ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY105155.1| Zea mays PCO107552 mRNA sequence 258 2e-65
2ref|XM_550086.1| Oryza sativa (japonica cultivar-group), mRNA 194 2e-46
3dbj|AK067644.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
4dbj|AK062139.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
5gb|BT016886.1| Zea mays clone Contig719 mRNA sequence 155 2e-34
6gb|AF499028.1| Oryza sativa (japonica cultivar-group) AAA-ATPase... 121 3e-24
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
8dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
9gb|DQ444282.1| Gossypium hirsutum suppressor of K+ transport gro... 66 1e-07
10gb|AF165422.2| Mesembryanthemum crystallinum salt-induced AAA-Ty... 62 2e-06
11gb|AF419850.1|AF419850 Musa acuminata suppressor of K+ transport... 58 4e-05
12ref|XM_550087.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
13gb|BT012934.1| Lycopersicon esculentum clone 114097R, mRNA sequence 46 0.14
14ref|NM_001037542.1| Mus musculus heat shock protein 14 (Hspa14),... 42 2.1
15emb|Z83836.2|HS111J24 Human DNA sequence from clone RP1-111J24 o... 42 2.1
16gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 42 2.1
17gb|AC144561.8| Homo sapiens 3 BAC RP11-628C23 (Roswell Park Canc... 42 2.1
18dbj|AK031579.1| Mus musculus 13 days embryo male testis cDNA, RI... 42 2.1
19dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
20emb|AL139021.6|CNS01DX3 Human chromosome 14 DNA sequence BAC R-5... 42 2.1
21emb|AL732620.14| Mouse DNA sequence from clone RP23-167G19 on ch... 42 2.1
22dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone... 42 2.1
23gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosom... 40 8.4
24gb|AC120020.9| Mus musculus chromosome 16, clone RP24-251L14, co... 40 8.4
25gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.4
26ref|XM_429413.1| PREDICTED: Gallus gallus hypothetical gene supp... 40 8.4
27ref|NM_019827.3| Mus musculus glycogen synthase kinase 3 beta (G... 40 8.4
28gb|BC060743.1| Mus musculus glycogen synthase kinase 3 beta, mRN... 40 8.4
29ref|XM_756646.1| Ustilago maydis 521 hypothetical protein (UM055... 40 8.4
30gb|AC121848.3| Mus musculus BAC clone RP24-87G10 from chromosome... 40 8.4
31gb|AF181898.6| Homo sapiens chromosome 8 clone GS1-402E12 map p2... 40 8.4
32gb|AC090597.9| Homo sapiens chromosome 11, clone RP11-541L7, com... 40 8.4
33emb|AL133473.5| Human DNA sequence from clone RP1-236A3 on chrom... 40 8.4
34dbj|AK056714.1| Homo sapiens cDNA FLJ32152 fis, clone PLACE50001... 40 8.4
35dbj|AK055814.1| Homo sapiens cDNA FLJ31252 fis, clone KIDNE20054... 40 8.4
36gb|AC005010.2| Homo sapiens BAC clone GS1-110L19 from 8, complet... 40 8.4
37gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 8.4
38dbj|AK154293.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.4
39dbj|AK170965.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.4
40dbj|AK171482.1| Mus musculus B6-derived CD11 +ve dendritic cells... 40 8.4
41emb|CR407410.1| Gallus gallus finished cDNA, clone ChEST714h10 40 8.4
42dbj|AB066114.1| Mus musculus mRNA for glycogen synthase kinase 3... 40 8.4
43gb|AC100870.6| Homo sapiens chromosome 8, clone RP11-758H6, comp... 40 8.4
44emb|AL139300.6|CNS01DXG Human chromosome 14 DNA sequence BAC R-8... 40 8.4
45emb|AL133367.4|CNS01DUS Human chromosome 14 DNA sequence BAC R-6... 40 8.4
46gb|AC154284.1| Mus musculus BAC clone RP23-452N24 from 16, compl... 40 8.4

