| Clone Name | rbags1e12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 577 agcagctaaacctttcaccgcaaagaaggccccgtaagtgaaacaaataccccaagt 633 ||||||||| ||||| || |||||||| | ||| ||||||||||| ||||||||||| Sbjct: 16194062 agcagctaatccttttacagcaaagaatgtcccataagtgaaacatataccccaagt 16194118
>dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026F02 Length = 132237 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 577 agcagctaaacctttcaccgcaaagaaggccccgtaagtgaaacaaataccccaagt 633 ||||||||| ||||| || |||||||| | ||| ||||||||||| ||||||||||| Sbjct: 18954 agcagctaatccttttacagcaaagaatgtcccataagtgaaacatataccccaagt 19010
>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0040M10 Length = 162790 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 577 agcagctaaacctttcaccgcaaagaaggccccgtaagtgaaacaaataccccaagt 633 ||||||||| ||||| || |||||||| | ||| ||||||||||| ||||||||||| Sbjct: 98855 agcagctaatccttttacagcaaagaatgtcccataagtgaaacatataccccaagt 98911
>dbj|AK120065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B12, full insert sequence Length = 5191 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 577 agcagctaaacctttcaccgcaaagaaggccccgtaagtgaaacaaataccccaagt 633 ||||||||| ||||| || |||||||| | ||| ||||||||||| ||||||||||| Sbjct: 2772 agcagctaatccttttacagcaaagaatgtcccataagtgaaacatataccccaagt 2716
>gb|AC105768.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1122_B08, complete sequence Length = 143955 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 305 tgttggggaaactctcccgagtctagctgcatattcatcaatagttttgccgcacgatat 364 ||||| |||||||| |||| ||||| |||||||| |||||| |||||| ||| ||||| Sbjct: 22659 tgttgtggaaactcgcccgtttctagttgcatattaatcaattcttttgctgcatgatat 22718 Query: 365 agtggc 370 |||||| Sbjct: 22719 agtggc 22724 Score = 42.1 bits (21), Expect = 2.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 462 cctcggtttcaatggaaagatagctttcgccccatccacctgtactctgttgtttggaca 521 ||||||||||| | ||||| || | || ||||||||||||||||| ||||||| |||| Sbjct: 28393 cctcggtttcacttgaaaggtatgtctctccccatccacctgtactaagttgttttgaca 28452 Query: 522 a 522 | Sbjct: 28453 a 28453 Score = 40.1 bits (20), Expect = 9.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 647 ccattctttctttgtttgttctcaatgtatgtagcagcattttttatacatttttctatc 706 |||| ||| ||||||||||||||||| | | | ||||||||| ||||||||| | ||| Sbjct: 28663 ccatccttcctttgtttgttctcaataaacttggaagcatttttaatacattttccaatc 28722 Query: 707 tctt 710 |||| Sbjct: 28723 tctt 28726 Score = 40.1 bits (20), Expect = 9.8 Identities = 65/80 (81%) Strand = Plus / Plus Query: 554 ctattatcataagtccttcccgaagcagctaaacctttcaccgcaaagaaggccccgtaa 613 ||||| ||||| || ||||| | |||| |||| ||||| | |||||||| | || ||| Sbjct: 28485 ctattttcatatgttcttccagcagcaactaatccttttatggcaaagaatgttccataa 28544 Query: 614 gtgaaacaaataccccaagt 633 |||||||| ||||||||||| Sbjct: 28545 gtgaaacatataccccaagt 28564
>gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1384_A02, complete sequence Length = 100251 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 305 tgttggggaaactctcccgagtctagctgcatattcatcaatagttttgccgcacgatat 364 ||||| |||||||| |||| ||||| |||||||| |||||| |||||| ||| ||||| Sbjct: 98103 tgttgtggaaactcgcccgtttctagttgcatattaatcaattcttttgctgcatgatat 98162 Query: 365 agtggc 370 |||||| Sbjct: 98163 agtggc 98168
>gb|AY618699.1| Avena strigosa strain CI3815 beta-amyrin synthase gene, complete cds Length = 2274 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 293 cccatgtgttcctgttggggaaactctcccgagtctagctgcatattcat 342 |||||||||||||||||||| || || || | ||||||||||||||||| Sbjct: 2168 cccatgtgttcctgttgggggaagtcacctgtttctagctgcatattcat 2119
>gb|AY618698.1| Avena prostrata strain CC7060 beta-amyrin synthase gene, complete cds Length = 2274 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 293 cccatgtgttcctgttggggaaactctcccgagtctagctgcatattcat 342 |||||||||||||||||||| || || || | ||||||||||||||||| Sbjct: 2168 cccatgtgttcctgttgggggaagtcacctgtttctagctgcatattcat 2119
>emb|AJ311789.1|AST311789 Avena strigosa mRNA for beta-amyrin synthase (bAS1 gene) Length = 2274 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 293 cccatgtgttcctgttggggaaactctcccgagtctagctgcatattcat 342 |||||||||||||||||||| || || || | ||||||||||||||||| Sbjct: 2168 cccatgtgttcctgttgggggaagtcacctgtttctagctgcatattcat 2119
