| Clone Name | rbags1e08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 272 bits (137), Expect = 1e-69 Identities = 182/197 (92%) Strand = Plus / Plus Query: 306 gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 365 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 32453 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 32512 Query: 366 tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacatt 425 |||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||| Sbjct: 32513 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 32572 Query: 426 aggtgagcagctgtggttcatgaagcgagctatgttaccagtatattttgcactaataat 485 |||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||| Sbjct: 32573 tggtgagcagctgtggttcataaagcgagctatgtttccagttcgttttgcactgataat 32632 Query: 486 tattggcaactgcttag 502 |||||||| ||||||| Sbjct: 32633 tattggcagttgcttag 32649 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 233 tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 292 |||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 32359 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 32418 Query: 293 accctgaatt 302 | || ||||| Sbjct: 32419 atccagaatt 32428
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 272 bits (137), Expect = 1e-69 Identities = 182/197 (92%) Strand = Plus / Plus Query: 306 gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 365 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 143971 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 144030 Query: 366 tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacatt 425 |||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||| Sbjct: 144031 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 144090 Query: 426 aggtgagcagctgtggttcatgaagcgagctatgttaccagtatattttgcactaataat 485 |||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||| Sbjct: 144091 tggtgagcagctgtggttcataaagcgagctatgtttccagttcgttttgcactgataat 144150 Query: 486 tattggcaactgcttag 502 |||||||| ||||||| Sbjct: 144151 tattggcagttgcttag 144167 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 233 tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 292 |||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 143877 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 143936 Query: 293 accctgaatt 302 | || ||||| Sbjct: 143937 atccagaatt 143946
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 272 bits (137), Expect = 1e-69 Identities = 182/197 (92%) Strand = Plus / Minus Query: 306 gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 365 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 22308845 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 22308786 Query: 366 tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacatt 425 |||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||| Sbjct: 22308785 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 22308726 Query: 426 aggtgagcagctgtggttcatgaagcgagctatgttaccagtatattttgcactaataat 485 |||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||| Sbjct: 22308725 tggtgagcagctgtggttcataaagcgagctatgtttccagttcgttttgcactgataat 22308666 Query: 486 tattggcaactgcttag 502 |||||||| ||||||| Sbjct: 22308665 tattggcagttgcttag 22308649 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 233 tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 292 |||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 22308939 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 22308880 Query: 293 accctgaatt 302 | || ||||| Sbjct: 22308879 atccagaatt 22308870
>gb|AF344453.1|AF344453 Oryza sativa SET1 (SET1) mRNA, complete cds Length = 2982 Score = 272 bits (137), Expect = 1e-69 Identities = 182/197 (92%) Strand = Plus / Minus Query: 306 gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 365 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 2421 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 2362 Query: 366 tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacatt 425 |||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||| Sbjct: 2361 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 2302 Query: 426 aggtgagcagctgtggttcatgaagcgagctatgttaccagtatattttgcactaataat 485 |||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||| Sbjct: 2301 tggtgagcagctgtggttcataaagcgagctatgtttccagttcgttttgcactgataat 2242 Query: 486 tattggcaactgcttag 502 |||||||| ||||||| Sbjct: 2241 tattggcagttgcttag 2225 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 233 tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 292 |||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 2515 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 2456 Query: 293 accctgaatt 302 | || ||||| Sbjct: 2455 atccagaatt 2446
