ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1b21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 303 3e-79
2gb|AC093180.12| Oryza sativa chromosome 3 BAC OJ1004_D04 genomic... 303 3e-79
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 303 3e-79
4dbj|AK102700.1| Oryza sativa (japonica cultivar-group) cDNA clon... 303 3e-79
5ref|NM_184650.1| Oryza sativa (japonica cultivar-group), mRNA 299 5e-78
6dbj|AK060827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 287 2e-74
7ref|NM_115311.2| Arabidopsis thaliana ATGCN4 AT3G54540 (ATGCN4) ... 100 9e-18
8gb|BT008795.1| Arabidopsis thaliana At3g54540 gene, complete cds 100 9e-18
9emb|AL138656.2|ATT14E10 Arabidopsis thaliana DNA chromosome 3, B... 100 9e-18
10gb|AY054525.1| Arabidopsis thaliana ABC transporter-like protein... 100 9e-18
11gb|AY084906.1| Arabidopsis thaliana clone 120919 mRNA, complete ... 100 9e-18
12emb|AJ583008.1| Populus tremula x Populus tremuloides partial mR... 86 1e-13
13gb|AC136504.23| Medicago truncatula clone mth2-13m6, complete se... 74 5e-10
14gb|AC116136.9| Mus musculus chromosome 5, clone RP23-116G17, com... 54 5e-04
15gb|BC003300.1| Mus musculus ATP-binding cassette, sub-family F (... 54 5e-04
16ref|NM_013853.1| Mus musculus ATP-binding cassette, sub-family F... 54 5e-04
17dbj|AK137233.1| Mus musculus adult male urinary bladder cDNA, RI... 54 5e-04
18dbj|AK147937.1| Mus musculus melanocyte cDNA, RIKEN full-length ... 54 5e-04
19dbj|AK151545.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 54 5e-04
20dbj|AK087990.1| Mus musculus 2 days neonate thymus thymic cells ... 54 5e-04
21gb|AF213382.1|AF213382 Mus musculus ATP-binding cassette protein... 54 5e-04
22gb|AC134763.4| Rattus norvegicus BAC CH230-221M14 (Children's H... 50 0.008
23ref|XM_575628.1| PREDICTED: Rattus norvegicus similar to ATP-bin... 50 0.008
24ref|XM_231307.3| PREDICTED: Rattus norvegicus ATP-binding casset... 50 0.008
25dbj|AK209085.1| Mus musculus cDNA, clone:Y2G0113O10, strand:plus... 48 0.030
26gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 44 0.47
27gb|AC113593.14| Mus musculus chromosome 15, clone RP23-363I24, c... 42 1.9
28dbj|AP003923.1| Mus musculus genomic DNA, chromosome 2, clone:B4... 42 1.9
29gb|DQ086211.1| Ictalurus punctatus ATP-binding cassette sub-fami... 42 1.9
30gb|AC132878.13| Mus musculus chromosome 15, clone RP24-223D21, c... 42 1.9
31dbj|AK040905.1| Mus musculus adult male aorta and vein cDNA, RIK... 42 1.9
32emb|AL929021.13| Mouse DNA sequence from clone RP23-89H14 on chr... 42 1.9
33dbj|AP005858.1| Mus musculus genomic DNA, chromosome 2 clone:B47... 42 1.9
34emb|AL672066.10| Mouse DNA sequence from clone RP23-311G7 on chr... 42 1.9
35gb|CP000149.1| Geobacter metallireducens GS-15 plasmid, complete... 40 7.4
36gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 7.4
37emb|CR847808.6| Zebrafish DNA sequence from clone CH211-151I8 in... 40 7.4
38gb|AC146141.2| Pan troglodytes BAC clone RP43-3A23 from 7, compl... 40 7.4
39gb|AC146200.2| Pan troglodytes BAC clone RP43-34F23 from 7, comp... 40 7.4
40emb|AL591395.2| Human DNA sequence from clone RP13-103J3 on chro... 40 7.4
41emb|AL359382.23| Human DNA sequence from clone RP11-631F7 on chr... 40 7.4
42emb|AL035604.16|HS38C16 Human DNA sequence from clone RP1-38C16 ... 40 7.4
43emb|CR378668.1| Photobacterium profundum SS9; segment 6/12 40 7.4
44emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, stra... 40 7.4
45emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BA... 40 7.4
46emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, ... 40 7.4
47emb|AL021633.2|ATF8F16 Arabidopsis thaliana DNA chromosome 4, BA... 40 7.4
48dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 40 7.4
49gb|AC006525.1| Homo sapiens chromosome 5 clone RP1-4O17, complet... 40 7.4
50gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, compl... 40 7.4
51gb|AC091615.3| Homo sapiens chromosome 1 clone RP5-840P12, compl... 40 7.4
52gb|AC092809.2| Homo sapiens chromosome 1 clone RP11-365O16, comp... 40 7.4
53gb|AC093545.1| Homo sapiens chromosome X clone RP5-1015P16A, com... 40 7.4
54gb|AC074350.5| Homo sapiens BAC clone RP11-742M10 from 2, comple... 40 7.4
55gb|AC155831.7| Mus musculus 10 BAC RP24-189B10 (Roswell Park Can... 40 7.4
56gb|AC153525.12| Mus musculus 10 BAC RP23-440I21 (Roswell Park Ca... 40 7.4
57gb|AC106783.3| Homo sapiens chromosome 16 clone RP11-347K10, com... 40 7.4
58gb|AC023108.4| Homo sapiens BAC clone RP11-121I13 from 2, comple... 40 7.4
59gb|AY167567.1| Geobacter metallireducens putative ferredoxin gen... 40 7.4
60gb|AC155920.3| Monodelphis domestica, clone XX-22D10, complete s... 40 7.4
61emb|BX321898.29| Zebrafish DNA sequence from clone DKEYP-34C12 i... 40 7.4
62gb|AC090015.6| Homo sapiens 12 BAC RP11-711C17 (Roswell Park Can... 40 7.4
63gb|AC007486.1|AC007486 Homo sapiens clone DJ1015P16A, complete s... 40 7.4
64emb|BX545855.16| Zebrafish DNA sequence from clone CH211-212N6 i... 40 7.4 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  303 bits (153), Expect = 3e-79
 Identities = 280/323 (86%)
 Strand = Plus / Plus

