ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB011442.1| Triticum aestivum WESR1 mRNA, partial sequence 611 e-171
2dbj|AK104255.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
3dbj|AK104143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
4dbj|AK066226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
6dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
7dbj|AK063475.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
8ref|XM_465955.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
10dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
11dbj|AK103266.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 56 1e-04
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
14gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
15dbj|AK109114.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
16ref|NM_190168.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
17gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
18dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
19dbj|AK099531.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
20dbj|AK067960.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
21gb|AY105503.1| Zea mays PCO075069 mRNA sequence 48 0.032
22dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
23dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
24gb|AY110499.1| Zea mays CL35055_1 mRNA sequence 46 0.13
25ref|XM_465111.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.50
26ref|XM_507468.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.50
27ref|XM_507467.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.50
28ref|XM_506777.2| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.50
29dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
30dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
31dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
32dbj|AK104467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.50
33dbj|AK104411.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.50
34dbj|AK100174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.50
35dbj|AK071676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.50
36gb|AY106071.1| Zea mays PCO141993 mRNA sequence 44 0.50
37ref|XM_483522.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
38ref|XM_507308.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 2.0
39gb|BT018599.1| Zea mays clone EL01N0449A02.d mRNA sequence 42 2.0
40gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 42 2.0
41gb|AC164627.4| Mus musculus 10 BAC RP23-382A18 (Roswell Park Can... 42 2.0
42dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 42 2.0
43dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
44dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
45dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
46dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
47dbj|AK106127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
48dbj|AK070510.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
49emb|Z37093.2|CEZK669 Caenorhabditis elegans Cosmid ZK669, comple... 42 2.0
50gb|AC164629.14| Mus musculus 10 BAC RP23-16N3 (Roswell Park Canc... 42 2.0
51ref|NM_113718.2| Arabidopsis thaliana unknown protein AT3G28007 ... 40 7.8
52ref|XM_475994.1| Oryza sativa (japonica cultivar-group), predic... 40 7.8
53ref|NM_192689.1| Oryza sativa (japonica cultivar-group), predic... 40 7.8
54gb|AC150574.2| Bos taurus BAC CH240-237H4 (Children's Hospital ... 40 7.8
55ref|XM_956449.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.8
56gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
57ref|XM_326668.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.8
58gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
59gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete seq... 40 7.8
60gb|AY811319.1| Schistosoma japonicum SJCHGC04153 protein mRNA, p... 40 7.8
61ref|XM_549052.2| PREDICTED: Canis familiaris similar to StAR-rel... 40 7.8
62ref|XM_948078.1| Theileria annulata strain Ankara elongation fac... 40 7.8
63gb|AY596246.1| Helicobacter sp. 'Flexispira taxon 10' 23S riboso... 40 7.8
64gb|AC156574.2| Mus musculus BAC clone RP23-54L14 from chromosome... 40 7.8
65emb|AL670010.1|NCB10H4 Neurospora crassa DNA linkage group V BAC... 40 7.8
66emb|AL670009.1|NC123A4 Neurospora crassa DNA linkage group V cos... 40 7.8
67gb|AF428275.1|AF428275 Arabidopsis thaliana unknown protein mRNA... 40 7.8
68gb|AF339161.1|AF339161 Tupaia glis mannose-6-phosphate/insulin-l... 40 7.8
69dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
70emb|BX822431.1|CNS0A77F Arabidopsis thaliana Full-length cDNA Co... 40 7.8
71gb|AC108057.3| Homo sapiens BAC clone RP11-374N13 from 2, comple... 40 7.8
72gb|AY086230.1| Arabidopsis thaliana clone 22745 mRNA, complete s... 40 7.8
73dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
74dbj|AK118293.1| Arabidopsis thaliana At3g28007 mRNA for unknown ... 40 7.8
75dbj|AB028616.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 7.8
76gb|BT002215.1| Arabidopsis thaliana At3g28008/At3g28008 mRNA, co... 40 7.8
77dbj|AK069614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
78gb|AY110564.1| Zea mays CL2950_2 mRNA sequence 40 7.8
79gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
80emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb... 40 7.8
81emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.8
82gb|AC147447.3| Gallus gallus BAC clone CH261-9P3 from chromosome... 40 7.8
83emb|CT025564.10| Mouse DNA sequence from clone RP24-123J6 on chr... 40 7.8
84emb|AL928726.5| Mouse DNA sequence from clone RP23-397A11 on chr... 40 7.8
85emb|AL671478.9| Mouse DNA sequence from clone RP23-110A15 on chr... 40 7.8
86emb|AL845172.3| Mouse DNA sequence from clone RP23-285J17 on chr... 40 7.8
87emb|AJ307488.1|MMU307488 Mus musculus partial 17.2.25-D-Jh4 gene... 40 7.8 
>dbj|AB011442.1| Triticum aestivum WESR1 mRNA, partial sequence
          Length = 543

 Score =  611 bits (308), Expect = e-171
 Identities = 422/457 (92%), Gaps = 10/457 (2%)
 Strand = Plus / Minus