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 305 tgttggggaaactctcccgagtctagctgcatattcatcaatagttttgccgcacgatat 364 ||||| |||||||| |||| ||||| |||||||| |||||| |||||| ||| ||||| Sbjct: 8301615 tgttgtggaaactcgcccgtttctagttgcatattaatcaattcttttgctgcatgatat 8301674 Query: 365 agtggc 370 |||||| Sbjct: 8301675 agtggc 8301680 Score = 42.1 bits (21), Expect = 2.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 462 cctcggtttcaatggaaagatagctttcgccccatccacctgtactctgttgtttggaca 521 ||||||||||| | ||||| || | || ||||||||||||||||| ||||||| |||| Sbjct: 8307349 cctcggtttcacttgaaaggtatgtctctccccatccacctgtactaagttgttttgaca 8307408 Query: 522 a 522 | Sbjct: 8307409 a 8307409 Score = 40.1 bits (20), Expect = 9.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 647 ccattctttctttgtttgttctcaatgtatgtagcagcattttttatacatttttctatc 706 |||| ||| ||||||||||||||||| | | | ||||||||| ||||||||| | ||| Sbjct: 8307619 ccatccttcctttgtttgttctcaataaacttggaagcatttttaatacattttccaatc 8307678 Query: 707 tctt 710 |||| Sbjct: 8307679 tctt 8307682 Score = 40.1 bits (20), Expect = 9.8 Identities = 65/80 (81%) Strand = Plus / Plus Query: 554 ctattatcataagtccttcccgaagcagctaaacctttcaccgcaaagaaggccccgtaa 613 ||||| ||||| || ||||| | |||| |||| ||||| | |||||||| | || ||| Sbjct: 8307441 ctattttcatatgttcttccagcagcaactaatccttttatggcaaagaatgttccataa 8307500 Query: 614 gtgaaacaaataccccaagt 633 |||||||| ||||||||||| Sbjct: 8307501 gtgaaacatataccccaagt 8307520
>ref|XM_949259.1| Theileria annulata strain Ankara DNA polymerase I (TA20960) partial mRNA Length = 5361 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 176 gtttatcttcatcgactttgatt 198 ||||||||||||||||||||||| Sbjct: 4261 gtttatcttcatcgactttgatt 4239
>gb|AF216755.1|AF216755 Abies magnifica cycloartenol synthase (CAS1) mRNA, complete cds Length = 3057 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 385 agcctggccagcataaatcaatgcaagcattgcccatgc 423 |||||||||||||||||| | |||||||| |||||||| Sbjct: 2581 agcctggccagcataaataagagcaagcatagcccatgc 2543
>dbj|AB055510.1| Betula platyphylla CASBPX2 mRNA for cycloartenol synthase, complete cds Length = 2514 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Minus Query: 608 ccgtaagtgaaacaaataccccaagtgccataccaagaaccat 650 ||||||||||| |||| |||||||| |||||||| ||||||| Sbjct: 2011 ccgtaagtgaagcaaacaccccaagaaccataccatgaaccat 1969
>ref|XM_629943.1| Dictyostelium discoideum hypothetical protein (DDB0185173), partial mRNA Length = 7611 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 246 tattgcggtagttgggatagtt 267 |||||||||||||||||||||| Sbjct: 7294 tattgcggtagttgggatagtt 7315
>gb|AY618700.1| Avena ventricosa strain CAV2835 beta-amyrin synthase gene, complete cds Length = 2274 Score = 44.1 bits (22), Expect = 0.63 Identities = 70/86 (81%) Strand = Plus / Minus Query: 476 gaaagatagctttcgccccatccacctgtactctgttgtttggacaataaaaattcacat 535 ||||||||| ||| ||||||||||||||| | ||||| || || || | ||||| ||| Sbjct: 1985 gaaagatagtcttcaccccatccacctgtagtttgttgctttgataagataaatttgcat 1926 Query: 536 gatttcctcatacaatcactattatc 561 |||||||| ||| || ||| |||||| Sbjct: 1925 gatttcctgatagaagcacaattatc 1900 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 617 aaacaaataccccaagtgccataccaagaaccat 650 |||||||||||||| | ||||||||| ||||||| Sbjct: 1844 aaacaaataccccatgagccataccatgaaccat 1811
>gb|AY618697.1| Avena longiglumis strain CC7250 beta-amyrin synthase gene, complete cds Length = 2274 Score = 44.1 bits (22), Expect = 0.63 Identities = 43/50 (86%) Strand = Plus / Minus Query: 293 cccatgtgttcctgttggggaaactctcccgagtctagctgcatattcat 342 |||||||||||||||||||| || || || | || |||||||||||||| Sbjct: 2168 cccatgtgttcctgttgggggaagtcacctgtttcaagctgcatattcat 2119
>gb|AY618696.1| Avena longiglumis strain CC4719 beta-amyrin synthase gene, complete cds Length = 2274 Score = 44.1 bits (22), Expect = 0.63 Identities = 43/50 (86%) Strand = Plus / Minus Query: 293 cccatgtgttcctgttggggaaactctcccgagtctagctgcatattcat 342 |||||||||||||||||||| || || || | || |||||||||||||| Sbjct: 2168 cccatgtgttcctgttgggggaagtcacctgtttcaagctgcatattcat 2119
>gb|AY618695.1| Avena clauda strain CAV5566/1 beta-amyrin synthase gene, complete cds Length = 2274 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 617 aaacaaataccccaagtgccataccaagaaccat 650 |||||||||||||| | ||||||||| ||||||| Sbjct: 1844 aaacaaataccccatgagccataccatgaaccat 1811
>ref|XM_451982.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B10175g predicted mRNA Length = 2196 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 618 aacaaataccccaagtgccataccaagaaccatt 651 |||||||||||||| ||| |||||||||||||| Sbjct: 1771 aacaaataccccaacagccgtaccaagaaccatt 1738