>gb|AY105155.1| Zea mays PCO107552 mRNA sequence
          Length = 1776

 Score =  258 bits (130), Expect = 2e-65
 Identities = 253/294 (86%)
 Strand = Plus / Minus

                                                                        
Query: 317  tcagccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgcc 376
            ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||| 
Sbjct: 1507 tcagccctcctcgccgaactccttcgtgaacctctcgtgcacctccaggtccttcttgct 1448

                                                                        
Query: 377  gacagtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgg 436
             || ||||| ||||||||||  |||||||||||||| ||   | ||||||| ||||| ||
Sbjct: 1447 aaccgtcggcctctgcctcgacaggaccttctcgaagtccgccgtcgagatagggggcgg 1388

                                                                        
Query: 437  gagaatctgtgaggcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacc 496
             |||||||  |  || ||||||||||||||||| |||||||| ||||||||||| || ||
Sbjct: 1387 aagaatcttcgcagcgaggcctttggatgcaagctcctgcatggtggtctgcacggcgcc 1328

                                                                        
Query: 497  tggttgcttcgatccacagggcatccacatgtcaccatctgtcttgaagaagtacatagc 556
             |||||||||| |||||| ||||||||||||||||| || | |||||||||| |||| ||
Sbjct: 1327 cggttgcttcggtccacatggcatccacatgtcaccgtccgccttgaagaagaacatggc 1268

                                                                  
Query: 557  atcctgtgttttgcgcacaggctcaaacaacacatctttcacacagacagcaac 610
             ||||| ||||||||||| || ||||||||||| || || ||||||||||||||
Sbjct: 1267 gtcctgcgttttgcgcacgggttcaaacaacacgtccttaacacagacagcaac 1214



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>ref|XM_550086.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1071

 Score =  194 bits (98), Expect = 2e-46
 Identities = 248/298 (83%)
 Strand = Plus / Minus

                                                                       
Query: 321 ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 380
           |||||||||||||| || || || ||| | ||||||||||||| ||| |||||||  || 
Sbjct: 806 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 747

                                                                       
Query: 381 gtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgggaga 440
           |||||||||||||| |||||||| |||||||||||  || | |||||||| ||||| || 
Sbjct: 746 gtcggtctctgcctggcgaggactttctcgaaatctgtccttgagattggtggtggaagg 687

                                                                       
Query: 441 atctgtgaggcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggt 500
           |||| ||  |||||||| |||||||| || |||||||| || || || || ||||| | |
Sbjct: 686 atctttgctgcaaggcccttggatgcgagctcctgcatggttgtttgtacggcaccagat 627

                                                                       
Query: 501 tgcttcgatccacagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcc 560
           ||||| | |||||| ||||||||||| |||||||| | ||| |||||| |||| ||||||
Sbjct: 626 tgctttggtccacaaggcatccacatatcaccatcagccttaaagaagaacatggcatcc 567

                                                                     
Query: 561 tgtgttttgcgcacaggctcaaacaacacatctttcacacagacagcaacatcggaac 618
           ||||||||||| ||||| ||||| |||||||| || ||||| ||||||| ||| ||||
Sbjct: 566 tgtgttttgcggacaggttcaaataacacatcctttacacaaacagcaatatccgaac 509



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>dbj|AK067644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F09, full
            insert sequence
          Length = 1755

 Score =  194 bits (98), Expect = 2e-46
 Identities = 248/298 (83%)
 Strand = Plus / Minus

                                                                        
Query: 321  ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 380
            |||||||||||||| || || || ||| | ||||||||||||| ||| |||||||  || 
Sbjct: 1490 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 1431

                                                                        
Query: 381  gtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgggaga 440
            |||||||||||||| |||||||| |||||||||||  || | |||||||| ||||| || 
Sbjct: 1430 gtcggtctctgcctggcgaggactttctcgaaatctgtccttgagattggtggtggaagg 1371