                                                                       
Query: 124 aaaacaatatgaacaaatgactngaggaccttagaactagcacta-----gctttttaca 178
           |||||||||| ||||||||||| |||||||||| |||||||||||     ||||||||||
Sbjct: 542 aaaacaatataaacaaatgactcgaggacctta-aactagcactactccagctttttaca 484

                                                                       
Query: 179 taagcaaaataatgcagacaacctcaaccctgagctgcaggcaggctgtaggcttacagc 238
           ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 taaacaaaataatgcagagaacctcaaccctgagctgcaggcaggctgtaggcttacagc 424

                                                                       
Query: 239 gatggctgtactgtacatgccctaagaatcatccatcttgtttatcttgcctgctcatgt 298
           |||||||||||||||||||||||| |||||||||||||| ||  |||||| |||||||||
Sbjct: 423 gatggctgtactgtacatgccctaggaatcatccatcttcttg-tcttgcatgctcatgt 365

                                                                       
Query: 299 atgtgtgactagtaatggccgtctggcttcgtctctcgacccttttct---gtagtacgc 355
           ||||||||||||||||||||||||||||||||||||||| || |||||   |||||| ||
Sbjct: 364 atgtgtgactagtaatggccgtctggcttcgtctctcgatccctttctactgtagtaggc 305

                                                                       
Query: 356 atataacaacagctgtacgacacctaagactgtgccaacgccattgggaacatatatgaa 415
           ||||||||||| ||||| |||||||| ||||||||| | |||||||||||| ||||||||
Sbjct: 304 atataacaacaactgtatgacacctaggactgtgccgatgccattgggaacgtatatgaa 245

                                                                       
Query: 416 gaagtcatccagaagcgccccgtatgcgaaaaatgacacactcatcagggacatcgatag 475
           |||||||||||||||| |||||||||||||||| ||||  ||||||||||||||||||||
Sbjct: 244 gaagtcatccagaagcaccccgtatgcgaaaaacgacatgctcatcagggacatcgatag 185

                                                                       
Query: 476 ggacaaataaaatggcatgtactccacgctcttggtcctgatcaccaaattaatgatgga 535
            ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 184 cgacaaataaaagggcatgtactccacactcttggtcctgatcaccaaattaatgatgga 125

                                                
Query: 536 cagaggggaggcgaacatgaatatgagggacgccacg 572
           ||||||||| |||||||||||||||||||||||||||
Sbjct: 124 cagaggggatgcgaacatgaatatgagggacgccacg 88
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>dbj|AK104255.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D11, full
           insert sequence
          Length = 1168

 Score =  137 bits (69), Expect = 4e-29
 Identities = 227/279 (81%), Gaps = 3/279 (1%)
 Strand = Plus / Minus

                                                                       
Query: 290 tgctcatgtatgtgtgactagtaatggccgtctggcttcgtctctcgacccttttctgta 349
           ||||||||||||||||||||| |||||  | |||   || ||||| || ||||||||| |
Sbjct: 881 tgctcatgtatgtgtgactagcaatgggaggctg---tcctctcttgatccttttctgaa 825

                                                                       
Query: 350 gtacgcatataacaacagctgtacgacacctaagactgtgccaacgccattgggaacata 409
           |||  |||| | || ||  || | |||||| || || || ||||  ||||| |||| |||
Sbjct: 824 gtagccatagagcaccaattgaatgacacccaaaacggttccaatcccatttggaatata 765

                                                                       
Query: 410 tatgaagaagtcatccagaagcgccccgtatgcgaaaaatgacacactcatcagggacat 469
           ||||||||| |||| ||| ||  | || |||||||| || || || ||||||| | ||||
Sbjct: 764 tatgaagaaatcatgcagtagaactccatatgcgaagaacgatacgctcatcaagaacat 705

                                                                       
Query: 470 cgatagggacaaataaaatggcatgtactccacgctcttggtcctgatcaccaaattaat 529
            || || |||||||| || |||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 704 agagagtgacaaatagaagggcatgtactccacgctcttcgtcctgatcaccagattaat 645

                                                  
Query: 530 gatggacagaggggaggcgaacatgaatatgagggacgc 568
           ||||||||  ||||| || ||||||||||||||||||||
Sbjct: 644 gatggacaagggggacgcaaacatgaatatgagggacgc 606
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>dbj|AK104143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-G10, full
           insert sequence
          Length = 1096

 Score =  137 bits (69), Expect = 4e-29
 Identities = 227/279 (81%), Gaps = 3/279 (1%)
 Strand = Plus / Minus

                                                                       
Query: 290 tgctcatgtatgtgtgactagtaatggccgtctggcttcgtctctcgacccttttctgta 349
           ||||||||||||||||||||| |||||  | |||   || ||||| || ||||||||| |
Sbjct: 885 tgctcatgtatgtgtgactagcaatgggaggctg---tcctctcttgatccttttctgaa 829

