ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1b14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065664.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
3dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
4emb|X66860.1|SOCYSK S.oleracea cysk mRNA for O-acetylserine(thio... 60 8e-06
5dbj|D14722.1|SPICYSSY Spinacia oleracea mRNA for chloroplast cys... 60 8e-06
6gb|L05184.1|SPIOACET Spinacia oleracea chlorplast O-acetylserine... 60 8e-06
7gb|AY112530.1| Zea mays CL5251_1 mRNA sequence 56 1e-04
8dbj|AB029511.2| Solanum tuberosum PCS-1 mRNA for cytosolic cyste... 50 0.008
9gb|AF044172.1|AF044172 Solanum tuberosum cysteine synthase mRNA,... 50 0.008
10ref|NM_115838.3| Arabidopsis thaliana OASC; cysteine synthase AT... 48 0.031
11ref|NM_180691.1| Arabidopsis thaliana OASC; cysteine synthase AT... 48 0.031
12emb|AJ271727.1|ATH271727 Arabidopsis thaliana partial mRNA for O... 48 0.031
13gb|AY128885.1| Arabidopsis thaliana cysteine synthase (At3g59760... 48 0.031
14gb|AY099721.1| Arabidopsis thaliana cysteine synthase (At3g59760... 48 0.031
15dbj|AK220762.1| Arabidopsis thaliana mRNA for cysteine synthase,... 48 0.031
16emb|BX823399.1|CNS0A6L6 Arabidopsis thaliana Full-length cDNA Co... 48 0.031
17gb|AY766093.1| Allium sativum chloroplast cysteine synthase GCS2... 44 0.48
18gb|AC018618.5|AC018618 Homo sapiens chromosome 15, clone RP11-16... 44 0.48
19emb|AJ299249.1|NTA299249 Nicotiana tabacum mRNA for cysteine syn... 42 1.9
20gb|AC008212.8|AC008212 Drosophila melanogaster, chromosome 3R, r... 42 1.9
21gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94... 42 1.9
22dbj|AB040503.1| Allium tuberosum Bsas1 mRNA for cysteine synthas... 42 1.9
23ref|NM_180692.1| Arabidopsis thaliana OASC; cysteine synthase AT... 40 7.5
24ref|NM_189518.1| Oryza sativa (japonica cultivar-group), predic... 40 7.5
25gb|U41010.2| Caenorhabditis elegans cosmid T05A12, complete sequ... 40 7.5
26gb|AC163894.2| Glomus intraradices clone JGIATSX-9F17, complete ... 40 7.5
27gb|AC125528.4| Mus musculus BAC clone RP23-365I9 from chromosome... 40 7.5
28gb|AC074085.7| Homo sapiens BAC clone RP11-3L10 from 7, complete... 40 7.5
29gb|AC134521.41| Medicago truncatula clone mth2-31k24, complete s... 40 7.5
30gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete s... 40 7.5
31emb|AL928596.5| Human DNA sequence from clone RP11-1037J10 on ch... 40 7.5
32emb|AL590110.11| Human DNA sequence from clone RP11-254O21 on ch... 40 7.5
33emb|CR932957.2| Medicago truncatula chromosome 5 clone mth2-58c3... 40 7.5
34emb|BX950854.12| Zebrafish DNA sequence from clone CH211-125M22,... 40 7.5
35gb|AC007187.5| Arabidopsis thaliana chromosome 2 clone F7E22 map... 40 7.5
36ref|NM_068658.3| Caenorhabditis elegans T05A12.3 (T05A12.3) mRNA... 40 7.5
37dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
38gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosom... 40 7.5
39dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
40dbj|AP002062.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 7.5
41dbj|AK104704.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
42dbj|AK099217.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
43dbj|AK065652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
44dbj|AK065007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
45dbj|D28777.1|CNAPCCS7 Citrullus vulgaris mRNA for cysteine synth... 40 7.5
46gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
47emb|BX672566.2|CNS09SC4 Oryza sativa chromosome 12, . Partial se... 40 7.5
48gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 7.5
49dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 7.5
50gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 7.5
51dbj|D10476.1|SPIOAL Spinach mRNA for O-acetylserine(thiol)-lyase... 40 7.5 
>dbj|AK065664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039L03, full
            insert sequence
          Length = 1679

