ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags1c01 |
|---|---|
| Clone Library Name | barley_pub |
>PTD4_HUMAN (Q9NTK5) Putative GTP-binding protein PTD004| Length = 396 Score = 160 bits (406), Expect = 2e-39 Identities = 79/118 (66%), Positives = 91/118 (77%) Frame = -1 Query: 593 EAAKYCAEXQTISLIPKIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTD 414 E KY T S +PKIIK GFAA+ L YFFTAG EV+ W IR+ +KAPQAAG IHTD Sbjct: 278 ERQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGPDEVRAWTIRKGTKAPQAAGKIHTD 337 Query: 413 FERGFICAEVMKFEDLKELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK 240 FE+GFI AEVMK+ED KE GSE+AVKAAGKYRQ+G+ Y+V+DGDIIFFKFN KK Sbjct: 338 FEKGFIMAEVMKYEDFKEEGSENAVKAAGKYRQQGRNYIVEDGDIIFFKFNTPQQPKK 395
>PTD4_MOUSE (Q9CZ30) Putative GTP-binding protein PTD004 homolog| Length = 396 Score = 159 bits (403), Expect = 4e-39 Identities = 78/118 (66%), Positives = 91/118 (77%) Frame = -1 Query: 593 EAAKYCAEXQTISLIPKIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTD 414 E KY T S +PKIIK GFAA+ L YFFTAG EV+ W IR+ +KAPQAAG IHTD Sbjct: 278 ERQKYLEANMTQSALPKIIKAGFAALQLEYFFTAGPDEVRAWTIRKGTKAPQAAGKIHTD 337 Query: 413 FERGFICAEVMKFEDLKELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK 240 FE+GFI AEVMK+ED K+ GSE+AVKAAGKYRQ+G+ Y+V+DGDIIFFKFN KK Sbjct: 338 FEKGFIMAEVMKYEDFKDEGSENAVKAAGKYRQQGRNYIVEDGDIIFFKFNTPQQPKK 395
>YCHF_CAEEL (P91917) Putative GTP-binding protein W08E3.3| Length = 395 Score = 142 bits (358), Expect = 7e-34 Identities = 69/115 (60%), Positives = 82/115 (71%) Frame = -1 Query: 593 EAAKYCAEXQTISLIPKIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTD 414 E KY E S + KI+ TG+ A+ L YFFT+G EVK W I+ + AP+AAG IHTD Sbjct: 275 ERQKYLKEQGVTSNLDKIVHTGYKALQLEYFFTSGEDEVKAWTIQVGTPAPKAAGRIHTD 334 Query: 413 FERGFICAEVMKFEDLKELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGG 249 FE+GFI AEVMK DL ELG E+ KA GKYRQ+GKTY+VQDGD+IFFKFN G Sbjct: 335 FEKGFIMAEVMKVADLIELGDEAKCKAGGKYRQQGKTYIVQDGDVIFFKFNAGAG 389
>YBN5_YEAST (P38219) Putative GTP-binding protein YBR025C| Length = 394 Score = 116 bits (290), Expect = 6e-26 Identities = 63/117 (53%), Positives = 79/117 (67%) Frame = -1 Query: 593 EAAKYCAEXQTISLIPKIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTD 414 +A + + QTIS +PKII T + LI FFT G EV+ W IRR +KAPQAAG IH D Sbjct: 280 DAEEELKKLQTISALPKIITTMRQKLDLISFFTCGPDEVREWTIRRGTKAPQAAGVIHND 339 Query: 413 FERGFICAEVMKFEDLKELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGK 243 FI A+VMK ED+ E +SA+KAAGK Q+GK YVV+DGDII+F+ +G GK Sbjct: 340 LMNTFILAQVMKCEDVFEYKDDSAIKAAGKLMQKGKDYVVEDGDIIYFR---AGAGK 393
>ENGD_HAEIN (P44681) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 107 bits (266), Expect = 3e-23 Identities = 48/96 (50%), Positives = 69/96 (71%) Frame = -1 Query: 545 KIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDL 366 ++I+ G+A ++L +FTAG EV+ W + + AP+AA IHTDFE+GFI AEV+ +ED Sbjct: 267 RVIRAGYALLNLQTYFTAGVKEVRAWTVSVGATAPKAAAVIHTDFEKGFIRAEVIAYEDF 326 Query: 365 KELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNV 258 + E+ K AGK+R EGK Y+VQDGD++ F+FNV Sbjct: 327 IQFNGENGAKEAGKWRLEGKDYIVQDGDVMHFRFNV 362