                                                                        
Query: 441  atctgtgaggcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggt 500
            |||| ||  |||||||| |||||||| || |||||||| || || || || ||||| | |
Sbjct: 1370 atctttgctgcaaggcccttggatgcgagctcctgcatggttgtttgtacggcaccagat 1311

                                                                        
Query: 501  tgcttcgatccacagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcc 560
            ||||| | |||||| ||||||||||| |||||||| | ||| |||||| |||| ||||||
Sbjct: 1310 tgctttggtccacaaggcatccacatatcaccatcagccttaaagaagaacatggcatcc 1251

                                                                      
Query: 561  tgtgttttgcgcacaggctcaaacaacacatctttcacacagacagcaacatcggaac 618
            ||||||||||| ||||| ||||| |||||||| || ||||| ||||||| ||| ||||
Sbjct: 1250 tgtgttttgcggacaggttcaaataacacatcctttacacaaacagcaatatccgaac 1193



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>dbj|AK062139.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F12, full
           insert sequence
          Length = 1160

 Score =  194 bits (98), Expect = 2e-46
 Identities = 248/298 (83%)
 Strand = Plus / Minus

                                                                       
Query: 321 ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 380
           |||||||||||||| || || || ||| | ||||||||||||| ||| |||||||  || 
Sbjct: 909 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 850

                                                                       
Query: 381 gtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgggaga 440
           |||||||||||||| |||||||| |||||||||||  || | |||||||| ||||| || 
Sbjct: 849 gtcggtctctgcctggcgaggactttctcgaaatctgtccttgagattggtggtggaagg 790

                                                                       
Query: 441 atctgtgaggcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggt 500
           |||| ||  |||||||| |||||||| || |||||||| || || || || ||||| | |
Sbjct: 789 atctttgctgcaaggcccttggatgcgagctcctgcatggttgtttgtacggcaccagat 730

                                                                       
Query: 501 tgcttcgatccacagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcc 560
           ||||| | |||||| ||||||||||| |||||||| | ||| |||||| |||| ||||||
Sbjct: 729 tgctttggtccacaaggcatccacatatcaccatcagccttaaagaagaacatggcatcc 670

                                                                     
Query: 561 tgtgttttgcgcacaggctcaaacaacacatctttcacacagacagcaacatcggaac 618
           ||||||||||| ||||| ||||| |||||||| || ||||| ||||||| ||| ||||
Sbjct: 669 tgtgttttgcggacaggttcaaataacacatcctttacacaaacagcaatatccgaac 612



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>gb|BT016886.1| Zea mays clone Contig719 mRNA sequence
          Length = 1304

 Score =  155 bits (78), Expect = 2e-34
 Identities = 138/158 (87%)
 Strand = Plus / Plus

                                                                       
Query: 453 aggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggttgcttcgatcca 512
           ||||||||||||||||| |||||||| ||||||||||| || || |||||||||| ||||
Sbjct: 195 aggcctttggatgcaagctcctgcatggtggtctgcacggcgcccggttgcttcggtcca 254

                                                                       
Query: 513 cagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcctgtgttttgcgc 572
           || ||||||||||||||||| || | |||||||||| |||| |||||||| |||||||||
Sbjct: 255 catggcatccacatgtcaccgtccgccttgaagaagaacatggcatcctgcgttttgcgc 314

                                                 
Query: 573 acaggctcaaacaacacatctttcacacagacagcaac 610
           || || ||||| ||||| || || || |||||||||||
Sbjct: 315 acgggttcaaataacacgtccttaacgcagacagcaac 352



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>gb|AF499028.1| Oryza sativa (japonica cultivar-group) AAA-ATPase-like protein mRNA,
            complete cds
          Length = 1465

 Score =  121 bits (61), Expect = 3e-24
 Identities = 142/169 (84%)
 Strand = Plus / Minus