>dbj|AK102379.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092A08, full insert sequence Length = 3270 Score = 272 bits (137), Expect = 1e-69 Identities = 182/197 (92%) Strand = Plus / Minus Query: 306 gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 365 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 2741 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 2682 Query: 366 tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacatt 425 |||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||| Sbjct: 2681 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 2622 Query: 426 aggtgagcagctgtggttcatgaagcgagctatgttaccagtatattttgcactaataat 485 |||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||| Sbjct: 2621 tggtgagcagctgtggttcataaagcgagctatgtttccagttcgttttgcactgataat 2562 Query: 486 tattggcaactgcttag 502 |||||||| ||||||| Sbjct: 2561 tattggcagttgcttag 2545 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 233 tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 292 |||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 2835 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 2776 Query: 293 accctgaatt 302 | || ||||| Sbjct: 2775 atccagaatt 2766
>dbj|AK059336.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A12, full insert sequence Length = 1858 Score = 272 bits (137), Expect = 1e-69 Identities = 182/197 (92%) Strand = Plus / Minus Query: 306 gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 365 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 1449 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 1390 Query: 366 tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacatt 425 |||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||| Sbjct: 1389 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 1330 Query: 426 aggtgagcagctgtggttcatgaagcgagctatgttaccagtatattttgcactaataat 485 |||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||| Sbjct: 1329 tggtgagcagctgtggttcataaagcgagctatgtttccagttcgttttgcactgataat 1270 Query: 486 tattggcaactgcttag 502 |||||||| ||||||| Sbjct: 1269 tattggcagttgcttag 1253
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 272 bits (137), Expect = 1e-69 Identities = 182/197 (92%) Strand = Plus / Minus Query: 306 gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 365 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 22618756 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 22618697 Query: 366 tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacatt 425 |||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||| Sbjct: 22618696 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 22618637 Query: 426 aggtgagcagctgtggttcatgaagcgagctatgttaccagtatattttgcactaataat 485 |||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||| Sbjct: 22618636 tggtgagcagctgtggttcataaagcgagctatgtttccagttcgttttgcactgataat 22618577 Query: 486 tattggcaactgcttag 502 |||||||| ||||||| Sbjct: 22618576 tattggcagttgcttag 22618560 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 233 tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 292 |||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 22618850 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 22618791 Query: 293 accctgaatt 302 | || ||||| Sbjct: 22618790 atccagaatt 22618781
