>YKP3_YEAST (P36058) Very hypothetical 19.6 kDa protein in RPS27A-GPM1|
           intergenic region
          Length = 169

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 17/64 (26%), Positives = 30/64 (46%)
 Frame = -3

Query: 590 QSIKSKALGSDHSVASLQEVLDGNXLKVWTDRAAEIERKGWFWDYTLFNVAIDSITVSLD 411
           Q+ +   +  DH   + Q+VL  + L VW     +  ++  FW     NV +  IT+  +
Sbjct: 74  QTSQGVTVSGDHDGLTTQQVLGNDILPVWQQSVNDQSQRFSFWQDIWVNVLVSFITLLRE 133

Query: 410 GRRA 399
            RR+
Sbjct: 134 WRRS 137

>MEGF9_HUMAN (Q9H1U4) Multiple epidermal growth factor-like domains 9 precursor|
           (EGF-like domain-containing protein 5) (Multiple
           EGF-like domain protein 5)
          Length = 600

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
 Frame = -1

Query: 496 EQQRLSAKAGSGTTRCSTWRSTASPSPWTDGGXXXXXXXX--------XRVSSPTQPTPG 341
           E   L A AG  +T   T+++   PSP T                     +S+ T P P 
Sbjct: 99  ETTPLWATAGPSST---TFQAPLGPSPTTPPAAERTSTTSQAPTRPAPTTLSTTTGPAPT 155

Query: 340 TMICTTLSTPPGTRWPSPD 284
           T + TT+  P   R P+PD
Sbjct: 156 TPVATTVPAPTTPRTPTPD 174

>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)|
          Length = 907

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/49 (34%), Positives = 18/49 (36%)
 Frame = -1

Query: 433 TASPSPWTDGGXXXXXXXXXRVSSPTQPTPGTMICTTLSTPPGTRWPSP 287
           T SPSPW +G            S  T PTP     T   T P     SP
Sbjct: 489 TPSPSPWDNGTESKAPDMTSSTSPVTTPTPNATSPTPAVTTPTPNATSP 537

>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)|
          Length = 5183

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 19/58 (32%), Positives = 24/58 (41%)
 Frame = -1

Query: 496  EQQRLSAKAGSGTTRCSTWRSTASPSPWTDGGXXXXXXXXXRVSSPTQPTPGTMICTT 323
            E +++ + AG  T + ST R T  P P    G           SS   PTP T   TT
Sbjct: 2979 ETRQVISGAGISTPQYSTARMTPPPGPQYCVGSVLRSSNGVVYSSVATPTPSTFAITT 3036

>M3K11_HUMAN (Q16584) Mitogen-activated protein kinase kinase kinase 11 (EC|
           2.7.11.25) (Mixed lineage kinase 3) (Src-homology 3
           domain-containing proline-rich kinase)
          Length = 847

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 361 PTQPTPGTMICTTLSTPPGTRWPSP 287
           PT+P P  +IC +L TP     P+P
Sbjct: 687 PTEPPPSPLICFSLKTPDSPPTPAP 711

>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 20/57 (35%), Positives = 24/57 (42%)
 Frame = -1

Query: 457  TRCSTWRSTASPSPWTDGGXXXXXXXXXRVSSPTQPTPGTMICTTLSTPPGTRWPSP 287
            T  +T   T +PSP T                 T P+P T   TT +TPP T  PSP
Sbjct: 1567 TTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPT---TTTTTPPPTTTPSP 1620

>MK07_MOUSE (Q9WVS8) Mitogen-activated protein kinase 7 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 5) (ERK-5) (BMK1
           kinase)
          Length = 806

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 14/50 (28%), Positives = 19/50 (38%)
 Frame = -1

Query: 424 PSPWTDGGXXXXXXXXXRVSSPTQPTPGTMICTTLSTPPGTRWPSPDQEG 275
           PSPW   G          +   + P P T+  T    PP +    P +EG
Sbjct: 420 PSPWAPSGDCAMESPPPALPPCSDPAPDTVDLTLQPAPPASELAPPKREG 469

>WETA_PENCH (Q01870) Regulatory protein wetA|
          Length = 499

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 29/104 (27%), Positives = 37/104 (35%), Gaps = 20/104 (19%)
 Frame = -1

Query: 484 LSAKAGSGTTRCSTWRSTASPSPWT-------DGGXXXXXXXXXRVSS------------ 362
           LS+  G      ST +   SP PW+       DG           V              
Sbjct: 44  LSSDCGDLPPTVSTPKRHQSPQPWSNEWSLQDDGAAADHFAFHDTVHPSAISDVNLNNFE 103

Query: 361 -PTQPTPGTMICTTLSTPPGTRWPSPDQEGGR*PKAQSSSRHRA 233
            P++PT    + T+ STPP T    P Q     PK   S RHR+
Sbjct: 104 VPSRPTASHGLSTSPSTPPATPRRKPTQSALITPK---SIRHRS 144

>AKH_BUCAI (P57290) Bifunctional aspartokinase/homoserine dehydrogenase|
           (AK-HD) [Includes: Aspartokinase (EC 2.7.2.4);
           Homoserine dehydrogenase (EC 1.1.1.3)]
          Length = 816

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 566 GSDHSVASLQEVLDGNXLKVWTD 498
           GSD+S A L   LD N  ++WTD
Sbjct: 207 GSDYSAAVLAACLDANCCEIWTD 229


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,718,081
Number of Sequences: 219361
Number of extensions: 1621452
Number of successful extensions: 4604
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4591
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)