>ref|XM_463246.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2055

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/157 (84%)
 Strand = Plus / Minus

                                                                        
Query: 348  gcttgatatgatcaagggtacctctcaagccatagcgttcaactgctcgaatgccagctc 407
            |||| ||||||||||| ||   ||||||||||||||||||||| ||   ||||||| |||
Sbjct: 1833 gcttcatatgatcaagagtttttctcaagccatagcgttcaacggccttaatgccatctc 1774

                                                                        
Query: 408  ggaacccatctccatatattgcagaggggtctgtttcgatctggtgcttgaagaattctc 467
            | || |||||||||||||   |||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 1773 gaaaaccatctccatatacatcagaagggtctgtttcaatctggtgcttgaagaactctc 1714

                                                 
Query: 468  caagtcttttctcaaagtcagtcttttcacccttttt 504
            ||||| | ||||| ||||| |||| | ||||||||||
Sbjct: 1713 caagtttcttctcgaagtccgtctgtacacccttttt 1677

>gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0002I03
              map E1419S, complete sequence
          Length = 150945

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/157 (84%)
 Strand = Plus / Minus

                                                                          
Query: 348    gcttgatatgatcaagggtacctctcaagccatagcgttcaactgctcgaatgccagctc 407
              |||| ||||||||||| ||   ||||||||||||||||||||| ||   ||||||| |||
Sbjct: 117164 gcttcatatgatcaagagtttttctcaagccatagcgttcaacggccttaatgccatctc 117105

                                                                          
Query: 408    ggaacccatctccatatattgcagaggggtctgtttcgatctggtgcttgaagaattctc 467
              | || |||||||||||||   |||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 117104 gaaaaccatctccatatacatcagaagggtctgtttcaatctggtgcttgaagaactctc 117045

                                                   
Query: 468    caagtcttttctcaaagtcagtcttttcacccttttt 504
              ||||| | ||||| ||||| |||| | ||||||||||
Sbjct: 117044 caagtttcttctcgaagtccgtctgtacacccttttt 117008

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/157 (84%)
 Strand = Plus / Minus

                                                                            
Query: 348      gcttgatatgatcaagggtacctctcaagccatagcgttcaactgctcgaatgccagctc 407
                |||| ||||||||||| ||   ||||||||||||||||||||| ||   ||||||| |||
Sbjct: 23669081 gcttcatatgatcaagagtttttctcaagccatagcgttcaacggccttaatgccatctc 23669022

                                                                            
Query: 408      ggaacccatctccatatattgcagaggggtctgtttcgatctggtgcttgaagaattctc 467
                | || |||||||||||||   |||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 23669021 gaaaaccatctccatatacatcagaagggtctgtttcaatctggtgcttgaagaactctc 23668962

                                                     
Query: 468      caagtcttttctcaaagtcagtcttttcacccttttt 504
                ||||| | ||||| ||||| |||| | ||||||||||
Sbjct: 23668961 caagtttcttctcgaagtccgtctgtacacccttttt 23668925

>gb|AC092390.3| Oryza sativa chromosome 3 BAC OSJNBb0013K08 genomic sequence,
            complete sequence
          Length = 120116

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/157 (84%)
 Strand = Plus / Minus

                                                                        
Query: 348  gcttgatatgatcaagggtacctctcaagccatagcgttcaactgctcgaatgccagctc 407
            |||| ||||||||||| ||   ||||||||||||||||||||| ||   ||||||| |||
Sbjct: 1135 gcttcatatgatcaagagtttttctcaagccatagcgttcaacggccttaatgccatctc 1076

                                                                        
Query: 408  ggaacccatctccatatattgcagaggggtctgtttcgatctggtgcttgaagaattctc 467
            | || |||||||||||||   |||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 1075 gaaaaccatctccatatacatcagaagggtctgtttcaatctggtgcttgaagaactctc 1016

                                                 
Query: 468  caagtcttttctcaaagtcagtcttttcacccttttt 504
            ||||| | ||||| ||||| |||| | ||||||||||
Sbjct: 1015 caagtttcttctcgaagtccgtctgtacacccttttt 979

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/157 (84%)
 Strand = Plus / Minus

                                                                            
Query: 348      gcttgatatgatcaagggtacctctcaagccatagcgttcaactgctcgaatgccagctc 407
                |||| ||||||||||| ||   ||||||||||||||||||||| ||   ||||||| |||
Sbjct: 23662109 gcttcatatgatcaagagtttttctcaagccatagcgttcaacggccttaatgccatctc 23662050