                                                                            
Query: 219      cattactcttcgacttccttctttatttctgccattagttcgtccttgtaatcctcaaat 278
                ||||||||||| |||||||| || |||||| |||  ||||| |||||||| |||||||||
Sbjct: 18499135 cattactcttcaacttcctttttgatttcttccaaaagttcatccttgtagtcctcaaat 18499194

                                                                            
Query: 279      gagccatcatatttactcactgtgccatcctccacaacccatatctggctcttctgctca 338
                |  |||||| ||||  |||| |||||||| || |||||||||||||  ||| ||||||||
Sbjct: 18499195 gttccatcaaatttgttcacagtgccatcttctacaacccatatctcactcctctgctca 18499254

                                                                            
Query: 339      tcagcacaaactcgagatatcaaccgcgagtcatggctaaccaagaccacacctccagtg 398
                ||  |||| |||| ||| ||||| | ||||||||||||||||||||||||||| ||||||
Sbjct: 18499255 tcgtcacacactctagagatcaatctcgagtcatggctaaccaagaccacaccaccagtg 18499314

                                                                            
Query: 399      aactcatccagagcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggc 458
                || |||||||| ||||||||||| ||||| |||||||||||||| | ||||||||| |||
Sbjct: 18499315 aattcatccagtgcatctgccaatgcatcgatactttgcatgtctaggtgatttgttggc 18499374

                                                                            
Query: 459      tcgtccagtaggagaatgtgaggatgcnacattgatatcgaagtgaacacaacacgggcc 518
                || ||||| ||||||||||| |||||  |||||||||| |||||||||||||||||||||
Sbjct: 18499375 tcatccagcaggagaatgtggggatgtgacattgatattgaagtgaacacaacacgggcc 18499434

                                       
Query: 519      ttntgaccaccagataacttaac 541
                || || ||||||||||| |||||
Sbjct: 18499435 ttctgtccaccagataatttaac 18499457
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>gb|AC093180.12| Oryza sativa chromosome 3 BAC OJ1004_D04 genomic sequence, complete
              sequence
          Length = 158170

 Score =  303 bits (153), Expect = 3e-79
 Identities = 280/323 (86%)
 Strand = Plus / Minus

                                                                          
Query: 219    cattactcttcgacttccttctttatttctgccattagttcgtccttgtaatcctcaaat 278
              ||||||||||| |||||||| || |||||| |||  ||||| |||||||| |||||||||
Sbjct: 138542 cattactcttcaacttcctttttgatttcttccaaaagttcatccttgtagtcctcaaat 138483

                                                                          
Query: 279    gagccatcatatttactcactgtgccatcctccacaacccatatctggctcttctgctca 338
              |  |||||| ||||  |||| |||||||| || |||||||||||||  ||| ||||||||
Sbjct: 138482 gttccatcaaatttgttcacagtgccatcttctacaacccatatctcactcctctgctca 138423

                                                                          
Query: 339    tcagcacaaactcgagatatcaaccgcgagtcatggctaaccaagaccacacctccagtg 398
              ||  |||| |||| ||| ||||| | ||||||||||||||||||||||||||| ||||||
Sbjct: 138422 tcgtcacacactctagagatcaatctcgagtcatggctaaccaagaccacaccaccagtg 138363

                                                                          
Query: 399    aactcatccagagcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggc 458
              || |||||||| ||||||||||| ||||| |||||||||||||| | ||||||||| |||
Sbjct: 138362 aattcatccagtgcatctgccaatgcatcgatactttgcatgtctaggtgatttgttggc 138303

                                                                          
Query: 459    tcgtccagtaggagaatgtgaggatgcnacattgatatcgaagtgaacacaacacgggcc 518
              || ||||| ||||||||||| |||||  |||||||||| |||||||||||||||||||||
Sbjct: 138302 tcatccagcaggagaatgtggggatgtgacattgatattgaagtgaacacaacacgggcc 138243

                                     
Query: 519    ttntgaccaccagataacttaac 541
              || || ||||||||||| |||||
Sbjct: 138242 ttctgtccaccagataatttaac 138220
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  303 bits (153), Expect = 3e-79
 Identities = 280/323 (86%)
 Strand = Plus / Plus

                                                                            
Query: 219      cattactcttcgacttccttctttatttctgccattagttcgtccttgtaatcctcaaat 278
                ||||||||||| |||||||| || |||||| |||  ||||| |||||||| |||||||||
Sbjct: 18493176 cattactcttcaacttcctttttgatttcttccaaaagttcatccttgtagtcctcaaat 18493235

                                                                            
Query: 279      gagccatcatatttactcactgtgccatcctccacaacccatatctggctcttctgctca 338
                |  |||||| ||||  |||| |||||||| || |||||||||||||  ||| ||||||||
Sbjct: 18493236 gttccatcaaatttgttcacagtgccatcttctacaacccatatctcactcctctgctca 18493295

                                                                            
Query: 339      tcagcacaaactcgagatatcaaccgcgagtcatggctaaccaagaccacacctccagtg 398
                ||  |||| |||| ||| ||||| | ||||||||||||||||||||||||||| ||||||
Sbjct: 18493296 tcgtcacacactctagagatcaatctcgagtcatggctaaccaagaccacaccaccagtg 18493355

                                                                            
Query: 399      aactcatccagagcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggc 458
                || |||||||| ||||||||||| ||||| |||||||||||||| | ||||||||| |||
Sbjct: 18493356 aattcatccagtgcatctgccaatgcatcgatactttgcatgtctaggtgatttgttggc 18493415