>ENGD_BACSU (P37518) GTP-dependent nucleic acid-binding protein engD| Length = 366 Score = 106 bits (265), Expect = 4e-23 Identities = 50/98 (51%), Positives = 67/98 (68%) Frame = -1 Query: 551 IPKIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFE 372 + ++IK ++ + L +FTAG EV+ W ++ KAP+ AG IH+DFERGFI AE + +E Sbjct: 269 LDQLIKASYSLLGLATYFTAGEQEVRAWTFKKGMKAPECAGIIHSDFERGFIRAETVAYE 328 Query: 371 DLKELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNV 258 DL G + K AGK R EGK YVVQDGD+I F+FNV Sbjct: 329 DLLAGGGMAGAKEAGKVRLEGKEYVVQDGDVIHFRFNV 366
>ENGD_HAEDU (Q7VMI2) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 103 bits (256), Expect = 5e-22 Identities = 46/96 (47%), Positives = 68/96 (70%) Frame = -1 Query: 545 KIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDL 366 ++I+ G+ ++L +FTAG EV+ W + + AP+AA IHTDFE+GFI AEV+ ++D Sbjct: 267 RVIRAGYRLLNLQTYFTAGVKEVRAWTVAVGATAPKAAAVIHTDFEKGFIRAEVIAYDDF 326 Query: 365 KELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNV 258 + E+ K AGK+R EGK Y+VQDGD++ F+FNV Sbjct: 327 IQFKGENGAKEAGKWRLEGKDYIVQDGDVMHFRFNV 362
>ENGD_BUCAP (Q8K9V2) GTP-dependent nucleic acid-binding protein engD| Length = 361 Score = 102 bits (253), Expect = 1e-21 Identities = 52/95 (54%), Positives = 66/95 (69%) Frame = -1 Query: 542 IIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLK 363 IIK+G+ ++LI FFTAG EV+ W I S + QAA IH+DF RGFI A+++ + D Sbjct: 267 IIKSGYKILNLITFFTAGIKEVRAWAIPNGSTSLQAADKIHSDFRRGFIRAQIINYLDFI 326 Query: 362 ELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNV 258 + SE+ VK AGKYR EGK Y +QDGDII F FNV Sbjct: 327 KYKSETKVKEAGKYRSEGKFYQIQDGDIINFLFNV 361
>ENGD_PASMU (Q9CP90) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 101 bits (252), Expect = 1e-21 Identities = 46/96 (47%), Positives = 68/96 (70%) Frame = -1 Query: 545 KIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDL 366 ++I+ G+ ++L +FTAG EV+ W I + AP++A IHTDFE+GFI AEV+ ++D Sbjct: 267 RVIRAGYKLLNLQTYFTAGVKEVRAWTIPIGATAPKSAAVIHTDFEKGFIRAEVIAYDDF 326 Query: 365 KELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNV 258 + E+ K AGK+R EGK Y+VQDGD++ F+FNV Sbjct: 327 IQYKGEAGAKEAGKWRLEGKDYIVQDGDVMHFRFNV 362
>YEAD_SCHPO (O14078) Hypothetical GTP-binding protein UNK4.13c in chromosome I| Length = 407 Score = 101 bits (251), Expect = 2e-21 Identities = 50/109 (45%), Positives = 72/109 (66%) Frame = -1 Query: 593 EAAKYCAEXQTISLIPKIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTD 414 EAA+ CA S + +II G++A++LI++FTA V+ W I SKAP AAG IH+D Sbjct: 296 EAAQECASLGKNSQLSEIICAGYSALNLIHYFTASEKIVQAWTIADGSKAPDAAGIIHSD 355 Query: 413 FERGFICAEVMKFEDLKELGSESAVKAAGKYRQEGKTYVVQDGDIIFFK 267 F++ F+ EV+KF D ++ S A K+ GK + +GK Y V+ GDIIF+K Sbjct: 356 FKKKFVAGEVIKFSDFEKYKSVDACKSVGKCKTKGKDYTVEPGDIIFWK 404
