ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DLGP3_RAT (P97838) Disks large-associated protein 3 (DAP-3) (SAP... 33 0.82
2DLGP3_MOUSE (Q6PFD5) Disks large-associated protein 3 (DAP-3) (S... 33 0.82
3DLGP3_HUMAN (O95886) Disks large-associated protein 3 (DAP-3) (S... 33 0.82
4A37C_DROLE (O96570) Protein anon-37Cs 32 2.4
5IBBC2_SOYBN (P01063) Bowman-Birk type proteinase inhibitor C-II ... 31 3.1
6INCE_HUMAN (Q9NQS7) Inner centromere protein 31 3.1
7MAG_RAT (P07722) Myelin-associated glycoprotein precursor (Sigle... 30 5.3
8MAG_MOUSE (P20917) Myelin-associated glycoprotein precursor (Sig... 30 5.3
9MAG_HUMAN (P20916) Myelin-associated glycoprotein precursor (Sig... 30 6.9
10HHIP_HUMAN (Q96QV1) Hedgehog-interacting protein precursor (HHIP... 30 9.0

>DLGP3_RAT (P97838) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 977

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = -1

Query: 544 ESSKLPDKKPASSVVVSVLADPREAGDGDSDPRMTPKSLSRIFVVVLLDGVRYVTYSCTL 365
           +  ++P ++  S   +  + D  E+GD D  P+ +PK+L+R F       V     +C +
Sbjct: 381 KDGEIPCRRMRSGSYIKAMGD-EESGDSDGSPKTSPKALARRFASRRSSSVDTARINCCV 439

Query: 364 P 362
           P
Sbjct: 440 P 440



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>DLGP3_MOUSE (Q6PFD5) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 977

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = -1

Query: 544 ESSKLPDKKPASSVVVSVLADPREAGDGDSDPRMTPKSLSRIFVVVLLDGVRYVTYSCTL 365
           +  ++P ++  S   +  + D  E+GD D  P+ +PK+L+R F       V     +C +
Sbjct: 381 KDGEIPCRRMRSGSYIKAMGD-EESGDSDGSPKTSPKALARRFASRRSSSVDTARINCCV 439

Query: 364 P 362
           P
Sbjct: 440 P 440



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>DLGP3_HUMAN (O95886) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 979

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 15/61 (24%), Positives = 30/61 (49%)
 Frame = -1

Query: 544 ESSKLPDKKPASSVVVSVLADPREAGDGDSDPRMTPKSLSRIFVVVLLDGVRYVTYSCTL 365
           +  ++P ++  S   +  + D  E+GD D  P+ +PK+++R F       V     +C +
Sbjct: 383 KDGEIPCRRMRSGSYIKAMGD-EESGDSDGSPKTSPKAVARRFTTRRSSSVDQARINCCV 441

Query: 364 P 362
           P
Sbjct: 442 P 442



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>A37C_DROLE (O96570) Protein anon-37Cs|
          Length = 544

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -1

Query: 649 AYYGKLKNRRIMYNEAAIPLTGKTVNNTEPFNRTSESSKLPDKKPASSVVV 497
           ++ G    RR +YN  A+ + G++VNN+   N   +   L   K  + +VV
Sbjct: 14  SFSGYKLTRRNLYNAPALKVMGRSVNNSSSNNNDQQQYNLESAKQNTQIVV 64



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>IBBC2_SOYBN (P01063) Bowman-Birk type proteinase inhibitor C-II precursor|
          Length = 83

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -3

Query: 452 SEDDSEVPLQDICCCS---P*WCQICHILLHSSFQECQSSSCKLTNNHGGRC 306
           S+D+S  P  D+C C+   P  C    I L+S    C   +C  T +  G+C
Sbjct: 13  SDDESSKPCCDLCMCTASMPPQCHCADIRLNSCHSACDRCAC--TRSMPGQC 62



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>INCE_HUMAN (Q9NQS7) Inner centromere protein|
          Length = 923

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -1

Query: 574 NNTEPFNRTSESSKLPDKKPASSVVVSVLADPREAGDGDSD-PRMTPKSLSR 422
           NN+ P N T  ++  P+ KPA+S   +  A  +EA    +D PR  P+S  R
Sbjct: 398 NNSWPHNDTEIANSTPNPKPAASSPETPSAGQQEAKTDQADGPREPPQSARR 449



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>MAG_RAT (P07722) Myelin-associated glycoprotein precursor (Siglec-4a)|
           (Brain neuron cytoplasmic protein 3)
          Length = 626

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +3

Query: 276 PIKLLENHDDTSTPMIIC*FTR*GLALLKGRVQEYVTYLTPSRRTTTNILERDF 437
           PI LLE+H   +   + C      L ++K   +  V +  PSR  T N  ER+F
Sbjct: 413 PIILLESHCAAARDTVQC------LCVVKSNPEPSVAFELPSRNVTVNETEREF 460



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>MAG_MOUSE (P20917) Myelin-associated glycoprotein precursor (Siglec-4a)|
          Length = 626

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +3

Query: 276 PIKLLENHDDTSTPMIIC*FTR*GLALLKGRVQEYVTYLTPSRRTTTNILERDF 437
           PI LLE+H   +   + C      L ++K   +  V +  PSR  T N  ER+F
Sbjct: 413 PIILLESHCAAARDTVQC------LCVVKSNPEPSVAFELPSRNVTVNETEREF 460



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>MAG_HUMAN (P20916) Myelin-associated glycoprotein precursor (Siglec-4a)|
          Length = 626

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +3

Query: 276 PIKLLENHDDTSTPMIIC*FTR*GLALLKGRVQEYVTYLTPSRRTTTNILERDF 437
           P+ LLE+H   +   + C      L ++K   +  V +  PSR  T N  ER+F
Sbjct: 413 PVLLLESHCAAARDTVQC------LCVVKSNPEPSVAFELPSRNVTVNESEREF 460



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>HHIP_HUMAN (Q96QV1) Hedgehog-interacting protein precursor (HHIP) (HIP)|
          Length = 700

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -3

Query: 416 CCCSP*WCQICHILLHSSFQECQSSSCKLTNNHGGRCV 303
           CCCSP W           F  C+++ C+    HGG CV
Sbjct: 623 CCCSPGW--------EGDF--CRTAKCEPACRHGGVCV 650


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,238,533
Number of Sequences: 219361
Number of extensions: 1826155
Number of successful extensions: 4076
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4073
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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