| Clone Name | rbags1e02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY105155.1| Zea mays PCO107552 mRNA sequence Length = 1776 Score = 258 bits (130), Expect = 2e-65 Identities = 253/294 (86%) Strand = Plus / Minus Query: 317 tcagccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgcc 376 ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 1507 tcagccctcctcgccgaactccttcgtgaacctctcgtgcacctccaggtccttcttgct 1448 Query: 377 gacagtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgg 436 || ||||| |||||||||| |||||||||||||| || | ||||||| ||||| || Sbjct: 1447 aaccgtcggcctctgcctcgacaggaccttctcgaagtccgccgtcgagatagggggcgg 1388 Query: 437 gagaatctgtgaggcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacc 496 ||||||| | || ||||||||||||||||| |||||||| ||||||||||| || || Sbjct: 1387 aagaatcttcgcagcgaggcctttggatgcaagctcctgcatggtggtctgcacggcgcc 1328 Query: 497 tggttgcttcgatccacagggcatccacatgtcaccatctgtcttgaagaagtacatagc 556 |||||||||| |||||| ||||||||||||||||| || | |||||||||| |||| || Sbjct: 1327 cggttgcttcggtccacatggcatccacatgtcaccgtccgccttgaagaagaacatggc 1268 Query: 557 atcctgtgttttgcgcacaggctcaaacaacacatctttcacacagacagcaac 610 ||||| ||||||||||| || ||||||||||| || || |||||||||||||| Sbjct: 1267 gtcctgcgttttgcgcacgggttcaaacaacacgtccttaacacagacagcaac 1214
>ref|XM_550086.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1071 Score = 194 bits (98), Expect = 2e-46 Identities = 248/298 (83%) Strand = Plus / Minus Query: 321 ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 380 |||||||||||||| || || || ||| | ||||||||||||| ||| ||||||| || Sbjct: 806 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 747 Query: 381 gtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgggaga 440 |||||||||||||| |||||||| ||||||||||| || | |||||||| ||||| || Sbjct: 746 gtcggtctctgcctggcgaggactttctcgaaatctgtccttgagattggtggtggaagg 687 Query: 441 atctgtgaggcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggt 500 |||| || |||||||| |||||||| || |||||||| || || || || ||||| | | Sbjct: 686 atctttgctgcaaggcccttggatgcgagctcctgcatggttgtttgtacggcaccagat 627 Query: 501 tgcttcgatccacagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcc 560 ||||| | |||||| ||||||||||| |||||||| | ||| |||||| |||| |||||| Sbjct: 626 tgctttggtccacaaggcatccacatatcaccatcagccttaaagaagaacatggcatcc 567 Query: 561 tgtgttttgcgcacaggctcaaacaacacatctttcacacagacagcaacatcggaac 618 ||||||||||| ||||| ||||| |||||||| || ||||| ||||||| ||| |||| Sbjct: 566 tgtgttttgcggacaggttcaaataacacatcctttacacaaacagcaatatccgaac 509
>dbj|AK067644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F09, full insert sequence Length = 1755 Score = 194 bits (98), Expect = 2e-46 Identities = 248/298 (83%) Strand = Plus / Minus Query: 321 ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 380 |||||||||||||| || || || ||| | ||||||||||||| ||| ||||||| || Sbjct: 1490 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 1431 Query: 381 gtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgggaga 440 |||||||||||||| |||||||| ||||||||||| || | |||||||| ||||| || Sbjct: 1430 gtcggtctctgcctggcgaggactttctcgaaatctgtccttgagattggtggtggaagg 1371 Query: 441 atctgtgaggcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggt 500 |||| || |||||||| |||||||| || |||||||| || || || || ||||| | | Sbjct: 1370 atctttgctgcaaggcccttggatgcgagctcctgcatggttgtttgtacggcaccagat 1311 Query: 501 tgcttcgatccacagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcc 560 ||||| | |||||| ||||||||||| |||||||| | ||| |||||| |||| |||||| Sbjct: 1310 tgctttggtccacaaggcatccacatatcaccatcagccttaaagaagaacatggcatcc 1251 Query: 561 tgtgttttgcgcacaggctcaaacaacacatctttcacacagacagcaacatcggaac 618 ||||||||||| ||||| ||||| |||||||| || ||||| ||||||| ||| |||| Sbjct: 1250 tgtgttttgcggacaggttcaaataacacatcctttacacaaacagcaatatccgaac 1193
