgcaaatagc 434
            ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 696  acaggcaggctgtaggtaacaataatgtcacaaatccagaatgtgagggcgcaaatagc 638
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>ref|XM_464773.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2934

 Score =  176 bits (89), Expect = 4e-41
 Identities = 175/204 (85%)
 Strand = Plus / Minus

                                                                        
Query: 225  ttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctc 284
            ||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 2509 ttgctttgcaccaacagcgaagaactcggtgatgacttcgagcggcatgcccttcgtctc 2450

                                                                        
Query: 285  tgggacctttaggtagacgaacacaaaggcgatgcagcaaacgattgcatatataccaaa 344
             |||||||| ||| |||||||||| ||||| ||  ||||||| | ||| |||||||||||
Sbjct: 2449 ggggaccttgaggaagacgaacacgaaggcaatcgagcaaacaactgcgtatataccaaa 2390

                                                                        
Query: 345  gacacctgccaggccaatagcattcagnatcacaggtaggctgtaggtaacaattatgtc 404
            ||||||||| ||||| || |||||||| |||||||| ||||||||||| || || || ||
Sbjct: 2389 gacacctgctaggccgatggcattcagcatcacagggaggctgtaggtgactatgatatc 2330

                                    
Query: 405  acaaatccagaatgtgagagcgca 428
            || |||||||||||| || |||||
Sbjct: 2329 accaatccagaatgtcagggcgca 2306
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  176 bits (89), Expect = 4e-41
 Identities = 175/204 (85%)
 Strand = Plus / Minus

                                                                           
Query: 225     ttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctc 284
               ||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 7276917 ttgctttgcaccaacagcgaagaactcggtgatgacttcgagcggcatgcccttcgtctc 7276858

                                                                           
Query: 285     tgggacctttaggtagacgaacacaaaggcgatgcagcaaacgattgcatatataccaaa 344
                |||||||| ||| |||||||||| ||||| ||  ||||||| | ||| |||||||||||
Sbjct: 7276857 ggggaccttgaggaagacgaacacgaaggcaatcgagcaaacaactgcgtatataccaaa 7276798

                                                                           
Query: 345     gacacctgccaggccaatagcattcagnatcacaggtaggctgtaggtaacaattatgtc 404
               ||||||||| ||||| || |||||||| |||||||| ||||||||||| || || || ||
Sbjct: 7276797 gacacctgctaggccgatggcattcagcatcacagggaggctgtaggtgactatgatatc 7276738

                                       
Query: 405     acaaatccagaatgtgagagcgca 428
               || |||||||||||| || |||||
Sbjct: 7276737 accaatccagaatgtcagggcgca 7276714
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>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0035N08
          Length = 136267

 Score =  176 bits (89), Expect = 4e-41
 Identities = 175/204 (85%)
 Strand = Plus / Minus

                                                                         
Query: 225   ttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctc 284
             ||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 52725 ttgctttgcaccaacagcgaagaactcggtgatgacttcgagcggcatgcccttcgtctc 52666

                                                                         
Query: 285   tgggacctttaggtagacgaacacaaaggcgatgcagcaaacgattgcatatataccaaa 344
              |||||||| ||| |||||||||| ||||| ||  ||||||| | ||| |||||||||||
Sbjct: 52665 ggggaccttgaggaagacgaacacgaaggcaatcgagcaaacaactgcgtatataccaaa 52606

                                                                         
Query: 345   gacacctgccaggccaatagcattcagnatcacaggtaggctgtaggtaacaattatgtc 404
             ||||||||| ||||| || |||||||| |||||||| ||||||||||| || || || ||
Sbjct: 52605 gacacctgctaggccgatggcattcagcatcacagggaggctgtaggtgactatgatatc 52546

                                     
Query: 405   acaaatccagaatgtgagagcgca 428
             || |||||||||||| || |||||
Sbjct: 52545 accaatccagaatgtcagggcgca 52522
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>dbj|AK120560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132C18, full
            insert sequence
          Length = 2934

 Score =  176 bits (89), Expect = 4e-41
 Identities = 175/204 (85%)
 Strand = Plus / Minus

