>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28|
           kDa cold-induced protein)
          Length = 236

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 47/95 (49%), Positives = 58/95 (61%)
 Frame = -1

Query: 359 AAVRAISXMETLEGTFEXXXXXXXXXXXXXXXXXXXXXGSYLGWFVVIEKMIGVKLMDSA 180
           A  +A++ +ETLEG F                      G YLGWF  I+K+IG +L+D A
Sbjct: 132 AVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPA 191

Query: 179 RTPALAAWAEHFRMADAAKGVLPEDVDKVLEFLQT 75
           RTPALAAW E FR  DAAKGV+P+D DK+LEF QT
Sbjct: 192 RTPALAAWEERFRATDAAKGVVPDDADKLLEFRQT 226

>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)|
           (Protein bronze-2)
          Length = 236

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 19/44 (43%), Positives = 30/44 (68%)
 Frame = -1

Query: 215 EKMIGVKLMDSARTPALAAWAEHFRMADAAKGVLPEDVDKVLEF 84
           E++ G+ L+D++ TP L  W++ F    AAK VLP D +KV++F
Sbjct: 179 ERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLP-DTEKVVQF 221

>EGR1_BRARE (P26632) Early growth response protein 1 (EGR-1) (Krox24)|
          Length = 511

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 37  PPTALPHSPNQGNVCRNSSTLSTSSGKTPFAASAILKCSAH 159
           PP ++P S +Q     +SST S  S  +   +SA L CS H
Sbjct: 131 PPASIPSSTSQATHPSSSSTSSIPSSSSSSTSSASLSCSVH 171

>VP40_HCMVA (P16753) Capsid protein P40 [Contains: Assemblin (Protease) (EC|
           3.4.21.97); Capsid assembly protein; Gene UL80 protein;
           Gene UL80.5 protein; C-terminal peptide]
          Length = 708

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +1

Query: 40  PTALPHSPNQGNVCRNSSTLSTSSGKTPFAASAILKCSAHAARAGVLAESMSL 198
           P+A   SP    VC  +  L++  G+TP A  +     A  A+AGV+  S  L
Sbjct: 595 PSAASSSPTTTTVCTPTGELTSGGGETPTALLSGGAKVAERAQAGVVNASCRL 647

>SPEN_DROME (Q8SX83) Protein split ends|
          Length = 5560

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +1

Query: 85   NSSTLSTSSGKTPFAASAILKCSAHA 162
            NSSTLST S +TP ++  ++  SA A
Sbjct: 3162 NSSTLSTQSAETPVSSGTVISSSALA 3187

>RTN4R_MACFA (Q9N0E3) Reticulon-4 receptor precursor (Nogo receptor) (NgR)|
           (Nogo-66 receptor)
          Length = 473

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
 Frame = +3

Query: 135 RHPEMLSPRGQGRRPRGVHEXXXXXXXXXXEPPQVAAEHNVDEPDAV-AAEERLAPGAAL 311
           R P   SP G G  PR +++          EPP  A      EP     +  R  PG + 
Sbjct: 362 RVPPGDSPPGNGSGPRHINDSPFGTLPGSAEPPLTAVRPEGSEPPGFPTSGPRRRPGCSR 421

Query: 312 ERAFQRLHRRDGPHCRL 362
           +        R   HCRL
Sbjct: 422 K-------NRTRSHCRL 431

>RTN4R_HUMAN (Q9BZR6) Reticulon-4 receptor precursor (Nogo receptor) (NgR)|
           (Nogo-66 receptor)
          Length = 473

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
 Frame = +3

Query: 135 RHPEMLSPRGQGRRPRGVHEXXXXXXXXXXEPPQVAAEHNVDEPDAV-AAEERLAPGAAL 311
           R P   SP G G  PR +++          EPP  A      EP     +  R  PG + 
Sbjct: 362 RVPPGDSPPGNGSGPRHINDSPFGTLPGSAEPPLTAVRPEGSEPPGFPTSGPRRRPGCSR 421

Query: 312 ERAFQRLHRRDGPHCRL 362
           +        R   HCRL
Sbjct: 422 K-------NRTRSHCRL 431

>ZCH14_MOUSE (Q8VIG0) Zinc finger CCHC domain-containing protein 14 (BDG-29)|
          Length = 956

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 43  TALPHSPNQGNVCRNSSTLSTSS-GKTPFAASAIL 144
           +++P  P QG+ C NS+T S SS   T FA+ A L
Sbjct: 696 SSVPVGPLQGSFCANSNTASPSSHPSTSFASMASL 730

>RTN4R_MOUSE (Q99PI8) Reticulon-4 receptor precursor (Nogo receptor) (NgR)|
           (Nogo-66 receptor)
          Length = 473

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
 Frame = +3

Query: 135 RHPEMLSPRGQGRRPRGVHEXXXXXXXXXXEPPQVAAEHNVDEPDAV-AAEERLAPGAAL 311
           R P   +P G G  PR +++          EPP  A      EP  +     R  PG + 
Sbjct: 362 RVPPGDTPPGNGSGPRHINDSPFGTLPSSAEPPLTALRPGGSEPPGLPTTGPRRRPGCSR 421

Query: 312 ERAFQRLHRRDGPHCRL 362
           +        R   HCRL
Sbjct: 422 K-------NRTRSHCRL 431

>ENO_ANASP (Q8YRB0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)|
           (2-phospho-D-glycerate hydro-lyase)
          Length = 429

