ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags1d10 |
|---|---|
| Clone Library Name | barley_pub |
>EF1B_WHEAT (P29546) Elongation factor 1-beta (EF-1-beta) (Elongation factor| 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') Length = 215 Score = 161 bits (408), Expect = 9e-40 Identities = 83/92 (90%), Positives = 83/92 (90%) Frame = -3 Query: 465 SGKSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDD 286 SGKSSVLMDIKPWDDETDMKKLEEAVR VQMEGLTWGASKLMPVGYGI KLQIMLTIIDD Sbjct: 126 SGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLTIIDD 185 Query: 285 LVSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 L S T EEVLC APINEYVQSCDI AFNKI Sbjct: 186 LAS--TPIEEVLCEAPINEYVQSCDIVAFNKI 215
>EF1B_ORYSA (P29545) Elongation factor 1-beta (EF-1-beta) (Elongation factor| 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') Length = 223 Score = 159 bits (403), Expect = 3e-39 Identities = 78/92 (84%), Positives = 84/92 (91%) Frame = -3 Query: 465 SGKSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDD 286 SGKSSVL+D+KPWDDETDMKKLEEAVR VQMEGLTWGASKL+PVGYGI KLQIMLTI+DD Sbjct: 132 SGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVDD 191 Query: 285 LVSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 LVSVD+L EE L PINE+VQSCDI AFNKI Sbjct: 192 LVSVDSLIEEHLTEEPINEFVQSCDIVAFNKI 223
>EF1D2_ARATH (Q9SI20) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation| factor 1B-beta 2) (eEF-1B beta 2) Length = 231 Score = 156 bits (395), Expect = 3e-38 Identities = 76/92 (82%), Positives = 81/92 (88%) Frame = -3 Query: 465 SGKSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDD 286 SGKSSVLMDIKPWDDETDMKKLEEAVR +QMEGL WGASKL+PVGYGI KL IM TI+DD Sbjct: 140 SGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDD 199 Query: 285 LVSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 LVS+DT+ EE L PINEYVQSCDI AFNKI Sbjct: 200 LVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
>EF1D1_ARATH (P48006) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation| factor 1B-beta 1) (eEF-1B beta 1) Length = 231 Score = 154 bits (390), Expect = 1e-37 Identities = 74/92 (80%), Positives = 82/92 (89%) Frame = -3 Query: 465 SGKSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDD 286 SGKSSVL+DIKPWDDETDMKKLEEAV+ +QMEGL WGASKL+PVGYGI KLQI+ TI+DD Sbjct: 140 SGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDD 199 Query: 285 LVSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 LVS+DT+ EE L PINEYVQSCDI AFNKI Sbjct: 200 LVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
>EF1D_BETVU (O81918) Elongation factor 1-delta (EF-1-delta) (Elongation factor| 1B-beta) (eEF-1B beta) Length = 230 Score = 150 bits (379), Expect = 2e-36 Identities = 74/92 (80%), Positives = 80/92 (86%) Frame = -3 Query: 465 SGKSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDD 286 SGKSSVL+D+KPWDDETDMKKLEEAVR VQ EGLT GASKL+PVGYGI KL IM+TI+DD Sbjct: 139 SGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDD 198 Query: 285 LVSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 LVSVD L E+ L PINEYVQSCDI AFNKI Sbjct: 199 LVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 230