                                                                        
Query: 225  ttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctc 284
            ||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 2508 ttgctttgcaccaacagcgaagaactcggtgatgacttcgagcggcatgcccttcgtctc 2449

                                                                        
Query: 285  tgggacctttaggtagacgaacacaaaggcgatgcagcaaacgattgcatatataccaaa 344
             |||||||| ||| |||||||||| ||||| ||  ||||||| | ||| |||||||||||
Sbjct: 2448 ggggaccttgaggaagacgaacacgaaggcaatcgagcaaacaactgcgtatataccaaa 2389

                                                                        
Query: 345  gacacctgccaggccaatagcattcagnatcacaggtaggctgtaggtaacaattatgtc 404
            ||||||||| ||||| || |||||||| |||||||| ||||||||||| || || || ||
Sbjct: 2388 gacacctgctaggccgatggcattcagcatcacagggaggctgtaggtgactatgatatc 2329

                                    
Query: 405  acaaatccagaatgtgagagcgca 428
            || |||||||||||| || |||||
Sbjct: 2328 accaatccagaatgtcagggcgca 2305
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>dbj|AK099716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086B19, full
            insert sequence
          Length = 2378

 Score =  176 bits (89), Expect = 4e-41
 Identities = 175/204 (85%)
 Strand = Plus / Minus

                                                                        
Query: 225  ttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctc 284
            ||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 2019 ttgctttgcaccaacagcgaagaactcggtgatgacttcgagcggcatgcccttcgtctc 1960

                                                                        
Query: 285  tgggacctttaggtagacgaacacaaaggcgatgcagcaaacgattgcatatataccaaa 344
             |||||||| ||| |||||||||| ||||| ||  ||||||| | ||| |||||||||||
Sbjct: 1959 ggggaccttgaggaagacgaacacgaaggcaatcgagcaaacaactgcgtatataccaaa 1900

                                                                        
Query: 345  gacacctgccaggccaatagcattcagnatcacaggtaggctgtaggtaacaattatgtc 404
            ||||||||| ||||| || |||||||| |||||||| ||||||||||| || || || ||
Sbjct: 1899 gacacctgctaggccgatggcattcagcatcacagggaggctgtaggtgactatgatatc 1840

                                    
Query: 405  acaaatccagaatgtgagagcgca 428
            || |||||||||||| || |||||
Sbjct: 1839 accaatccagaatgtcagggcgca 1816
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>gb|AY105508.1| Zea mays PCO114533 mRNA sequence
          Length = 2180

 Score =  143 bits (72), Expect = 5e-31
 Identities = 146/171 (85%)
 Strand = Plus / Minus

                                                                        
Query: 222  cgcttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgt 281
            ||||||||| || ||||| |||||||| ||||| || ||||| |||||||| ||||||||
Sbjct: 1822 cgcttgcttcgcaccaactgcaaagaattcggtaataacctcaaggggcatcccctttgt 1763

                                                                        
Query: 282  ctctgggacctttaggtagacgaacacaaaggcgatgcagcaaacgattgcatatatacc 341
            ||| |||||||| ||| |||||||||||||||  ||  |||| |||| ||||||||| | 
Sbjct: 1762 ctcagggaccttaaggaagacgaacacaaaggaaatcaagcatacgactgcatatatgct 1703

                                                               
Query: 342  aaagacacctgccaggccaatagcattcagnatcacaggtaggctgtaggt 392
             || ||||| ||||| |||||||||||||| |||||||| |||||||||||
Sbjct: 1702 gaaaacacccgccagtccaatagcattcagcatcacaggaaggctgtaggt 1652
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>gb|AY165599.1| Saccharum hybrid cultivar putative sugar transporter type 2a mRNA,
            complete cds
          Length = 2665

 Score =  119 bits (60), Expect = 8e-24
 Identities = 152/183 (83%)
 Strand = Plus / Minus

                                                                        
Query: 222  cgcttgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgt 281
            |||||||||||| ||||| ||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 2319 cgcttgctttgcaccaactgcaaagaactcagtgatgacctcaaggggcatgccctttgt 2260