                                                                            
Query: 459      tcgtccagtaggagaatgtgaggatgcnacattgatatcgaagtgaacacaacacgggcc 518
                || ||||| ||||||||||| |||||  |||||||||| |||||||||||||||||||||
Sbjct: 18493416 tcatccagcaggagaatgtggggatgtgacattgatattgaagtgaacacaacacgggcc 18493475

                                       
Query: 519      ttntgaccaccagataacttaac 541
                || || ||||||||||| |||||
Sbjct: 18493476 ttctgtccaccagataatttaac 18493498
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>dbj|AK102700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103K23, full
            insert sequence
          Length = 2477

 Score =  303 bits (153), Expect = 3e-79
 Identities = 280/323 (86%)
 Strand = Plus / Minus

                                                                        
Query: 219  cattactcttcgacttccttctttatttctgccattagttcgtccttgtaatcctcaaat 278
            ||||||||||| |||||||| || |||||| |||  ||||| |||||||| |||||||||
Sbjct: 2207 cattactcttcaacttcctttttgatttcttccaaaagttcatccttgtagtcctcaaat 2148

                                                                        
Query: 279  gagccatcatatttactcactgtgccatcctccacaacccatatctggctcttctgctca 338
            |  |||||| ||||  |||| |||||||| || |||||||||||||  ||| ||||||||
Sbjct: 2147 gttccatcaaatttgttcacagtgccatcttctacaacccatatctcactcctctgctca 2088

                                                                        
Query: 339  tcagcacaaactcgagatatcaaccgcgagtcatggctaaccaagaccacacctccagtg 398
            ||  |||| |||| ||| ||||| | ||||||||||||||||||||||||||| ||||||
Sbjct: 2087 tcgtcacacactctagagatcaatctcgagtcatggctaaccaagaccacaccaccagtg 2028

                                                                        
Query: 399  aactcatccagagcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggc 458
            || |||||||| ||||||||||| ||||| |||||||||||||| | ||||||||| |||
Sbjct: 2027 aattcatccagtgcatctgccaatgcatcgatactttgcatgtctaggtgatttgttggc 1968

                                                                        
Query: 459  tcgtccagtaggagaatgtgaggatgcnacattgatatcgaagtgaacacaacacgggcc 518
            || ||||| ||||||||||| |||||  |||||||||| |||||||||||||||||||||
Sbjct: 1967 tcatccagcaggagaatgtggggatgtgacattgatattgaagtgaacacaacacgggcc 1908

                                   
Query: 519  ttntgaccaccagataacttaac 541
            || || ||||||||||| |||||
Sbjct: 1907 ttctgtccaccagataatttaac 1885
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>ref|NM_184650.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2133

 Score =  299 bits (151), Expect = 5e-78
 Identities = 278/321 (86%)
 Strand = Plus / Minus

                                                                        
Query: 221  ttactcttcgacttccttctttatttctgccattagttcgtccttgtaatcctcaaatga 280
            ||||||||| |||||||| || |||||| |||  ||||| |||||||| |||||||||| 
Sbjct: 2133 ttactcttcaacttcctttttgatttcttccaaaagttcatccttgtagtcctcaaatgt 2074

                                                                        
Query: 281  gccatcatatttactcactgtgccatcctccacaacccatatctggctcttctgctcatc 340
             |||||| ||||  |||| |||||||| || |||||||||||||  ||| ||||||||||
Sbjct: 2073 tccatcaaatttgttcacagtgccatcttctacaacccatatctcactcctctgctcatc 2014

                                                                        
Query: 341  agcacaaactcgagatatcaaccgcgagtcatggctaaccaagaccacacctccagtgaa 400
              |||| |||| ||| ||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 2013 gtcacacactctagagatcaatctcgagtcatggctaaccaagaccacaccaccagtgaa 1954

                                                                        
Query: 401  ctcatccagagcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctc 460
             |||||||| ||||||||||| ||||| |||||||||||||| | ||||||||| |||||
Sbjct: 1953 ttcatccagtgcatctgccaatgcatcgatactttgcatgtctaggtgatttgttggctc 1894

                                                                        
Query: 461  gtccagtaggagaatgtgaggatgcnacattgatatcgaagtgaacacaacacgggcctt 520
             ||||| ||||||||||| |||||  |||||||||| |||||||||||||||||||||||
Sbjct: 1893 atccagcaggagaatgtggggatgtgacattgatattgaagtgaacacaacacgggcctt 1834

                                 
Query: 521  ntgaccaccagataacttaac 541
             || ||||||||||| |||||
Sbjct: 1833 ctgtccaccagataatttaac 1813
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>dbj|AK060827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B11, full
            insert sequence
          Length = 1712

 Score =  287 bits (145), Expect = 2e-74
 Identities = 278/323 (86%)
 Strand = Plus / Minus

                                                                        
Query: 219  cattactcttcgacttccttctttatttctgccattagttcgtccttgtaatcctcaaat 278
            ||||||||||| |||||||| || |||||| |||  ||||| |||||||| |||||||||
Sbjct: 1450 cattactcttcaacttcctttttgatttcttccaaaagttcatccttgtagtcctcaaat 1391

                                                                        
Query: 279  gagccatcatatttactcactgtgccatcctccacaacccatatctggctcttctgctca 338
            |  |||||| ||||  |||| |||||||| || |||||||||||||  ||| |||||| |
Sbjct: 1390 gttccatcaaatttgttcacagtgccatcttctacaacccatatctcactcctctgctta 1331

                                                                        
Query: 339  tcagcacaaactcgagatatcaaccgcgagtcatggctaaccaagaccacacctccagtg 398
            ||  |||| |||| ||| ||||| | |||||||||||||||||||||||| || ||||||
Sbjct: 1330 tcgtcacacactctagagatcaatctcgagtcatggctaaccaagaccacgccaccagtg 1271