>gb|AY104411.1| Zea mays PCO124128 mRNA sequence Length = 1300 Score = 262 bits (132), Expect = 1e-66 Identities = 192/212 (90%) Strand = Plus / Minus Query: 308 tctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatg 367 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 tctgaccataatcataggtaagctctgtcattggaggaatatgcttaattgcaaagaatg 713 Query: 368 cgatgtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacattag 427 | || ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 712 caatatgtggatatccctcatcaccatgatcatacagaactggttgccaaaacacattag 653 Query: 428 gtgagcagctgtggttcatgaagcgagctatgttaccagtatattttgcactaataatta 487 ||||||||||||||||||| |||||||||||||| || || ||||||||| || | || Sbjct: 652 gtgagcagctgtggttcataaagcgagctatgttgccggttcgttttgcactgatgacta 593 Query: 488 ttggcaactgcttagatgattcatttaagtca 519 | |||| |||||| | || ||||||| ||||| Sbjct: 592 taggcagctgctttggtgtttcatttgagtca 561 Score = 69.9 bits (35), Expect = 8e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 233 tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccga 291 |||||||||||||||| || ||||| | |||||||||||||||||||||||| ||||| Sbjct: 871 tttagccaaaggaacctctacacttcggggaccaacataagcaacttttagacttccga 813
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 149 bits (75), Expect = 1e-32 Identities = 159/187 (85%) Strand = Plus / Minus Query: 310 tgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcg 369 |||||||||||||| |||||||||||||| |||||||| | ||| |||||||||||||| Sbjct: 11536905 tgaccataatcataagtaagctctgtcatgggaggaatgttcttgattgcaaagaatgca 11536846 Query: 370 atgtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacattaggt 429 || ||||| || |||||||||||||| ||||||| ||||| || | ||||||||||| Sbjct: 11536845 atatgtgggtagccctcatcaccatgatcatacatcactggctggtagaaaacattagga 11536786 Query: 430 gagcagctgtggttcatgaagcgagctatgttaccagtatattttgcactaataattatt 489 ||||| || || |||||||| ||||||| ||| ||||| | ||||||||||| ||| || Sbjct: 11536785 gagcaactatgattcatgaaacgagctacgttgccagtttgctttgcactaatgattgtt 11536726 Query: 490 ggcaact 496 ||||||| Sbjct: 11536725 ggcaact 11536719
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 149 bits (75), Expect = 1e-32 Identities = 159/187 (85%) Strand = Plus / Minus Query: 310 tgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcg 369 |||||||||||||| |||||||||||||| |||||||| | ||| |||||||||||||| Sbjct: 87477 tgaccataatcataagtaagctctgtcatgggaggaatgttcttgattgcaaagaatgca 87418 Query: 370 atgtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacattaggt 429 || ||||| || |||||||||||||| ||||||| ||||| || | ||||||||||| Sbjct: 87417 atatgtgggtagccctcatcaccatgatcatacatcactggctggtagaaaacattagga 87358 Query: 430 gagcagctgtggttcatgaagcgagctatgttaccagtatattttgcactaataattatt 489 ||||| || || |||||||| ||||||| ||| ||||| | ||||||||||| ||| || Sbjct: 87357 gagcaactatgattcatgaaacgagctacgttgccagtttgctttgcactaatgattgtt 87298 Query: 490 ggcaact 496 ||||||| Sbjct: 87297 ggcaact 87291
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 149 bits (75), Expect = 1e-32 Identities = 159/187 (85%) Strand = Plus / Minus Query: 310 tgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcg 369 |||||||||||||| |||||||||||||| |||||||| | ||| |||||||||||||| Sbjct: 11533668 tgaccataatcataagtaagctctgtcatgggaggaatgttcttgattgcaaagaatgca 11533609 Query: 370 atgtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacattaggt 429 || ||||| || |||||||||||||| ||||||| ||||| || | ||||||||||| Sbjct: 11533608 atatgtgggtagccctcatcaccatgatcatacatcactggctggtagaaaacattagga 11533549 Query: 430 gagcagctgtggttcatgaagcgagctatgttaccagtatattttgcactaataattatt 489 ||||| || || |||||||| ||||||| ||| ||||| | ||||||||||| ||| || Sbjct: 11533548 gagcaactatgattcatgaaacgagctacgttgccagtttgctttgcactaatgattgtt 11533489 Query: 490 ggcaact 496 ||||||| Sbjct: 11533488 ggcaact 11533482
>gb|AY596552.1| Saccharum officinarum clone SCCCRZ2001G10, complete sequence Length = 2562 Score = 83.8 bits (42), Expect = 5e-13 Identities = 114/138 (82%) Strand = Plus / Plus Query: 312 accataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcgat 371 |||||| ||||| || || |||||||| || ||||||||||| | ||||||||| || Sbjct: 533 accatagtcataagtcagttctgtcatgggtggaatatgcttcagtgcaaagaacattat 592 Query: 372 gtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacattaggtga 431 ||||| | ||| ||||| ||||| ||||| ||||||||||||| || ||||| ||||| Sbjct: 593 atgtgggtgtccatcatctccatgatcatattgaactggttgccagaagacattgggtga 652 Query: 432 gcagctgtggttcatgaa 449 ||| |||||||||||||| Sbjct: 653 gcaactgtggttcatgaa 670