>EF1D1_ORYSA (Q40680) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation| factor 1B-beta 1) (eEF-1B beta 1) Length = 228 Score = 150 bits (378), Expect = 3e-36 Identities = 71/92 (77%), Positives = 80/92 (86%) Frame = -3 Query: 465 SGKSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDD 286 SGKSSVL+D+KPWDDETDM KLEEAVR V+MEGL WGASKL+PVGYGI KLQIM+TI+DD Sbjct: 137 SGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDD 196 Query: 285 LVSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 LVSVD+L E+ P NEY+QSCDI AFNKI Sbjct: 197 LVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 228
>EF1B2_ARATH (Q9SCX3) Elongation factor 1-beta 2 (EF-1-beta 2) (Elongation| factor 1B-alpha 2) (eEF-1B alpha 2) (Elongation factor 1-beta' 2) (EF-1-beta' 2) Length = 224 Score = 149 bits (375), Expect = 6e-36 Identities = 72/92 (78%), Positives = 78/92 (84%) Frame = -3 Query: 465 SGKSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDD 286 SGKSSVLMD+KPWDDETDMKKLEEAVRGV+M GL WGASKL+PVGYGI KL IM TI+DD Sbjct: 133 SGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVDD 192 Query: 285 LVSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 LVS D L E+ L P NEY+QSCDI AFNKI Sbjct: 193 LVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224
>EF1D2_ORYSA (Q40682) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation| factor 1B-beta 2) (eEF-1B beta 2) Length = 225 Score = 148 bits (374), Expect = 8e-36 Identities = 70/92 (76%), Positives = 80/92 (86%) Frame = -3 Query: 465 SGKSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDD 286 SGKSSVL+D+KPWDDETDM KLEEAVR V+MEGL WGASKL+PVGYGI KLQIM+TI+DD Sbjct: 134 SGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDD 193 Query: 285 LVSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 LVSVD+L E+ P NE++QSCDI AFNKI Sbjct: 194 LVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI 225
>EF1D_PIMBR (P93447) Elongation factor 1-delta (EF-1-delta) (Elongation factor| 1B-beta) (eEF-1B beta) Length = 225 Score = 147 bits (371), Expect = 2e-35 Identities = 70/92 (76%), Positives = 79/92 (85%) Frame = -3 Query: 465 SGKSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDD 286 SGKSSVL+D+KPWDDETDM KLEEAVR ++M+GL WGASKL+ VGYGI KLQIMLTI+DD Sbjct: 134 SGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDD 193 Query: 285 LVSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 LVSVD L E+ L P NEY+QSCDI AFNKI Sbjct: 194 LVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 225
>EF1B1_ARATH (Q84WM9) Elongation factor 1-beta 1 (EF-1-beta 1) (Elongation| factor 1B-alpha 1) (eEF-1B alpha 1) (Elongation factor 1-beta' 1) (EF-1-beta' 1) Length = 228 Score = 146 bits (368), Expect = 4e-35 Identities = 71/92 (77%), Positives = 79/92 (85%) Frame = -3 Query: 465 SGKSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDD 286 SGKSSVL+++KPWDDETDMKKLEEAVR VQM GLTWGASKL+PVGYGI KL IM+TI+DD Sbjct: 137 SGKSSVLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVDD 196 Query: 285 LVSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 LVSVD L E+ L P NEY+QS DI AFNKI Sbjct: 197 LVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228
