| Clone Name | rbags1d09 |
|---|---|
| Clone Library Name | barley_pub |
>SPKC_SYNY3 (P74745) Serine/threonine-protein kinase C (EC 2.7.11.1)| Length = 535 Score = 32.3 bits (72), Expect = 0.44 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = +3 Query: 195 APSLSCRKTRTPPESASHGATDXISLVAPAALPGPRSFPSP*VTATGAXMPSIPVT 362 +PS S T +P E SL PA +P P+ PSP ++ + SIPVT Sbjct: 417 SPSPSPETTSSPTEDTITPMEPEPSLDEPAPIPEPKPSPSPTISPQPSPTISIPVT 472
>PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) Length = 1006 Score = 31.6 bits (70), Expect = 0.76 Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Frame = +3 Query: 192 KAPSLSCRK-TRTPPESASHGATDXISLVAPAALPGPRSFPSP*VTATGAXMPSI 353 ++PS R+ +R P+ +S+G++ S P+ LPGP +FP P V + +P++ Sbjct: 911 RSPSPQSRRLSRVAPDRSSNGSSRGSSEEGPSGLPGPWAFP-PAVPRSLGLLPAL 964
>PE23_MYCTU (P0A684) Hypothetical PE family protein PE23| Length = 382 Score = 30.8 bits (68), Expect = 1.3 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -3 Query: 298 GPGSAAGATRDIXSVAPWLADSGGVLV 218 G GSAA + S APWLA SGG + Sbjct: 178 GQGSAAKLATALQSAAPWLAKSGGEFI 204
>PE23_MYCBO (P0A685) Hypothetical PE family protein PE23| Length = 382 Score = 30.8 bits (68), Expect = 1.3 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -3 Query: 298 GPGSAAGATRDIXSVAPWLADSGGVLV 218 G GSAA + S APWLA SGG + Sbjct: 178 GQGSAAKLATALQSAAPWLAKSGGEFI 204
>DSX_DROME (P23023) Protein doublesex| Length = 549 Score = 30.4 bits (67), Expect = 1.7 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +1 Query: 196 HHHYHAGRREHPRNQPAME 252 HHH+H +HP QPA + Sbjct: 212 HHHHHQNHHQHPHQQPATQ 230
>KEN_DROME (O77459) Probable transcription factor Ken (Protein Ken and Barbie)| Length = 601 Score = 30.0 bits (66), Expect = 2.2 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Frame = +1 Query: 67 NDTXGQXNRKDA*THRV--LTNNPAAKTTRLSSSLCATSPYIFRKHHHYHAGRREHPRN 237 +D + N+ D T + L+N P + T+ +S++ +S + ++HHH+H + N Sbjct: 205 DDCTHKDNKSDKDTDEIVNLSNAPPSGTSGSNSNISTSSNHQQQQHHHHHHHNHNNNNN 263
>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)| Length = 515 Score = 30.0 bits (66), Expect = 2.2 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 6/38 (15%) Frame = +1 Query: 154 SSSLCATSPYIFRKHHHYHAGRRE------HPRNQPAM 249 S + ATSP + +KH +G HP NQPAM Sbjct: 73 SPGILATSPAVLQKHQQEDSGNSSQSPTSPHPSNQPAM 110
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 29.3 bits (64), Expect = 3.7 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = +3 Query: 228 PPESASHGATDXI-SLVAPAALPGPRSFPSP*VTATGAXMPSIP 356 PP SA + + S + P +P P SFP P V GA P IP Sbjct: 216 PPPSAPNPVVSSLGSGLPPPGMPPPGSFPPP-VPPPGALPPGIP 258
>PAAD_RICPR (Q9ZD09) Probable aromatic acid decarboxylase (EC 4.1.1.-)| Length = 189 Score = 28.9 bits (63), Expect = 4.9 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -2 Query: 197 CFLKIYGEVAHREEDSLVVFAAGLLVK 117 C +K +AH EDSL+ AAG+++K Sbjct: 89 CSMKTLASIAHSMEDSLISRAAGVVLK 115