>gb|AY093419.1| Zea mays SET domain protein 105 (set105) mRNA, complete cds Length = 2487 Score = 75.8 bits (38), Expect = 1e-10 Identities = 113/138 (81%) Strand = Plus / Minus Query: 312 accataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcgat 371 |||||| ||||| || || |||||||| || ||||||||||| | ||||||||| || Sbjct: 2070 accatagtcataagtcagttctgtcatgggtggaatatgcttcagtgcaaagaacattat 2011 Query: 372 gtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacattaggtga 431 || || | ||| ||||| || || ||||| |||||||||||||||| ||||| ||||| Sbjct: 2010 atgcgggtgtccatcatctccgtgatcatattgaactggttgccaaaagacattgggtga 1951 Query: 432 gcagctgtggttcatgaa 449 ||| |||||||||||||| Sbjct: 1950 gcaactgtggttcatgaa 1933
>gb|AY112212.1| Zea mays CL3507_2 mRNA sequence Length = 824 Score = 75.8 bits (38), Expect = 1e-10 Identities = 113/138 (81%) Strand = Plus / Plus Query: 312 accataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcgat 371 |||||| ||||| || || |||||||| || ||||||||||| | ||||||||| || Sbjct: 479 accatagtcataagtcagttctgtcatgggtggaatatgcttcagtgcaaagaacattat 538 Query: 372 gtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacattaggtga 431 || || | ||| ||||| || || ||||| |||||||||||||||| ||||| ||||| Sbjct: 539 atgcgggtgtccatcatctccgtgatcatattgaactggttgccaaaagacattgggtga 598 Query: 432 gcagctgtggttcatgaa 449 ||| |||||||||||||| Sbjct: 599 gcaactgtggttcatgaa 616
>gb|AY187718.2| Zea mays SET domain protein SDG111 mRNA, complete cds Length = 2413 Score = 67.9 bits (34), Expect = 3e-08 Identities = 112/138 (81%) Strand = Plus / Minus Query: 312 accataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcgat 371 |||||| ||||| || || |||||||| || |||||||| || | ||||||||| || Sbjct: 1948 accatagtcataagtcagttctgtcatgggtggaatatgtttcagtgcaaagaacattat 1889 Query: 372 gtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacattaggtga 431 ||||| | ||| ||||| ||||| ||||| |||| |||||||| || ||||| ||||| Sbjct: 1888 atgtgggtgtccatcatctccatgatcatattgaacaggttgccagaagacattgggtga 1829 Query: 432 gcagctgtggttcatgaa 449 ||| |||||||||||||| Sbjct: 1828 gcaactgtggttcatgaa 1811
>gb|BT024023.1| Zea mays clone EL01N0414B01 mRNA sequence Length = 1607 Score = 67.9 bits (34), Expect = 3e-08 Identities = 112/138 (81%) Strand = Plus / Minus Query: 312 accataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcgat 371 |||||| ||||| || || |||||||| || |||||||| || | ||||||||| || Sbjct: 1159 accatagtcataagtcagttctgtcatgggtggaatatgtttcagtgcaaagaacattat 1100 Query: 372 gtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacattaggtga 431 ||||| | ||| ||||| ||||| ||||| |||| |||||||| || ||||| ||||| Sbjct: 1099 atgtgggtgtccatcatctccatgatcatattgaaccggttgccagaagacattgggtga 1040 Query: 432 gcagctgtggttcatgaa 449 ||| |||||||||||||| Sbjct: 1039 gcaactgtggttcatgaa 1022
>gb|AY109913.1| Zea mays CL3507_1 mRNA sequence Length = 1269 Score = 67.9 bits (34), Expect = 3e-08 Identities = 112/138 (81%) Strand = Plus / Plus Query: 312 accataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcgat 371 |||||| ||||| || || |||||||| || |||||||| || | ||||||||| || Sbjct: 462 accatagtcataagtcagttctgtcatgggtggaatatgtttcagtgcaaagaacattat 521 Query: 372 gtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacattaggtga 431 ||||| | ||| ||||| ||||| ||||| |||| |||||||| || ||||| ||||| Sbjct: 522 atgtgggtgtccatcatctccatgatcatattgaacaggttgccagaagacattgggtga 581 Query: 432 gcagctgtggttcatgaa 449 ||| |||||||||||||| Sbjct: 582 gcaactgtggttcatgaa 599
>ref|NM_191045.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2211 Score = 63.9 bits (32), Expect = 5e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 313 ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcgatg 372 ||||| ||||| || || |||||||| |||||||||||||| | ||| ||||| |||| Sbjct: 2123 ccatagtcataagtcagttctgtcatgggaggaatatgcttcagtgcgaagaacatgatg 2064 Query: 373 tgtggatatccctcatcaccatggtcatacagaactggttgcca 416 |||||||| || || || ||||||||| | ||||||||||||| Sbjct: 2063 tgtggataaccatcctctccatggtcaaattgaactggttgcca 2020
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 5e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 313 ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcgatg 372 ||||| ||||| || || |||||||| |||||||||||||| | ||| ||||| |||| Sbjct: 34476671 ccatagtcataagtcagttctgtcatgggaggaatatgcttcagtgcgaagaacatgatg 34476612 Query: 373 tgtggatatccctcatcaccatggtcatacagaactggttgcca 416 |||||||| || || || ||||||||| | ||||||||||||| Sbjct: 34476611 tgtggataaccatcctctccatggtcaaattgaactggttgcca 34476568