                                                                        
Query: 282  ctctgggacctttaggtagacgaacacaaaggcgatgcagcaaacgattgcatatatacc 341
            ||| || ||||| || ||||| ||||||||||| |||   ||  | | ||| ||||| ||
Sbjct: 2259 ctccggaaccttaagatagacaaacacaaaggcaatggcacaggcaactgcgtatatgcc 2200

                                                                        
Query: 342  aaagacacctgccaggccaatagcattcagnatcacaggtaggctgtaggtaacaattat 401
            ||| || ||| | || |||||||||||||| |||||||| || ||||| || ||||| ||
Sbjct: 2199 aaacacgccttctagaccaatagcattcagcatcacaggaagactgtatgtgacaataat 2140

               
Query: 402  gtc 404
            |||
Sbjct: 2139 gtc 2137
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>emb|AJ534446.1|HVU534446 Hordeum vulgare mRNA for sugar transporter (stp2 gene)
          Length = 2516

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                        
Query: 226  tgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctct 285
            ||||| ||||| ||||  |||||||||||||||||||| |||||||| ||||||||||| 
Sbjct: 2229 tgcttcgccccgaccgagaagaactcggtgatgacctccaggggcatgccctttgtctca 2170

                                         
Query: 286  gggacctttaggtagacgaacacaaaggc 314
            |||||||| | ||||||||| || |||||
Sbjct: 2169 gggaccttcatgtagacgaatacgaaggc 2141
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>emb|AJ534445.1|HVU534445 Hordeum vulgare mRNA for hexose transporter (stp1 gene)
          Length = 2614

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                        
Query: 226  tgctttgccccaaccgcaaagaactcggtgatgacctcgaggggcataccctttgtctct 285
            ||||| ||||| ||||  |||||||||||||||||||| |||||||| ||||||||||| 
Sbjct: 2292 tgcttcgccccgaccgagaagaactcggtgatgacctccaggggcatgccctttgtctca 2233

                                         
Query: 286  gggacctttaggtagacgaacacaaaggc 314
            |||||||| | ||||||||| || |||||
Sbjct: 2232 gggaccttcatgtagacgaatacgaaggc 2204
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>ref|NM_197573.1| Oryza sativa (japonica cultivar-group) putative sugar transporter
            (OSJNBb0064P21.3), mRNA
          Length = 2438

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 244  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 293
            ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 2362 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 2313
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>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete
             sequence
          Length = 142114

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 244   aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 293
             ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 38269 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 38220
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 244      aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 293
                ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 20532979 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 20532930
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>dbj|AK102640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100A10, full
            insert sequence
          Length = 2800

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 244  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 293
            ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 2393 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 2344
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>dbj|AK067391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106M11, full
            insert sequence
          Length = 1564

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 244  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 293
            ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 1203 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 1154
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>dbj|AK065191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E10, full
            insert sequence
          Length = 2368

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 244  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 293
            ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 2030 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 1981
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>dbj|AK059705.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D08, full
            insert sequence
          Length = 1625

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 244  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 293
            ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 1218 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 1169
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 244      aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctt 293
                ||||||||||||||||| || || ||||| ||||||||||| || |||||
Sbjct: 20544251 aagaactcggtgatgacttcaagaggcatgccctttgtctccggcacctt 20544202
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>ref|NM_115008.1| Arabidopsis thaliana carbohydrate transporter/ nucleoside
            transporter/ sugar porter AT3G51490 mRNA, complete cds
          Length = 2190

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 244  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctttaggta 299
            |||||||| | ||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 2135 aagaactcagagataacttcaaggggcattccctttgtctctggtaccttgaggta 2080
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>emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, BAC clone F26O13
          Length = 94349

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 244   aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctttaggta 299
             |||||||| | ||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 50794 aagaactcagagataacttcaaggggcattccctttgtctctggtaccttgaggta 50849
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>emb|AJ532571.1|ATH532571 Arabidopsis thaliana mRNA for monosaccharide sensing protein 3 (mssp3
            gene)
          Length = 2190