                                                                       
Query: 350 gtacgcatataacaacagctgtacgacacctaagactgtgccaacgccattgggaacata 409
           |||  |||| | || ||  || | |||||| || || || ||||  ||||| |||| |||
Sbjct: 828 gtagccatagagcaccaattgaatgacacccaaaacggttccaatcccatttggaatata 769

                                                                       
Query: 410 tatgaagaagtcatccagaagcgccccgtatgcgaaaaatgacacactcatcagggacat 469
           ||||||||| |||| ||| ||  | || |||||||| || || || ||||||| | ||||
Sbjct: 768 tatgaagaaatcatgcagtagaactccatatgcgaagaacgatacgctcatcaagaacat 709

                                                                       
Query: 470 cgatagggacaaataaaatggcatgtactccacgctcttggtcctgatcaccaaattaat 529
            || || |||||||| || |||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 708 agagagtgacaaatagaagggcatgtactccacgctcttcgtcctgatcaccagattaat 649

                                                  
Query: 530 gatggacagaggggaggcgaacatgaatatgagggacgc 568
           ||||||||  ||||| || ||||||||||||||||||||
Sbjct: 648 gatggacaagggggacgcaaacatgaatatgagggacgc 610
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>dbj|AK066226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057K13, full
           insert sequence
          Length = 1213

 Score =  137 bits (69), Expect = 4e-29
 Identities = 227/279 (81%), Gaps = 3/279 (1%)
 Strand = Plus / Minus

                                                                       
Query: 290 tgctcatgtatgtgtgactagtaatggccgtctggcttcgtctctcgacccttttctgta 349
           ||||||||||||||||||||| |||||  | |||   || ||||| || ||||||||| |
Sbjct: 886 tgctcatgtatgtgtgactagcaatgggaggctg---tcctctcttgatccttttctgaa 830

                                                                       
Query: 350 gtacgcatataacaacagctgtacgacacctaagactgtgccaacgccattgggaacata 409
           |||  |||| | || ||  || | |||||| || || || ||||  ||||| |||| |||
Sbjct: 829 gtagccatagagcaccaattgaatgacacccaaaacggttccaatcccatttggaatata 770

                                                                       
Query: 410 tatgaagaagtcatccagaagcgccccgtatgcgaaaaatgacacactcatcagggacat 469
           ||||||||| |||| ||| ||  | || |||||||| || || || ||||||| | ||||
Sbjct: 769 tatgaagaaatcatgcagtagaactccatatgcgaagaacgatacgctcatcaagaacat 710

                                                                       
Query: 470 cgatagggacaaataaaatggcatgtactccacgctcttggtcctgatcaccaaattaat 529
            || || |||||||| || |||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 709 agagagtgacaaatagaagggcatgtactccacgctcttcgtcctgatcaccagattaat 650

                                                  
Query: 530 gatggacagaggggaggcgaacatgaatatgagggacgc 568
           ||||||||  ||||| || ||||||||||||||||||||
Sbjct: 649 gatggacaagggggacgcaaacatgaatatgagggacgc 611
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                            
Query: 405      acatatatgaagaagtcatccagaagcgccccgtatgcgaaaaatgacacactcatcagg 464
                |||||||||||||| |||| ||| ||  | || |||||||| || || || ||||||| |
Sbjct: 19957518 acatatatgaagaaatcatgcagtagaactccatatgcgaagaacgatacgctcatcaag 19957459

                                                                          
Query: 465      gacatcgatagggacaaataaaatggcatgtactccacgctcttggtcctgatcacca 522
                 |||| || || |||||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 19957458 aacatagagagtgacaaatagaagggcatgtactccacgctcttcgtcctgatcacca 19957401



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                          
Query: 527      aatgatggacagaggggaggcgaacatgaatatgagggacgc 568
                |||||||||||  ||||| || ||||||||||||||||||||
Sbjct: 19957221 aatgatggacaagggggacgcaaacatgaatatgagggacgc 19957180



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 290      tgctcatgtatgtgtgactagtaatgg 316
                ||||||||||||||||||||| |||||
Sbjct: 19957722 tgctcatgtatgtgtgactagcaatgg 19957696



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 489      ggcatgtactccacgctcttggtcctgatcacca 522
                |||||| ||||||||||||| ||| |||||||||
Sbjct: 38249738 ggcatgaactccacgctcttcgtcttgatcacca 38249705



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 489      ggcatgtactccacgctctt 508
                ||||||||||||||||||||
Sbjct: 23876074 ggcatgtactccacgctctt 23876055
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>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0062A24
          Length = 148362

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                         
Query: 405   acatatatgaagaagtcatccagaagcgccccgtatgcgaaaaatgacacactcatcagg 464
             |||||||||||||| |||| ||| ||  | || |||||||| || || || ||||||| |
Sbjct: 60427 acatatatgaagaaatcatgcagtagaactccatatgcgaagaacgatacgctcatcaag 60368

                                                                       
Query: 465   gacatcgatagggacaaataaaatggcatgtactccacgctcttggtcctgatcacca 522
              |||| || || |||||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 60367 aacatagagagtgacaaatagaagggcatgtactccacgctcttcgtcctgatcacca 60310



