| Clone Name | rbags1d23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL136090.12| Human DNA sequence from clone RP11-97N19 on chromosome 20 Contains the 5' end of the SLC24A3 gene for solute carrier family 24 (sodium/potassium/calcium exchanger) member 3, a novel gene and a CpG island, complete sequence Length = 185473 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 catactttacaccccaaaat 85 |||||||||||||||||||| Sbjct: 107110 catactttacaccccaaaat 107091
>emb|CR548643.7| Zebrafish DNA sequence from clone CH211-217H15 in linkage group 13, complete sequence Length = 90157 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 agcaaaccacaagcaaacac 32 |||||||||||||||||||| Sbjct: 21598 agcaaaccacaagcaaacac 21579
>emb|BX663524.6| Zebrafish DNA sequence from clone DKEY-97K15, complete sequence Length = 196030 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 agcaaaccacaagcaaacac 32 |||||||||||||||||||| Sbjct: 181086 agcaaaccacaagcaaacac 181067
>ref|XM_685077.1| PREDICTED: Danio rerio similar to G protein-coupled receptor 75 (LOC561668), mRNA Length = 2582 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 agcaaaccacaagcaaacac 32 |||||||||||||||||||| Sbjct: 2358 agcaaaccacaagcaaacac 2339
>gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-60d3, complete sequence Length = 100208 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cagcaaaccacaagcaaaca 31 |||||||||||||||||||| Sbjct: 15692 cagcaaaccacaagcaaaca 15711
>gb|AC116483.10| Mus musculus chromosome 1, clone RP23-424K5, complete sequence Length = 194546 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 agcaaaccacaagcaaacac 32 |||||||||||||||||||| Sbjct: 187179 agcaaaccacaagcaaacac 187160
>emb|AL928926.9| Mouse DNA sequence from clone RP23-443G7 on chromosome 2, complete sequence Length = 211456 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gacacagcagaaatgcaaag 108 |||||||||||||||||||| Sbjct: 61555 gacacagcagaaatgcaaag 61536
>emb|BX511188.7| Zebrafish DNA sequence from clone DKEY-184A17 in linkage group 13, complete sequence Length = 233525 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 agcaaaccacaagcaaacac 32 |||||||||||||||||||| Sbjct: 165029 agcaaaccacaagcaaacac 165010 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,902,319 Number of Sequences: 3902068 Number of extensions: 1902319 Number of successful extensions: 34138 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 34129 Number of HSP's gapped (non-prelim): 9 length of query: 284 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 262 effective length of database: 17,147,199,772 effective search space: 4492566340264 effective search space used: 4492566340264 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)