>dbj|AK062139.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F12, full insert sequence Length = 1160 Score = 194 bits (98), Expect = 2e-46 Identities = 248/298 (83%) Strand = Plus / Minus Query: 321 ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 380 |||||||||||||| || || || ||| | ||||||||||||| ||| ||||||| || Sbjct: 909 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 850 Query: 381 gtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgggaga 440 |||||||||||||| |||||||| ||||||||||| || | |||||||| ||||| || Sbjct: 849 gtcggtctctgcctggcgaggactttctcgaaatctgtccttgagattggtggtggaagg 790 Query: 441 atctgtgaggcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggt 500 |||| || |||||||| |||||||| || |||||||| || || || || ||||| | | Sbjct: 789 atctttgctgcaaggcccttggatgcgagctcctgcatggttgtttgtacggcaccagat 730 Query: 501 tgcttcgatccacagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcc 560 ||||| | |||||| ||||||||||| |||||||| | ||| |||||| |||| |||||| Sbjct: 729 tgctttggtccacaaggcatccacatatcaccatcagccttaaagaagaacatggcatcc 670 Query: 561 tgtgttttgcgcacaggctcaaacaacacatctttcacacagacagcaacatcggaac 618 ||||||||||| ||||| ||||| |||||||| || ||||| ||||||| ||| |||| Sbjct: 669 tgtgttttgcggacaggttcaaataacacatcctttacacaaacagcaatatccgaac 612
>gb|BT016886.1| Zea mays clone Contig719 mRNA sequence Length = 1304 Score = 155 bits (78), Expect = 2e-34 Identities = 138/158 (87%) Strand = Plus / Plus Query: 453 aggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggttgcttcgatcca 512 ||||||||||||||||| |||||||| ||||||||||| || || |||||||||| |||| Sbjct: 195 aggcctttggatgcaagctcctgcatggtggtctgcacggcgcccggttgcttcggtcca 254 Query: 513 cagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcctgtgttttgcgc 572 || ||||||||||||||||| || | |||||||||| |||| |||||||| ||||||||| Sbjct: 255 catggcatccacatgtcaccgtccgccttgaagaagaacatggcatcctgcgttttgcgc 314 Query: 573 acaggctcaaacaacacatctttcacacagacagcaac 610 || || ||||| ||||| || || || ||||||||||| Sbjct: 315 acgggttcaaataacacgtccttaacgcagacagcaac 352
>gb|AF499028.1| Oryza sativa (japonica cultivar-group) AAA-ATPase-like protein mRNA, complete cds Length = 1465 Score = 121 bits (61), Expect = 3e-24 Identities = 142/169 (84%) Strand = Plus / Minus Query: 450 gcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggttgcttcgat 509 |||||||| |||||||| || |||||||| || || || || ||||| | |||||| | | Sbjct: 1169 gcaaggcccttggatgcgagctcctgcatggttgtttgtacggcaccagattgctttggt 1110 Query: 510 ccacagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcctgtgttttg 569 ||||| ||||||||||| |||||||| | ||| |||||| |||| ||||||||||||||| Sbjct: 1109 ccacaaggcatccacatatcaccatcagccttaaagaagaacatggcatcctgtgttttg 1050 Query: 570 cgcacaggctcaaacaacacatctttcacacagacagcaacatcggaac 618 || ||||| ||||| |||||||| || ||||| ||||||| ||| |||| Sbjct: 1049 cggacaggttcaaataacacatcctttacacaaacagcaatatccgaac 1001 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 321 ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 380 |||||||||||||| || || || ||| | ||||||||||||| ||| ||||||| || Sbjct: 1380 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 1321 Query: 381 gtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgg 436 |||||||||||||| |||||||| ||||||||||| || | |||||||| ||||| Sbjct: 1320 gtcggtctctgcctggcgaggactttctcgaaatctgtccttgagattggtggtgg 1265