 Score =  232 bits (117), Expect = 1e-57
 Identities = 171/189 (90%)
 Strand = Plus / Minus

                                                                        
Query: 358  cttcctcatccttcgaacggagttgtatatcggacggaacaaaatgctagagatatatct 417
            ||||||||| ||||| || ||||  |||||||||||||| ||||||||||||||||||||
Sbjct: 1279 cttcctcattcttcggaccgagtcatatatcggacggaataaaatgctagagatatatct 1220

                                                                        
Query: 418  ctctccaaagctggggaagataacggcaatcagctttccagcattttcaggtcttttggc 477
             ||||||||||||||||| ||||| |||||||  ||||||||||||||||||||||| ||
Sbjct: 1219 ttctccaaagctggggaaaataaccgcaatcaattttccagcattttcaggtcttttagc 1160

                                                                        
Query: 478  cacgtttatagcagcaattgctgcagcacctgacgaaatgccaaccagcaagccctcttt 537
             ||||| |||||||||| ||  |||||||||||||||||||||||||||| |||||||||
Sbjct: 1159 gacgttaatagcagcaactgtggcagcacctgacgaaatgccaaccagcaggccctcttt 1100

                     
Query: 538  tagtgcaag 546
            |||||||||
Sbjct: 1099 tagtgcaag 1091
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  103 bits (52), Expect = 6e-19
 Identities = 76/84 (90%)
 Strand = Plus / Plus

                                                                            
Query: 358      cttcctcatccttcgaacggagttgtatatcggacggaacaaaatgctagagatatatct 417
                ||||||||| ||||| || ||||  |||||||||||||| ||||||||||||||||||||
Sbjct: 34640799 cttcctcattcttcggaccgagtcatatatcggacggaataaaatgctagagatatatct 34640858

                                        
Query: 418      ctctccaaagctggggaagataac 441
                 ||||||||||||||||| |||||
Sbjct: 34640859 ttctccaaagctggggaaaataac 34640882



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                            
Query: 443      gcaatcagctttccagcattttcaggtcttttggccacgtttatagcagcaattgctgca 502
                |||||||  ||||||||||||||||||||||| || ||||| |||||||||| ||  |||
Sbjct: 34640996 gcaatcaattttccagcattttcaggtcttttagcgacgttaatagcagcaactgtggca 34641055

                                     
Query: 503      gcacctgacgaaatgccaacc 523
                |||||||||||||||||||||
Sbjct: 34641056 gcacctgacgaaatgccaacc 34641076



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 521      accagcaagccctcttttagtgcaag 546
                ||||||| ||||||||||||||||||
Sbjct: 34641435 accagcaggccctcttttagtgcaag 34641460



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 451      ctttccagcattttcaggtctttt 474
                ||||||||||||||| ||||||||
Sbjct: 43224999 ctttccagcattttctggtctttt 43225022
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>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0085D07
          Length = 172483

 Score =  103 bits (52), Expect = 6e-19
 Identities = 76/84 (90%)
 Strand = Plus / Plus

                                                                         
Query: 358   cttcctcatccttcgaacggagttgtatatcggacggaacaaaatgctagagatatatct 417
             ||||||||| ||||| || ||||  |||||||||||||| ||||||||||||||||||||
Sbjct: 92816 cttcctcattcttcggaccgagtcatatatcggacggaataaaatgctagagatatatct 92875

                                     
Query: 418   ctctccaaagctggggaagataac 441
              ||||||||||||||||| |||||
Sbjct: 92876 ttctccaaagctggggaaaataac 92899



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                         
Query: 443   gcaatcagctttccagcattttcaggtcttttggccacgtttatagcagcaattgctgca 502
             |||||||  ||||||||||||||||||||||| || ||||| |||||||||| ||  |||
Sbjct: 93013 gcaatcaattttccagcattttcaggtcttttagcgacgttaatagcagcaactgtggca 93072