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 63.9 bits (32), Expect = 5e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 313 ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcgatg 372 ||||| ||||| || || |||||||| |||||||||||||| | ||| ||||| |||| Sbjct: 159015 ccatagtcataagtcagttctgtcatgggaggaatatgcttcagtgcgaagaacatgatg 158956 Query: 373 tgtggatatccctcatcaccatggtcatacagaactggttgcca 416 |||||||| || || || ||||||||| | ||||||||||||| Sbjct: 158955 tgtggataaccatcctctccatggtcaaattgaactggttgcca 158912
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 63.9 bits (32), Expect = 5e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 313 ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcgatg 372 ||||| ||||| || || |||||||| |||||||||||||| | ||| ||||| |||| Sbjct: 52390 ccatagtcataagtcagttctgtcatgggaggaatatgcttcagtgcgaagaacatgatg 52331 Query: 373 tgtggatatccctcatcaccatggtcatacagaactggttgcca 416 |||||||| || || || ||||||||| | ||||||||||||| Sbjct: 52330 tgtggataaccatcctctccatggtcaaattgaactggttgcca 52287
>dbj|AK065227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H03, full insert sequence Length = 2926 Score = 63.9 bits (32), Expect = 5e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 313 ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcgatg 372 ||||| ||||| || || |||||||| |||||||||||||| | ||| ||||| |||| Sbjct: 2426 ccatagtcataagtcagttctgtcatgggaggaatatgcttcagtgcgaagaacatgatg 2367 Query: 373 tgtggatatccctcatcaccatggtcatacagaactggttgcca 416 |||||||| || || || ||||||||| | ||||||||||||| Sbjct: 2366 tgtggataaccatcctctccatggtcaaattgaactggttgcca 2323
>ref|NM_105968.2| Arabidopsis thaliana SUVH3 (SU(VAR)3-9 HOMOLOG 3) AT1G73100 (SUVH3) mRNA, complete cds Length = 2384 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 405 aactggttgccaaaaaacattaggtgagcagctgtggttcatgaagcgagcta 457 |||||| ||||||||||| ||||| ||||| || ||||||||||| ||||||| Sbjct: 1992 aactggctgccaaaaaacgttaggagagcaactatggttcatgaaccgagcta 1940
>gb|AY099620.1| Arabidopsis thaliana unknown protein (At1g73100) mRNA, complete cds Length = 2383 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 405 aactggttgccaaaaaacattaggtgagcagctgtggttcatgaagcgagcta 457 |||||| ||||||||||| ||||| ||||| || ||||||||||| ||||||| Sbjct: 1992 aactggctgccaaaaaacgttaggagagcaactatggttcatgaaccgagcta 1940
>gb|AF344446.2|AF344446 Arabidopsis thaliana SUVH3 (SUVH3) mRNA, complete cds Length = 2325 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 405 aactggttgccaaaaaacattaggtgagcagctgtggttcatgaagcgagcta 457 |||||| ||||||||||| ||||| ||||| || ||||||||||| ||||||| Sbjct: 1970 aactggctgccaaaaaacgttaggagagcaactatggttcatgaaccgagcta 1918
>gb|BT002137.1| Arabidopsis thaliana unknown protein (At1g73100) mRNA, complete cds Length = 2113 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 405 aactggttgccaaaaaacattaggtgagcagctgtggttcatgaagcgagcta 457 |||||| ||||||||||| ||||| ||||| || ||||||||||| ||||||| Sbjct: 1821 aactggctgccaaaaaacgttaggagagcaactatggttcatgaaccgagcta 1769
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 405 aactggttgccaaaaaacattaggtgagcagctgtggttcatgaagcgagcta 457 |||||| ||||||||||| ||||| ||||| || ||||||||||| ||||||| Sbjct: 96362 aactggctgccaaaaaacgttaggagagcaactatggttcatgaaccgagcta 96310
>ref|XM_475460.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2019 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 331 tctgtcattggaggaatatgcttaattgcaaagaatgcgatgtgtggatatccctcatca 390 |||||||| |||||||| ||||| | ||||||||| ||| ||||| | | ||||| Sbjct: 1919 tctgtcatgggaggaatgtgcttcagtgcaaagaacatgatatgtgggtggctgtcatct 1860 Query: 391 ccatggtcatacagaactggttgccaaaaaacattaggtgagcagctgtggttcatgaa 449 |||||||||| | ||||||| ||||| |||||||| || || || || ||||||||||| Sbjct: 1859 ccatggtcatgctgaactggctgccagaaaacattcggggaacaactatggttcatgaa 1801
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 331 tctgtcattggaggaatatgcttaattgcaaagaatgcgatgtgtggatatccctcatca 390 |||||||| |||||||| ||||| | ||||||||| ||| ||||| | | ||||| Sbjct: 40274 tctgtcatgggaggaatgtgcttcagtgcaaagaacatgatatgtgggtggctgtcatct 40333 Query: 391 ccatggtcatacagaactggttgccaaaaaacattaggtgagcagctgtggttcatgaa 449 |||||||||| | ||||||| ||||| |||||||| || || || || ||||||||||| Sbjct: 40334 ccatggtcatgctgaactggctgccagaaaacattcggggaacaactatggttcatgaa 40392