>ENGD_SHIFL (P0ABU4) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 100 bits (248), Expect = 4e-21 Identities = 48/96 (50%), Positives = 64/96 (66%) Frame = -1 Query: 545 KIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDL 366 ++I+ G+ ++L +FTAG EV+ W I + APQAAG IHTDFE+GFI A+ + FED Sbjct: 267 RVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDF 326 Query: 365 KELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNV 258 E K AGK R EGK Y+V+DGD++ F FNV Sbjct: 327 ITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFLFNV 362
>ENGD_ECOLI (P0ABU2) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 100 bits (248), Expect = 4e-21 Identities = 48/96 (50%), Positives = 64/96 (66%) Frame = -1 Query: 545 KIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDL 366 ++I+ G+ ++L +FTAG EV+ W I + APQAAG IHTDFE+GFI A+ + FED Sbjct: 267 RVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDF 326 Query: 365 KELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNV 258 E K AGK R EGK Y+V+DGD++ F FNV Sbjct: 327 ITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFLFNV 362
>ENGD_ECO57 (P0ABU3) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 100 bits (248), Expect = 4e-21 Identities = 48/96 (50%), Positives = 64/96 (66%) Frame = -1 Query: 545 KIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDL 366 ++I+ G+ ++L +FTAG EV+ W I + APQAAG IHTDFE+GFI A+ + FED Sbjct: 267 RVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDF 326 Query: 365 KELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNV 258 E K AGK R EGK Y+V+DGD++ F FNV Sbjct: 327 ITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFLFNV 362
>ENGD_BUCAI (P57288) GTP-dependent nucleic acid-binding protein engD| Length = 361 Score = 94.7 bits (234), Expect = 2e-19 Identities = 45/95 (47%), Positives = 63/95 (66%) Frame = -1 Query: 542 IIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDLK 363 II +G+ ++LI FFT G E++ W I S + +AA IH+DF +GFI A+++K+ D Sbjct: 267 IISSGYHLLNLITFFTVGDKEIRAWAIPNGSTSIEAAHKIHSDFSKGFIRAQIIKYVDFI 326 Query: 362 ELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNV 258 SE+ +K GK+R EGK Y +QDGDII F FNV Sbjct: 327 TYKSEAKIKEMGKFRTEGKQYYIQDGDIIHFLFNV 361
>Y024_MYCGE (P47270) Probable GTP-binding protein MG024| Length = 367 Score = 88.2 bits (217), Expect = 2e-17 Identities = 41/97 (42%), Positives = 61/97 (62%) Frame = -1 Query: 545 KIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDL 366 ++I+ + ++L FFT G EV+ W ++ APQ AG IH+DFE+GFI EV+ ++ L Sbjct: 271 RVIQAAYQTLNLWSFFTFGKKEVRAWTFKKGWNAPQCAGQIHSDFEKGFIKVEVISWDQL 330 Query: 365 KELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVS 255 + S K G R EGK Y+++DGD+ FKFNV+ Sbjct: 331 FAMKSLQEAKKQGLIRLEGKNYLIKDGDVCNFKFNVT 367