                                  
Query: 503   gcacctgacgaaatgccaacc 523
             |||||||||||||||||||||
Sbjct: 93073 gcacctgacgaaatgccaacc 93093



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 521   accagcaagccctcttttagtgcaag 546
             ||||||| ||||||||||||||||||
Sbjct: 93452 accagcaggccctcttttagtgcaag 93477
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>emb|X66860.1|SOCYSK S.oleracea cysk mRNA for O-acetylserine(thiol) lyase
          Length = 1432

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 413  tatctctctccaaagctggggaagataacggcaatcagctttccagcattttcaggtctt 472
            |||||||| |||||||| ||||| | ||| ||||| || ||||| |||||||||||||||
Sbjct: 1144 tatctctcaccaaagcttgggaacacaacagcaataagttttcctgcattttcaggtctt 1085

              
Query: 473  tt 474
            ||
Sbjct: 1084 tt 1083
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>dbj|D14722.1|SPICYSSY Spinacia oleracea mRNA for chloroplast cysteine synthase, complete
            cds
          Length = 1484

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 413  tatctctctccaaagctggggaagataacggcaatcagctttccagcattttcaggtctt 472
            |||||||| |||||||| ||||| | ||| ||||| || ||||| |||||||||||||||
Sbjct: 1152 tatctctcaccaaagcttgggaacacaacagcaataagttttcctgcattttcaggtctt 1093

              
Query: 473  tt 474
            ||
Sbjct: 1092 tt 1091
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>gb|L05184.1|SPIOACET Spinacia oleracea chlorplast O-acetylserine-(thiol)-lyase mRNA,
            complete cds
          Length = 1446

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 413  tatctctctccaaagctggggaagataacggcaatcagctttccagcattttcaggtctt 472
            |||||||| |||||||| ||||| | ||| ||||| || ||||| |||||||||||||||
Sbjct: 1151 tatctctcaccaaagcttgggaacacaacagcaataagttttcctgcattttcaggtctt 1092

              
Query: 473  tt 474
            ||
Sbjct: 1091 tt 1090
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>gb|AY112530.1| Zea mays CL5251_1 mRNA sequence
          Length = 1258

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 446 atcagctttccagcattttcaggtcttttggccacgtttatagcagca 493
           ||||||||||||||||| || ||||||||||| || ||||| ||||||
Sbjct: 866 atcagctttccagcattctctggtcttttggcaacctttatggcagca 819
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>dbj|AB029511.2| Solanum tuberosum PCS-1 mRNA for cytosolic cysteine synthase,
           complete cds
          Length = 1354

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 412 atatctctctccaaagctggggaagataacggcaatcagctttccagcattttcagg 468
           ||||| |||||| ||||| ||||| |||||  |||| ||||| ||||||||||||||
Sbjct: 999 atatcgctctccgaagcttgggaaaataacaacaatgagcttcccagcattttcagg 943
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>gb|AF044172.1|AF044172 Solanum tuberosum cysteine synthase mRNA, complete cds
          Length = 1308

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 412 atatctctctccaaagctggggaagataacggcaatcagctttccagcattttcagg 468
           ||||| |||||| ||||| ||||| |||||  |||| ||||| ||||||||||||||
Sbjct: 949 atatcgctctccgaagcttgggaaaataacaacaatgagcttcccagcattttcagg 893
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>ref|NM_115838.3| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC)
            transcript variant AT3G59760.3 mRNA, complete cds
          Length = 1558

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 96/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 412  atatctctctccaaagctggggaagataacggcaatcagctttccagcattttcaggtct 471
            ||||||||| || ||||| ||||| | ||| || || || ||||||||||| ||||||||
Sbjct: 1301 atatctctccccgaagctcgggaaaacaacagctatgagttttccagcattctcaggtct 1242

                                                                        
Query: 472  tttggccacgtttatagcagcaattgctgcagcacctgacgaaatgccaaccagcaagcc 531
             || ||||| || || ||||||   |||||||| || || || || ||||||| ||||||
Sbjct: 1241 cttagccaccttgattgcagcagcagctgcagctccagatgatataccaaccatcaagcc 1182
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>ref|NM_180691.1| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC)
            transcript variant AT3G59760.1 mRNA, complete cds
          Length = 1544