                                                                        
Query: 399  aactcatccagagcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggc 458
            || |||||||| ||||||||||| ||||| |||||||||||||| | ||||||||| |||
Sbjct: 1270 aattcatccagtgcatctgccaatgcatcgatactttgcatgtctaggtgatttgttggc 1211

                                                                        
Query: 459  tcgtccagtaggagaatgtgaggatgcnacattgatatcgaagtgaacacaacacgggcc 518
            || ||||| ||||||||||| |||||  |||||||||| |||||||||||||||||||||
Sbjct: 1210 tcatccagcaggagaatgtggggatgtgacattgatattgaagtgaacacaacacgggcc 1151

                                   
Query: 519  ttntgaccaccagataacttaac 541
            || || ||||||||||| |||||
Sbjct: 1150 ttctgtccaccagataatttaac 1128
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>ref|NM_115311.2| Arabidopsis thaliana ATGCN4 AT3G54540 (ATGCN4) mRNA, complete cds
          Length = 2498

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 175/217 (80%)
 Strand = Plus / Minus

                                                                        
Query: 295  tcactgtgccatcctccacaacccatatctggctcttctgctcatcagcacaaactcgag 354
            ||||||| || || || |||||||| || || ||||||| ||| || ||||| || || |
Sbjct: 2196 tcactgttccgtcttctacaacccaaatttgactcttctcctcttccgcacatacacgtg 2137

                                                                        
Query: 355  atatcaaccgcgagtcatggctaaccaagaccacacctccagtgaactcatccagagcat 414
            |||| |  | |||||| || || ||||| || || || || ||||||||||| || ||||
Sbjct: 2136 atatgagtctcgagtcgtgactcaccaacacaactccacctgtgaactcatctagtgcat 2077

                                                                        
Query: 415  ctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtaggagaa 474
            | ||||| ||||| ||||| |||||||| ||||||||||||||||||||||| || | ||
Sbjct: 2076 ccgccaaggcatctatactctgcatgtctaagtgatttgtaggctcgtccagaagcaaaa 2017

                                                 
Query: 475  tgtgaggatgcnacattgatatcgaagtgaacacaac 511
            |||| || |   ||||||| ||||| |||||||||||
Sbjct: 2016 tgtgtggttttgacattgagatcgaggtgaacacaac 1980
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>gb|BT008795.1| Arabidopsis thaliana At3g54540 gene, complete cds
          Length = 2172

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 175/217 (80%)
 Strand = Plus / Minus

                                                                        
Query: 295  tcactgtgccatcctccacaacccatatctggctcttctgctcatcagcacaaactcgag 354
            ||||||| || || || |||||||| || || ||||||| ||| || ||||| || || |
Sbjct: 2098 tcactgttccgtcttctacaacccaaatttgactcttctcctcttccgcacatacacgtg 2039

                                                                        
Query: 355  atatcaaccgcgagtcatggctaaccaagaccacacctccagtgaactcatccagagcat 414
            |||| |  | |||||| || || ||||| || || || || ||||||||||| || ||||
Sbjct: 2038 atatgagtctcgagtcgtgactcaccaacacaactccacctgtgaactcatctagtgcat 1979

                                                                        
Query: 415  ctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtaggagaa 474
            | ||||| ||||| ||||| |||||||| ||||||||||||||||||||||| || | ||
Sbjct: 1978 ccgccaaggcatctatactctgcatgtctaagtgatttgtaggctcgtccagaagcaaaa 1919

                                                 
Query: 475  tgtgaggatgcnacattgatatcgaagtgaacacaac 511
            |||| || |   ||||||| ||||| |||||||||||
Sbjct: 1918 tgtgtggttttgacattgagatcgaggtgaacacaac 1882
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>emb|AL138656.2|ATT14E10 Arabidopsis thaliana DNA chromosome 3, BAC clone T14E10
          Length = 94911

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 175/217 (80%)
 Strand = Plus / Minus

                                                                         
Query: 295   tcactgtgccatcctccacaacccatatctggctcttctgctcatcagcacaaactcgag 354
             ||||||| || || || |||||||| || || ||||||| ||| || ||||| || || |
Sbjct: 61218 tcactgttccgtcttctacaacccaaatttgactcttctcctcttccgcacatacacgtg 61159

                                                                         
Query: 355   atatcaaccgcgagtcatggctaaccaagaccacacctccagtgaactcatccagagcat 414
             |||| |  | |||||| || || ||||| || || || || ||||||||||| || ||||
Sbjct: 61158 atatgagtctcgagtcgtgactcaccaacacaactccacctgtgaactcatctagtgcat 61099

                                                                         
Query: 415   ctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtaggagaa 474
             | ||||| ||||| ||||| |||||||| ||||||||||||||||||||||| || | ||
Sbjct: 61098 ccgccaaggcatctatactctgcatgtctaagtgatttgtaggctcgtccagaagcaaaa 61039

                                                  
Query: 475   tgtgaggatgcnacattgatatcgaagtgaacacaac 511
             |||| || |   ||||||| ||||| |||||||||||
Sbjct: 61038 tgtgtggttttgacattgagatcgaggtgaacacaac 61002
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>gb|AY054525.1| Arabidopsis thaliana ABC transporter-like protein (At3g54540;
            T14E10_110) mRNA, complete cds
          Length = 2423

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 175/217 (80%)
 Strand = Plus / Minus

                                                                        
Query: 295  tcactgtgccatcctccacaacccatatctggctcttctgctcatcagcacaaactcgag 354
            ||||||| || || || |||||||| || || ||||||| ||| || ||||| || || |
Sbjct: 2196 tcactgttccgtcttctacaacccaaatttgactcttctcctcttccgcacatacacgtg 2137