>YLF2_YEAST (P38746) Putative GTP-binding protein YLF2| Length = 405 Score = 87.8 bits (216), Expect = 2e-17 Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 3/114 (2%) Frame = -1 Query: 575 AEXQTISLIPKIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFI 396 ++ Q +S IP+II ++LI FFT G EV W IR + A +AAG IH+D FI Sbjct: 292 SDQQLVSAIPQIILEMRKLLNLISFFTCGPQEVHQWNIREGTTAQEAAGVIHSDLRETFI 351 Query: 395 CAEVMKFEDLKELG---SESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGK 243 A+V+K++DLK++ +ES +K+ G ++ GK Y++QD DI FK + GGK Sbjct: 352 SADVIKYDDLKKMEPPLNESLLKSKGLIKRAGKQYIMQDNDIALFK---AAGGK 402
>ENGD_BUCBP (Q89AR6) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 80.5 bits (197), Expect = 3e-15 Identities = 42/99 (42%), Positives = 56/99 (56%) Frame = -1 Query: 554 LIPKIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKF 375 ++ +I GF A++LI FFTAG EV W Q+ IHTD +GFI A+V+ + Sbjct: 264 MLKNVIWAGFNALNLITFFTAGKKEVHAWTTTNNLFIFQSVKCIHTDLSKGFIRAQVISY 323 Query: 374 EDLKELGSESAVKAAGKYRQEGKTYVVQDGDIIFFKFNV 258 +D + E K GK R EGK YV+ DGDII +NV Sbjct: 324 DDFIKYKGEKRSKELGKIRIEGKRYVICDGDIIHVLYNV 362
>Y026_MYCPN (P75088) Probable GTP-binding protein MG024 homolog (B01_orf362)| Length = 362 Score = 70.9 bits (172), Expect = 3e-12 Identities = 38/80 (47%), Positives = 47/80 (58%) Frame = -1 Query: 545 KIIKTGFAAIHLIYFFTAGHGEVKCWQIRRQSKAPQAAGAIHTDFERGFICAEVMKFEDL 366 ++IKT + AI L FFT G EV+ W ++ APQ AG IHTDFERGFI EV+ + L Sbjct: 271 QLIKTAYDAIGLWSFFTFGKQEVRAWAFKKGWLAPQCAGEIHTDFERGFIKVEVISWNQL 330 Query: 365 KELGSESAVKAAGKYRQEGK 306 EL S K G R G+ Sbjct: 331 YELKSLQEAKKQGLVRLRGQ 350
>DHP2_CAEEL (Q18677) Dihydropyrimidinase 2 (EC 3.5.2.2) (CeCRMP/DHP-2) (UlipA)| Length = 520 Score = 32.0 bits (71), Expect = 1.4 Identities = 21/59 (35%), Positives = 28/59 (47%) Frame = -1 Query: 353 SESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK**IHHRVVYFSIFEFTQVLSV 177 S A K Y Q+G+ V D DI+ + N + K HH + F+IFE QV V Sbjct: 372 STMAAKIFNCYPQKGRIAVGSDADIVIWNANATRTISK-DTHHHAIDFNIFEGMQVHGV 429
>ADY4_YEAST (Q05955) Accumulates dyads protein 4| Length = 493 Score = 31.6 bits (70), Expect = 1.8 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 21/90 (23%) Frame = +3 Query: 357 QLF*IFKLHYLG----TYEASF---KISVNCTSSLRSFTLTSDLP--------------A 473 Q F + KL+Y+ T+EAS K+++ C + + D P A Sbjct: 340 QFFYVLKLYYMQDNEYTFEASSEMDKLTIECLCIIENIIDACDNPDEVTDYQLPKVLLTA 399 Query: 474 LHLAVTSSEEVYEMNCCKTSLDDFGDQTYR 563 + + +E++ E N C SLDD+ +TY+ Sbjct: 400 MEGKLLVAEKISEDNDCSESLDDYHPRTYQ 429
>KLOT_MOUSE (O35082) Klotho precursor (EC 3.2.1.31) [Contains: Klotho peptide]| Length = 1014 Score = 31.2 bits (69), Expect = 2.4 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 7/94 (7%) Frame = -1 Query: 548 PKIIKTGFAAIHLIYF------FTAGHGE-VKCWQIRRQSKAPQAAGAIHTDFERGFICA 390 P+++ +HL+ +A G+ + W ++ AP+AAG +H F GF+ A Sbjct: 11 PRLVLLRLLLLHLLLLALRARCLSAEPGQGAQTWARFARAPAPEAAGLLHDTFPDGFLWA 70 Query: 389 EVMKFEDLKELGSESAVKAAGKYRQEGKTYVVQD 288 +GS +A + G +RQ GK + D Sbjct: 71 ----------VGS-AAYQTEGGWRQHGKGASIWD 93
>DHP2_CAEBR (Q61YQ1) Dihydropyrimidinase 2 (EC 3.5.2.2)| Length = 518 Score = 31.2 bits (69), Expect = 2.4 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = -1 Query: 353 SESAVKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK**IHHRVVYFSIFEFTQVLSV- 177 S A K Y ++G+ V D DI+ + N + K HH + F+IFE QV V Sbjct: 372 STMAAKIFNCYPRKGRIAVGSDADIVVWNANATRTISK-DTHHHAIDFNIFEGMQVHGVP 430 Query: 176 LIADCAGRV 150 C GR+ Sbjct: 431 ETTICRGRI 439