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 96/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 412  atatctctctccaaagctggggaagataacggcaatcagctttccagcattttcaggtct 471
            ||||||||| || ||||| ||||| | ||| || || || ||||||||||| ||||||||
Sbjct: 1301 atatctctccccgaagctcgggaaaacaacagctatgagttttccagcattctcaggtct 1242

                                                                        
Query: 472  tttggccacgtttatagcagcaattgctgcagcacctgacgaaatgccaaccagcaagcc 531
             || ||||| || || ||||||   |||||||| || || || || ||||||| ||||||
Sbjct: 1241 cttagccaccttgattgcagcagcagctgcagctccagatgatataccaaccatcaagcc 1182
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>emb|AJ271727.1|ATH271727 Arabidopsis thaliana partial mRNA for O-acetylserine (thiol) lyase
            (oasC gene)
          Length = 1377

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 96/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 412  atatctctctccaaagctggggaagataacggcaatcagctttccagcattttcaggtct 471
            ||||||||| || ||||| ||||| | ||| || || || ||||||||||| ||||||||
Sbjct: 1101 atatctctccccgaagctcgggaaaacaacagctatgagttttccagcattctcaggtct 1042

                                                                        
Query: 472  tttggccacgtttatagcagcaattgctgcagcacctgacgaaatgccaaccagcaagcc 531
             || ||||| || || ||||||   |||||||| || || || || ||||||| ||||||
Sbjct: 1041 cttagccaccttgattgcagcagcagctgcagctccagatgatataccaaccatcaagcc 982
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>gb|AY128885.1| Arabidopsis thaliana cysteine synthase (At3g59760) mRNA, complete cds
          Length = 1460

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 96/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 412  atatctctctccaaagctggggaagataacggcaatcagctttccagcattttcaggtct 471
            ||||||||| || ||||| ||||| | ||| || || || ||||||||||| ||||||||
Sbjct: 1230 atatctctccccgaagctcgggaaaacaacagctatgagttttccagcattctcaggtct 1171

                                                                        
Query: 472  tttggccacgtttatagcagcaattgctgcagcacctgacgaaatgccaaccagcaagcc 531
             || ||||| || || ||||||   |||||||| || || || || ||||||| ||||||
Sbjct: 1170 cttagccaccttgattgcagcagcagctgcagctccagatgatataccaaccatcaagcc 1111
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>gb|AY099721.1| Arabidopsis thaliana cysteine synthase (At3g59760) mRNA, complete cds
          Length = 1556

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 96/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 412  atatctctctccaaagctggggaagataacggcaatcagctttccagcattttcaggtct 471
            ||||||||| || ||||| ||||| | ||| || || || ||||||||||| ||||||||
Sbjct: 1300 atatctctccccgaagctcgggaaaacaacagctatgagttttccagcattctcaggtct 1241

                                                                        
Query: 472  tttggccacgtttatagcagcaattgctgcagcacctgacgaaatgccaaccagcaagcc 531
             || ||||| || || ||||||   |||||||| || || || || ||||||| ||||||
Sbjct: 1240 cttagccaccttgattgcagcagcagctgcagctccagatgatataccaaccatcaagcc 1181
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>dbj|AK220762.1| Arabidopsis thaliana mRNA for cysteine synthase, complete cds,
           clone: RAFL22-19-B22
          Length = 850

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 96/120 (80%)
 Strand = Plus / Minus

                                                                       
Query: 412 atatctctctccaaagctggggaagataacggcaatcagctttccagcattttcaggtct 471
           ||||||||| || ||||| ||||| | ||| || || || ||||||||||| ||||||||
Sbjct: 587 atatctctccccgaagctcgggaaaacaacagctatgagttttccagcattctcaggtct 528

                                                                       
Query: 472 tttggccacgtttatagcagcaattgctgcagcacctgacgaaatgccaaccagcaagcc 531
            || ||||| || || ||||||   |||||||| || || || || ||||||| ||||||
Sbjct: 527 cttagccaccttgattgcagcagcagctgcagctccagatgatataccaaccatcaagcc 468
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>emb|BX823399.1|CNS0A6L6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS32ZE09 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1500