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 527   aatgatggacagaggggaggcgaacatgaatatgagggacgc 568
             |||||||||||  ||||| || ||||||||||||||||||||
Sbjct: 60130 aatgatggacaagggggacgcaaacatgaatatgagggacgc 60089



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 290   tgctcatgtatgtgtgactagtaatgg 316
             ||||||||||||||||||||| |||||
Sbjct: 60631 tgctcatgtatgtgtgactagcaatgg 60605
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>dbj|AK063475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-B01, full
           insert sequence
          Length = 1211

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                       
Query: 489 ggcatgtactccacgctcttggtcctgatcaccaaattaatgatggacagaggggaggcg 548
           |||||||||||||||||||| ||| |||||||||   | |||||||| || |||||||||
Sbjct: 715 ggcatgtactccacgctcttcgtcttgatcaccagcctcatgatggagaggggggaggcg 656

                 
Query: 549 aacatg 554
            |||||
Sbjct: 655 tacatg 650
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>ref|XM_465955.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1562

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 486 aatggcatgtactccacgctcttggtcctgatcacca 522
           ||||||||| |||||||||||||||||| ||||||||
Sbjct: 703 aatggcatgaactccacgctcttggtccggatcacca 667
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                     
Query: 486      aatggcatgtactccacgctcttggtcctgatcacca 522
                ||||||||| |||||||||||||||||| ||||||||
Sbjct: 18555050 aatggcatgaactccacgctcttggtccggatcacca 18555086



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 489      ggcatgtactccacgctcttggtcctgatcacca 522
                |||||||||||||||||||| |||  ||||||||
Sbjct: 11593470 ggcatgtactccacgctcttagtctggatcacca 11593503
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>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1789_D08
          Length = 128673

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                  
Query: 486   aatggcatgtactccacgctcttggtcctgatcacca 522
             ||||||||| |||||||||||||||||| ||||||||
Sbjct: 96189 aatggcatgaactccacgctcttggtccggatcacca 96225
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>dbj|AK103266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124G19, full
           insert sequence
          Length = 1562

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 486 aatggcatgtactccacgctcttggtcctgatcacca 522
           ||||||||| |||||||||||||||||| ||||||||
Sbjct: 703 aatggcatgaactccacgctcttggtccggatcacca 667
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 489      ggcatgtactccacgctcttggtcctgatcac 520
                |||||| |||||||||||||||||||||||||
Sbjct: 12981269 ggcatgaactccacgctcttggtcctgatcac 12981300
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 489      ggcatgtactccacgctcttggtcctgatcac 520
                |||||| |||||||||||||||||||||||||
Sbjct: 12978044 ggcatgaactccacgctcttggtcctgatcac 12978075
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>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0006D11, complete sequence
          Length = 176637

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 489   ggcatgtactccacgctcttggtcctgatcac 520
             |||||| |||||||||||||||||||||||||
Sbjct: 58967 ggcatgaactccacgctcttggtcctgatcac 58998
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>dbj|AK109114.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-C05, full
           insert sequence
          Length = 1492

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 489 ggcatgtactccacgctcttggtcctgatcac 520
           |||||| |||||||||||||||||||||||||
Sbjct: 643 ggcatgaactccacgctcttggtcctgatcac 612
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>ref|NM_190168.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 822

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 ggcatgtactccacgctcttggtcctgatcaccaaattaatgatggacagaggggaggcg 548
           |||||| ||||||||||||| ||| |||||||||   | |||||||| ||||| ||||||
Sbjct: 488 ggcatgaactccacgctcttcgtcttgatcaccagcctcatgatggagagaggcgaggcg 429

                 
Query: 549 aacatg 554
            |||||
Sbjct: 428 tacatg 423
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>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0044P19, complete sequence
          Length = 176917

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 489   ggcatgtactccacgctcttggtcctgatcacca 522
             |||||||||||||||||||| ||| |||||||||
Sbjct: 42123 ggcatgtactccacgctcttcgtcttgatcacca 42090
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 489      ggcatgtactccacgctcttggtcctgatcacca 522
                |||||||||||||||||||| ||| |||||||||
Sbjct: 20728899 ggcatgtactccacgctcttcgtcttgatcacca 20728866



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 489      ggcatgtactccacgctctt 508
                ||||||||||||||||||||
Sbjct: 29093414 ggcatgtactccacgctctt 29093433
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>dbj|AK099531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031J21, full
           insert sequence
          Length = 1161

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 ggcatgtactccacgctcttggtcctgatcaccaaattaatgatggacagaggggaggcg 548
           |||||| ||||||||||||| ||| |||||||||   | |||||||| ||||| ||||||
Sbjct: 632 ggcatgaactccacgctcttcgtcttgatcaccagcctcatgatggagagaggcgaggcg 573

                 
Query: 549 aacatg 554
            |||||
Sbjct: 572 tacatg 567
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>dbj|AK067960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123F10, full
           insert sequence
          Length = 1208