                                                                        
Query: 450  gcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggttgcttcgat 509
            |||||||| |||||||| || |||||||| || || || || ||||| | |||||| | |
Sbjct: 1169 gcaaggcccttggatgcgagctcctgcatggttgtttgtacggcaccagattgctttggt 1110

                                                                        
Query: 510  ccacagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcctgtgttttg 569
            ||||| ||||||||||| |||||||| | ||| |||||| |||| |||||||||||||||
Sbjct: 1109 ccacaaggcatccacatatcaccatcagccttaaagaagaacatggcatcctgtgttttg 1050

                                                             
Query: 570  cgcacaggctcaaacaacacatctttcacacagacagcaacatcggaac 618
            || ||||| ||||| |||||||| || ||||| ||||||| ||| ||||
Sbjct: 1049 cggacaggttcaaataacacatcctttacacaaacagcaatatccgaac 1001



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                        
Query: 321  ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 380
            |||||||||||||| || || || ||| | ||||||||||||| ||| |||||||  || 
Sbjct: 1380 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 1321

                                                                    
Query: 381  gtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgg 436
            |||||||||||||| |||||||| |||||||||||  || | |||||||| |||||
Sbjct: 1320 gtcggtctctgcctggcgaggactttctcgaaatctgtccttgagattggtggtgg 1265



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  109 bits (55), Expect = 1e-20
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                           
Query: 450     gcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggttgcttcgat 509
               |||||||| |||||||| || |||||||| || || || || ||||| | |||||| | |
Sbjct: 2215138 gcaaggcccttggatgcgagctcctgcatggttgtttgtacggcaccagattgctttggt 2215197

                                                                           
Query: 510     ccacagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcctgtgttttg 569
               ||||| ||||||||||| |||||||| | ||| |||||| |||| |||||||||||||||
Sbjct: 2215198 ccacaaggcatccacatatcaccatcagccttaaagaagaacatggcatcctgtgttttg 2215257

                                      
Query: 570     cgcacaggctcaaacaacacatc 592
               || ||||| ||||| ||||||||
Sbjct: 2215258 cggacaggttcaaataacacatc 2215280



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Plus

                                                                           
Query: 321     ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 380
               |||||||||||||| || || || ||| | ||||||||||||| ||| |||||||  || 
Sbjct: 2214927 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 2214986

                                                                       
Query: 381     gtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgg 436
               |||||||||||||| |||||||| |||||||||||  || | |||||||| |||||
Sbjct: 2214987 gtcggtctctgcctggcgaggactttctcgaaatctgtccttgagattggtggtgg 2215042



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                           
Query: 342     gtgaacttctcgtgcacctccaggtccttcttgccgacagtcggtctctgcctcgcgagg 401
               ||||||||||| | |||| | || || |||||||  || || |||||||||||| |||||
Sbjct: 2225632 gtgaacttctcatacaccactagatctttcttgctcaccgttggtctctgcctcacgagg 2225691

                                            
Query: 402     accttctcgaaatcgctcttcgagattgg 430
               || |  ||||||||  |||| ||||||||
Sbjct: 2225692 acttcatcgaaatctatctttgagattgg 2225720



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>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0480E02
          Length = 141862

 Score =  109 bits (55), Expect = 1e-20
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                          
Query: 450    gcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctggttgcttcgat 509
              |||||||| |||||||| || |||||||| || || || || ||||| | |||||| | |
Sbjct: 136250 gcaaggcccttggatgcgagctcctgcatggttgtttgtacggcaccagattgctttggt 136309

                                                                          
Query: 510    ccacagggcatccacatgtcaccatctgtcttgaagaagtacatagcatcctgtgttttg 569
              ||||| ||||||||||| |||||||| | ||| |||||| |||| |||||||||||||||
Sbjct: 136310 ccacaaggcatccacatatcaccatcagccttaaagaagaacatggcatcctgtgttttg 136369

                                     
Query: 570    cgcacaggctcaaacaacacatc 592
              || ||||| ||||| ||||||||
Sbjct: 136370 cggacaggttcaaataacacatc 136392