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 96/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 412  atatctctctccaaagctggggaagataacggcaatcagctttccagcattttcaggtct 471
            ||||||||| || ||||| ||||| | ||| || || || ||||||||||| ||||||||
Sbjct: 1268 atatctctccccgaagctcgggaaaacaacagctatgagttttccagcattctcaggtct 1209

                                                                        
Query: 472  tttggccacgtttatagcagcaattgctgcagcacctgacgaaatgccaaccagcaagcc 531
             || ||||| || || ||||||   |||||||| || || || || ||||||| ||||||
Sbjct: 1208 cttagccaccttgattgcagcagcagctgcagctccagatgatataccaaccatcaagcc 1149
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>gb|AY766093.1| Allium sativum chloroplast cysteine synthase GCS2 (gcs2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1424

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                        
Query: 412  atatctctctccaaagctggggaagataacggcaatcagctttccagcattttcaggtct 471
            |||||| || |||||||| ||||||| ||| |  || || || || ||||||||||||||
Sbjct: 1124 atatctttcaccaaagcttgggaagacaaccgttatgagtttccctgcattttcaggtct 1065

                                  
Query: 472  tttggccacgtttatagcagca 493
            ||| || || || |||||||||
Sbjct: 1064 ttttgcgactttcatagcagca 1043
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>gb|AC018618.5|AC018618 Homo sapiens chromosome 15, clone RP11-162I7, complete sequence
          Length = 156542

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 188  gtgctgaagcccactcggcagc 209
            ||||||||||||||||||||||
Sbjct: 9122 gtgctgaagcccactcggcagc 9143
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>emb|AJ299249.1|NTA299249 Nicotiana tabacum mRNA for cysteine synthase (cs1 gene), clone 4T7
          Length = 1493

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 99/125 (79%)
 Strand = Plus / Minus

                                                                       
Query: 422 ccaaagctggggaagataacggcaatcagctttccagcattttcaggtcttttggccacg 481
           ||||| || ||||||||||| ||||| || || ||||||||||| ||  |||| || || 
Sbjct: 989 ccaaaactagggaagataaccgcaatgagtttcccagcattttctggcttttttgctact 930

                                                                       
Query: 482 tttatagcagcaattgctgcagcacctgacgaaatgccaaccagcaagccctcttttagt 541
           ||||| || |||   |||||||| || ||||| || || |||||||| || ||||| | |
Sbjct: 929 tttatcgctgcagcagctgcagcccccgacgatattcctaccagcaaaccttctttcaat 870

                
Query: 542 gcaag 546
           |||||
Sbjct: 869 gcaag 865
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>gb|AC008212.8|AC008212 Drosophila melanogaster, chromosome 3R, region 97A-97B, BAC clone
             BACR19L21, complete sequence
          Length = 162876

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 152   ccttccctcggttttttatgg 172
             |||||||||||||||||||||
Sbjct: 48462 ccttccctcggttttttatgg 48442
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>gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94 of 118 of the
             complete sequence
          Length = 322332

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 152   ccttccctcggttttttatgg 172
             |||||||||||||||||||||
Sbjct: 22309 ccttccctcggttttttatgg 22289
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>dbj|AB040503.1| Allium tuberosum Bsas1 mRNA for cysteine synthase, complete cds
          Length = 1671

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 412  atatctctctccaaagctggggaagataacggcaatcagctttcc 456
            ||||| ||| |||||||||||||||| |||  ||||||| |||||
Sbjct: 1331 atatcgctcgccaaagctggggaagacaaccacaatcagttttcc 1287



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 485  atagcagcaattgctgcagcacctgacgaaat 516
            |||||||||||||| ||||| || ||||||||
Sbjct: 1258 atagcagcaattgcagcagctccagacgaaat 1227
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>ref|NM_180692.1| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC)
            transcript variant AT3G59760.2 mRNA, complete cds
          Length = 1553