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 109 bits (55), Expect = 1e-20 Identities = 121/143 (84%) Strand = Plus / Plus Query: 450 gcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggttgcttcgat 509 |||||||| |||||||| || |||||||| || || || || ||||| | |||||| | | Sbjct: 2215138 gcaaggcccttggatgcgagctcctgcatggttgtttgtacggcaccagattgctttggt 2215197 Query: 510 ccacagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcctgtgttttg 569 ||||| ||||||||||| |||||||| | ||| |||||| |||| ||||||||||||||| Sbjct: 2215198 ccacaaggcatccacatatcaccatcagccttaaagaagaacatggcatcctgtgttttg 2215257 Query: 570 cgcacaggctcaaacaacacatc 592 || ||||| ||||| |||||||| Sbjct: 2215258 cggacaggttcaaataacacatc 2215280 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 321 ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 380 |||||||||||||| || || || ||| | ||||||||||||| ||| ||||||| || Sbjct: 2214927 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 2214986 Query: 381 gtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgg 436 |||||||||||||| |||||||| ||||||||||| || | |||||||| ||||| Sbjct: 2214987 gtcggtctctgcctggcgaggactttctcgaaatctgtccttgagattggtggtgg 2215042 Score = 42.1 bits (21), Expect = 2.1 Identities = 72/89 (80%) Strand = Plus / Plus Query: 342 gtgaacttctcgtgcacctccaggtccttcttgccgacagtcggtctctgcctcgcgagg 401 ||||||||||| | |||| | || || ||||||| || || |||||||||||| ||||| Sbjct: 2225632 gtgaacttctcatacaccactagatctttcttgctcaccgttggtctctgcctcacgagg 2225691 Query: 402 accttctcgaaatcgctcttcgagattgg 430 || | |||||||| |||| |||||||| Sbjct: 2225692 acttcatcgaaatctatctttgagattgg 2225720
>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0480E02 Length = 141862 Score = 109 bits (55), Expect = 1e-20 Identities = 121/143 (84%) Strand = Plus / Plus Query: 450 gcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggttgcttcgat 509 |||||||| |||||||| || |||||||| || || || || ||||| | |||||| | | Sbjct: 136250 gcaaggcccttggatgcgagctcctgcatggttgtttgtacggcaccagattgctttggt 136309 Query: 510 ccacagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcctgtgttttg 569 ||||| ||||||||||| |||||||| | ||| |||||| |||| ||||||||||||||| Sbjct: 136310 ccacaaggcatccacatatcaccatcagccttaaagaagaacatggcatcctgtgttttg 136369 Query: 570 cgcacaggctcaaacaacacatc 592 || ||||| ||||| |||||||| Sbjct: 136370 cggacaggttcaaataacacatc 136392 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 321 ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 380 |||||||||||||| || || || ||| | ||||||||||||| ||| ||||||| || Sbjct: 136039 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 136098 Query: 381 gtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgg 436 |||||||||||||| |||||||| ||||||||||| || | |||||||| ||||| Sbjct: 136099 gtcggtctctgcctggcgaggactttctcgaaatctgtccttgagattggtggtgg 136154
>gb|DQ444282.1| Gossypium hirsutum suppressor of K+ transport growth defect-like protein (SKD1) mRNA, complete cds Length = 1801 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 438 agaatctgtgaggcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacct 497 |||||||||| ||||| ||||||| ||| | |||||||| ||| | || ||| ||||| Sbjct: 1400 agaatctgtgctgcaagtcctttggctgccaattcctgcatggtgatttggacaacacct 1341 Query: 498 ggttgcttcgatccacagggcatccacatgtca 530 |||||||| | |||||| ||||||||||||||| Sbjct: 1340 ggttgcttgggtccacatggcatccacatgtca 1308
>gb|AF165422.2| Mesembryanthemum crystallinum salt-induced AAA-Type ATPase (SKD1) mRNA, complete cds Length = 1566 Score = 61.9 bits (31), Expect = 2e-06 Identities = 124/155 (80%) Strand = Plus / Minus Query: 464 tgcaagatcctgcatcgtggtctgcacagcacctggttgcttcgatccacagggcatcca 523 ||||||||||||||| || | || ||||||||||||||| | | ||||||||||| ||| Sbjct: 1158 tgcaagatcctgcatggttatttggacagcacctggttgccttggtccacagggcaccca 1099 Query: 524 catgtcaccatctgtcttgaagaagtacatagcatcctgtgttttgcgcacaggctcaaa 583 || ||| || |||||| ||||| |||| ||||| || ||||| || ||||| ||||| Sbjct: 1098 cacatcatcacttgtcttatagaagaacatggcatcttgggttttacgaacaggttcaaa 1039 Query: 584 caacacatctttcacacagacagcaacatcggaac 618 | ||||| || ||||| ||||||| ||| |||| Sbjct: 1038 aagtacatccttgacacaaacagcaatatctgaac 1004