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Plus

                                                                          
Query: 321    ccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccgaca 380
              |||||||||||||| || || || ||| | ||||||||||||| ||| |||||||  || 
Sbjct: 136039 ccctcctcgccaaattcttttgtaaacctttcgtgcacctccaagtctttcttgctcact 136098

                                                                      
Query: 381    gtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtgg 436
              |||||||||||||| |||||||| |||||||||||  || | |||||||| |||||
Sbjct: 136099 gtcggtctctgcctggcgaggactttctcgaaatctgtccttgagattggtggtgg 136154



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>gb|DQ444282.1| Gossypium hirsutum suppressor of K+ transport growth defect-like
            protein (SKD1) mRNA, complete cds
          Length = 1801

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                        
Query: 438  agaatctgtgaggcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacct 497
            ||||||||||  ||||| ||||||| ||| |  |||||||| ||| | || ||| |||||
Sbjct: 1400 agaatctgtgctgcaagtcctttggctgccaattcctgcatggtgatttggacaacacct 1341

                                             
Query: 498  ggttgcttcgatccacagggcatccacatgtca 530
            |||||||| | |||||| |||||||||||||||
Sbjct: 1340 ggttgcttgggtccacatggcatccacatgtca 1308



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>gb|AF165422.2| Mesembryanthemum crystallinum salt-induced AAA-Type ATPase (SKD1)
            mRNA, complete cds
          Length = 1566

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 124/155 (80%)
 Strand = Plus / Minus

                                                                        
Query: 464  tgcaagatcctgcatcgtggtctgcacagcacctggttgcttcgatccacagggcatcca 523
            ||||||||||||||| ||  | || ||||||||||||||| | | ||||||||||| |||
Sbjct: 1158 tgcaagatcctgcatggttatttggacagcacctggttgccttggtccacagggcaccca 1099

                                                                        
Query: 524  catgtcaccatctgtcttgaagaagtacatagcatcctgtgttttgcgcacaggctcaaa 583
            ||  ||| ||  ||||||  ||||| |||| ||||| || ||||| || ||||| |||||
Sbjct: 1098 cacatcatcacttgtcttatagaagaacatggcatcttgggttttacgaacaggttcaaa 1039

                                               
Query: 584  caacacatctttcacacagacagcaacatcggaac 618
             |  ||||| || ||||| ||||||| ||| ||||
Sbjct: 1038 aagtacatccttgacacaaacagcaatatctgaac 1004



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>gb|AF419850.1|AF419850 Musa acuminata suppressor of K+ transport growth defect-like
           protein (SDK1) mRNA, partial cds
          Length = 1020

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 164/209 (78%)
 Strand = Plus / Minus

                                                                       
Query: 319 agccctcctcgccaaactccttggtgaacttctcgtgcacctccaggtccttcttgccga 378
           ||||||| || ||||||||||| |||||  |||||||||| || |||||    |||| ||
Sbjct: 877 agccctcttccccaaactcctttgtgaatctctcgtgcacttcgaggtcggctttgctga 818

                                                                       
Query: 379 cagtcggtctctgcctcgcgaggaccttctcgaaatcgctcttcgagattgggggtggga 438
           | || || |||||||| || |  || || ||||||||| || | | ||| || |||||||
Sbjct: 817 ctgtgggcctctgcctggccaaaactttttcgaaatcgttccttgtgatgggtggtggga 758

                                                                       
Query: 439 gaatctgtgaggcaaggcctttggatgcaagatcctgcatcgtggtctgcacagcacctg 498
           | ||||  | | |||| ||||| |  ||||| ||||||| |||||| || ||||| ||||
Sbjct: 757 ggatcttagcgccaagacctttcgcagcaagctcctgcaacgtggtttgaacagctcctg 698

                                        
Query: 499 gttgcttcgatccacagggcatccacatg 527
           |||| || | ||||||||||| |||||||
Sbjct: 697 gttgtttaggtccacagggcacccacatg 669