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 331 tctgtcattggaggaatatgcttaattgcaaagaatgcgatgtgtggatatccctcatca 390 |||||||| |||||||| ||||| | ||||||||| ||| ||||| | | ||||| Sbjct: 40624 tctgtcatgggaggaatgtgcttcagtgcaaagaacatgatatgtgggtggctgtcatct 40565 Query: 391 ccatggtcatacagaactggttgccaaaaaacattaggtgagcagctgtggttcatgaa 449 |||||||||| | ||||||| ||||| |||||||| || || || || ||||||||||| Sbjct: 40564 ccatggtcatgctgaactggctgccagaaaacattcggggaacaactatggttcatgaa 40506
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 331 tctgtcattggaggaatatgcttaattgcaaagaatgcgatgtgtggatatccctcatca 390 |||||||| |||||||| ||||| | ||||||||| ||| ||||| | | ||||| Sbjct: 23971785 tctgtcatgggaggaatgtgcttcagtgcaaagaacatgatatgtgggtggctgtcatct 23971844 Query: 391 ccatggtcatacagaactggttgccaaaaaacattaggtgagcagctgtggttcatgaa 449 |||||||||| | ||||||| ||||| |||||||| || || || || ||||||||||| Sbjct: 23971845 ccatggtcatgctgaactggctgccagaaaacattcggggaacaactatggttcatgaa 23971903
>dbj|AK069035.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004N15, full insert sequence Length = 2721 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 331 tctgtcattggaggaatatgcttaattgcaaagaatgcgatgtgtggatatccctcatca 390 |||||||| |||||||| ||||| | ||||||||| ||| ||||| | | ||||| Sbjct: 2198 tctgtcatgggaggaatgtgcttcagtgcaaagaacatgatatgtgggtggctgtcatct 2139 Query: 391 ccatggtcatacagaactggttgccaaaaaacattaggtgagcagctgtggttcatgaa 449 |||||||||| | ||||||| ||||| |||||||| || || || || ||||||||||| Sbjct: 2138 ccatggtcatgctgaactggctgccagaaaacattcggggaacaactatggttcatgaa 2080
>ref|NM_101640.1| Arabidopsis thaliana SUVH7 (SU(VAR)3-9 HOMOLOG 7); histone-lysine N-methyltransferase/ zinc ion binding AT1G17770 (SUVH7) mRNA, complete cds Length = 2082 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 313 ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaa 362 ||||| |||||||| | ||||||||| |||||||||||||| || ||||| Sbjct: 1979 ccatagtcatatgttaactctgtcatcggaggaatatgcttcatagcaaa 1930
>ref|NM_128034.2| Arabidopsis thaliana SDG21 (SET DOMAIN GROUP 21) AT2G24740 (SDG21) mRNA, complete cds Length = 2268 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 313 ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaa 362 ||||| |||||||| | |||||||||||||||||| ||||| || ||||| Sbjct: 2168 ccatagtcatatgttaactctgtcattggaggaatgtgcttcatcgcaaa 2119
>gb|AC007266.5| Arabidopsis thaliana chromosome 2 clone F27A10 map mi238, complete sequence Length = 66237 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 313 ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaa 362 ||||| |||||||| | |||||||||||||||||| ||||| || ||||| Sbjct: 26691 ccatagtcatatgttaactctgtcattggaggaatgtgcttcatcgcaaa 26740
>gb|AF344451.1|AF344451 Arabidopsis thaliana SUVH8 (SUVH8) gene, complete cds Length = 2268 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 313 ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaa 362 ||||| |||||||| | |||||||||||||||||| ||||| || ||||| Sbjct: 2168 ccatagtcatatgttaactctgtcattggaggaatgtgcttcatcgcaaa 2119
>gb|AF344450.1|AF344450 Arabidopsis thaliana SUVH7 (SUVH7) mRNA, complete cds Length = 2082 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 313 ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaa 362 ||||| |||||||| | ||||||||| |||||||||||||| || ||||| Sbjct: 1979 ccatagtcatatgttaactctgtcatcggaggaatatgcttcatagcaaa 1930
>gb|AC034106.4|F2H15 Sequence of BAC F2H15 from Arabidopsis thaliana chromosome 1, complete sequence Length = 75133 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 313 ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaa 362 ||||| |||||||| | ||||||||| |||||||||||||| || ||||| Sbjct: 3730 ccatagtcatatgttaactctgtcatcggaggaatatgcttcatagcaaa 3681
>emb|CR847981.15| Zebrafish DNA sequence from clone CH211-195H23 in linkage group 15, complete sequence Length = 197506 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 354 aattgcaaagaatgcgatgtgtg 376 ||||||||||||||||||||||| Sbjct: 174104 aattgcaaagaatgcgatgtgtg 174126
>gb|BC093421.1| Danio rerio similar to Wolf-Hirschhorn syndrome candidate 1 protein isoform 1, mRNA (cDNA clone IMAGE:7158283), partial cds Length = 1705 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 gcagctgtggttcatgaagcgag 454 ||||||||||||||||||||||| Sbjct: 284 gcagctgtggttcatgaagcgag 262