>gb|AF419850.1|AF419850 Musa acuminata suppressor of K+ transport growth defect-like protein (SDK1) mRNA, partial cds Length = 1020 Score = 58.0 bits (29), Expect = 4e-05 Identities = 164/209 (78%) Strand = Plus / Minus Query: 319 agccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccga 378 ||||||| || ||||||||||| ||||| |||||||||| || ||||| |||| || Sbjct: 877 agccctcttccccaaactcctttgtgaatctctcgtgcacttcgaggtcggctttgctga 818 Query: 379 cagtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtggga 438 | || || |||||||| || | || || ||||||||| || | | ||| || ||||||| Sbjct: 817 ctgtgggcctctgcctggccaaaactttttcgaaatcgttccttgtgatgggtggtggga 758 Query: 439 gaatctgtgaggcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctg 498 | |||| | | |||| ||||| | ||||| ||||||| |||||| || ||||| |||| Sbjct: 757 ggatcttagcgccaagacctttcgcagcaagctcctgcaacgtggtttgaacagctcctg 698 Query: 499 gttgcttcgatccacagggcatccacatg 527 |||| || | ||||||||||| ||||||| Sbjct: 697 gttgtttaggtccacagggcacccacatg 669
>ref|XM_550087.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 520 tccacatgtcaccatctgtcttgaagaagtacatagcatcctgtgttttgcgcacaggct 579 ||||| ||||| | |||| ||||| |||| || | |||||||||||||| | |||||| | Sbjct: 1036 tccacgtgtcatcgtctgccttgatgaagaacttggcatcctgtgttttcctcacaggtt 977 Query: 580 caaacaacacatctttcacacagacagcaa 609 ||| ||| |||| |||||||| ||||||| Sbjct: 976 gaaataacgcatccttcacacaaacagcaa 947 Score = 42.1 bits (21), Expect = 2.1 Identities = 72/89 (80%) Strand = Plus / Minus Query: 342 gtgaacttctcgtgcacctccaggtccttcttgccgacagtcggtctctgcctcgcgagg 401 ||||||||||| | |||| | || || ||||||| || || |||||||||||| ||||| Sbjct: 1214 gtgaacttctcatacaccactagatctttcttgctcaccgttggtctctgcctcacgagg 1155 Query: 402 accttctcgaaatcgctcttcgagattgg 430 || | |||||||| |||| |||||||| Sbjct: 1154 acttcatcgaaatctatctttgagattgg 1126
>gb|BT012934.1| Lycopersicon esculentum clone 114097R, mRNA sequence Length = 1956 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 465 gcaagatcctgcatcgtggtctgcacagcacctggttgcttcg 507 ||||| |||||||| || |||||||||||||| ||||||||| Sbjct: 1544 gcaagttcctgcatagttgtctgcacagcaccccgttgcttcg 1502
>ref|NM_001037542.1| Mus musculus heat shock protein 14 (Hspa14), transcript variant 2, mRNA Length = 4369 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 481 tggtctgcacagcacctggtt 501 ||||||||||||||||||||| Sbjct: 4306 tggtctgcacagcacctggtt 4286
>emb|Z83836.2|HS111J24 Human DNA sequence from clone RP1-111J24 on chromosome 22 Contains GSSs, complete sequence Length = 119008 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 catgtcaccatctgtcttgaa 544 ||||||||||||||||||||| Sbjct: 114987 catgtcaccatctgtcttgaa 115007
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 aactccttggtgaacttctcg 353 ||||||||||||||||||||| Sbjct: 1120093 aactccttggtgaacttctcg 1120073
>gb|AC144561.8| Homo sapiens 3 BAC RP11-628C23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 35869 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 taataatcaattattccttaataca 73 |||||||||||||| |||||||||| Sbjct: 23282 taataatcaattataccttaataca 23258
>dbj|AK031579.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030456D20 product:heat shock protein, 70 kDa 4, full insert sequence Length = 4314 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 481 tggtctgcacagcacctggtt 501 ||||||||||||||||||||| Sbjct: 4251 tggtctgcacagcacctggtt 4231
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0019D06 Length = 167405 Score = 42.1 bits (21), Expect = 2.1 Identities = 72/89 (80%) Strand = Plus / Plus Query: 342 gtgaacttctcgtgcacctccaggtccttcttgccgacagtcggtctctgcctcgcgagg 401 ||||||||||| | |||| | || || ||||||| || || |||||||||||| ||||| Sbjct: 9216 gtgaacttctcatacaccactagatctttcttgctcaccgttggtctctgcctcacgagg 9275 Query: 402 accttctcgaaatcgctcttcgagattgg 430 || | |||||||| |||| |||||||| Sbjct: 9276 acttcatcgaaatctatctttgagattgg 9304