>gb|AC161884.5| Mus musculus BAC clone RP23-77K23 from chromosome 14, complete sequence Length = 243730 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 688 ttttatacatttttctatctct 709 |||||||||||||||||||||| Sbjct: 22690 ttttatacatttttctatctct 22669
>gb|AC115741.9| Mus musculus chromosome 14, clone RP23-476L2, complete sequence Length = 188141 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 688 ttttatacatttttctatctct 709 |||||||||||||||||||||| Sbjct: 99961 ttttatacatttttctatctct 99982
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 618 aacaaataccccaagtgccataccaagaaccatt 651 |||||||||||||| ||| |||||||||||||| Sbjct: 891308 aacaaataccccaacagccgtaccaagaaccatt 891275
>emb|AJ534950.1|DDI534950 Dictyostelium discoideum mRNA for NAD(+) ADP-ribosyltransferase-3 (adprt-3 gene) Length = 7649 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 246 tattgcggtagttgggatagtt 267 |||||||||||||||||||||| Sbjct: 7303 tattgcggtagttgggatagtt 7324
>gb|AC018781.9| Homo sapiens chromosome 8, clone RP11-302J23, complete sequence Length = 190984 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Minus Query: 123 tatactttgaaacattccaaaaccat 148 ||||||||||||||| |||||||||| Sbjct: 170311 tatactttgaaacataccaaaaccat 170286
>gb|AC093849.2| Homo sapiens BAC clone RP11-489G11 from 4, complete sequence Length = 156195 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 419 catgcagtggccactgcatgag 440 |||||||||||||||||||||| Sbjct: 20698 catgcagtggccactgcatgag 20677 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 419 catgcagtggccactgcatga 439 ||||||||||||||||||||| Sbjct: 20679 catgcagtggccactgcatga 20699
>gb|AC154469.3| Mus musculus BAC clone RP24-158M15 from chromosome 17, complete sequence Length = 151047 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 520 caataaaaattcacatgatttc 541 |||||||||||||||||||||| Sbjct: 82208 caataaaaattcacatgatttc 82187
>dbj|AK106822.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-E04, full insert sequence Length = 1720 Score = 44.1 bits (22), Expect = 0.63 Identities = 37/42 (88%) Strand = Plus / Minus Query: 298 gtgttcctgttggggaaactctcccgagtctagctgcatatt 339 |||||| ||||||||||||||||| | |||| ||||||||| Sbjct: 1361 gtgttcttgttggggaaactctcctgtttctaactgcatatt 1320 Score = 44.1 bits (22), Expect = 0.63 Identities = 79/98 (80%) Strand = Plus / Minus Query: 553 actattatcataagtccttcccgaagcagctaaacctttcaccgcaaagaaggccccgta 612 |||||| ||||| || ||||| | |||| ||| ||||| || | |||||||||||| || Sbjct: 1064 actattctcatatgttcttccagcagcaattaacccttttactgaaaagaaggccccata 1005 Query: 613 agtgaaacaaataccccaagtgccataccaagaaccat 650 ||||| || | |||||||||||| |||| ||||||| Sbjct: 1004 ggtgaagcatacaccccaagtgcctaaccatgaaccat 967
>dbj|AK070534.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062I08, full insert sequence Length = 2514 Score = 44.1 bits (22), Expect = 0.63 Identities = 64/78 (82%) Strand = Plus / Minus Query: 596 gcaaagaaggccccgtaagtgaaacaaataccccaagtgccataccaagaaccattcttt 655 |||||||| ||||| || || || || |||||||| || |||||||| || |||| ||| Sbjct: 1942 gcaaagaatgccccataggtaaagcatataccccatgtcccataccatgagccatcattt 1883 Query: 656 ctttgtttgttctcaatg 673 |||||||||||||||| Sbjct: 1882 tgttgtttgttctcaatg 1865
>emb|CT010429.11| Mouse DNA sequence from clone RP23-306H20 on chromosome 17, complete sequence Length = 191390 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 520 caataaaaattcacatgatttc 541 |||||||||||||||||||||| Sbjct: 124576 caataaaaattcacatgatttc 124597
>emb|AL670882.5| Mouse DNA sequence from clone RP23-286G19 on chromosome X, complete sequence Length = 194517 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 330 gctgcatattcatcaatagttt 351 |||||||||||||||||||||| Sbjct: 37522 gctgcatattcatcaatagttt 37501
>dbj|AP004293.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1630B3 Length = 125644 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Plus Query: 123 tatactttgaaacattccaaaaccat 148 ||||||||||||||| |||||||||| Sbjct: 112962 tatactttgaaacataccaaaaccat 112987
>ref|NM_194730.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0004A06.2), mRNA Length = 1086 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 atattcacgaacaatcaatgt 79 ||||||||||||||||||||| Sbjct: 468 atattcacgaacaatcaatgt 448
>gb|AC167246.2| Mus musculus BAC clone RP23-401H11 from chromosome 9, complete sequence Length = 160140 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 ctcccgagtctagctgcatat 338 ||||||||||||||||||||| Sbjct: 88357 ctcccgagtctagctgcatat 88377