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 ggcatgtactccacgctcttggtcctgatcaccaaattaatgatggacagaggggaggcg 548
           |||||| ||||||||||||| ||| |||||||||   | |||||||| ||||| ||||||
Sbjct: 640 ggcatgaactccacgctcttcgtcttgatcaccagcctcatgatggagagaggcgaggcg 581

                 
Query: 549 aacatg 554
            |||||
Sbjct: 580 tacatg 575
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>gb|AY105503.1| Zea mays PCO075069 mRNA sequence
          Length = 549

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 489 ggcatgtactccacgctcttggtcctgatcac 520
           ||||||||||| |||||||||||| |||||||
Sbjct: 307 ggcatgtactcaacgctcttggtcttgatcac 276
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 486     aatggcatgtactccacgctctt 508
               |||||||||||||||||||||||
Sbjct: 4375588 aatggcatgtactccacgctctt 4375566



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 486     aatggcatgtactccacgctctt 508
               |||||||||||||||||||||||
Sbjct: 4347523 aatggcatgtactccacgctctt 4347501



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 488     tggcatgtactccacgctctt 508
               |||||||||||||||||||||
Sbjct: 4082062 tggcatgtactccacgctctt 4082042



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 489     ggcatgtactccacgctctt 508
               ||||||||||||||||||||
Sbjct: 4051478 ggcatgtactccacgctctt 4051459
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>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1279D09
          Length = 134793

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 486   aatggcatgtactccacgctctt 508
             |||||||||||||||||||||||
Sbjct: 78406 aatggcatgtactccacgctctt 78384



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 486   aatggcatgtactccacgctctt 508
             |||||||||||||||||||||||
Sbjct: 50341 aatggcatgtactccacgctctt 50319
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>gb|AY110499.1| Zea mays CL35055_1 mRNA sequence
          Length = 760

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 101/127 (79%)
 Strand = Plus / Plus

                                                                       
Query: 290 tgctcatgtatgtgtgactagtaatggccgtctggcttcgtctctcgacccttttctgta 349
           ||||||||||||||||| |||||| ||| |  ||||||| || || || || ||||||  
Sbjct: 371 tgctcatgtatgtgtgattagtaagggcagcttggcttcctcgcttgatccctttctgat 430

                                                                       
Query: 350 gtacgcatataacaacagctgtacgacacctaagactgtgccaacgccattgggaacata 409
           ||| ||||| | || || |||||||| ||| || |  || |||| |||||| |||| |||
Sbjct: 431 gtaggcatacagcagcaactgtacgatacccaatatggttccaatgccatttggaatata 490

                  
Query: 410 tatgaag 416
           |||||||
Sbjct: 491 tatgaag 497



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                       
Query: 454 cactcatcagggacatcgatagggacaaataaaatggcatgtactccacgctcttggtcc 513
           ||||||||||  |||| ||||  ||||| || || |||||||| ||||||||||| ||||
Sbjct: 535 cactcatcagaaacatggataatgacaagtagaagggcatgtattccacgctcttcgtcc 594

                    
Query: 514 tgatcacca 522
            ||| ||||
Sbjct: 595 ggatgacca 603
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>ref|XM_465111.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1377

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 489 ggcatgtactccacgctcttggtcctgatcacca 522
           |||||||||||||||||||| |||  ||||||||
Sbjct: 707 ggcatgtactccacgctcttagtctggatcacca 674
to top
>ref|XM_507468.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10
           mRNA
          Length = 1383

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 489 ggcatgtactccacgctcttggtcctgatcacca 522
           |||||||||||||||||||| |||  ||||||||
Sbjct: 707 ggcatgtactccacgctcttagtctggatcacca 674
to top
>ref|XM_507467.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10
           mRNA
          Length = 1384

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 489 ggcatgtactccacgctcttggtcctgatcacca 522
           |||||||||||||||||||| |||  ||||||||
Sbjct: 708 ggcatgtactccacgctcttagtctggatcacca 675
to top
>ref|XM_506777.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10
           mRNA
          Length = 1485

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 489 ggcatgtactccacgctcttggtcctgatcacca 522
           |||||||||||||||||||| |||  ||||||||
Sbjct: 704 ggcatgtactccacgctcttagtctggatcacca 671
to top
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0018C10
          Length = 200183

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 489    ggcatgtactccacgctcttggtcctgatcacca 522
              |||||| ||||||||||||| ||| |||||||||
Sbjct: 168972 ggcatgaactccacgctcttcgtcttgatcacca 168939
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>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1065E10
          Length = 183580

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 489   ggcatgtactccacgctcttggtcctgatcacca 522
             |||||| ||||||||||||| ||| |||||||||
Sbjct: 10563 ggcatgaactccacgctcttcgtcttgatcacca 10530
to top
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0010K08
          Length = 184760

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 489   ggcatgtactccacgctcttggtcctgatcacca 522
             |||||||||||||||||||| |||  ||||||||
Sbjct: 39759 ggcatgtactccacgctcttagtctggatcacca 39792
to top
>dbj|AK104467.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C10, full
           insert sequence
          Length = 1383