                                                                            
Query: 408      ggaacccatctccatatattgcagaggggtctgtttcgatctggtgcttgaagaattctc 467
                | || |||||||||||||   |||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 23662049 gaaaaccatctccatatacatcagaagggtctgtttcaatctggtgcttgaagaactctc 23661990

                                                     
Query: 468      caagtcttttctcaaagtcagtcttttcacccttttt 504
                ||||| | ||||| ||||| |||| | ||||||||||
Sbjct: 23661989 caagtttcttctcgaagtccgtctgtacacccttttt 23661953

>dbj|AK066665.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073O11, full
            insert sequence
          Length = 2102

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/157 (84%)
 Strand = Plus / Minus

                                                                        
Query: 348  gcttgatatgatcaagggtacctctcaagccatagcgttcaactgctcgaatgccagctc 407
            |||| ||||||||||| ||   ||||||||||||||||||||| ||   ||||||| |||
Sbjct: 1702 gcttcatatgatcaagagtttttctcaagccatagcgttcaacggccttaatgccatctc 1643

                                                                        
Query: 408  ggaacccatctccatatattgcagaggggtctgtttcgatctggtgcttgaagaattctc 467
            | || |||||||||||||   |||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 1642 gaaaaccatctccatatacatcagaagggtctgtttcaatctggtgcttgaagaactctc 1583

                                                 
Query: 468  caagtcttttctcaaagtcagtcttttcacccttttt 504
            ||||| | ||||| ||||| |||| | ||||||||||
Sbjct: 1582 caagtttcttctcgaagtccgtctgtacacccttttt 1546

>gb|BT016955.1| Zea mays clone E04912705F06.c mRNA sequence
          Length = 974

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 353 atatgatcaagggtacctctcaagccatagcgttcaac 390
           |||||||||||||| | | ||||||||||||| |||||
Sbjct: 324 atatgatcaagggttcttttcaagccatagcgctcaac 361



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 440 gtttcgatctggtgcttgaagaat 463
           ||||||||||||||||||| ||||
Sbjct: 411 gtttcgatctggtgcttgatgaat 434

>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02,
              complete sequence
          Length = 138677

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 45     tattttactacatgtttgctat 66
              ||||||||||||||||||||||
Sbjct: 123706 tattttactacatgtttgctat 123685

>gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0409G01,
             complete sequence
          Length = 143263

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 45    tattttactacatgtttgctat 66
             ||||||||||||||||||||||
Sbjct: 65624 tattttactacatgtttgctat 65603

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 45       tattttactacatgtttgctat 66
                ||||||||||||||||||||||
Sbjct: 13694565 tattttactacatgtttgctat 13694544

>gb|AY109151.1| Zea mays PCO156068 mRNA sequence
          Length = 1078

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 353 atatgatcaagggtacctctcaagccatagcgttcaac 390
           |||||||||||||| | | ||||||||||||| |||||
Sbjct: 775 atatgatcaagggttcttttcaagccatagcgctcaac 738



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 440 gtttcgatctggtgcttgaagaat 463
           ||||||||||||||||||| ||||
Sbjct: 688 gtttcgatctggtgcttgatgaat 665

>gb|AC150561.4| Bos taurus  BAC CH240-184G17 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 227834

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    accttggcaaatttcatatct 88
             |||||||||||||||||||||
Sbjct: 31248 accttggcaaatttcatatct 31268

>ref|XM_531929.2| PREDICTED: Canis familiaris similar to 26S proteasome non-ATPase
           regulatory subunit 5 (26S proteasome subunit S5B) (26S
           protease subunit S5 basic) (LOC474703), mRNA
          Length = 1833

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 146 ttttctagcttctatttgcca 166
           |||||||||||||||||||||
Sbjct: 850 ttttctagcttctatttgcca 870

>ref|XM_848260.1| PREDICTED: Canis familiaris similar to 26S proteasome non-ATPase
           regulatory subunit 5 (26S proteasome subunit S5B) (26S
           protease subunit S5 basic) (LOC610717), mRNA
          Length = 1530

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 146 ttttctagcttctatttgcca 166
           |||||||||||||||||||||
Sbjct: 808 ttttctagcttctatttgcca 828

>gb|AC122457.4| Mus musculus BAC clone RP24-266P11 from chromosome 12, complete
             sequence
          Length = 159954