>EF1B2_BOMMO (P29522) Elongation factor 1-beta'| Length = 221 Score = 119 bits (297), Expect = 7e-27 Identities = 58/90 (64%), Positives = 70/90 (77%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L+D+KPWDDETDMK++E VR ++MEGL WGASKL+PVGYGI KLQIM I DD V Sbjct: 135 KSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKV 194 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 SVD L E++ ++VQS DI AFNKI Sbjct: 195 SVDLLTEKI---QEFEDFVQSVDIAAFNKI 221
>EF1D_XENLA (P29693) Elongation factor 1-delta (EF-1-delta) (P36)| Length = 265 Score = 118 bits (296), Expect = 9e-27 Identities = 58/90 (64%), Positives = 67/90 (74%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L+D+KPWDDETDM KLEE VR VQM+GL WG+SKL+PVGYGI KLQI + DD V Sbjct: 179 KSSILLDVKPWDDETDMAKLEECVRTVQMDGLVWGSSKLVPVGYGIKKLQIQCVVEDDKV 238 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 D L EE+ +YVQS DI AFNKI Sbjct: 239 GTDILEEEI---TKFEDYVQSVDIAAFNKI 265
>EF1B_XENTR (Q6DET9) Elongation factor 1-beta (EF-1-beta)| Length = 227 Score = 117 bits (294), Expect = 2e-26 Identities = 56/90 (62%), Positives = 66/90 (73%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L+D+KPWDDETDM KLEE VR +QMEGL WGASKL+PVGYGI KLQI + DD V Sbjct: 141 KSSILLDVKPWDDETDMAKLEECVRSIQMEGLVWGASKLVPVGYGIKKLQIQCVVEDDKV 200 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 D L E + ++VQS D+ AFNKI Sbjct: 201 GTDVLEENI---TAFEDFVQSMDVAAFNKI 227
>EF1B_DROME (O96827) Probable elongation factor 1-beta (EF-1-beta)| Length = 221 Score = 117 bits (292), Expect = 3e-26 Identities = 57/90 (63%), Positives = 70/90 (77%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSSVL+D+KPWDDETDMK++E VR ++M+GL WGASKL+PVGYGI KLQIM I DD V Sbjct: 135 KSSVLLDVKPWDDETDMKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKV 194 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 S+D L E++ ++VQS DI AFNKI Sbjct: 195 SIDLLQEKI---EEFEDFVQSVDIAAFNKI 221
>EF1B_BOVIN (Q5E983) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 116 bits (291), Expect = 3e-26 Identities = 55/90 (61%), Positives = 67/90 (74%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L+D+KPWDDETDM KLEE VR +Q +GL WG+SKL+PVGYGI KLQI + DD V Sbjct: 138 KSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKV 197 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 D L E++ +EYVQS D+ AFNKI Sbjct: 198 GTDMLEEQI---TAFDEYVQSMDVAAFNKI 224
>EF1B_MOUSE (O70251) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 115 bits (287), Expect = 1e-25 Identities = 54/90 (60%), Positives = 66/90 (73%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L+D+KPWDDETDM KLEE VR +Q +GL WG+SKL+PVGYGI KLQI + DD V Sbjct: 138 KSSILLDVKPWDDETDMTKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKV 197 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 D L E++ +YVQS D+ AFNKI Sbjct: 198 GTDMLEEQI---TAFEDYVQSMDVAAFNKI 224
>EF1B_HUMAN (P24534) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 115 bits (287), Expect = 1e-25 Identities = 54/90 (60%), Positives = 66/90 (73%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L+D+KPWDDETDM KLEE VR +Q +GL WG+SKL+PVGYGI KLQI + DD V Sbjct: 138 KSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKV 197 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 D L E++ +YVQS D+ AFNKI Sbjct: 198 GTDMLEEQI---TAFEDYVQSMDVAAFNKI 224