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>ref|XM_550087.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1437

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                        
Query: 520  tccacatgtcaccatctgtcttgaagaagtacatagcatcctgtgttttgcgcacaggct 579
            ||||| ||||| | |||| ||||| |||| || | |||||||||||||| | |||||| |
Sbjct: 1036 tccacgtgtcatcgtctgccttgatgaagaacttggcatcctgtgttttcctcacaggtt 977

                                          
Query: 580  caaacaacacatctttcacacagacagcaa 609
             ||| ||| |||| |||||||| |||||||
Sbjct: 976  gaaataacgcatccttcacacaaacagcaa 947



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                        
Query: 342  gtgaacttctcgtgcacctccaggtccttcttgccgacagtcggtctctgcctcgcgagg 401
            ||||||||||| | |||| | || || |||||||  || || |||||||||||| |||||
Sbjct: 1214 gtgaacttctcatacaccactagatctttcttgctcaccgttggtctctgcctcacgagg 1155

                                         
Query: 402  accttctcgaaatcgctcttcgagattgg 430
            || |  ||||||||  |||| ||||||||
Sbjct: 1154 acttcatcgaaatctatctttgagattgg 1126



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>gb|BT012934.1| Lycopersicon esculentum clone 114097R, mRNA sequence
          Length = 1956

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 465  gcaagatcctgcatcgtggtctgcacagcacctggttgcttcg 507
            ||||| |||||||| || ||||||||||||||  |||||||||
Sbjct: 1544 gcaagttcctgcatagttgtctgcacagcaccccgttgcttcg 1502



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>ref|NM_001037542.1| Mus musculus heat shock protein 14 (Hspa14), transcript variant 2,
            mRNA
          Length = 4369

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 481  tggtctgcacagcacctggtt 501
            |||||||||||||||||||||
Sbjct: 4306 tggtctgcacagcacctggtt 4286



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>emb|Z83836.2|HS111J24 Human DNA sequence from clone RP1-111J24 on chromosome 22 Contains GSSs,
              complete sequence
          Length = 119008

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 524    catgtcaccatctgtcttgaa 544
              |||||||||||||||||||||
Sbjct: 114987 catgtcaccatctgtcttgaa 115007



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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 333     aactccttggtgaacttctcg 353
               |||||||||||||||||||||
Sbjct: 1120093 aactccttggtgaacttctcg 1120073



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>gb|AC144561.8| Homo sapiens 3 BAC RP11-628C23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 35869

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    taataatcaattattccttaataca 73
             |||||||||||||| ||||||||||
Sbjct: 23282 taataatcaattataccttaataca 23258



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>dbj|AK031579.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:6030456D20 product:heat shock
            protein, 70 kDa 4, full insert sequence
          Length = 4314

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 481  tggtctgcacagcacctggtt 501
            |||||||||||||||||||||
Sbjct: 4251 tggtctgcacagcacctggtt 4231



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>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            clone:P0019D06
          Length = 167405

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                        
Query: 342  gtgaacttctcgtgcacctccaggtccttcttgccgacagtcggtctctgcctcgcgagg 401
            ||||||||||| | |||| | || || |||||||  || || |||||||||||| |||||
Sbjct: 9216 gtgaacttctcatacaccactagatctttcttgctcaccgttggtctctgcctcacgagg 9275

                                         
Query: 402  accttctcgaaatcgctcttcgagattgg 430
            || |  ||||||||  |||| ||||||||
Sbjct: 9276 acttcatcgaaatctatctttgagattgg 9304



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>emb|AL139021.6|CNS01DX3 Human chromosome 14 DNA sequence BAC R-517O13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176343

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    cttaatacacttgcagaaaat 85
             |||||||||||||||||||||
Sbjct: 73098 cttaatacacttgcagaaaat 73078



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>emb|AL732620.14| Mouse DNA sequence from clone RP23-167G19 on chromosome 2, complete
              sequence
          Length = 230116