>ZBED4_HUMAN (O75132) Zinc finger BED domain-containing protein 4| Length = 1171 Score = 30.8 bits (68), Expect = 3.1 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = -3 Query: 258 FWRWKEVMNSSQGRVF*HFRVHP-GTISTDCRLCGKGISTNWKGGI 124 F + K+VM + V+ HF + P ++ +CR CG IS KG + Sbjct: 447 FQQNKKVMKRLKSEVWHHFSLAPMDSLKAECRYCGCAISRGKKGDV 492
>ZN239_HUMAN (Q16600) Zinc finger protein 239 (Zinc finger protein MOK-2)| (HOK-2) Length = 458 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/44 (40%), Positives = 21/44 (47%) Frame = -3 Query: 264 QCFWRWKEVMNSSQGRVF*HFRVHPGTISTDCRLCGKGISTNWK 133 QC+ K SS R+ H RVH G C CGKG S + K Sbjct: 376 QCYECGKGFSQSSDLRI--HLRVHTGEKPYHCGKCGKGFSQSSK 417
>ZNF41_HUMAN (P51814) Zinc finger protein 41| Length = 821 Score = 30.8 bits (68), Expect = 3.1 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -3 Query: 216 VF*HFRVHPGTISTDCRLCGKGISTNWKGGIYKFSFT 106 +F H R+H G +C CGKG S N I++ + T Sbjct: 412 LFRHLRIHTGEKPYECSECGKGFSQNSDLSIHQKTHT 448
>ZN341_HUMAN (Q9BYN7) Zinc finger protein 341| Length = 854 Score = 30.4 bits (67), Expect = 4.0 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = -3 Query: 207 HFRVHPGTISTDCRLCGKGISTNWKGGIYKFSFTLL 100 H + H +S C LCGK + + G++++S +LL Sbjct: 493 HIKSHQEELSYRCHLCGKDFPSLYDLGVHQYSHSLL 528
>ZN285_HUMAN (Q96NJ3) Zinc finger protein 285| Length = 435 Score = 30.4 bits (67), Expect = 4.0 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 207 HFRVHPGTISTDCRLCGKGISTN 139 H RVH G C+ CGKG S N Sbjct: 375 HLRVHTGERPYKCKACGKGFSRN 397
>ZN225_HUMAN (Q9UK10) Zinc finger protein 225| Length = 706 Score = 30.0 bits (66), Expect = 5.3 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 207 HFRVHPGTISTDCRLCGKGISTN 139 H RVH G + C CGKG TN Sbjct: 390 HVRVHSGETTFKCEECGKGFYTN 412
>GLMM_LACPL (Q88YE8) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 451 Score = 30.0 bits (66), Expect = 5.3 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 16/71 (22%) Frame = -1 Query: 410 ERGFICAEVMKFEDLKELGSESAVKAAG---KYRQEGKTYVV-------------QDGDI 279 ERG + + + + LG A++AAG K Q G YVV Q G + Sbjct: 274 ERGKLKQDTVVTTVMSNLGLYKALEAAGLHSKQTQVGDRYVVEEMLKDGYNLGGEQSGHV 333 Query: 278 IFFKFNVSGGG 246 +F FN +G G Sbjct: 334 VFLDFNTTGDG 344
>ZN227_HUMAN (Q86WZ6) Zinc finger protein 227| Length = 799 Score = 30.0 bits (66), Expect = 5.3 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = -3 Query: 207 HFRVHPGTISTDCRLCGKGIS 145 HFRVH G C+ CGKG S Sbjct: 482 HFRVHTGEKPYKCKECGKGFS 502
>ZFP27_MOUSE (P10077) Zinc finger protein 27 (Zfp-27) (mKR4 protein)| Length = 819 Score = 30.0 bits (66), Expect = 5.3 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -3 Query: 216 VF*HFRVHPGTISTDCRLCGKGISTN 139 +F H R+H G DC CGKG S N Sbjct: 248 LFRHRRIHTGEKLYDCSHCGKGFSYN 273