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 489 ggcatgtactccacgctcttggtcctgatcacca 522
           |||||||||||||||||||| |||  ||||||||
Sbjct: 707 ggcatgtactccacgctcttagtctggatcacca 674
to top
>dbj|AK104411.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G12, full
           insert sequence
          Length = 1377

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 489 ggcatgtactccacgctcttggtcctgatcacca 522
           |||||||||||||||||||| |||  ||||||||
Sbjct: 707 ggcatgtactccacgctcttagtctggatcacca 674
to top
>dbj|AK100174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A16, full
           insert sequence
          Length = 1484

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 489 ggcatgtactccacgctcttggtcctgatcacca 522
           |||||||||||||||||||| |||  ||||||||
Sbjct: 703 ggcatgtactccacgctcttagtctggatcacca 670
to top
>dbj|AK071676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108F17, full
           insert sequence
          Length = 1384

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 489 ggcatgtactccacgctcttggtcctgatcacca 522
           |||||||||||||||||||| |||  ||||||||
Sbjct: 708 ggcatgtactccacgctcttagtctggatcacca 675
to top
>gb|AY106071.1| Zea mays PCO141993 mRNA sequence
          Length = 1300

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 489 ggcatgtactccacgctcttggtcctgatcacca 522
           |||||| ||||||||||||| ||| |||||||||
Sbjct: 732 ggcatgaactccacgctcttcgtcttgatcacca 699
to top
>ref|XM_483522.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1500

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 489 ggcatgtactccacgctcttggtcctgatcacc 521
           |||||| |||| |||||||||||| ||||||||
Sbjct: 677 ggcatgaactcgacgctcttggtcttgatcacc 645
to top
>ref|XM_507308.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702C09.33 mRNA
          Length = 1517

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 489 ggcatgtactccacgctcttggtcctgatcacc 521
           |||||| |||| |||||||||||| ||||||||
Sbjct: 678 ggcatgaactcgacgctcttggtcttgatcacc 646
to top
>gb|BT018599.1| Zea mays clone EL01N0449A02.d mRNA sequence
          Length = 1762

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 489 ggcatgtactccacgctcttggtcc 513
           |||||| ||||||||||||||||||
Sbjct: 746 ggcatgaactccacgctcttggtcc 722
to top
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 262     aagaatcatccatcttgttta 282
               |||||||||||||||||||||
Sbjct: 2279431 aagaatcatccatcttgttta 2279411
to top
>gb|AC164627.4| Mus musculus 10 BAC RP23-382A18 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 192275

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 274   tcttgtttatcttgcctgctc 294
             |||||||||||||||||||||
Sbjct: 39216 tcttgtttatcttgcctgctc 39196
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 262     aagaatcatccatcttgttta 282
               |||||||||||||||||||||
Sbjct: 2088514 aagaatcatccatcttgttta 2088534
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 489      ggcatgtactccacgctcttggtcctgatcacc 521
                |||||| |||| |||||||||||| ||||||||
Sbjct: 26719641 ggcatgaactcgacgctcttggtcttgatcacc 26719673
to top
>dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0066C12
          Length = 168874

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 488   tggcatgtactccacgctctt 508
             |||||||||||||||||||||
Sbjct: 65543 tggcatgtactccacgctctt 65523



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   ggcatgtactccacgctctt 508
             ||||||||||||||||||||
Sbjct: 34959 ggcatgtactccacgctctt 34940
to top
>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0702C09
          Length = 138203

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 489    ggcatgtactccacgctcttggtcctgatcacc 521
              |||||| |||| |||||||||||| ||||||||
Sbjct: 131168 ggcatgaactcgacgctcttggtcttgatcacc 131200
to top
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0033D24
          Length = 186132

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 489   ggcatgtactccacgctcttggtcctgatcacc 521
             |||||| |||| |||||||||||| ||||||||
Sbjct: 62983 ggcatgaactcgacgctcttggtcttgatcacc 63015
to top
>dbj|AK106127.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F06, full
           insert sequence
          Length = 1500

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 489 ggcatgtactccacgctcttggtcctgatcacc 521
           |||||| |||| |||||||||||| ||||||||
Sbjct: 677 ggcatgaactcgacgctcttggtcttgatcacc 645
to top
>dbj|AK070510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056B21, full
           insert sequence
          Length = 1517

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 489 ggcatgtactccacgctcttggtcctgatcacc 521
           |||||| |||| |||||||||||| ||||||||
Sbjct: 678 ggcatgaactcgacgctcttggtcttgatcacc 646
to top
>emb|Z37093.2|CEZK669 Caenorhabditis elegans Cosmid ZK669, complete sequence
          Length = 32370

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    acatagcttcaaataaacaaa 111
             |||||||||||||||||||||
Sbjct: 15373 acatagcttcaaataaacaaa 15393
to top
>gb|AC164629.14| Mus musculus 10 BAC RP23-16N3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 221874

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 274   tcttgtttatcttgcctgctc 294
             |||||||||||||||||||||
Sbjct: 59969 tcttgtttatcttgcctgctc 59989
to top
>ref|NM_113718.2| Arabidopsis thaliana unknown protein AT3G28007 mRNA, complete cds
          Length = 986