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 481    tggtctgcacagcacctggtt 501
              |||||||||||||||||||||
Sbjct: 215394 tggtctgcacagcacctggtt 215414



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>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144,
             complete sequence
          Length = 135217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 550   acatagcatcctgtgttttgcgcacaggctcaaacaacacatctttcac 598
             |||| ||||| || |||||||| ||||| ||||| || |||||||||||
Sbjct: 58645 acatggcatcttgggttttgcgaacaggttcaaataaaacatctttcac 58597



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>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete
             sequence
          Length = 187080

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   ttaagcacagtaagggctac 197
             ||||||||||||||||||||
Sbjct: 91895 ttaagcacagtaagggctac 91876



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>gb|AC120020.9| Mus musculus chromosome 16, clone RP24-251L14, complete sequence
          Length = 153700

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 533   atctgtcttgaagaagtacatagc 556
             ||||||||||||||| ||||||||
Sbjct: 92379 atctgtcttgaagaaatacatagc 92356



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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 272     tgcggctgtgcatgggtcga 291
               ||||||||||||||||||||
Sbjct: 1976887 tgcggctgtgcatgggtcga 1976906



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>ref|XM_429413.1| PREDICTED: Gallus gallus hypothetical gene supported by CR407410
            (LOC416292), mRNA
          Length = 1707

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 531  ccatctgtcttgaagaagta 550
            ||||||||||||||||||||
Sbjct: 1679 ccatctgtcttgaagaagta 1698



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>ref|NM_019827.3| Mus musculus glycogen synthase kinase 3 beta (Gsk3b), mRNA
          Length = 8304

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 533  atctgtcttgaagaagtacatagc 556
            ||||||||||||||| ||||||||
Sbjct: 1315 atctgtcttgaagaaatacatagc 1338



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>gb|BC060743.1| Mus musculus glycogen synthase kinase 3 beta, mRNA (cDNA clone
            MGC:68385 IMAGE:4022374), complete cds
          Length = 2841

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 533  atctgtcttgaagaagtacatagc 556
            ||||||||||||||| ||||||||
Sbjct: 1244 atctgtcttgaagaaatacatagc 1267



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>ref|XM_756646.1| Ustilago maydis 521 hypothetical protein (UM05592.1) partial mRNA
          Length = 4761

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 523  acatgtcaccatctgtcttg 542
            ||||||||||||||||||||
Sbjct: 4321 acatgtcaccatctgtcttg 4302



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>gb|AC121848.3| Mus musculus BAC clone RP24-87G10 from chromosome 15, complete sequence
          Length = 231797

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 546   aagtacatagcatcctgtgttttg 569
             ||||||||||||| ||||||||||
Sbjct: 90722 aagtacatagcatgctgtgttttg 90745



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>gb|AF181898.6| Homo sapiens chromosome 8 clone GS1-402E12 map p23, complete sequence
          Length = 261151

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   catacgttaagcacagtaag 191
             ||||||||||||||||||||
Sbjct: 75253 catacgttaagcacagtaag 75272



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>gb|AC090597.9| Homo sapiens chromosome 11, clone RP11-541L7, complete sequence
          Length = 160210

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     aataatcaattattccttaa 69
              ||||||||||||||||||||
Sbjct: 103137 aataatcaattattccttaa 103156



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>emb|AL133473.5| Human DNA sequence from clone RP1-236A3 on chromosome 6 Contains the 3'
             end of the gene for phenylalanine-tRNA synthetase (FARS1),
             complete sequence
          Length = 57423

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 510   ccacagggcatccacatgtc 529
             ||||||||||||||||||||
Sbjct: 46916 ccacagggcatccacatgtc 46935



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>dbj|AK056714.1| Homo sapiens cDNA FLJ32152 fis, clone PLACE5000178, highly similar to
            PUTATIVE SERINE/THREONINE-PROTEIN KINASE P78 (EC 2.7.1.-)
          Length = 3276