                                                                        
Query: 355  atatcaaccgcgagtcatggctaaccaagaccacacctccagtgaactcatccagagcat 414
            |||| |  | |||||| || || ||||| || || || || ||||||||||| || ||||
Sbjct: 2136 atatgagtctcgagtcgtgactcaccaacacaactccacctgtgaactcatctagtgcat 2077

                                                                        
Query: 415  ctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtaggagaa 474
            | ||||| ||||| ||||| |||||||| ||||||||||||||||||||||| || | ||
Sbjct: 2076 ccgccaaggcatctatactctgcatgtctaagtgatttgtaggctcgtccagaagcaaaa 2017

                                                 
Query: 475  tgtgaggatgcnacattgatatcgaagtgaacacaac 511
            |||| || |   ||||||| ||||| |||||||||||
Sbjct: 2016 tgtgtggttttgacattgagatcgaggtgaacacaac 1980
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>gb|AY084906.1| Arabidopsis thaliana clone 120919 mRNA, complete sequence
          Length = 2349

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 175/217 (80%)
 Strand = Plus / Minus

                                                                        
Query: 295  tcactgtgccatcctccacaacccatatctggctcttctgctcatcagcacaaactcgag 354
            ||||||| || || || |||||||| || || ||||||| ||| || ||||| || || |
Sbjct: 2192 tcactgttccgtcttctacaacccaaatttgactcttctcctcttccgcacatacacgtg 2133

                                                                        
Query: 355  atatcaaccgcgagtcatggctaaccaagaccacacctccagtgaactcatccagagcat 414
            |||| |  | |||||| || || ||||| || || || || ||||||||||| || ||||
Sbjct: 2132 atatgagtctcgagtcgtgactcaccaacacaactccacctgtgaactcatctagtgcat 2073

                                                                        
Query: 415  ctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtaggagaa 474
            | ||||| ||||| ||||| |||||||| ||||||||||||||||||||||| || | ||
Sbjct: 2072 ccgccaaggcatctatactctgcatgtctaagtgatttgtaggctcgtccaggagcaaaa 2013

                                                 
Query: 475  tgtgaggatgcnacattgatatcgaagtgaacacaac 511
            |||| || |   ||||||| ||||| |||||||||||
Sbjct: 2012 tgtgtggttttgacattgagatcgaggtgaacacaac 1976
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>emb|AJ583008.1| Populus tremula x Populus tremuloides partial mRNA for ABC
            transporter (abc1 gene)
          Length = 2415

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 167/209 (79%)
 Strand = Plus / Minus

                                                                        
Query: 327  ctcttctgctcatcagcacaaactcgagatatcaaccgcgagtcatggctaaccaagacc 386
            |||||||  |||||| |||| || || |||||||| |  ||||| || || |||| ||||
Sbjct: 2268 ctcttctcttcatcatcacagacacgtgatatcaatctagagtcgtgactgaccaggacc 2209

                                                                        
Query: 387  acacctccagtgaactcatccagagcatctgccaaagcatcaatactttgcatgtccaag 446
            || || |||||||| ||||| || ||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 2208 accccgccagtgaattcatcaagcgcatcagccaaggcatcgatactttgcatatccaag 2149

                                                                        
Query: 447  tgatttgtaggctcgtccagtaggagaatgtgaggatgcnacattgatatcgaagtgaac 506
            || ||||| || |||||||  || ||||| || || |   |||||||||| || ||||| 
Sbjct: 2148 tggtttgtgggttcgtccaaaagtagaatatggggctttgacattgatattgatgtgaag 2089

                                         
Query: 507  acaacacgggccttntgaccaccagataa 535
            ||||| ||||| || || ||||| |||||
Sbjct: 2088 acaactcgggctttctgcccacctgataa 2060
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>gb|AC136504.23| Medicago truncatula clone mth2-13m6, complete sequence
          Length = 107180

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                         
Query: 393   ccagtgaactcatccagagcatctgccaaagcatcaatactttgcatgtccaagtgattt 452
             |||||||| |||||||| ||||| ||||| ||||||||||||||||| ||||  ||||||
Sbjct: 20764 ccagtgaattcatccagcgcatcagccaatgcatcaatactttgcatatccagatgattt 20705

                  
Query: 453   gtagg 457
             |||||
Sbjct: 20704 gtagg 20700
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>gb|AC116136.9| Mus musculus chromosome 5, clone RP23-116G17, complete sequence
          Length = 212184

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                          
Query: 411    gcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtagg 470
              |||||||||| |||||||||  | |  ||||||| |||||| |||||||||||||| | |
Sbjct: 127017 gcatctgccagagcatcaatggtctcgatgtccaggtgattggtaggctcgtccagaaag 126958

                         
Query: 471    agaatgtgagg 481
              || ||||||||
Sbjct: 126957 agcatgtgagg 126947
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>gb|BC003300.1| Mus musculus ATP-binding cassette, sub-family F (GCN20), member 2,
            mRNA (cDNA clone MGC:7932 IMAGE:3583837), complete cds
          Length = 2488

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                        
Query: 411  gcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtagg 470
            |||||||||| |||||||||  | |  ||||||| |||||| |||||||||||||| | |
Sbjct: 1741 gcatctgccagagcatcaatggtctcgatgtccaggtgattggtaggctcgtccagaaag 1682

                       
Query: 471  agaatgtgagg 481
            || ||||||||
Sbjct: 1681 agcatgtgagg 1671
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>ref|NM_013853.1| Mus musculus ATP-binding cassette, sub-family F (GCN20), member 2
            (Abcf2), mRNA
          Length = 2488

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                        
Query: 411  gcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtagg 470
            |||||||||| |||||||||  | |  ||||||| |||||| |||||||||||||| | |
Sbjct: 1741 gcatctgccagagcatcaatggtctcgatgtccaggtgattggtaggctcgtccagaaag 1682