>gb|AF521015.1| Rhizobium vitis strain F2/5 partial genomic sequence Length = 36567 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 tcaatggaaagatagctttcg 490 ||||||||||||||||||||| Sbjct: 25561 tcaatggaaagatagctttcg 25541
>gb|AC146114.3| Pan troglodytes BAC clone RP43-22O2 from 7, complete sequence Length = 176328 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 672 tgtatgtagcagcatttttta 692 ||||||||||||||||||||| Sbjct: 115147 tgtatgtagcagcatttttta 115127
>emb|AL590556.20| Human DNA sequence from clone RP11-26H16 on chromosome 1 Contains a ribosomal protein L21 (RPL21) pseudogene, the 5' end of the HSPG2 gene for heparan sulfate proteoglycan 2 (perlecan), the ELA3B gene for elastase 3B (pancreatic) and the ELA3A gene for elastase 3A (pancreatic (protease E)), complete sequence Length = 118495 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 511 ttgtttggacaataaaaattc 531 ||||||||||||||||||||| Sbjct: 33597 ttgtttggacaataaaaattc 33577
>gb|AC117472.3| Homo sapiens 3 BAC RP11-567P17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119730 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 679 agcagcattttttatacattt 699 ||||||||||||||||||||| Sbjct: 61173 agcagcattttttatacattt 61193
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 atattcacgaacaatcaatgt 79 ||||||||||||||||||||| Sbjct: 1912424 atattcacgaacaatcaatgt 1912444
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 atattcacgaacaatcaatgt 79 ||||||||||||||||||||| Sbjct: 3153 atattcacgaacaatcaatgt 3173
>gb|AC122147.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0072F04, complete sequence Length = 137724 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 atattcacgaacaatcaatgt 79 ||||||||||||||||||||| Sbjct: 130877 atattcacgaacaatcaatgt 130897
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 agttgggatagttaaagaaaa 275 ||||||||||||||||||||| Sbjct: 2584404 agttgggatagttaaagaaaa 2584424
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 atattcacgaacaatcaatgt 79 ||||||||||||||||||||| Sbjct: 1912424 atattcacgaacaatcaatgt 1912444
>dbj|AK068026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131K12, full insert sequence Length = 2558 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 614 gtgaaacaaataccccaagtgccataccaagaaccat 650 ||||||||||| ||||||| |||||||| ||||||| Sbjct: 1891 gtgaaacaaatcccccaagaaccataccatgaaccat 1855
>dbj|AK066327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062J12, full insert sequence Length = 2578 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 614 gtgaaacaaataccccaagtgccataccaagaaccat 650 ||||||||||| ||||||| |||||||| ||||||| Sbjct: 1946 gtgaaacaaatcccccaagaaccataccatgaaccat 1910
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 atattcacgaacaatcaatgt 79 ||||||||||||||||||||| Sbjct: 1912375 atattcacgaacaatcaatgt 1912395
>ref|NM_105367.2| Arabidopsis thaliana lupeol synthase AT1G66960 mRNA, complete cds Length = 2639 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 taagtgaaacaaatacccca 630 |||||||||||||||||||| Sbjct: 1989 taagtgaaacaaatacccca 1970
>gb|AC134662.11| Mus musculus chromosome 15, clone RP24-445D14, complete sequence Length = 177038 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 acaattgatttattggacacaataatat 125 |||||||||||| ||||| ||||||||| Sbjct: 112636 acaattgatttactggactcaataatat 112663
>gb|AC169038.4| Mus musculus BAC clone RP23-31H24 from chromosome 14, complete sequence Length = 214689 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 atatagtggcactggatata 380 |||||||||||||||||||| Sbjct: 146432 atatagtggcactggatata 146451
>gb|AC168116.3| Mus musculus BAC clone RP24-108N24 from chromosome 1, complete sequence Length = 158847 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 ccattctttctttgtttgtt 666 |||||||||||||||||||| Sbjct: 7392 ccattctttctttgtttgtt 7411
>gb|AC166095.3| Mus musculus BAC clone RP24-494O2 from chromosome 14, complete sequence Length = 155918 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 tctagctgcatattcatcaa 345 |||||||||||||||||||| Sbjct: 23020 tctagctgcatattcatcaa 23039
>gb|AC146316.3| Microcebus murinus clone CH257-437M14, complete sequence Length = 274705 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gatagctatgtttatcttca 186 |||||||||||||||||||| Sbjct: 86974 gatagctatgtttatcttca 86955
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcaatggaaagatagctttc 489 |||||||||||||||||||| Sbjct: 1713247 tcaatggaaagatagctttc 1713266