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                        
Query: 452  tttccagcattttcaggtcttttggccacgtttatagcagcaattgctgcagcacctgac 511
            ||||||||||| |||||||| || ||||| || || ||||||   |||||||| || || 
Sbjct: 1261 tttccagcattctcaggtctcttagccaccttgattgcagcagcagctgcagctccagat 1202

                                
Query: 512  gaaatgccaaccagcaagcc 531
            || || ||||||| ||||||
Sbjct: 1201 gatataccaaccatcaagcc 1182
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>ref|NM_189518.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1230

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 451  ctttccagcattttcaggtctttt 474
            ||||||||||||||| ||||||||
Sbjct: 1128 ctttccagcattttctggtctttt 1105
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>gb|U41010.2| Caenorhabditis elegans cosmid T05A12, complete sequence
          Length = 25228

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 490   agcaattgctgcagcacctg 509
             ||||||||||||||||||||
Sbjct: 13394 agcaattgctgcagcacctg 13375
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>gb|AC163894.2| Glomus intraradices clone JGIATSX-9F17, complete sequence
          Length = 37905

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 509  gacgaaatgccaaccagcaagccctctt 536
            ||||| ||||| ||||||||||||||||
Sbjct: 6864 gacgagatgccgaccagcaagccctctt 6837
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>gb|AC125528.4| Mus musculus BAC clone RP23-365I9 from chromosome 15, complete
            sequence
          Length = 197376

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 272  tgctgccctgcttgatgtgttatg 295
            |||| |||||||||||||||||||
Sbjct: 1197 tgcttccctgcttgatgtgttatg 1220
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>gb|AC074085.7| Homo sapiens BAC clone RP11-3L10 from 7, complete sequence
          Length = 155260

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 461   ttttcaggtcttttggccacgttt 484
             ||||||||||||||||||| ||||
Sbjct: 19484 ttttcaggtcttttggccatgttt 19507
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>gb|AC134521.41| Medicago truncatula clone mth2-31k24, complete sequence
          Length = 132267

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 124    agataacatacaacaactcatgat 147
              ||||||||||||||| ||||||||
Sbjct: 109896 agataacatacaacatctcatgat 109919
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>gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete sequence
          Length = 113836

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   agataacatacaacaactcatgat 147
             ||||||||||||||| ||||||||
Sbjct: 35372 agataacatacaacatctcatgat 35349
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>emb|AL928596.5| Human DNA sequence from clone RP11-1037J10 on chromosome X, complete
             sequence
          Length = 64394

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 263   tttctacaatgctgccctgcttga 286
             |||||||||| |||||||||||||
Sbjct: 38643 tttctacaatactgccctgcttga 38620
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>emb|AL590110.11| Human DNA sequence from clone RP11-254O21 on chromosome 1 Contains the
             3' end of a novel gene, complete sequence
          Length = 128843

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   atgctagagatatatctctc 420
             ||||||||||||||||||||
Sbjct: 22320 atgctagagatatatctctc 22339
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>emb|CR932957.2| Medicago truncatula chromosome 5 clone mth2-58c3, COMPLETE SEQUENCE
          Length = 136080

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 124    agataacatacaacaactcatgat 147
              ||||||||||||||| ||||||||
Sbjct: 114721 agataacatacaacatctcatgat 114744
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>emb|BX950854.12| Zebrafish DNA sequence from clone CH211-125M22, complete sequence
          Length = 171896

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    tgccagagcatttctacaat 272
              ||||||||||||||||||||
Sbjct: 171049 tgccagagcatttctacaat 171030
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>gb|AC007187.5| Arabidopsis thaliana chromosome 2 clone F7E22 map mi421, complete
             sequence
          Length = 98432

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   ctacaatgctgccctgcttg 285
             ||||||||||||||||||||
Sbjct: 47257 ctacaatgctgccctgcttg 47238
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>ref|NM_068658.3| Caenorhabditis elegans T05A12.3 (T05A12.3) mRNA, complete cds
          Length = 2325

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 490  agcaattgctgcagcacctg 509
            ||||||||||||||||||||
Sbjct: 1269 agcaattgctgcagcacctg 1288
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 120      aggcagataacatacaacaa 139
                ||||||||||||||||||||
Sbjct: 16244252 aggcagataacatacaacaa 16244271
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>gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosome 15, complete
             sequence
          Length = 177253