>NRG2_RAT (O35569) Pro-neuregulin-2, membrane-bound isoform precursor| (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and thymus-derived activator for ERBB kinases) (NTAK)] Length = 868 Score = 28.5 bits (62), Expect = 6.4 Identities = 20/76 (26%), Positives = 35/76 (46%) Frame = +3 Query: 90 QKRRINAQGFN*QSSSEDNKTIFLSMCDLTIYL*KAPSLSCRKTRTPPESASHGATDXIS 269 +K R ++ ++ SSS + S + ++ S S R + T S+ + ++ S Sbjct: 14 EKARCSSYSYSDSSSSSSSNNSSSSTSSRSSS--RSSSRSSRGSTTTTSSSENSGSNSGS 71 Query: 270 LVAPAALPGPRSFPSP 317 + PAA P PR P P Sbjct: 72 IFRPAAPPEPRPQPQP 87
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)| Length = 1206 Score = 28.5 bits (62), Expect = 6.4 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 6/78 (7%) Frame = +1 Query: 49 KQYILVNDTXGQXNRKDA*THRVLTNNPAAK------TTRLSSSLCATSPYIFRKHHHYH 210 +Q LV+ + ++ T NN A+ T+ + + A + + HHH+H Sbjct: 251 QQQQLVSSNNSSSSSNNSFTKASSPNNNGARSVGGAATSAATGTTAAAGSHHHQPHHHHH 310 Query: 211 AGRREHPRNQPAMEQQXQ 264 H + +QQ Q Sbjct: 311 HHHHHHQHHNHQQQQQQQ 328
>YXIO_BACSU (P42306) Hypothetical protein yxiO| Length = 428 Score = 25.8 bits (55), Expect(2) = 8.2 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = -2 Query: 194 FLKIYGEVAHREEDSLVVFAAGLLVKTLCVYASFL 90 F IYG++A R +++ ++ +CVYA F+ Sbjct: 287 FSIIYGKLAERFTGKTMLYVGIVIYMIVCVYAYFM 321 Score = 20.8 bits (42), Expect(2) = 8.2 Identities = 8/24 (33%), Positives = 16/24 (66%) Frame = -3 Query: 352 IEGMXAPVAVTHGEGNDLGPGSAA 281 I+G+ + ++ G+DLG GS++ Sbjct: 249 IDGVGTIITMSTSYGSDLGIGSSS 272
>PLS3_HUMAN (Q9NRY6) Phospholipid scramblase 3 (PL scramblase 3)| (Ca(2+)-dependent phospholipid scramblase 3) Length = 295 Score = 28.1 bits (61), Expect = 8.3 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +3 Query: 231 PESASHGATDXISLVA--PAALPGPRSFPSP*VTATGAXMPSIPV 359 PE A H + A PA PG FPSP A G+ P +P+ Sbjct: 25 PEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAPFLPL 69
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +3 Query: 237 SASHGATDXISLVAPAALPGPRSFPSP*VTATGAXMP 347 + + GAT + LPGPR P P V A GA P Sbjct: 312 TGAKGATGLPGVAGAPGLPGPRGIPGP-VGAAGATGP 347
>FA18_DROME (Q8IQC1) FAM18-like protein CG5021| Length = 223 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = -1 Query: 267 ILXLLLHGWLIPGVFSSSCMIVMVLSKDIW*GRT*RGR*SCCLRCW 130 IL + GW +S +V+ LS D W + GR LR W Sbjct: 52 ILIYMFCGWFSDSFITSFVFVVLFLSADFWTVKNISGRLLVGLRWW 97 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,878,170 Number of Sequences: 219361 Number of extensions: 912280 Number of successful extensions: 3347 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 3039 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3298 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)