>gb|AY724269.1| Allophylus sp. KE273 maturase K (matK) gene, complete cds; chloroplast Length = 1562 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 atttattggacacaataata 124 |||||||||||||||||||| Sbjct: 246 atttattggacacaataata 265
>gb|AY724268.1| Allophylus natalensis maturase K (matK) gene, complete cds; chloroplast Length = 1562 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 atttattggacacaataata 124 |||||||||||||||||||| Sbjct: 246 atttattggacacaataata 265
>gb|AC145967.3| Pan troglodytes BAC clone RP43-17M21 from 7, complete sequence Length = 179148 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 672 tgtatgtagcagcatttttt 691 |||||||||||||||||||| Sbjct: 19398 tgtatgtagcagcatttttt 19379
>gb|AY814613.1| Schistosoma japonicum SJCHGC01823 protein mRNA, complete cds Length = 1453 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 539 ttcctcatacaatcactattatca 562 ||||||||| |||||||||||||| Sbjct: 103 ttcctcatataatcactattatca 80
>gb|AC120153.11| Mus musculus chromosome 14, clone RP24-251C20, complete sequence Length = 182524 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 atatagtggcactggatata 380 |||||||||||||||||||| Sbjct: 111533 atatagtggcactggatata 111514
>gb|AC132429.2| Mus musculus BAC clone RP23-203O20 from chromosome 1, complete sequence Length = 199083 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 ccattctttctttgtttgtt 666 |||||||||||||||||||| Sbjct: 120696 ccattctttctttgtttgtt 120715
>emb|CR956399.4| M.truncatula DNA sequence from clone MTH2-7L7 on chromosome 3, complete sequence Length = 142604 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 682 agcattttttatacattttt 701 |||||||||||||||||||| Sbjct: 37689 agcattttttatacattttt 37670
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 taagtgaaacaaatacccca 630 |||||||||||||||||||| Sbjct: 15680 taagtgaaacaaatacccca 15699
>emb|X67810.1|SCSLU7A S.cerevisiae SLU7 gene Length = 1826 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 685 attttttatacatttttcta 704 |||||||||||||||||||| Sbjct: 38 attttttatacatttttcta 57
>gb|AC122533.4| Mus musculus BAC clone RP24-538L1 from chromosome 13, complete sequence Length = 159734 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 676 tgtagcagcattttttatac 695 |||||||||||||||||||| Sbjct: 137114 tgtagcagcattttttatac 137133
>gb|AE014308.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 5 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 637 ataccaagaaccattctttc 656 |||||||||||||||||||| Sbjct: 126925 ataccaagaaccattctttc 126906
>gb|AC117189.3| Mus musculus BAC clone RP23-44D2 from 8, complete sequence Length = 165254 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 688 ttttatacatttttctatct 707 |||||||||||||||||||| Sbjct: 69865 ttttatacatttttctatct 69884
>gb|AY223221.1| Schistosoma japonicum clone ZZD289 mRNA sequence Length = 1406 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 539 ttcctcatacaatcactattatca 562 ||||||||| |||||||||||||| Sbjct: 88 ttcctcatataatcactattatca 65
>gb|AC117581.8| Mus musculus chromosome 3, clone RP23-105M18, complete sequence Length = 215747 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 ataaaaattcacatgatttc 541 |||||||||||||||||||| Sbjct: 201787 ataaaaattcacatgatttc 201806
>gb|AC002385.1| Homo sapiens BAC clone CTA-222A16 from 7, complete sequence Length = 201990 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 672 tgtatgtagcagcatttttt 691 |||||||||||||||||||| Sbjct: 152420 tgtatgtagcagcatttttt 152439
>gb|AC100092.9| Mus musculus chromosome 3, clone RP23-37H10, complete sequence Length = 186799 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tctagctgcatattcatcaa 345 |||||||||||||||||||| Sbjct: 149369 tctagctgcatattcatcaa 149350
>emb|CR933817.15| Mouse DNA sequence from clone DN-246G6 on chromosome 11, complete sequence Length = 218726 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 tctagctgcatattcatcaa 345 |||||||||||||||||||| Sbjct: 162897 tctagctgcatattcatcaa 162916
>emb|AL442645.8| Human DNA sequence from clone RP11-348N20 on chromosome 9 Contains the 3' end of a novel gene (KIAA1616) and a CpG island, complete sequence Length = 150684 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 agagccattatagggaaaat 246 |||||||||||||||||||| Sbjct: 33557 agagccattatagggaaaat 33576