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 272   tgctgccctgcttgatgtgttatg 295
             |||| |||||||||||||||||||
Sbjct: 90114 tgcttccctgcttgatgtgttatg 90137
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>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0020E09
          Length = 149195

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 451    ctttccagcattttcaggtctttt 474
              ||||||||||||||| ||||||||
Sbjct: 112454 ctttccagcattttctggtctttt 112477
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>dbj|AP002062.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T22B15
          Length = 112406

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    ctacaatgctgccctgcttg 285
              ||||||||||||||||||||
Sbjct: 104702 ctacaatgctgccctgcttg 104683
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>dbj|AK104704.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-D03, full
            insert sequence
          Length = 1555

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 451  ctttccagcattttcaggtctttt 474
            ||||||||||||||| ||||||||
Sbjct: 1126 ctttccagcattttctggtctttt 1103
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>dbj|AK099217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079H24, full
            insert sequence
          Length = 1562

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 451  ctttccagcattttcaggtctttt 474
            ||||||||||||||| ||||||||
Sbjct: 1137 ctttccagcattttctggtctttt 1114
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>dbj|AK065652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035B06, full
            insert sequence
          Length = 2104

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 451  ctttccagcattttcaggtctttt 474
            ||||||||||||||| ||||||||
Sbjct: 1668 ctttccagcattttctggtctttt 1645
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>dbj|AK065007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E19, full
            insert sequence
          Length = 1602

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 451  ctttccagcattttcaggtctttt 474
            ||||||||||||||| ||||||||
Sbjct: 1174 ctttccagcattttctggtctttt 1151
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>dbj|D28777.1|CNAPCCS7 Citrullus vulgaris mRNA for cysteine synthase, complete cds
          Length = 1855

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 444  caatcagctttccagcattttcaggtct 471
            |||| ||||||||||||||||| |||||
Sbjct: 1446 caataagctttccagcattttctggtct 1419
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 120      aggcagataacatacaacaa 139
                ||||||||||||||||||||
Sbjct: 16197485 aggcagataacatacaacaa 16197504
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>emb|BX672566.2|CNS09SC4 Oryza sativa chromosome 12, . Partial sequence from BAC B1004E12 of
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 24190

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   aggcagataacatacaacaa 139
             ||||||||||||||||||||
Sbjct: 14107 aggcagataacatacaacaa 14126
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 529     gccctcttttagtgcaagca 548
               ||||||||||||||||||||
Sbjct: 1810090 gccctcttttagtgcaagca 1810071
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 529     gccctcttttagtgcaagca 548
               ||||||||||||||||||||
Sbjct: 1718154 gccctcttttagtgcaagca 1718135
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 529     gccctcttttagtgcaagca 548
               ||||||||||||||||||||
Sbjct: 1174607 gccctcttttagtgcaagca 1174588
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>dbj|D10476.1|SPIOAL Spinach mRNA for O-acetylserine(thiol)-lyase, complete cds
          Length = 1281

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 83/104 (79%)
 Strand = Plus / Minus

                                                                       
Query: 422 ccaaagctggggaagataacggcaatcagctttccagcattttcaggtcttttggccacg 481
           ||||||||||| |||| | || | || || ||||||||||||||||| || || ||||| 
Sbjct: 956 ccaaagctgggaaagacagcgacgatgagttttccagcattttcaggcctctttgccact 897

                                                       
Query: 482 tttatagcagcaattgctgcagcacctgacgaaatgccaaccag 525
           || || |||||    || |||||||| || ||||| ||||||||
Sbjct: 896 ttaatggcagcggcagcagcagcaccagatgaaatcccaaccag 853


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,653,199
Number of Sequences: 3902068
Number of extensions: 4653199
Number of successful extensions: 81814
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 81576
Number of HSP's gapped (non-prelim): 239
length of query: 551
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 528
effective length of database: 17,143,297,704
effective search space: 9051661187712
effective search space used: 9051661187712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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