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 244  aagaactcggtgatgacctcgaggggcataccctttgtctctgggacctttaggta 299
            |||||||| | ||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 2135 aagaactcagagataacttcaaggggcattccctttgtctctggtaccttgaggta 2080
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>gb|AC125452.7| Mus musculus, clone RP23-43F6, complete sequence
          Length = 162045

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 7     acaacaactaatacaagaaata 28
             ||||||||||||||||||||||
Sbjct: 70278 acaacaactaatacaagaaata 70257
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>emb|BX828912.1|CNS0A3H4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL50ZE01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1135

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 90/113 (79%)
 Strand = Plus / Minus

                                                                       
Query: 316 atgcagcaaacgattgcatatataccaaagacacctgccaggccaatagcattcagnatc 375
           ||||| ||||||||||| || || ||||| ||||| || || ||||| |  || || | |
Sbjct: 959 atgcaacaaacgattgcgtacattccaaacacaccagctagtccaatggatttgagcagc 900

                                                                
Query: 376 acaggtaggctgtaggtaacaattatgtcacaaatccagaatgtgagagcgca 428
           || || || ||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 899 acggggagactgtaagtgacgattatgtcacagatccagaaggtgagtgcgca 847
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>dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-689N19, complete
              sequence
          Length = 194140

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 44     gcatgaaatccttctactttta 65
              ||||||||||||||||||||||
Sbjct: 135207 gcatgaaatccttctactttta 135228
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>ref|NM_006536.4| Homo sapiens chloride channel, calcium activated, family member 2
            (CLCA2), mRNA
          Length = 4007

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 54   cttctacttttacagcttcca 74
            |||||||||||||||||||||
Sbjct: 2441 cttctacttttacagcttcca 2421
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>gb|AC119749.2| Homo sapiens chromosome 1 clone RP11-444C12, complete sequence
          Length = 152000

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 54    cttctacttttacagcttcca 74
             |||||||||||||||||||||
Sbjct: 69215 cttctacttttacagcttcca 69195
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>gb|AC016967.24| Homo sapiens 3 BAC RP11-72E23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 140971

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     gcatgaaatccttctactttt 64
              |||||||||||||||||||||
Sbjct: 129763 gcatgaaatccttctactttt 129783
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>gb|BC041096.1| Homo sapiens chloride channel, calcium activated, family member 2,
            mRNA (cDNA clone MGC:46036 IMAGE:5752653), complete cds
          Length = 3964

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 54   cttctacttttacagcttcca 74
            |||||||||||||||||||||
Sbjct: 2398 cttctacttttacagcttcca 2378
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>gb|AF127980.1|AF127980 Homo sapiens calcium-activated chloride channel protein 3 (CaCC3)
            mRNA, complete cds
          Length = 2832

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 54   cttctacttttacagcttcca 74
            |||||||||||||||||||||
Sbjct: 2335 cttctacttttacagcttcca 2315
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>gb|AF043977.1|AF043977 Homo sapiens calcium-activated chloride channel-2 (hCLCA2) mRNA,
            complete cds
          Length = 2970

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 54   cttctacttttacagcttcca 74
            |||||||||||||||||||||
Sbjct: 2443 cttctacttttacagcttcca 2423
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>dbj|AB026833.1| Homo sapiens mRNA for chloride channel protein, complete cds
          Length = 3604

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 54   cttctacttttacagcttcca 74
            |||||||||||||||||||||
Sbjct: 2376 cttctacttttacagcttcca 2356
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>gb|AC002038.1|HUAC002038 Homo sapiens chromosome 2 clone 101B6 map 2p11, complete sequence
          Length = 161973

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   cacaaatccagaatgtgaga 423
             ||||||||||||||||||||
Sbjct: 73859 cacaaatccagaatgtgaga 73840
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>ref|NM_179234.1| Arabidopsis thaliana carbohydrate transporter/ nucleoside
            transporter/ sugar porter AT4G35300 transcript variant
            AT4G35300.1 mRNA, complete cds
          Length = 2590

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 397  attatgtcacaaatccagaatgtgagagcgca 428
            ||||||||||| |||||||| ||||| |||||
Sbjct: 2218 attatgtcacagatccagaaggtgagtgcgca 2187
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>ref|NM_119696.4| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT4G35300
            transcript variant AT4G35300.2 mRNA, complete cds
          Length = 2591