>emb|AL161897.6| Human DNA sequence from clone RP11-262G14 on chromosome 13, complete sequence Length = 160455 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 637 ataccaagaaccattctttc 656 |||||||||||||||||||| Sbjct: 14220 ataccaagaaccattctttc 14201
>emb|AL138930.15| Human DNA sequence from clone RP11-528G1 on chromosome 1 Contains the SLAMF6 gene for SLAM family member 6, the CD84 gene for CD84 antigen (leukocyte antigen), a novel gene and the 3' end of the SLAMF1 gene for signaling lymphocytic activation molecule family member 1, complete sequence Length = 175386 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 atcaacaaaatagatagcta 174 |||||||||||||||||||| Sbjct: 87551 atcaacaaaatagatagcta 87532
>emb|AL135922.4| Human DNA sequence from clone RP5-875J13 on chromosome Xq22.1-22.3 Contains the 5' end of the gene for a novel protein, complete sequence Length = 61957 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 674 tatgtagcagcattttttat 693 |||||||||||||||||||| Sbjct: 48474 tatgtagcagcattttttat 48455
>emb|AL117336.22|HSA324I22 Human DNA sequence from clone RP11-324I22 on chromosome 10 Contains the 3' end of the CREM gene for cAMP responsive element modulator, the 5' end of the gene for cyclin fold protein 1 (CFP1) (CBCP1), two novel genes, a novel gene containing part of FLJ32718 and two CpG islands, complete sequence Length = 190690 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 664 gttctcaatgtatgtagcagcatt 687 |||||||||||| ||||||||||| Sbjct: 149828 gttctcaatgtaagtagcagcatt 149805
>emb|Z46796.1|SC8554 S.cerevisiae chromosome IV cosmid 8554 Length = 38760 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 685 attttttatacatttttcta 704 |||||||||||||||||||| Sbjct: 35837 attttttatacatttttcta 35818
>gb|BT000138.1| Arabidopsis thaliana Putative terpene synthase (At1g66960) mRNA, complete cds Length = 2348 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 taagtgaaacaaatacccca 630 |||||||||||||||||||| Sbjct: 1856 taagtgaaacaaatacccca 1837
>emb|X82086.1|SCCHROIV S.cerevisiae DNA for right arm of chromosome IV Length = 32821 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 685 attttttatacatttttcta 704 |||||||||||||||||||| Sbjct: 30195 attttttatacatttttcta 30176
>emb|BX890572.9| Zebrafish DNA sequence from clone CH211-234F20 in linkage group 4 Contains the gene for a novel protein containing two notch (DSL) domains and an EF hand domain, the gene for a novel protein similar to vertebrate myosin binding protein H (MYBPH), the gene for a novel protein sinilar to human and mouse CWF19-like 1, cell cycle control (S. pombe) (CWF19L1), the gene for a novel protein (zgc:55718), the gene for a novel protein containing Kelch motifs and a BTB/POZ domain, the sycp3 gene for synaptonemal complex protein 3, a novel gene and a CpG island, complete sequence Length = 166208 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aataatatactttgaaacat 137 |||||||||||||||||||| Sbjct: 139673 aataatatactttgaaacat 139654
>emb|CR378679.1| Photobacterium profundum SS9 chromosome 2; segment 5/7 Length = 349464 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 695 catttttctatctctttgca 714 |||||||||||||||||||| Sbjct: 328648 catttttctatctctttgca 328667
>emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87 Length = 196339 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tggacacaataatatacttt 130 |||||||||||||||||||| Sbjct: 69657 tggacacaataatatacttt 69638
>emb|AL035601.1|ATF6G17 Arabidopsis thaliana DNA chromosome 4, BAC clone F6G17 (ESSA project) Length = 101009 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tggacacaataatatacttt 130 |||||||||||||||||||| Sbjct: 27048 tggacacaataatatacttt 27029
>gb|AC154776.2| Mus musculus BAC clone RP23-101N7 from chromosome 14, complete sequence Length = 215871 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 acatgatttcctcatacaat 551 |||||||||||||||||||| Sbjct: 9289 acatgatttcctcatacaat 9270
>gb|AC022395.4| Homo sapiens chromosome 10 clone RP11-354M20, complete sequence Length = 193669 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 684 cattttttatacatttttct 703 |||||||||||||||||||| Sbjct: 103274 cattttttatacatttttct 103255
>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete sequence Length = 121160 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 650 ttctttctttgtttgttctc 669 |||||||||||||||||||| Sbjct: 48282 ttctttctttgtttgttctc 48263
>gb|AC093887.3| Homo sapiens BAC clone RP11-667D12 from 4, complete sequence Length = 192886 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 ctctgttgtttggacaataaaaat 529 ||||||||||||||| |||||||| Sbjct: 78043 ctctgttgtttggaccataaaaat 78066