>emb|AL139021.6|CNS01DX3 Human chromosome 14 DNA sequence BAC R-517O13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176343 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 cttaatacacttgcagaaaat 85 ||||||||||||||||||||| Sbjct: 73098 cttaatacacttgcagaaaat 73078
>emb|AL732620.14| Mouse DNA sequence from clone RP23-167G19 on chromosome 2, complete sequence Length = 230116 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 tggtctgcacagcacctggtt 501 ||||||||||||||||||||| Sbjct: 215394 tggtctgcacagcacctggtt 215414
>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144, complete sequence Length = 135217 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 550 acatagcatcctgtgttttgcgcacaggctcaaacaacacatctttcac 598 |||| ||||| || |||||||| ||||| ||||| || ||||||||||| Sbjct: 58645 acatggcatcttgggttttgcgaacaggttcaaataaaacatctttcac 58597
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ttaagcacagtaagggctac 197 |||||||||||||||||||| Sbjct: 91895 ttaagcacagtaagggctac 91876
>gb|AC120020.9| Mus musculus chromosome 16, clone RP24-251L14, complete sequence Length = 153700 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 533 atctgtcttgaagaagtacatagc 556 ||||||||||||||| |||||||| Sbjct: 92379 atctgtcttgaagaaatacatagc 92356
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tgcggctgtgcatgggtcga 291 |||||||||||||||||||| Sbjct: 1976887 tgcggctgtgcatgggtcga 1976906
>ref|XM_429413.1| PREDICTED: Gallus gallus hypothetical gene supported by CR407410 (LOC416292), mRNA Length = 1707 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 ccatctgtcttgaagaagta 550 |||||||||||||||||||| Sbjct: 1679 ccatctgtcttgaagaagta 1698
>ref|NM_019827.3| Mus musculus glycogen synthase kinase 3 beta (Gsk3b), mRNA Length = 8304 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 533 atctgtcttgaagaagtacatagc 556 ||||||||||||||| |||||||| Sbjct: 1315 atctgtcttgaagaaatacatagc 1338
>gb|BC060743.1| Mus musculus glycogen synthase kinase 3 beta, mRNA (cDNA clone MGC:68385 IMAGE:4022374), complete cds Length = 2841 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 533 atctgtcttgaagaagtacatagc 556 ||||||||||||||| |||||||| Sbjct: 1244 atctgtcttgaagaaatacatagc 1267
>ref|XM_756646.1| Ustilago maydis 521 hypothetical protein (UM05592.1) partial mRNA Length = 4761 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 acatgtcaccatctgtcttg 542 |||||||||||||||||||| Sbjct: 4321 acatgtcaccatctgtcttg 4302
>gb|AC121848.3| Mus musculus BAC clone RP24-87G10 from chromosome 15, complete sequence Length = 231797 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 aagtacatagcatcctgtgttttg 569 ||||||||||||| |||||||||| Sbjct: 90722 aagtacatagcatgctgtgttttg 90745
>gb|AF181898.6| Homo sapiens chromosome 8 clone GS1-402E12 map p23, complete sequence Length = 261151 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 catacgttaagcacagtaag 191 |||||||||||||||||||| Sbjct: 75253 catacgttaagcacagtaag 75272
>gb|AC090597.9| Homo sapiens chromosome 11, clone RP11-541L7, complete sequence Length = 160210 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 aataatcaattattccttaa 69 |||||||||||||||||||| Sbjct: 103137 aataatcaattattccttaa 103156
>emb|AL133473.5| Human DNA sequence from clone RP1-236A3 on chromosome 6 Contains the 3' end of the gene for phenylalanine-tRNA synthetase (FARS1), complete sequence Length = 57423 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 ccacagggcatccacatgtc 529 |||||||||||||||||||| Sbjct: 46916 ccacagggcatccacatgtc 46935
>dbj|AK056714.1| Homo sapiens cDNA FLJ32152 fis, clone PLACE5000178, highly similar to PUTATIVE SERINE/THREONINE-PROTEIN KINASE P78 (EC 2.7.1.-) Length = 3276 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 atccacagggcatccacatg 527 |||||||||||||||||||| Sbjct: 2188 atccacagggcatccacatg 2207