                       
Query: 471  agaatgtgagg 481
            || ||||||||
Sbjct: 1681 agcatgtgagg 1671
to top
>dbj|AK137233.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530059E24 product:ATP-binding
            cassette, sub-family F (GCN20), member 2, full insert
            sequence
          Length = 2502

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                        
Query: 411  gcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtagg 470
            |||||||||| |||||||||  | |  ||||||| |||||| |||||||||||||| | |
Sbjct: 1781 gcatctgccagagcatcaatggtctcgatgtccaggtgattggtaggctcgtccagaaag 1722

                       
Query: 471  agaatgtgagg 481
            || ||||||||
Sbjct: 1721 agcatgtgagg 1711
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>dbj|AK147937.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library,
            clone:G270109C21 product:ATP-binding cassette, sub-family
            F (GCN20), member 2, full insert sequence
          Length = 2529

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                        
Query: 411  gcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtagg 470
            |||||||||| |||||||||  | |  ||||||| |||||| |||||||||||||| | |
Sbjct: 1804 gcatctgccagagcatcaatggtctcgatgtccaggtgattggtaggctcgtccagaaag 1745

                       
Query: 471  agaatgtgagg 481
            || ||||||||
Sbjct: 1744 agcatgtgagg 1734
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>dbj|AK151545.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830031J05 product:ATP-binding cassette,
            sub-family F (GCN20), member 2, full insert sequence
          Length = 2525

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                        
Query: 411  gcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtagg 470
            |||||||||| |||||||||  | |  ||||||| |||||| |||||||||||||| | |
Sbjct: 1805 gcatctgccagagcatcaatggtctcgatgtccaggtgattggtaggctcgtccagaaag 1746

                       
Query: 471  agaatgtgagg 481
            || ||||||||
Sbjct: 1745 agcatgtgagg 1735
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>dbj|AK087990.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430001O06
            product:ATP-BINDING CASSETTE, SUB-FAMILY F, MEMBER 2
            (IRON INHIBITED ABC TRANSPORTER 2) homolog [Homo
            sapiens], full insert sequence
          Length = 2473

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                        
Query: 411  gcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtagg 470
            |||||||||| |||||||||  | |  ||||||| |||||| |||||||||||||| | |
Sbjct: 1751 gcatctgccagagcatcaatggtctcgatgtccaggtgattggtaggctcgtccagaaag 1692

                       
Query: 471  agaatgtgagg 481
            || ||||||||
Sbjct: 1691 agcatgtgagg 1681
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>gb|AF213382.1|AF213382 Mus musculus ATP-binding cassette protein (Abcf2) mRNA, partial cds
          Length = 982

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                       
Query: 411 gcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtagg 470
           |||||||||| |||||||||  | |  ||||||| |||||| |||||||||||||| | |
Sbjct: 563 gcatctgccagagcatcaatggtctcgatgtccaggtgattggtaggctcgtccagaaag 504

                      
Query: 471 agaatgtgagg 481
           || ||||||||
Sbjct: 503 agcatgtgagg 493
to top
>gb|AC134763.4| Rattus norvegicus  BAC CH230-221M14 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 222524

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                          
Query: 411    gcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtagg 470
              |||||||||| |||||||||  | |  ||||||| |||||| |||||||||||||| | |
Sbjct: 188086 gcatctgccagagcatcaatggtctcgatgtccaggtgattggtaggctcgtccagaaag 188145

                           
Query: 471    agaatgtgaggat 483
              || ||||| ||||
Sbjct: 188146 agcatgtgcggat 188158
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>ref|XM_575628.1| PREDICTED: Rattus norvegicus similar to ATP-binding cassette,
            sub-family F (GCN20), member 2 (LOC500278), mRNA
          Length = 2445

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 411  gcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtagg 470
            |||||||||| |||||||||  | |  ||||||| |||||| |||||||||||||| | |
Sbjct: 1736 gcatctgccagagcatcaatggtctcgatgtccaggtgattggtaggctcgtccagaaag 1677

                         
Query: 471  agaatgtgaggat 483
            || ||||| ||||
Sbjct: 1676 agcatgtgcggat 1664
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>ref|XM_231307.3| PREDICTED: Rattus norvegicus ATP-binding cassette, sub-family F
            (GCN20), member 2 (predicted) (Abcf2_predicted), mRNA
          Length = 2455

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 411  gcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtagg 470
            |||||||||| |||||||||  | |  ||||||| |||||| |||||||||||||| | |
Sbjct: 1738 gcatctgccagagcatcaatggtctcgatgtccaggtgattggtaggctcgtccagaaag 1679

                         
Query: 471  agaatgtgaggat 483
            || ||||| ||||
Sbjct: 1678 agcatgtgcggat 1666
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>dbj|AK209085.1| Mus musculus cDNA, clone:Y2G0113O10, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000030795, based on BLAT search
          Length = 381

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 411 gcatctgccaaagcatcaatactttgcatgtccaagtgatttgtaggctcgtccagtagg 470
           |||||||||| |||||||||  | |  || |||| |||||| |||||||||||||| | |
Sbjct: 131 gcatctgccagagcatcaatggtctcgatntccaggtgattggtaggctcgtccagaaag 72

                      
Query: 471 agaatgtgagg 481
           || ||||||||
Sbjct: 71  agcatgtgagg 61
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 232    cttccttctttatttctgccat 253
              ||||||||||||||||||||||
Sbjct: 208051 cttccttctttatttctgccat 208030
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>gb|AC113593.14| Mus musculus chromosome 15, clone RP23-363I24, complete sequence
          Length = 170090

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 233    ttccttctttatttctgccat 253
              |||||||||||||||||||||
Sbjct: 144465 ttccttctttatttctgccat 144485



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 233   ttccttctttatttctgccat 253
             |||||||||||||||||||||
Sbjct: 93867 ttccttctttatttctgccat 93847
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>dbj|AP003923.1| Mus musculus genomic DNA, chromosome 2, clone:B478c13, complete
             sequence
          Length = 171634