>ref|XM_694290.1| PREDICTED: Danio rerio similar to Wolf-Hirschhorn syndrome candidate 1 protein isoform 1 (LOC570773), mRNA Length = 2140 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 gcagctgtggttcatgaagcgag 454 ||||||||||||||||||||||| Sbjct: 758 gcagctgtggttcatgaagcgag 736
>ref|XM_680116.1| PREDICTED: Danio rerio similar to Wolf-Hirschhorn syndrome candidate 1 protein isoform 1 (LOC557114), mRNA Length = 5337 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 gcagctgtggttcatgaagcgag 454 ||||||||||||||||||||||| Sbjct: 3954 gcagctgtggttcatgaagcgag 3932
>emb|BX119973.7| Zebrafish DNA sequence from clone RP71-77D7 in linkage group 13, complete sequence Length = 182073 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 gcagctgtggttcatgaagcgag 454 ||||||||||||||||||||||| Sbjct: 143907 gcagctgtggttcatgaagcgag 143885
>emb|CT573111.9| Zebrafish DNA sequence from clone CH211-233A24 in linkage group 13, complete sequence Length = 77487 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 432 gcagctgtggttcatgaagcgag 454 ||||||||||||||||||||||| Sbjct: 60556 gcagctgtggttcatgaagcgag 60578
>ref|NM_180436.1| Arabidopsis thaliana SUVH1 (SU(VAR)3-9 HOMOLOG 1) AT5G04940 (SUVH1) transcript variant AT5G04940.2 mRNA, complete cds Length = 2740 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 412 tgccaaaaaacattaggtgagcagctgtggttcatgaa 449 ||||| ||||||||||||||||| || || |||||||| Sbjct: 2179 tgccagaaaacattaggtgagcaactatgattcatgaa 2142
>ref|NM_120576.1| Arabidopsis thaliana SUVH1 (SU(VAR)3-9 HOMOLOG 1) AT5G04940 (SUVH1) transcript variant AT5G04940.1 mRNA, complete cds Length = 2824 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 412 tgccaaaaaacattaggtgagcagctgtggttcatgaa 449 ||||| ||||||||||||||||| || || |||||||| Sbjct: 2179 tgccagaaaacattaggtgagcaactatgattcatgaa 2142
>gb|AF545813.1| Zea mays SET domain protein 113 (sdg113) mRNA, complete cds Length = 2428 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Minus Query: 312 accataatcatatgtaagctctgtcattggaggaatatgctt 353 |||||| ||||| || | ||||||||| |||||||||||||| Sbjct: 2254 accatagtcataagtcaactctgtcatgggaggaatatgctt 2213
>gb|AY634575.1| Triticum aestivum cultivar PI-94640 SET domain protein gene, complete cds Length = 2259 Score = 44.1 bits (22), Expect = 0.45 Identities = 109/138 (78%) Strand = Plus / Minus Query: 312 accataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgcgat 371 |||||| ||||| || ||||||||||| ||||| || ||||| | |||||||| ||| Sbjct: 2148 accatagtcataagtcagctctgtcatgggagggatgtgctttagcgcaaagaacatgat 2089 Query: 372 gtgtggatatccctcatcaccatggtcatacagaactggttgccaaaaaacattaggtga 431 ||||| | || ||||| ||||||||| || ||||||| ||||| || | ||||| || Sbjct: 2088 atgtgggtgaccgtcatctccatggtcaaactgaactggctgccagaaggcgttagggga 2029 Query: 432 gcagctgtggttcatgaa 449 ||| || || |||||||| Sbjct: 2028 gcaactatgattcatgaa 2011
>gb|AF344444.1|AF344444 Arabidopsis thaliana SUVH1 (SUVH1) mRNA, complete cds Length = 2824 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 412 tgccaaaaaacattaggtgagcagctgtggttcatgaa 449 ||||| ||||||||||||||||| || || |||||||| Sbjct: 2179 tgccagaaaacattaggtgagcaactatgattcatgaa 2142
>dbj|AB005245.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUG13 Length = 86630 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 412 tgccaaaaaacattaggtgagcagctgtggttcatgaa 449 ||||| ||||||||||||||||| || || |||||||| Sbjct: 22040 tgccagaaaacattaggtgagcaactatgattcatgaa 22077
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 tattggcaactgcttagatga 506 ||||||||||||||||||||| Sbjct: 972818 tattggcaactgcttagatga 972838
>gb|AC073618.48| Homo sapiens 12 BAC RP11-313E9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 92909 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 agaaagaggcagcaaagttat 142 ||||||||||||||||||||| Sbjct: 59901 agaaagaggcagcaaagttat 59881
>gb|AC170189.2| Mus musculus BAC clone RP23-103L12 from chromosome 3, complete sequence Length = 204731 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 gattatttagccaaaggaac 247 |||||||||||||||||||| Sbjct: 46135 gattatttagccaaaggaac 46154
>ref|NM_196119.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OJ1208D02.14), mRNA Length = 726 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 tccctcatcaccatggtcat 400 |||||||||||||||||||| Sbjct: 329 tccctcatcaccatggtcat 348