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   tcttttcaccctttttcgtc 508
             ||||||||||||||||||||
Sbjct: 20312 tcttttcaccctttttcgtc 20293

>emb|CR711627.2|CNS0GC1J Tetraodon nigroviridis full-length cDNA
          Length = 500

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 cccgtgctcacaaaccattt 247
           ||||||||||||||||||||
Sbjct: 334 cccgtgctcacaaaccattt 353

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 488     gtcttttcaccctttttcgt 507
               ||||||||||||||||||||
Sbjct: 4173045 gtcttttcaccctttttcgt 4173064

>gb|AC099787.2| Homo sapiens chromosome 1 clone RP4-538N4, complete sequence
          Length = 177329

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 461   aattctccaagtcttttctcaaag 484
             |||||||||||| |||||||||||
Sbjct: 81854 aattctccaagtattttctcaaag 81831

>dbj|AB236415.1| Takifugu rubripes TLE3 mRNA for transducin-like enhancer protein 3,
            complete cds
          Length = 2349

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 228  cccgtgctcacaaaccattt 247
            ||||||||||||||||||||
Sbjct: 2150 cccgtgctcacaaaccattt 2131

>gb|AC145591.5| Mus musculus BAC clone RP24-176N2 from chromosome 18, complete sequence
          Length = 167532

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   taactttgaaccaaaaagcc 275
             ||||||||||||||||||||
Sbjct: 20029 taactttgaaccaaaaagcc 20010



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   taactttgaaccaaaaagcc 213
             ||||||||||||||||||||
Sbjct: 20029 taactttgaaccaaaaagcc 20010

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 279      ataggatataccccctgctcacaa 302
                |||||||||| |||||||||||||
Sbjct: 25344767 ataggatataacccctgctcacaa 25344790

>dbj|AP003681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1158C05
          Length = 145514

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 279    ataggatataccccctgctcacaa 302
              |||||||||| |||||||||||||
Sbjct: 141811 ataggatataacccctgctcacaa 141834

>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0663E10
          Length = 162297

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 279   ataggatataccccctgctcacaa 302
             |||||||||| |||||||||||||
Sbjct: 34767 ataggatataacccctgctcacaa 34790

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 488     gtcttttcaccctttttcgt 507
               ||||||||||||||||||||
Sbjct: 4266825 gtcttttcaccctttttcgt 4266844

>emb|AL157957.4|CNS01RGF Human chromosome 14 DNA sequence BAC R-969O13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 202212

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    ccagttaaatattttactac 55
             ||||||||||||||||||||
Sbjct: 53189 ccagttaaatattttactac 53170

>emb|AL929266.9| Zebrafish DNA sequence from clone CH211-67E16 in linkage group 9,
             complete sequence
          Length = 199104

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    taaatattttactacatgtttgct 64
             ||||||||||||||||||| ||||
Sbjct: 63981 taaatattttactacatgtatgct 64004

>ref|NM_001037860.1| Takifugu rubripes transducin-like enhancer of split 3 (tle3), mRNA
          Length = 2349

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 228  cccgtgctcacaaaccattt 247
            ||||||||||||||||||||
Sbjct: 2150 cccgtgctcacaaaccattt 2131

>emb|AL807375.14| Mouse DNA sequence from clone RP23-247H23 on chromosome X, complete
             sequence
          Length = 143779

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    ttttactacatgtttgctat 66
             ||||||||||||||||||||
Sbjct: 60980 ttttactacatgtttgctat 60999

>gb|AC173483.1| Mus musculus BAC clone RP23-281C13 from chromosome 12, complete sequence
          Length = 182922

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    tcttttcaccctttttcgtc 508
              ||||||||||||||||||||
Sbjct: 105690 tcttttcaccctttttcgtc 105671

>gb|M18351.1|RATAFPGA Rat alpha-fetoprotein gene, promoter region and 5' end
          Length = 8370

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 293  ctgctcacaaaccgaacatgcaaa 316
            ||||||||||||||| ||||||||
Sbjct: 5100 ctgctcacaaaccgaccatgcaaa 5123

>gb|AC090503.12| Homo sapiens 12q BAC RP11-314D7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 221074

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     aaatattttactacatgttt 61
              ||||||||||||||||||||
Sbjct: 161806 aaatattttactacatgttt 161825


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,828,445
Number of Sequences: 3902068
Number of extensions: 4828445
Number of successful extensions: 82686
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82476
Number of HSP's gapped (non-prelim): 210
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)