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 194   gcactgtgcagctcaatatgaacag 218
             ||||||||||||||| |||||||||
Sbjct: 29027 gcactgtgcagctcagtatgaacag 29051
to top
>gb|DQ086211.1| Ictalurus punctatus ATP-binding cassette sub-family F mRNA, partial
           cds
          Length = 375

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 438 atgtccaagtgatttgtaggctcgtccag 466
           ||||||| |||||| ||||||||||||||
Sbjct: 203 atgtccaggtgattggtaggctcgtccag 175
to top
>gb|AC132878.13| Mus musculus chromosome 15, clone RP24-223D21, complete sequence
          Length = 145479

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 233   ttccttctttatttctgccat 253
             |||||||||||||||||||||
Sbjct: 17649 ttccttctttatttctgccat 17669
to top
>dbj|AK040905.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530043E24
            product:unclassifiable, full insert sequence
          Length = 3851

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 194  gcactgtgcagctcaatatgaacag 218
            ||||||||||||||| |||||||||
Sbjct: 3522 gcactgtgcagctcagtatgaacag 3498
to top
>emb|AL929021.13| Mouse DNA sequence from clone RP23-89H14 on chromosome 2, complete
              sequence
          Length = 181549

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 194    gcactgtgcagctcaatatgaacag 218
              ||||||||||||||| |||||||||
Sbjct: 129785 gcactgtgcagctcagtatgaacag 129761
to top
>dbj|AP005858.1| Mus musculus genomic DNA, chromosome 2 clone:B478C13, complete sequence
          Length = 174714

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 194   gcactgtgcagctcaatatgaacag 218
             ||||||||||||||| |||||||||
Sbjct: 29027 gcactgtgcagctcagtatgaacag 29051
to top
>emb|AL672066.10| Mouse DNA sequence from clone RP23-311G7 on chromosome X, complete
             sequence
          Length = 152281

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   acatcctgtagaccaaagcaa 131
             |||||||||||||||||||||
Sbjct: 70828 acatcctgtagaccaaagcaa 70808
to top
>gb|CP000149.1| Geobacter metallireducens GS-15 plasmid, complete genome
          Length = 13762

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 313  caacccatatctggctcttc 332
            ||||||||||||||||||||
Sbjct: 2584 caacccatatctggctcttc 2603
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 313     caacccatatctggctcttc 332
               ||||||||||||||||||||
Sbjct: 3865387 caacccatatctggctcttc 3865368



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 313     caacccatatctggctcttc 332
               ||||||||||||||||||||
Sbjct: 3585306 caacccatatctggctcttc 3585287



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 313     caacccatatctggctcttc 332
               ||||||||||||||||||||
Sbjct: 3538989 caacccatatctggctcttc 3538970



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 313     caacccatatctggctcttc 332
               ||||||||||||||||||||
Sbjct: 3426211 caacccatatctggctcttc 3426192



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 313     caacccatatctggctcttc 332
               ||||||||||||||||||||
Sbjct: 2846691 caacccatatctggctcttc 2846710



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 313     caacccatatctggctcttc 332
               ||||||||||||||||||||
Sbjct: 2697855 caacccatatctggctcttc 2697836



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 313     caacccatatctggctcttc 332
               ||||||||||||||||||||
Sbjct: 2357102 caacccatatctggctcttc 2357121



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 313     caacccatatctggctcttc 332
               ||||||||||||||||||||
Sbjct: 1891517 caacccatatctggctcttc 1891498



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 313     caacccatatctggctcttc 332
               ||||||||||||||||||||
Sbjct: 1476161 caacccatatctggctcttc 1476180
to top
>emb|CR847808.6| Zebrafish DNA sequence from clone CH211-151I8 in linkage group 22,
              complete sequence
          Length = 147994

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    atcaatactttgcatgtcca 444
              ||||||||||||||||||||
Sbjct: 114962 atcaatactttgcatgtcca 114981
to top
>gb|AC146141.2| Pan troglodytes BAC clone RP43-3A23 from 7, complete sequence
          Length = 182547

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   cacacctccagtgaactcat 405
             ||||||||||||||||||||
Sbjct: 87417 cacacctccagtgaactcat 87436
to top
>gb|AC146200.2| Pan troglodytes BAC clone RP43-34F23 from 7, complete sequence
          Length = 160638

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    cacacctccagtgaactcat 405
              ||||||||||||||||||||
Sbjct: 122056 cacacctccagtgaactcat 122075
to top
>emb|AL591395.2| Human DNA sequence from clone RP13-103J3 on chromosome X, complete
             sequence
          Length = 61812

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aaacaataccatattaccag 34
             ||||||||||||||||||||
Sbjct: 15339 aaacaataccatattaccag 15320
to top
>emb|AL359382.23| Human DNA sequence from clone RP11-631F7 on chromosome 6 Contains the 3'
              part of a novel gene, a novel gene and a CpG island,
              complete sequence
          Length = 183935

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 385    ccacacctccagtgaactcatcca 408
              ||||||||||||||||||| ||||
Sbjct: 134083 ccacacctccagtgaactcctcca 134106
to top
>emb|AL035604.16|HS38C16 Human DNA sequence from clone RP1-38C16 on chromosome 6q22.33-24.1
              Contains a glyceraldehde-3-phosphate dehydrogenase (GAPD)
              pseudogene, a novel gene, a high-mobility group
              (non-histone chromosomal) protein 1-like 1 (HMG1L1)
              pseudogene and a novel gene, complete sequence
          Length = 139515

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     tatagatatcacgcacacaaaaaa 102
              |||||| |||||||||||||||||
Sbjct: 135309 tatagacatcacgcacacaaaaaa 135332
to top
>emb|CR378668.1| Photobacterium profundum SS9; segment 6/12
          Length = 348128