>EF1B_CHICK (Q9YGQ1) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 115 bits (287), Expect = 1e-25 Identities = 54/90 (60%), Positives = 66/90 (73%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L+D+KPWDDETDM KLEE VR +Q +GL WG+SKL+PVGYGI KLQI + DD V Sbjct: 138 KSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKV 197 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 D L E++ +YVQS D+ AFNKI Sbjct: 198 GTDMLEEQI---TAFEDYVQSMDVAAFNKI 224
>EF1D_RABIT (P53787) Elongation factor 1-delta (EF-1-delta)| Length = 280 Score = 115 bits (287), Expect = 1e-25 Identities = 56/90 (62%), Positives = 66/90 (73%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L+D+KPWDDETDM +LE VR VQ++GL WGASKL+PVGYGI KLQI + DD V Sbjct: 194 KSSILLDVKPWDDETDMARLEACVRSVQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKV 253 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 D L EE+ E+VQS DI AFNKI Sbjct: 254 GTDLLEEEI---TKFEEHVQSVDIAAFNKI 280
>EF1B_RABIT (P34826) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 114 bits (286), Expect = 1e-25 Identities = 54/90 (60%), Positives = 66/90 (73%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L+D+KPWDDETDM KLEE VR +Q +GL WG+SKL+PVGYGI KLQI + DD V Sbjct: 138 KSSILLDVKPWDDETDMVKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKV 197 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 D L E++ +YVQS D+ AFNKI Sbjct: 198 GTDMLEEQI---TAFEDYVQSMDVAAFNKI 224
>EF1D_HUMAN (P29692) Elongation factor 1-delta (EF-1-delta) (Antigen NY-CO-4)| Length = 280 Score = 114 bits (285), Expect = 2e-25 Identities = 55/90 (61%), Positives = 66/90 (73%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L+D+KPWDDETDM +LE VR +Q++GL WGASKL+PVGYGI KLQI + DD V Sbjct: 194 KSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKV 253 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 D L EE+ E+VQS DI AFNKI Sbjct: 254 GTDLLEEEI---TKFEEHVQSVDIAAFNKI 280
>EF1B_XENLA (P30151) Elongation factor 1-beta (EF-1-beta) (p30)| Length = 226 Score = 114 bits (284), Expect = 2e-25 Identities = 53/90 (58%), Positives = 67/90 (74%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L+D+KPWDDETDM KLEE +R +QM+GL WG+SKL+PVGYGI KLQI + DD V Sbjct: 140 KSSILLDVKPWDDETDMGKLEECLRSIQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKV 199 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 D L E++ ++VQS D+ AFNKI Sbjct: 200 GTDVLEEKI---TAFEDFVQSMDVAAFNKI 226
>EF1D_MOUSE (P57776) Elongation factor 1-delta (EF-1-delta)| Length = 280 Score = 112 bits (280), Expect = 6e-25 Identities = 54/90 (60%), Positives = 66/90 (73%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L+D+KPWDDETDM +LE VR +Q++GL WGASKL+PVGYGI KLQI + DD V Sbjct: 194 KSSILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKV 253 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 D L EE+ E+VQS DI AF+KI Sbjct: 254 GTDLLEEEI---TKFEEHVQSVDIAAFDKI 280
>EF1B_ARTSA (P12262) Elongation factor 1-beta (EF-1-beta)| Length = 206 Score = 111 bits (277), Expect = 1e-24 Identities = 52/90 (57%), Positives = 69/90 (76%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSSV++DIKPWDDETDM ++E+ VR VQM+GL WGA+KL+P+ YGI KL IM + DD V Sbjct: 120 KSSVILDIKPWDDETDMAEMEKLVRSVQMDGLVWGAAKLIPLAYGIKKLSIMCVVEDDKV 179 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 S+D L E++ + ++VQS DI AFNK+ Sbjct: 180 SIDELQEKI---SEFEDFVQSVDIAAFNKV 206