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 397  attatgtcacaaatccagaatgtgagagcgca 428
            ||||||||||| |||||||| ||||| |||||
Sbjct: 2219 attatgtcacagatccagaaggtgagtgcgca 2188
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>gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CIT987-SK37914  ~complete genomic
             sequence, complete sequence
          Length = 161580

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   cacaaatccagaatgtgaga 423
             ||||||||||||||||||||
Sbjct: 26156 cacaaatccagaatgtgaga 26137
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>gb|AC114823.4| Mus musculus BAC clone RP23-209L10 from 2, complete sequence
          Length = 170884

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     ctaatacaagaaatagacaa 33
              ||||||||||||||||||||
Sbjct: 125919 ctaatacaagaaatagacaa 125900
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>emb|AL359984.5| Human DNA sequence from clone RP11-179J15 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 62109

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    atgaaatccttctactttta 65
             ||||||||||||||||||||
Sbjct: 49803 atgaaatccttctactttta 49784
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>emb|AL022476.2|HS323M22 Human DNA sequence from clone RP3-323M22 on chromosome 22, complete
             sequence
          Length = 194523

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 10    acaactaatacaagaaatagacaa 33
             ||||||||||||||||| ||||||
Sbjct: 67421 acaactaatacaagaaacagacaa 67398
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>emb|BX044541.1|CNS096J5 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC18BB09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 964

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 39  tgggggcatgaaatccttct 58
           ||||||||||||||||||||
Sbjct: 391 tgggggcatgaaatccttct 410
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>gb|AC133916.2| Homo sapiens chromosome 16 clone RP11-135K11, complete sequence
          Length = 169142

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   cacaaatccagaatgtgaga 423
             ||||||||||||||||||||
Sbjct: 74881 cacaaatccagaatgtgaga 74862
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>gb|AC138915.2| Homo sapiens chromosome 16 clone RP11-626K17, complete sequence
          Length = 180893

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   cacaaatccagaatgtgaga 423
             ||||||||||||||||||||
Sbjct: 96376 cacaaatccagaatgtgaga 96357
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>gb|AC138511.2| Homo sapiens chromosome 16 clone RP11-22F7, complete sequence
          Length = 149037

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   cacaaatccagaatgtgaga 423
             ||||||||||||||||||||
Sbjct: 89153 cacaaatccagaatgtgaga 89172
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>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83
          Length = 197859

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 397   attatgtcacaaatccagaatgtgagagcgca 428
             ||||||||||| |||||||| ||||| |||||
Sbjct: 61244 attatgtcacagatccagaaggtgagtgcgca 61275
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>emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, BAC clone  F23E12 (ESSA project)
          Length = 86710

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 397   attatgtcacaaatccagaatgtgagagcgca 428
             ||||||||||| |||||||| ||||| |||||
Sbjct: 42107 attatgtcacagatccagaaggtgagtgcgca 42076
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>emb|AJ628407.1| Thylamys pusilla partial ttr gene for transthyretin, intron 1
          Length = 1656

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 46  atgaaatccttctacttttacagc 69
           |||||||||||||| |||||||||
Sbjct: 775 atgaaatccttctaattttacagc 752
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>gb|AC113435.14| Pan troglodytes clone rp43-153p22, complete sequence
          Length = 161703

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    cacaaatccagaatgtgaga 423
              ||||||||||||||||||||
Sbjct: 105930 cacaaatccagaatgtgaga 105949
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>gb|AC123980.19| Pan troglodytes clone rp43-118j16, complete sequence
          Length = 145016

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    cacaaatccagaatgtgaga 423
              ||||||||||||||||||||
Sbjct: 123073 cacaaatccagaatgtgaga 123054
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>gb|AY094465.1| Arabidopsis thaliana AT4g35300/F23E12_140 mRNA, complete cds
          Length = 2570

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 397  attatgtcacaaatccagaatgtgagagcgca 428
            ||||||||||| |||||||| ||||| |||||
Sbjct: 2232 attatgtcacagatccagaaggtgagtgcgca 2201
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>gb|U21323.1| Caenorhabditis elegans cosmid C45G9, complete sequence
          Length = 40293