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/45 (42%), Positives = 24/45 (53%)
 Frame = +1

Query: 64  NQGNVCRNSSTLSTSSGKTPFAASAILKCSAHAARAGVLAESMSL 198
           NQ  + R    L  S  K+   A+AIL  S  AARAG  AES+ +
Sbjct: 91  NQELIDRTMIALDGSGNKSNLGANAILAVSLAAARAG--AESLGI 133

>LASP1_RABIT (O77506) LIM and SH3 domain protein 1 (LASP-1) (40 kDa|
           phosphoprotein) (pp40)
          Length = 263

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/68 (29%), Positives = 27/68 (39%)
 Frame = +3

Query: 114 QDTLRRIRHPEMLSPRGQGRRPRGVHEXXXXXXXXXXEPPQVAAEHNVDEPDAVAAEERL 293
           QD+    R PE   P      P+  H           +P QVA  +   EP A  + +R 
Sbjct: 147 QDSSNYRRPPEQQQP------PQPHHIPTSTPAYQQPQPQQVAQSYGYKEPAAPVSTQRG 200

Query: 294 APGAALER 317
           APG   +R
Sbjct: 201 APGGGGKR 208

>RTN4R_RAT (Q99M75) Reticulon-4 receptor precursor (Nogo receptor) (NgR)|
           (Nogo-66 receptor)
          Length = 473

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
 Frame = +3

Query: 135 RHPEMLSPRGQGRRPRGVHEXXXXXXXXXXEPPQVAAEHNVDEPDAV-AAEERLAPGAAL 311
           R P   +P G G  PR +++          EPP  A      EP  +     R  PG + 
Sbjct: 362 RVPPGDTPPGNGSGPRHINDSPFGTLPGSAEPPLTALRPGGSEPPGLPTTGPRRRPGCSR 421

Query: 312 ERAFQRLHRRDGPHCRL 362
           +        R   HCRL
Sbjct: 422 K-------NRTRSHCRL 431

>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1186

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 37  PPTALPH-SPNQGNVCRNSSTLSTSSGKTPFAASAILKCSAHA 162
           PP   P+ S +  +   +SS+ S+SS  +PF AS  L    H+
Sbjct: 368 PPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHS 410

>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1185

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 37  PPTALPH-SPNQGNVCRNSSTLSTSSGKTPFAASAILKCSAHA 162
           PP   P+ S +  +   +SS+ S+SS  +PF AS  L    H+
Sbjct: 369 PPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHS 411

>AMPH_RAT (O08838) Amphiphysin|
          Length = 683

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/55 (29%), Positives = 22/55 (40%)
 Frame = +3

Query: 156 PRGQGRRPRGVHEXXXXXXXXXXEPPQVAAEHNVDEPDAVAAEERLAPGAALERA 320
           P G+G  P G             E PQ A      E +A A +E++ P   +E A
Sbjct: 490 PAGEGESPEGAKIDVESTELASSESPQAA------ELEAGAPQEKVIPSVVIEPA 538

>ENO_MASBA (Q9U615) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)|
           (2-phospho-D-glycerate hydro-lyase)
          Length = 439

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = +1

Query: 67  QGNVCRNSSTLSTSSGKTPFAASAILKCSAHAARAGVLAESMSLTPIIFSITTN 228
           QG + R    +  +  KT   A+AIL CS    RA      + L   I  ++ N
Sbjct: 86  QGEIDRLMLQIDGTENKTHLGANAILGCSMSVCRAAAAFRGLPLYRYIAELSGN 139

>FLAB_CAMCO (P18245) Flagellin B (Flagellin N)|
          Length = 572

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +1

Query: 76  VCRNSSTLSTSSGKTPFAASAILKCSAHAARAGV--LAESMSLTPIIFSITTN 228
           V    S  S  SG + FAA  I   SAH   AGV  L  +M++  I  +  TN
Sbjct: 443 VVSTGSGFSAGSGNSQFAALRISTVSAHDETAGVTTLKGAMAVMDIAETAITN 495

>FLAA_CAMCO (P27053) Flagellin A|
          Length = 572

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +1

Query: 76  VCRNSSTLSTSSGKTPFAASAILKCSAHAARAGV--LAESMSLTPIIFSITTN 228
           V    S  S  SG + FAA  I   SAH   AGV  L  +M++  I  +  TN
Sbjct: 443 VVSTGSGFSAGSGNSQFAALRISTVSAHDETAGVTTLKGAMAVMDIAETAITN 495

>YP141_YEAST (Q03002) Putative serine/threonine-protein kinase YPL141C (EC|
           2.7.11.1)
          Length = 865

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 228 PPQVAAEHNVDEPDAVAAEERLAP 299
           PPQ +  H +  P ++A+++RL+P
Sbjct: 381 PPQESQNHIITRPASIASDQRLSP 404

>GSTX6_SOYBN (P32110) Probable glutathione S-transferase (EC 2.5.1.18) (Heat|
           shock protein 26A) (G2-4)
          Length = 225

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -1

Query: 230 WFVVIEKMIGVKLMDSARTPALAAWAEHFRMADAAKGVLP 111
           W  + +++ G++L  S + P L  W++ F        VLP
Sbjct: 166 WIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLP 205


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,328,631
Number of Sequences: 219361
Number of extensions: 617558
Number of successful extensions: 2336
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2326
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)