>EF1D_ARTSA (P32192) Elongation factor 1-delta (EF-1-delta)| Length = 237 Score = 108 bits (270), Expect = 9e-24 Identities = 53/90 (58%), Positives = 65/90 (72%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L+DIKPWDDETDM +E VR + M+GL WGASKL+PV +G+ KLQI + DD V Sbjct: 151 KSSILLDIKPWDDETDMGAMEREVRSIAMDGLIWGASKLVPVAFGVKKLQISCVVEDDKV 210 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 SVD L E++ +YVQS DI AFNKI Sbjct: 211 SVDELVEKI---EAFEDYVQSVDIAAFNKI 237
>EF1B1_CAEEL (P34460) Probable elongation factor 1-beta/1-delta 1| (EF-1-beta/delta 1) Length = 213 Score = 106 bits (265), Expect = 3e-23 Identities = 52/91 (57%), Positives = 72/91 (79%), Gaps = 1/91 (1%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDL- 283 KSSV++D+KPWDDETD+ ++E+ VR ++M+GL WG +KL+P+GYGI KLQI +T+I+DL Sbjct: 126 KSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQI-ITVIEDLK 184 Query: 282 VSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 VSVD L E++ ++VQS DI AFNKI Sbjct: 185 VSVDDLIEKI--TGDFEDHVQSVDIVAFNKI 213
>EF1B2_CAEEL (Q9U2H9) Probable elongation factor 1-beta/1-delta 2| (EF-1-beta/delta 2) Length = 262 Score = 106 bits (265), Expect = 3e-23 Identities = 52/91 (57%), Positives = 72/91 (79%), Gaps = 1/91 (1%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDL- 283 KSSV++D+KPWDDETD+ ++E+ VR ++M+GL WG +KL+P+GYGI KLQI +T+I+DL Sbjct: 175 KSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQI-ITVIEDLK 233 Query: 282 VSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 VSVD L E++ ++VQS DI AFNKI Sbjct: 234 VSVDDLIEKI--TGDFEDHVQSVDIVAFNKI 262
>EF1B_SCHPO (O74173) Elongation factor 1-beta (EF-1-beta)| Length = 214 Score = 102 bits (253), Expect = 9e-22 Identities = 49/90 (54%), Positives = 65/90 (72%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KS V +D+KPWDDET M +LE+AVR +QM+GL WG SKL+PVG+G+ K QI L + DD V Sbjct: 128 KSLVTLDVKPWDDETPMDELEKAVRSIQMDGLVWGLSKLVPVGFGVNKFQINLVVEDDKV 187 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 S++ L EE+ +YVQS DI A +K+ Sbjct: 188 SLEALQEEL---EGFEDYVQSTDIAAMSKL 214
>EF1D_DROME (Q9VL18) Probable elongation factor 1-delta (EF-1-delta)| Length = 256 Score = 101 bits (251), Expect = 1e-21 Identities = 46/90 (51%), Positives = 64/90 (71%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KS++++D+KPWDDETD+K +E +R + +GL WGASK +PV +GI KL I + DD V Sbjct: 170 KSNIILDVKPWDDETDLKVMETEIRKITQDGLLWGASKFVPVAFGIQKLSISCVVEDDKV 229 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 S+D L EE+ + ++VQS DI AFNKI Sbjct: 230 SIDWLTEEI---EKLEDFVQSVDIAAFNKI 256
>EF1B_CANAL (P78590) Elongation factor 1-beta (EF-1-beta)| Length = 213 Score = 90.5 bits (223), Expect = 3e-18 Identities = 46/92 (50%), Positives = 62/92 (67%) Frame = -3 Query: 465 SGKSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDD 286 + KS V +D+KPWDDETD+ +L V+ ++MEGLTWGA + +PVG+GI KLQI L + D Sbjct: 125 AAKSIVTLDVKPWDDETDLDELLTNVKAIEMEGLTWGAHQWIPVGFGIKKLQINLVVEDA 184 Query: 285 LVSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 LVS+D L V ++VQS DI A K+ Sbjct: 185 LVSLDDLQAAV---EEDEDHVQSTDIAAMQKL 213