>gb|AY062741.1| Arabidopsis thaliana Putative terpene synthase (At1g66960; F1O19.4) mRNA, complete cds Length = 2639 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 taagtgaaacaaatacccca 630 |||||||||||||||||||| Sbjct: 1989 taagtgaaacaaatacccca 1970
>gb|AC182392.2| Pan troglodytes BAC clone CH251-499D13 from chromosome 2, complete sequence Length = 159910 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 694 acatttttctatctctttgc 713 |||||||||||||||||||| Sbjct: 34469 acatttttctatctctttgc 34488
>gb|AC153139.5| Mus musculus BAC clone RP23-411M4 from chromosome 13, complete sequence Length = 192541 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 676 tgtagcagcattttttatac 695 |||||||||||||||||||| Sbjct: 17777 tgtagcagcattttttatac 17796
>gb|AC145069.9| Mus musculus chromosome 3, clone RP23-82B2, complete sequence Length = 134162 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 ataaaaattcacatgatttc 541 |||||||||||||||||||| Sbjct: 64338 ataaaaattcacatgatttc 64357
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 647 ccattctttctttgtttgttctca 670 ||||||||||||| |||||||||| Sbjct: 3016928 ccattctttctttctttgttctca 3016951
>gb|AC137524.4| Mus musculus BAC clone RP23-55M20 from chromosome 7, complete sequence Length = 253824 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tctagctgcatattcatcaa 345 |||||||||||||||||||| Sbjct: 170512 tctagctgcatattcatcaa 170493
>gb|AF338821.1|AF338821 Amazona farinosa cytochrome b gene, partial cds; tRNA-Thr gene, complete sequence; NADH6 pseudogene, complete sequence; tRNA-Glu pseudogene, complete sequence; tRNA-Pro gene, complete sequence; NADH dehydrogenase subunit 6 (NADH6) gene, complete cds; tRNA-Glu and tRNA-Phe genes, complete sequence; and 12S ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products Length = 4709 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 ccattctttctttgtttgtt 666 |||||||||||||||||||| Sbjct: 3963 ccattctttctttgtttgtt 3982 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 ccattctttctttgtttgtt 666 |||||||||||||||||||| Sbjct: 1752 ccattctttctttgtttgtt 1771
>gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exon 5 and partial cds Length = 270491 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 acatgatttcctcatacaat 551 |||||||||||||||||||| Sbjct: 207843 acatgatttcctcatacaat 207862
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 698 ttttctatctctttgcatcg 717 |||||||||||||||||||| Sbjct: 24280355 ttttctatctctttgcatcg 24280374
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.8 Identities = 68/84 (80%) Strand = Plus / Plus Query: 553 actattatcataagtccttcccgaagcagctaaacctttcaccgcaaagaaggccccgta 612 |||||| ||||| || ||||| | |||| ||| ||||| || | |||||||||||| || Sbjct: 2163780 actattctcatatgttcttccagcagcaattaacccttttactgaaaagaaggccccata 2163839 Query: 613 agtgaaacaaataccccaagtgcc 636 ||||| || | |||||||||||| Sbjct: 2163840 ggtgaagcatacaccccaagtgcc 2163863
>gb|AE009469.1| Brucella melitensis 16M chromosome I, section 26 of 195 of the complete sequence Length = 11295 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcaatggaaagatagctttc 489 |||||||||||||||||||| Sbjct: 3460 tcaatggaaagatagctttc 3441
>gb|AC083891.4|AC083891 Arabidopsis thaliana chromosome 1 BAC T4O24 genomic sequence, complete sequence Length = 35116 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 taagtgaaacaaatacccca 630 |||||||||||||||||||| Sbjct: 241 taagtgaaacaaatacccca 222
>gb|AC010890.9| Homo sapiens BAC clone RP11-449L24 from 2, complete sequence Length = 62764 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 caataatatactttgaaacattccaaaa 144 ||||||||||||||||| ||||||||| Sbjct: 12817 caataatatactttgaactattccaaaa 12844
>gb|AC023672.9| Homo sapiens BAC clone RP11-499I20 from 2, complete sequence Length = 127266 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 694 acatttttctatctctttgc 713 |||||||||||||||||||| Sbjct: 7780 acatttttctatctctttgc 7761
>gb|AC006369.3| Homo sapiens BAC clone RP11-278G12 from 2, complete sequence Length = 188359 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 gtgttcctgttggggaaactctcc 321 |||||||||||||| ||||||||| Sbjct: 100408 gtgttcctgttgggaaaactctcc 100385
>gb|AF489920.1| Arabidopsis thaliana 2,3-oxidosqualene-triterpene cyclase (At1g66960) mRNA, complete cds Length = 2292 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 taagtgaaacaaatacccca 630 |||||||||||||||||||| Sbjct: 1856 taagtgaaacaaatacccca 1837