>ZN155_HUMAN (Q12901) Zinc finger protein 155| Length = 538 Score = 29.6 bits (65), Expect = 6.9 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = -3 Query: 207 HFRVHPGTISTDCRLCGKGISTN 139 H RVH G S C CGKG TN Sbjct: 390 HQRVHSGEKSFKCEECGKGFYTN 412
>ZN620_PONPY (Q5RB33) Zinc finger protein 620| Length = 422 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 264 QCFWRWKEVMNSSQGRVF*HFRVHPGTISTDCRLCGKGISTN 139 +C WK SS V H R+H G +C+ CGK +S+N Sbjct: 309 ECNECWKTFSCSSSFTV--HQRMHTGEKPYECKECGKRLSSN 348
>ZN620_HUMAN (Q6ZNG0) Zinc finger protein 620| Length = 422 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 264 QCFWRWKEVMNSSQGRVF*HFRVHPGTISTDCRLCGKGISTN 139 +C WK SS V H R+H G +C+ CGK +S+N Sbjct: 309 ECNECWKTFSCSSSFTV--HQRMHTGEKPYECKECGKRLSSN 348
>ZN584_HUMAN (Q8IVC4) Zinc finger protein 584| Length = 421 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 207 HFRVHPGTISTDCRLCGKGISTNWKGGIYK 118 H RVH G +C+ CGKG T + G+Y+ Sbjct: 316 HQRVHTGERPFECKQCGKGYVT--RSGLYQ 343
>ZNF13_HUMAN (P17016) Zinc finger protein 13 (Zinc finger protein KOX5)| (Fragment) Length = 56 Score = 29.3 bits (64), Expect = 9.0 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = -3 Query: 207 HFRVHPGTISTDCRLCGKGIS 145 HFRVH G C CGKG S Sbjct: 19 HFRVHTGEKPYKCEECGKGFS 39
>ZN440_HUMAN (Q8IYI8) Zinc finger protein 440| Length = 595 Score = 29.3 bits (64), Expect = 9.0 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Frame = -3 Query: 342 CKGCWEVQAGRENIRGAGWRHHLLQV----QCFWRWKEVMN-SSQGRVF*HFRVHPGTIS 178 CK C + ++R G H + +C ++ V N S R H R+H G Sbjct: 398 CKQCGKAFRSASHLRVHGRTHTGEKPYECKECGKAFRYVNNLQSHERTQTHIRIHSGERR 457 Query: 177 TDCRLCGKG 151 C++CGKG Sbjct: 458 YKCKICGKG 466
>ZN559_HUMAN (Q9BR84) Zinc finger protein 559| Length = 538 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Frame = -3 Query: 342 CKGCWEVQAGRENIRGAGWRHHLLQ--VQCFWRWKEVMNSSQGRVF*HFRVHPGTISTDC 169 CK C + A ++ R H + QC K +NSS + H + HPG DC Sbjct: 355 CKECGKAFANSSHLT-VHMRTHTGEKPYQCKECGKAFINSSSFKS--HMQTHPGVKPYDC 411 Query: 168 RLCGK 154 + CGK Sbjct: 412 QQCGK 416
>ZN239_MOUSE (P24399) Zinc finger protein 239 (Zfp-239) (Zinc finger protein| MOK-2) Length = 201 Score = 29.3 bits (64), Expect = 9.0 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = -3 Query: 264 QCFWRWKEVMNSSQGRVF*HFRVHPGTISTDCRLCGKGISTNWK 133 QC+ K SS R+ H RVH G C CG+G S + K Sbjct: 119 QCYECGKGFSQSSDLRI--HLRVHTGEKPYHCGKCGQGFSQSSK 160
>ZNF45_HUMAN (Q02386) Zinc finger protein 45 (BRC1744)| Length = 682 Score = 29.3 bits (64), Expect = 9.0 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = -3 Query: 207 HFRVHPGTISTDCRLCGKGIS 145 HFRVH G C CGKG S Sbjct: 434 HFRVHTGEKPYKCEECGKGFS 454 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,994,691 Number of Sequences: 219361 Number of extensions: 1874066 Number of successful extensions: 8268 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 5350 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8247 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