>EF1B_YEAST (P32471) Elongation factor 1-beta (EF-1-beta) (Translation| elongation factor 1B alpha) (Eukaryotic elongation factor 1Balpha) (eEF1Balpha) Length = 205 Score = 89.4 bits (220), Expect = 6e-18 Identities = 41/92 (44%), Positives = 63/92 (68%) Frame = -3 Query: 465 SGKSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDD 286 + KS V +D+KPWDDET+++++ V+ ++MEGLTWGA + +P+G+GI KLQI + DD Sbjct: 117 AAKSIVTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDD 176 Query: 285 LVSVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 VS+D L + + ++VQS DI A K+ Sbjct: 177 KVSLDDLQQSI---EEDEDHVQSTDIAAMQKL 205
>EF1B_TRYCR (P34827) 25 kDa elongation factor 1-beta (EF-1-beta)| Length = 222 Score = 82.4 bits (202), Expect = 7e-16 Identities = 41/90 (45%), Positives = 57/90 (63%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KSS+L D+KPWDD D++ L + V+ +GL WG KL+PV +G+ KLQ ++ I DD V Sbjct: 136 KSSILFDVKPWDDTVDLQALANKLHAVKRDGLLWGDHKLVPVAFGVKKLQQLIVIEDDKV 195 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 D L E ++ + VQS DI A+NKI Sbjct: 196 LSDDLEELIM---SFEDEVQSMDIVAWNKI 222
>EF1B_PIG (P29412) Elongation factor 1-beta (EF-1-beta)| Length = 224 Score = 77.8 bits (190), Expect = 2e-14 Identities = 40/90 (44%), Positives = 48/90 (53%) Frame = -3 Query: 459 KSSVLMDIKPWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 KS +KPWDDE M KLEE V +Q +GL L+PVGYGI DD V Sbjct: 138 KSXXXXXVKPWDDEXXMAKLEEXVXSIQADGLVXXXXXLVPVGYGIKXXXXXXXXXDDKV 197 Query: 279 SVDTLXEEVLCXAPINEYVQSCDIXAFNKI 190 D L E++ +YVQS D+ AFNKI Sbjct: 198 GTDMLEEQI---TAFEDYVQSMDVAAFNKI 224
>EF1B_ARCFU (O29681) Elongation factor 1-beta (EF-1-beta) (aEF-1beta)| Length = 88 Score = 38.1 bits (87), Expect = 0.015 Identities = 20/70 (28%), Positives = 42/70 (60%), Gaps = 3/70 (4%) Frame = -3 Query: 453 SVLMDIK--PWDDETDMKKLEEAVRGVQMEGLTWGASKLMPVGYGIXKLQIMLTIIDDLV 280 SV+M I+ P D + D+ ++ E ++ +QMEG+ S + P+ +G+ K +++ ++ D+ Sbjct: 3 SVMMKIRVMPSDVDVDLNEVLEKIKNIQMEGVEIRDSAIQPIAFGL-KAIVLMAVMPDME 61 Query: 279 SV-DTLXEEV 253 + D EE+ Sbjct: 62 GIGDRYIEEI 71
>ALG9_MOUSE (Q8VDI9) Alpha-1,2-mannosyltransferase ALG9 (EC 2.4.1.-)| (Asparagine-linked glycosylation protein 9 homolog) (Disrupted in bipolar disorder protein 1 homolog) Length = 611 Score = 31.6 bits (70), Expect = 1.4 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -1 Query: 155 FLVLGLVCLCRPI*LPLLQKCYWFCF 78 F V L+CLC + L LQKCY F F Sbjct: 373 FPVYPLICLCGAVALSALQKCYHFVF 398
>ALG9_HUMAN (Q9H6U8) Alpha-1,2-mannosyltransferase ALG9 (EC 2.4.1.-)| (Asparagine-linked glycosylation protein 9 homolog) (Disrupted in bipolar disorder protein 1) Length = 611 Score = 31.6 bits (70), Expect = 1.4 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -1 Query: 155 FLVLGLVCLCRPI*LPLLQKCYWFCF 78 F V L+CLC + L LQKCY F F Sbjct: 373 FPVYPLICLCGAVALSALQKCYHFVF 398
>RS3_LACSS (Q38UR8) 30S ribosomal protein S3| Length = 219 Score = 30.4 bits (67), Expect = 3.2 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = +1 Query: 127 QRQTNPSTKNPAATGERTKILDLVEGXDVTRLDVLVDGRLAEHFLXESVD 276 QRQ T A G +T++ + G D++R++ G + H L +D Sbjct: 133 QRQAMQRTMRAGAKGIKTQVAGRLNGADMSRIETHAQGTVPLHTLRADID 182 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,857,142 Number of Sequences: 219361 Number of extensions: 1144351 Number of successful extensions: 3038 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 2976 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3015 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