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 486 aatggcatgtactccacgctcttggtcctgatcacc 521
           ||||||||||||| ||| || |||||| ||||||||
Sbjct: 586 aatggcatgtacttcacacttttggtcttgatcacc 551
to top
>ref|XM_475994.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 714

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 489 ggcatgtactccacgctctt 508
           ||||||||||||||||||||
Sbjct: 500 ggcatgtactccacgctctt 481
to top
>ref|NM_192689.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 780

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 489 ggcatgtactccacgctctt 508
           ||||||||||||||||||||
Sbjct: 497 ggcatgtactccacgctctt 478
to top
>gb|AC150574.2| Bos taurus  BAC CH240-237H4 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 142758

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   agctttttacataagcaaaa 187
             ||||||||||||||||||||
Sbjct: 37242 agctttttacataagcaaaa 37261
to top
>ref|XM_956449.1| Neurospora crassa OR74A hypothetical protein (NCU01176.1) partial
            mRNA
          Length = 3747

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  ttgggaacatatatgaagaa 418
            ||||||||||||||||||||
Sbjct: 2984 ttgggaacatatatgaagaa 3003
to top
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05,
              complete sequence
          Length = 108479

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 489    ggcatgtactccacgctctt 508
              ||||||||||||||||||||
Sbjct: 103469 ggcatgtactccacgctctt 103488
to top
>ref|XM_326668.1| Neurospora crassa OR74A hypothetical protein (NCU01176.1) partial
            mRNA
          Length = 3747

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  ttgggaacatatatgaagaa 418
            ||||||||||||||||||||
Sbjct: 2984 ttgggaacatatatgaagaa 3003
to top
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04,
             complete sequence
          Length = 100800

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   ggcatgtactccacgctctt 508
             ||||||||||||||||||||
Sbjct: 19638 ggcatgtactccacgctctt 19657
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>gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete sequence
          Length = 131049

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    atcacatacatgatacaaca 51
             ||||||||||||||||||||
Sbjct: 39523 atcacatacatgatacaaca 39542
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>gb|AY811319.1| Schistosoma japonicum SJCHGC04153 protein mRNA, partial cds
          Length = 745

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 aaaacaatatgaacaaatga 143
           ||||||||||||||||||||
Sbjct: 664 aaaacaatatgaacaaatga 683
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>ref|XM_549052.2| PREDICTED: Canis familiaris similar to StAR-related lipid transfer
           protein 8 (StARD8) (START domain-containing protein 8)
           (LOC491932), mRNA
          Length = 3258

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 227 taggcttacagcgatggctg 246
           ||||||||||||||||||||
Sbjct: 429 taggcttacagcgatggctg 410
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>ref|XM_948078.1| Theileria annulata strain Ankara elongation factor subunit
           (TA08815) partial mRNA
          Length = 1620

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 gaatcatccatcttgtttat 283
           ||||||||||||||||||||
Sbjct: 758 gaatcatccatcttgtttat 739
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>gb|AY596246.1| Helicobacter sp. 'Flexispira taxon 10' 23S ribosomal RNA gene,
           partial sequence
          Length = 2970

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 gccccgtatgcgaaaaatga 451
           ||||||||||||||||||||
Sbjct: 563 gccccgtatgcgaaaaatga 582
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>gb|AC156574.2| Mus musculus BAC clone RP23-54L14 from chromosome 14, complete sequence
          Length = 208155

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   tttttacataagcaaaataa 190
             ||||||||||||||||||||
Sbjct: 78616 tttttacataagcaaaataa 78597
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>emb|AL670010.1|NCB10H4 Neurospora crassa DNA linkage group V BAC contig B10H4
          Length = 90763

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   ttgggaacatatatgaagaa 418
             ||||||||||||||||||||
Sbjct: 89177 ttgggaacatatatgaagaa 89196
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>emb|AL670009.1|NC123A4 Neurospora crassa DNA linkage group V cosmid contig 123A4
          Length = 153794

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  ttgggaacatatatgaagaa 418
            ||||||||||||||||||||
Sbjct: 9178 ttgggaacatatatgaagaa 9197
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>gb|AF428275.1|AF428275 Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 984

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 486 aatggcatgtactccacgctcttggtcctgatcacc 521
           ||||||||||||| ||| || |||||| ||||||||
Sbjct: 583 aatggcatgtacttcacacttttggtcttgatcacc 548
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>gb|AF339161.1|AF339161 Tupaia glis mannose-6-phosphate/insulin-like growth factor II
           receptor (m6p/igf2r) mRNA, partial cds
          Length = 7274

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 203 caaccctgagctgcaggcag 222
           ||||||||||||||||||||
Sbjct: 173 caaccctgagctgcaggcag 192
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 489     ggcatgtactccacgctctt 508
               ||||||||||||||||||||
Sbjct: 3976648 ggcatgtactccacgctctt 3976629
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>emb|BX822431.1|CNS0A77F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB37ZH08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 946