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   cacgaggatccgtccaattt 155
             ||||||||||||||||||||
Sbjct: 14105 cacgaggatccgtccaattt 14086
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>ref|NM_065671.3| Caenorhabditis elegans C45G9.5 (C45G9.5) mRNA, complete cds
          Length = 1192

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 136 cacgaggatccgtccaattt 155
           ||||||||||||||||||||
Sbjct: 906 cacgaggatccgtccaattt 887
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>gb|AC134305.3| Homo sapiens chromosome 16 clone RP11-105I8, complete sequence
          Length = 165873

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   cacaaatccagaatgtgaga 423
             ||||||||||||||||||||
Sbjct: 89699 cacaaatccagaatgtgaga 89680
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>gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, complete sequence
          Length = 196550

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    cacaaatccagaatgtgaga 423
              ||||||||||||||||||||
Sbjct: 179611 cacaaatccagaatgtgaga 179630
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>gb|AC127391.4| Homo sapiens BAC clone RP11-389I13 from 2, complete sequence
          Length = 174893

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   cacaaatccagaatgtgaga 423
             ||||||||||||||||||||
Sbjct: 50033 cacaaatccagaatgtgaga 50014
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>gb|AC137499.2| Homo sapiens chromosome 16 clone RP11-317D10, complete sequence
          Length = 159831

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   cacaaatccagaatgtgaga 423
             ||||||||||||||||||||
Sbjct: 92471 cacaaatccagaatgtgaga 92490
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>gb|AC136433.3| Homo sapiens chromosome 16 clone RP11-21C14, complete sequence
          Length = 164765

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   cacaaatccagaatgtgaga 423
             ||||||||||||||||||||
Sbjct: 61065 cacaaatccagaatgtgaga 61046
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>gb|AC011449.6|AC011449 Homo sapiens chromosome 19 clone CTC-263F14, complete sequence
          Length = 120099

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 8     caacaactaatacaagaaatagacaatg 35
             ||||||||||||||||||| ||| ||||
Sbjct: 40887 caacaactaatacaagaaaaagaaaatg 40914
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>emb|AJ532570.1|ATH532570 Arabidopsis thaliana mRNA for monosaccharide sensing protein 2 (mssp2
            gene)
          Length = 2190

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 397  attatgtcacaaatccagaatgtgagagcgca 428
            ||||||||||| |||||||| ||||| |||||
Sbjct: 1994 attatgtcacagatccagaaggtgagtgcgca 1963
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>gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, complete sequence
          Length = 184294

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    cacaaatccagaatgtgaga 423
              ||||||||||||||||||||
Sbjct: 163274 cacaaatccagaatgtgaga 163293
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>gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, complete sequence
          Length = 161397

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   cacaaatccagaatgtgaga 423
             ||||||||||||||||||||
Sbjct: 30489 cacaaatccagaatgtgaga 30470
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>emb|AL845500.6| Mouse DNA sequence from clone RP23-221K3 on chromosome 2, complete
             sequence
          Length = 204459

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    ctaatacaagaaatagacaa 33
             ||||||||||||||||||||
Sbjct: 24552 ctaatacaagaaatagacaa 24533
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>dbj|AP000545.1| Homo sapiens genomic DNA, chromosome 22q11.2, Cat Eye Syndrome
            region, clone:c68B10
          Length = 37247

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 404  cacaaatccagaatgtgaga 423
            ||||||||||||||||||||
Sbjct: 2247 cacaaatccagaatgtgaga 2266
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>dbj|AP000544.1| Homo sapiens genomic DNA, chromosome 22q11.2, Cat Eye Syndrome region,
             clone c17H1
          Length = 38993

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   cacaaatccagaatgtgaga 423
             ||||||||||||||||||||
Sbjct: 36903 cacaaatccagaatgtgaga 36922


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,782,997
Number of Sequences: 3902068
Number of extensions: 3782997
Number of successful extensions: 71243
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71139
Number of HSP's gapped (non-prelim): 101
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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