>dbj|AK055814.1| Homo sapiens cDNA FLJ31252 fis, clone KIDNE2005424, highly similar to PUTATIVE SERINE/THREONINE-PROTEIN KINASE P78 (EC 2.7.1.-) Length = 3032 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 atccacagggcatccacatg 527 |||||||||||||||||||| Sbjct: 1391 atccacagggcatccacatg 1410
>gb|AC005010.2| Homo sapiens BAC clone GS1-110L19 from 8, complete sequence Length = 197498 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 catacgttaagcacagtaag 191 |||||||||||||||||||| Sbjct: 109221 catacgttaagcacagtaag 109240
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 595 tcacacagacagcaacatcg 614 |||||||||||||||||||| Sbjct: 2814179 tcacacagacagcaacatcg 2814160
>dbj|AK154293.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630015J08 product:glycogen synthase kinase 3 beta, full insert sequence Length = 2847 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 533 atctgtcttgaagaagtacatagc 556 ||||||||||||||| |||||||| Sbjct: 794 atctgtcttgaagaaatacatagc 817
>dbj|AK170965.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630213P21 product:glycogen synthase kinase 3 beta, full insert sequence Length = 2312 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 533 atctgtcttgaagaagtacatagc 556 ||||||||||||||| |||||||| Sbjct: 763 atctgtcttgaagaaatacatagc 786
>dbj|AK171482.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730219P09 product:glycogen synthase kinase 3 beta, full insert sequence Length = 1317 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 533 atctgtcttgaagaagtacatagc 556 ||||||||||||||| |||||||| Sbjct: 833 atctgtcttgaagaaatacatagc 856
>emb|CR407410.1| Gallus gallus finished cDNA, clone ChEST714h10 Length = 1347 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 ccatctgtcttgaagaagta 550 |||||||||||||||||||| Sbjct: 1319 ccatctgtcttgaagaagta 1338
>dbj|AB066114.1| Mus musculus mRNA for glycogen synthase kinase 3 beta/tau protein kinase I, complete cds Length = 8304 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 533 atctgtcttgaagaagtacatagc 556 ||||||||||||||| |||||||| Sbjct: 1315 atctgtcttgaagaaatacatagc 1338
>gb|AC100870.6| Homo sapiens chromosome 8, clone RP11-758H6, complete sequence Length = 188873 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 caacacatctttcacacaga 603 |||||||||||||||||||| Sbjct: 72352 caacacatctttcacacaga 72333
>emb|AL139300.6|CNS01DXG Human chromosome 14 DNA sequence BAC R-894P9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 191563 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 atccacagggcatccacatg 527 |||||||||||||||||||| Sbjct: 179161 atccacagggcatccacatg 179142
>emb|AL133367.4|CNS01DUS Human chromosome 14 DNA sequence BAC R-600F24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181652 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 atccacagggcatccacatg 527 |||||||||||||||||||| Sbjct: 34104 atccacagggcatccacatg 34085
>gb|AC154284.1| Mus musculus BAC clone RP23-452N24 from 16, complete sequence Length = 182088 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 533 atctgtcttgaagaagtacatagc 556 ||||||||||||||| |||||||| Sbjct: 167981 atctgtcttgaagaaatacatagc 167958 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,807,653 Number of Sequences: 3902068 Number of extensions: 4807653 Number of successful extensions: 88486 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88335 Number of HSP's gapped (non-prelim): 150 length of query: 618 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 595 effective length of database: 17,143,297,704 effective search space: 10200262133880 effective search space used: 10200262133880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)