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 486 aatggcatgtactccacgctcttggtcctgatcacc 521
           ||||||||||||| ||| || |||||| ||||||||
Sbjct: 548 aatggcatgtacttcacacttttggtcttgatcacc 513
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>gb|AC108057.3| Homo sapiens BAC clone RP11-374N13 from 2, complete sequence
          Length = 127242

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 471   gatagggacaaataaaatgg 490
             ||||||||||||||||||||
Sbjct: 39316 gatagggacaaataaaatgg 39297
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>gb|AY086230.1| Arabidopsis thaliana clone 22745 mRNA, complete sequence
          Length = 937

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 486 aatggcatgtactccacgctcttggtcctgatcacc 521
           ||||||||||||| ||| || |||||| ||||||||
Sbjct: 587 aatggcatgtacttcacacttttggtcttgatcacc 552
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>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0704D04
          Length = 147638

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   ggcatgtactccacgctctt 508
             ||||||||||||||||||||
Sbjct: 22478 ggcatgtactccacgctctt 22459
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>dbj|AK118293.1| Arabidopsis thaliana At3g28007 mRNA for unknown protein, complete
           cds, clone: RAFL19-58-G08
          Length = 471

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 486 aatggcatgtactccacgctcttggtcctgatcacc 521
           ||||||||||||| ||| || |||||| ||||||||
Sbjct: 86  aatggcatgtacttcacacttttggtcttgatcacc 51
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>dbj|AB028616.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMG15
          Length = 86139

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 486  aatggcatgtactccacgctcttggtcctgatcacc 521
            ||||||||||||| ||| || |||||| ||||||||
Sbjct: 9225 aatggcatgtacttcacacttttggtcttgatcacc 9260
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>gb|BT002215.1| Arabidopsis thaliana At3g28008/At3g28008 mRNA, complete cds
          Length = 756

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 486 aatggcatgtactccacgctcttggtcctgatcacc 521
           ||||||||||||| ||| || |||||| ||||||||
Sbjct: 500 aatggcatgtacttcacacttttggtcttgatcacc 465
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>dbj|AK069614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023E05, full
           insert sequence
          Length = 1363

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 489 ggcatgtactccacgctctt 508
           ||||||||||||||||||||
Sbjct: 836 ggcatgtactccacgctctt 817
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>gb|AY110564.1| Zea mays CL2950_2 mRNA sequence
          Length = 602

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 489 ggcatgtactccacgctctt 508
           ||||||||||||||||||||
Sbjct: 540 ggcatgtactccacgctctt 559
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 489     ggcatgtactccacgctctt 508
               ||||||||||||||||||||
Sbjct: 3976624 ggcatgtactccacgctctt 3976605
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>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132682

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   ggcatgtactccacgctctt 508
             ||||||||||||||||||||
Sbjct: 13058 ggcatgtactccacgctctt 13039
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>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 152090

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    ggcatgtactccacgctctt 508
              ||||||||||||||||||||
Sbjct: 138624 ggcatgtactccacgctctt 138605
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>gb|AC147447.3| Gallus gallus BAC clone CH261-9P3 from chromosome unknown, complete
              sequence
          Length = 162933

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     cttcaaataaacaaatggct 116
              ||||||||||||||||||||
Sbjct: 100793 cttcaaataaacaaatggct 100812
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>emb|CT025564.10| Mouse DNA sequence from clone RP24-123J6 on chromosome 14, complete
             sequence
          Length = 165380

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   tttttacataagcaaaataa 190
             ||||||||||||||||||||
Sbjct: 68341 tttttacataagcaaaataa 68322
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>emb|AL928726.5| Mouse DNA sequence from clone RP23-397A11 on chromosome 2, complete
             sequence
          Length = 120515

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   gaaaaacaatatgaacaaat 141
             ||||||||||||||||||||
Sbjct: 99190 gaaaaacaatatgaacaaat 99209
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>emb|AL671478.9| Mouse DNA sequence from clone RP23-110A15 on chromosome X, complete
              sequence
          Length = 208695

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     cacatcagcaattcattaac 81
              ||||||||||||||||||||
Sbjct: 187194 cacatcagcaattcattaac 187175
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>emb|AL845172.3| Mouse DNA sequence from clone RP23-285J17 on chromosome 2, complete
              sequence
          Length = 185138

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    ctgagctgcaggcaggctgt 227
              ||||||||||||||||||||
Sbjct: 139041 ctgagctgcaggcaggctgt 139022
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>emb|AJ307488.1|MMU307488 Mus musculus partial 17.2.25-D-Jh4 gene for immunoglobulin heavy
           chain, sequence t414
          Length = 312

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 ctgagctgcaggcaggctgt 227
           ||||||||||||||||||||
Sbjct: 230 ctgagctgcaggcaggctgt 211


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,174,683
Number of Sequences: 3902068
Number of extensions: 5174683
Number of successful extensions: 96163
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95658
Number of HSP's gapped (non-prelim): 502
length of query: 572
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 549
effective length of database: 17,143,297,704
effective search space: 9411670439496
effective search space used: 9411670439496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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