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcaatggaaagatagctttc 489 |||||||||||||||||||| Sbjct: 1730161 tcaatggaaagatagctttc 1730180
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08 Length = 142529 Score = 40.1 bits (20), Expect = 9.8 Identities = 68/84 (80%) Strand = Plus / Plus Query: 553 actattatcataagtccttcccgaagcagctaaacctttcaccgcaaagaaggccccgta 612 |||||| ||||| || ||||| | |||| ||| ||||| || | |||||||||||| || Sbjct: 78473 actattctcatatgttcttccagcagcaattaacccttttactgaaaagaaggccccata 78532 Query: 613 agtgaaacaaataccccaagtgcc 636 ||||| || | |||||||||||| Sbjct: 78533 ggtgaagcatacaccccaagtgcc 78556
>gb|AC005879.3|AC005879 citb_287_c_20, complete sequence Length = 190982 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 684 cattttttatacatttttct 703 |||||||||||||||||||| Sbjct: 25617 cattttttatacatttttct 25636
>gb|AC155274.2| Mus musculus BAC clone RP23-55F17 from 12, complete sequence Length = 127447 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gaaactctcctagagccatt 235 |||||||||||||||||||| Sbjct: 35775 gaaactctcctagagccatt 35794
>emb|Z74385.1|SCYDR089W S.cerevisiae chromosome IV reading frame ORF YDR089w Length = 5934 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 685 attttttatacatttttcta 704 |||||||||||||||||||| Sbjct: 837 attttttatacatttttcta 818
>emb|Z74384.1|SCYDR088C S.cerevisiae chromosome IV reading frame ORF YDR088c Length = 3805 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 685 attttttatacatttttcta 704 |||||||||||||||||||| Sbjct: 1662 attttttatacatttttcta 1643
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 698 ttttctatctctttgcatcg 717 |||||||||||||||||||| Sbjct: 24208561 ttttctatctctttgcatcg 24208580
>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135793 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 698 ttttctatctctttgcatcg 717 |||||||||||||||||||| Sbjct: 57129 ttttctatctctttgcatcg 57148
>gb|AC141428.4| Mus musculus BAC clone RP23-127I7 from 10, complete sequence Length = 164381 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tctagctgcatattcatcaa 345 |||||||||||||||||||| Sbjct: 36553 tctagctgcatattcatcaa 36534
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcaatggaaagatagctttc 489 |||||||||||||||||||| Sbjct: 1727318 tcaatggaaagatagctttc 1727337
>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold Length = 1595145 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gatagctatgtttatcttca 186 |||||||||||||||||||| Sbjct: 658465 gatagctatgtttatcttca 658446
>gb|AC156790.2| Mus musculus BAC clone RP24-359N3 from chromosome 14, complete sequence Length = 233946 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tctagctgcatattcatcaa 345 |||||||||||||||||||| Sbjct: 141689 tctagctgcatattcatcaa 141670
>emb|AL672285.8| Mouse DNA sequence from clone RP23-45G5 on chromosome X, complete sequence Length = 164443 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 tctagctgcatattcatcaa 345 |||||||||||||||||||| Sbjct: 115585 tctagctgcatattcatcaa 115604
>emb|AL670256.6| Mouse DNA sequence from clone RP23-300H22 on chromosome 4, complete sequence Length = 237318 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acaaaatagatagctatgtt 178 |||||||||||||||||||| Sbjct: 175287 acaaaatagatagctatgtt 175268
>emb|AL731713.8| Mouse DNA sequence from clone RP23-32L9 on chromosome 2, complete sequence Length = 219076 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 aagtgaaacaaataccccaa 631 |||||||||||||||||||| Sbjct: 172839 aagtgaaacaaataccccaa 172858
>gb|AC166344.4| Mus musculus BAC clone RP24-63B17 from chromosome 14, complete sequence Length = 224882 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tctagctgcatattcatcaa 345 |||||||||||||||||||| Sbjct: 3914 tctagctgcatattcatcaa 3895 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,140,602 Number of Sequences: 3902068 Number of extensions: 8140602 Number of successful extensions: 185192 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 117 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 184298 Number of HSP's gapped (non-prelim): 887 length of query: 719 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 696 effective length of database: 17,143,297,704 effective search space: 11931735201984 effective search space used: 11931735201984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)