ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TRI46_MOUSE (Q7TNM2) Tripartite motif protein 46 (Tripartite, fi... 30 3.7
2TRI46_HUMAN (Q7Z4K8) Tripartite motif protein 46 (Tripartite, fi... 30 3.7

>TRI46_MOUSE (Q7TNM2) Tripartite motif protein 46 (Tripartite, fibronectin|
           type-III and C-terminal SPRY motif protein)
          Length = 759

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +2

Query: 263 PPHDLAVWRYCRWWRSVKVPAAIAAVNGSPGPRRWR 370
           PPH    W Y   +R   VPA        PGP RW+
Sbjct: 453 PPHSPPAWHYTVEFRRTDVPA-------QPGPTRWQ 481



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>TRI46_HUMAN (Q7Z4K8) Tripartite motif protein 46 (Tripartite, fibronectin|
           type-III and C-terminal SPRY motif protein)
          Length = 759

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +2

Query: 263 PPHDLAVWRYCRWWRSVKVPAAIAAVNGSPGPRRWR 370
           PPH    W Y   +R   VPA        PGP RW+
Sbjct: 453 PPHSPPAWHYTVEFRRTDVPA-------QPGPTRWQ 481


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,639,733
Number of Sequences: 219361
Number of extensions: 1226373
Number of successful extensions: 3335
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3335
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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