| Clone Name | rbags1d08 |
|---|---|
| Clone Library Name | barley_pub |
>DLGP3_RAT (P97838) Disks large-associated protein 3 (DAP-3)| (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 977 Score = 33.1 bits (74), Expect = 0.82 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = -1 Query: 544 ESSKLPDKKPASSVVVSVLADPREAGDGDSDPRMTPKSLSRIFVVVLLDGVRYVTYSCTL 365 + ++P ++ S + + D E+GD D P+ +PK+L+R F V +C + Sbjct: 381 KDGEIPCRRMRSGSYIKAMGD-EESGDSDGSPKTSPKALARRFASRRSSSVDTARINCCV 439 Query: 364 P 362 P Sbjct: 440 P 440
>DLGP3_MOUSE (Q6PFD5) Disks large-associated protein 3 (DAP-3)| (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 977 Score = 33.1 bits (74), Expect = 0.82 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = -1 Query: 544 ESSKLPDKKPASSVVVSVLADPREAGDGDSDPRMTPKSLSRIFVVVLLDGVRYVTYSCTL 365 + ++P ++ S + + D E+GD D P+ +PK+L+R F V +C + Sbjct: 381 KDGEIPCRRMRSGSYIKAMGD-EESGDSDGSPKTSPKALARRFASRRSSSVDTARINCCV 439 Query: 364 P 362 P Sbjct: 440 P 440
>DLGP3_HUMAN (O95886) Disks large-associated protein 3 (DAP-3)| (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 979 Score = 33.1 bits (74), Expect = 0.82 Identities = 15/61 (24%), Positives = 30/61 (49%) Frame = -1 Query: 544 ESSKLPDKKPASSVVVSVLADPREAGDGDSDPRMTPKSLSRIFVVVLLDGVRYVTYSCTL 365 + ++P ++ S + + D E+GD D P+ +PK+++R F V +C + Sbjct: 383 KDGEIPCRRMRSGSYIKAMGD-EESGDSDGSPKTSPKAVARRFTTRRSSSVDQARINCCV 441 Query: 364 P 362 P Sbjct: 442 P 442
>A37C_DROLE (O96570) Protein anon-37Cs| Length = 544 Score = 31.6 bits (70), Expect = 2.4 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = -1 Query: 649 AYYGKLKNRRIMYNEAAIPLTGKTVNNTEPFNRTSESSKLPDKKPASSVVV 497 ++ G RR +YN A+ + G++VNN+ N + L K + +VV Sbjct: 14 SFSGYKLTRRNLYNAPALKVMGRSVNNSSSNNNDQQQYNLESAKQNTQIVV 64
>IBBC2_SOYBN (P01063) Bowman-Birk type proteinase inhibitor C-II precursor| Length = 83 Score = 31.2 bits (69), Expect = 3.1 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = -3 Query: 452 SEDDSEVPLQDICCCS---P*WCQICHILLHSSFQECQSSSCKLTNNHGGRC 306 S+D+S P D+C C+ P C I L+S C +C T + G+C Sbjct: 13 SDDESSKPCCDLCMCTASMPPQCHCADIRLNSCHSACDRCAC--TRSMPGQC 62
>INCE_HUMAN (Q9NQS7) Inner centromere protein| Length = 923 Score = 31.2 bits (69), Expect = 3.1 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = -1 Query: 574 NNTEPFNRTSESSKLPDKKPASSVVVSVLADPREAGDGDSD-PRMTPKSLSR 422 NN+ P N T ++ P+ KPA+S + A +EA +D PR P+S R Sbjct: 398 NNSWPHNDTEIANSTPNPKPAASSPETPSAGQQEAKTDQADGPREPPQSARR 449
>MAG_RAT (P07722) Myelin-associated glycoprotein precursor (Siglec-4a)| (Brain neuron cytoplasmic protein 3) Length = 626 Score = 30.4 bits (67), Expect = 5.3 Identities = 18/54 (33%), Positives = 26/54 (48%) Frame = +3 Query: 276 PIKLLENHDDTSTPMIIC*FTR*GLALLKGRVQEYVTYLTPSRRTTTNILERDF 437 PI LLE+H + + C L ++K + V + PSR T N ER+F Sbjct: 413 PIILLESHCAAARDTVQC------LCVVKSNPEPSVAFELPSRNVTVNETEREF 460
>MAG_MOUSE (P20917) Myelin-associated glycoprotein precursor (Siglec-4a)| Length = 626 Score = 30.4 bits (67), Expect = 5.3 Identities = 18/54 (33%), Positives = 26/54 (48%) Frame = +3 Query: 276 PIKLLENHDDTSTPMIIC*FTR*GLALLKGRVQEYVTYLTPSRRTTTNILERDF 437 PI LLE+H + + C L ++K + V + PSR T N ER+F Sbjct: 413 PIILLESHCAAARDTVQC------LCVVKSNPEPSVAFELPSRNVTVNETEREF 460
>MAG_HUMAN (P20916) Myelin-associated glycoprotein precursor (Siglec-4a)| Length = 626 Score = 30.0 bits (66), Expect = 6.9 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +3 Query: 276 PIKLLENHDDTSTPMIIC*FTR*GLALLKGRVQEYVTYLTPSRRTTTNILERDF 437 P+ LLE+H + + C L ++K + V + PSR T N ER+F Sbjct: 413 PVLLLESHCAAARDTVQC------LCVVKSNPEPSVAFELPSRNVTVNESEREF 460
>HHIP_HUMAN (Q96QV1) Hedgehog-interacting protein precursor (HHIP) (HIP)| Length = 700 Score = 29.6 bits (65), Expect = 9.0 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = -3 Query: 416 CCCSP*WCQICHILLHSSFQECQSSSCKLTNNHGGRCV 303 CCCSP W F C+++ C+ HGG CV Sbjct: 623 CCCSPGW--------EGDF--CRTAKCEPACRHGGVCV 650 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,238,533 Number of Sequences: 219361 Number of extensions: 1826155 Number of successful extensions: 4076 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3917 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4073 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6825954960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)