>gb|AY634576.1| Triticum aestivum SET domain protein mRNA, complete cds Length = 1440 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 406 actggttgccaaaaaacattaggtgagcagctgtggttcatgaa 449 ||||| ||||| || ||||| || ||||| |||||||||||||| Sbjct: 1160 actggctgccagaagacatttggggagcaactgtggttcatgaa 1117
>gb|BT012756.1| Lycopersicon esculentum clone 113700R, mRNA sequence Length = 1165 Score = 40.1 bits (20), Expect = 7.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 160 caccacacccataat-gccgccgccaccataa 190 ||||| ||||||||| |||||||||||||||| Sbjct: 529 caccagacccataattgccgccgccaccataa 498
>gb|AC123947.5| Mus musculus BAC clone RP23-103O6 from chromosome 8, complete sequence Length = 187773 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gatgtgtggatatccctcat 388 |||||||||||||||||||| Sbjct: 46446 gatgtgtggatatccctcat 46427 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gatgtgtggatatccctcat 388 |||||||||||||||||||| Sbjct: 46363 gatgtgtggatatccctcat 46344
>gb|AC161381.2| Mus musculus BAC clone RP23-166L22 from chromosome 8, complete sequence Length = 233354 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gatgtgtggatatccctcat 388 |||||||||||||||||||| Sbjct: 11264 gatgtgtggatatccctcat 11283 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gatgtgtggatatccctcat 388 |||||||||||||||||||| Sbjct: 11181 gatgtgtggatatccctcat 11200
>gb|AY369140.1| Shigella boydii type 13 O antigen gene cluster, partial sequence Length = 14504 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 attattggcaactgcttaga 503 |||||||||||||||||||| Sbjct: 6961 attattggcaactgcttaga 6942
>gb|AC122934.2| Mus musculus BAC clone RP23-19A13 from 3, complete sequence Length = 189627 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 gattatttagccaaaggaac 247 |||||||||||||||||||| Sbjct: 153607 gattatttagccaaaggaac 153626
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ggttgattatttagccaaag 243 |||||||||||||||||||| Sbjct: 1242833 ggttgattatttagccaaag 1242852
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 tccctcatcaccatggtcat 400 |||||||||||||||||||| Sbjct: 35512 tccctcatcaccatggtcat 35493
>emb|AJ294474.1|NTA294474 Nicotiana tabacum mRNA for SET-domain-containing protein (set1 gene) Length = 2666 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 419 aaacattaggtgagcagctgtggttcatgaagcgag 454 ||||||||||||| || || |||||||| ||||||| Sbjct: 2092 aaacattaggtgaacaactatggttcataaagcgag 2057
>gb|AC107314.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1208D02 from chromosome 10, complete sequence Length = 120132 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 tccctcatcaccatggtcat 400 |||||||||||||||||||| Sbjct: 95644 tccctcatcaccatggtcat 95625
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 tccctcatcaccatggtcat 400 |||||||||||||||||||| Sbjct: 11227524 tccctcatcaccatggtcat 11227505
>ref|NM_214384.1| Sus scrofa folylpoly-gamma-glutamate carboxypeptidase (FOLH1), mRNA Length = 2532 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gagcagctgtggttcatgaa 449 |||||||||||||||||||| Sbjct: 1321 gagcagctgtggttcatgaa 1340
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 gtatcccttaagggttgattattt 235 |||||||||||||||||| ||||| Sbjct: 3583495 gtatcccttaagggttgagtattt 3583472
>gb|AF050502.1|AF050502 Sus scrofa folylpoly-gamma-glutamate carboxypeptidase mRNA, complete cds Length = 2532 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gagcagctgtggttcatgaa 449 |||||||||||||||||||| Sbjct: 1321 gagcagctgtggttcatgaa 1340
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 tccctcatcaccatggtcat 400 |||||||||||||||||||| Sbjct: 11233964 tccctcatcaccatggtcat 11233945 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,272,189 Number of Sequences: 3902068 Number of extensions: 4272189 Number of successful extensions: 70029 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 69652 Number of HSP's gapped (non-prelim): 378 length of query: 521 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 498 effective length of database: 17,143,297,704 effective search space: 8537362256592 effective search space used: 8537362256592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)