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 508  atccacagggcatccacatg 527
            ||||||||||||||||||||
Sbjct: 2188 atccacagggcatccacatg 2207



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>dbj|AK055814.1| Homo sapiens cDNA FLJ31252 fis, clone KIDNE2005424, highly similar to
            PUTATIVE SERINE/THREONINE-PROTEIN KINASE P78 (EC 2.7.1.-)
          Length = 3032

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 508  atccacagggcatccacatg 527
            ||||||||||||||||||||
Sbjct: 1391 atccacagggcatccacatg 1410



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>gb|AC005010.2| Homo sapiens BAC clone GS1-110L19 from 8, complete sequence
          Length = 197498

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    catacgttaagcacagtaag 191
              ||||||||||||||||||||
Sbjct: 109221 catacgttaagcacagtaag 109240



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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 595     tcacacagacagcaacatcg 614
               ||||||||||||||||||||
Sbjct: 2814179 tcacacagacagcaacatcg 2814160



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>dbj|AK154293.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630015J08
           product:glycogen synthase kinase 3 beta, full insert
           sequence
          Length = 2847

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 533 atctgtcttgaagaagtacatagc 556
           ||||||||||||||| ||||||||
Sbjct: 794 atctgtcttgaagaaatacatagc 817



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>dbj|AK170965.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630213P21
           product:glycogen synthase kinase 3 beta, full insert
           sequence
          Length = 2312

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 533 atctgtcttgaagaagtacatagc 556
           ||||||||||||||| ||||||||
Sbjct: 763 atctgtcttgaagaaatacatagc 786



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>dbj|AK171482.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730219P09
           product:glycogen synthase kinase 3 beta, full insert
           sequence
          Length = 1317

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 533 atctgtcttgaagaagtacatagc 556
           ||||||||||||||| ||||||||
Sbjct: 833 atctgtcttgaagaaatacatagc 856



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>emb|CR407410.1| Gallus gallus finished cDNA, clone ChEST714h10
          Length = 1347

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 531  ccatctgtcttgaagaagta 550
            ||||||||||||||||||||
Sbjct: 1319 ccatctgtcttgaagaagta 1338



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>dbj|AB066114.1| Mus musculus mRNA for glycogen synthase kinase 3 beta/tau protein
            kinase I, complete cds
          Length = 8304

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 533  atctgtcttgaagaagtacatagc 556
            ||||||||||||||| ||||||||
Sbjct: 1315 atctgtcttgaagaaatacatagc 1338



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>gb|AC100870.6| Homo sapiens chromosome 8, clone RP11-758H6, complete sequence
          Length = 188873

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 584   caacacatctttcacacaga 603
             ||||||||||||||||||||
Sbjct: 72352 caacacatctttcacacaga 72333



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>emb|AL139300.6|CNS01DXG Human chromosome 14 DNA sequence BAC R-894P9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 191563

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 508    atccacagggcatccacatg 527
              ||||||||||||||||||||
Sbjct: 179161 atccacagggcatccacatg 179142



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>emb|AL133367.4|CNS01DUS Human chromosome 14 DNA sequence BAC R-600F24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181652

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 508   atccacagggcatccacatg 527
             ||||||||||||||||||||
Sbjct: 34104 atccacagggcatccacatg 34085



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>gb|AC154284.1| Mus musculus BAC clone RP23-452N24 from 16, complete sequence
          Length = 182088

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 533    atctgtcttgaagaagtacatagc 556
              ||||||||||||||| ||||||||
Sbjct: 167981 atctgtcttgaagaaatacatagc 167958


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,807,653
Number of Sequences: 3902068
Number of extensions: 4807653
Number of successful extensions: 88486
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88335
Number of HSP's gapped (non-prelim): 150
length of query: 618
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 595
effective length of database: 17,143,297,704
effective search space: 10200262133880
effective search space used: 10200262133880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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