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 522   tgaccaccagataacttaac 541
             ||||||||||||||||||||
Sbjct: 42777 tgaccaccagataacttaac 42758
to top
>emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 11/11
          Length = 307337

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 438   atgtccaagtgatttgtaggctcgtccagtaggagaatgt 477
             |||||||||||||| || ||||| ||||| || |||||||
Sbjct: 57270 atgtccaagtgattcgtcggctcatccagcagcagaatgt 57231
to top
>emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BAC clone F3L17 (ESSA project)
          Length = 94319

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 225   tcttcgacttccttctttatttct 248
             ||||||| ||||||||||||||||
Sbjct: 21696 tcttcgatttccttctttatttct 21719
to top
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75
          Length = 196242

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 225  tcttcgacttccttctttatttct 248
            ||||||| ||||||||||||||||
Sbjct: 9761 tcttcgatttccttctttatttct 9784
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>emb|AL021633.2|ATF8F16 Arabidopsis thaliana DNA chromosome 4, BAC clone F8F16 (ESSA project)
          Length = 93038

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 225   tcttcgacttccttctttatttct 248
             ||||||| ||||||||||||||||
Sbjct: 83579 tcttcgatttccttctttatttct 83602
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>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113
          Length = 1841713

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aatcacacagaagcaaacaa 20
              ||||||||||||||||||||
Sbjct: 109171 aatcacacagaagcaaacaa 109152
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>gb|AC006525.1| Homo sapiens chromosome 5 clone RP1-4O17, complete sequence
          Length = 90604

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 238   tctttatttctgccattagttcgt 261
             |||||||||||||||||| |||||
Sbjct: 39511 tctttatttctgccattatttcgt 39534
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>gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, complete sequence
          Length = 120910

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   cacacctccagtgaactcat 405
             ||||||||||||||||||||
Sbjct: 16824 cacacctccagtgaactcat 16805
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>gb|AC091615.3| Homo sapiens chromosome 1 clone RP5-840P12, complete sequence
          Length = 84326

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   cacacctccagtgaactcat 405
             ||||||||||||||||||||
Sbjct: 31522 cacacctccagtgaactcat 31541
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>gb|AC092809.2| Homo sapiens chromosome 1 clone RP11-365O16, complete sequence
          Length = 197621

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   gaccaaagcaaacaaaatct 140
             ||||||||||||||||||||
Sbjct: 73864 gaccaaagcaaacaaaatct 73883
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>gb|AC093545.1| Homo sapiens chromosome X clone RP5-1015P16A, complete sequence
          Length = 174725

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   cacacctccagtgaactcat 405
             ||||||||||||||||||||
Sbjct: 55810 cacacctccagtgaactcat 55791
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>gb|AC074350.5| Homo sapiens BAC clone RP11-742M10 from 2, complete sequence
          Length = 105043

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    caaacaataccatattacca 33
             ||||||||||||||||||||
Sbjct: 36583 caaacaataccatattacca 36564
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>gb|AC155831.7| Mus musculus 10 BAC RP24-189B10 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 197153

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   tttactcactgtgccatcct 309
             ||||||||||||||||||||
Sbjct: 64884 tttactcactgtgccatcct 64865
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>gb|AC153525.12| Mus musculus 10 BAC RP23-440I21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 199418

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    tttactcactgtgccatcct 309
              ||||||||||||||||||||
Sbjct: 176468 tttactcactgtgccatcct 176449
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>gb|AC106783.3| Homo sapiens chromosome 16 clone RP11-347K10, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    atcttgtaacatagggaagg 55
             ||||||||||||||||||||
Sbjct: 87799 atcttgtaacatagggaagg 87818
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>gb|AC023108.4| Homo sapiens BAC clone RP11-121I13 from 2, complete sequence
          Length = 173794

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 cacacctccagtgaactcat 405
           ||||||||||||||||||||
Sbjct: 706 cacacctccagtgaactcat 725
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>gb|AY167567.1| Geobacter metallireducens putative ferredoxin gene, partial cds;
           hypothetical protein gene, complete cds; and putative
           transposase gene, partial cds
          Length = 1830

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 caacccatatctggctcttc 332
           ||||||||||||||||||||
Sbjct: 911 caacccatatctggctcttc 930
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>gb|AC155920.3| Monodelphis domestica, clone XX-22D10, complete sequence
          Length = 138660

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   cttccttctttatttctgcc 251
             ||||||||||||||||||||
Sbjct: 57853 cttccttctttatttctgcc 57834
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>emb|BX321898.29| Zebrafish DNA sequence from clone DKEYP-34C12 in linkage group 22,
             complete sequence
          Length = 195042

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   atcaatactttgcatgtcca 444
             ||||||||||||||||||||
Sbjct: 82395 atcaatactttgcatgtcca 82376
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>gb|AC090015.6| Homo sapiens 12 BAC RP11-711C17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 186236

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 270   tcctcaaatgagccatcatattta 293
             |||||||||||||||| |||||||
Sbjct: 28388 tcctcaaatgagccattatattta 28365
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>gb|AC007486.1|AC007486 Homo sapiens clone DJ1015P16A, complete sequence
          Length = 174725

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   cacacctccagtgaactcat 405
             ||||||||||||||||||||
Sbjct: 55810 cacacctccagtgaactcat 55791
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>emb|BX545855.16| Zebrafish DNA sequence from clone CH211-212N6 in linkage group 9,
              complete sequence
          Length = 204962

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 92     cacacaaaaaacaatatgaacatc 115
              ||||||||||||||||| ||||||
Sbjct: 129381 cacacaaaaaacaatattaacatc 129358


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,277,598
Number of Sequences: 3902068
Number of extensions: 5277598
Number of successful extensions: 121696
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121449
Number of HSP's gapped (non-prelim): 247
length of query: 544
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 521
effective length of database: 17,143,297,704
effective search space: 8931658103784
effective search space used: 8931658103784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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