>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 22      ttgctgctcagtttacattc 41
               ||||||||||||||||||||
Sbjct: 1209638 ttgctgctcagtttacattc 1209657

>ref|XR_003010.1| PREDICTED: Mus musculus similar to 40S ribosomal protein SA (p40)
           (34/67 kDa laminin receptor) (LOC545234), mRNA
          Length = 785

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 11  tgtgctgnaatttgctgctcag 32
           ||||||| ||||||||||||||
Sbjct: 255 tgtgctgaaatttgctgctcag 276

>ref|XR_004764.1| PREDICTED: Mus musculus similar to 40S ribosomal protein SA (p40)
           (34/67 kDa laminin receptor) (LOC545234), mRNA
          Length = 785

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 11  tgtgctgnaatttgctgctcag 32
           ||||||| ||||||||||||||
Sbjct: 255 tgtgctgaaatttgctgctcag 276

>gb|AC100724.10| Mus musculus chromosome 17, clone RP24-120E11, complete sequence
          Length = 179334

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 11     tgtgctgnaatttgctgctcag 32
              ||||||| ||||||||||||||
Sbjct: 141021 tgtgctgaaatttgctgctcag 141000

>emb|BX296532.7| Zebrafish DNA sequence from clone CH211-281C19 in linkage group 24,
             complete sequence
          Length = 155029

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    atttgctgctcagtttaca 38
             |||||||||||||||||||
Sbjct: 86093 atttgctgctcagtttaca 86111

>emb|BX784022.6| Zebrafish DNA sequence from clone CH211-152C8 in linkage group 18,
             complete sequence
          Length = 153244

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    atttgctgctcagtttaca 38
             |||||||||||||||||||
Sbjct: 86194 atttgctgctcagtttaca 86212

>gb|AC157024.7| Mus musculus 6 BAC RP24-549F4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 165219

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 26    tgctcagtttacattctt 43
             ||||||||||||||||||
Sbjct: 68099 tgctcagtttacattctt 68082

>gb|AC096776.1| Mus musculus BAC clone RP23-71F1 from X, complete sequence
          Length = 220119

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 26     tgctcagtttacattctt 43
              ||||||||||||||||||
Sbjct: 196831 tgctcagtttacattctt 196848



 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 26     tgctcagtttacattctt 43
              ||||||||||||||||||
Sbjct: 139133 tgctcagtttacattctt 139116

>ref|XM_760978.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_0552) partial mRNA
          Length = 1818

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 19   aatttgctgctcagttta 36
            ||||||||||||||||||
Sbjct: 1340 aatttgctgctcagttta 1323

>gb|AC023891.28| Homo sapiens 3 BAC RP13-81O8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 144189

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 22    ttgctgctcagtttacat 39
             ||||||||||||||||||
Sbjct: 41180 ttgctgctcagtttacat 41163

>emb|AL121896.11|HSA287B20 Human DNA sequence from clone RP11-287B20 on chromosome 20 Contains
             part of the gene for KIAA1272 for a protein similar to rat
             tulip proteins 1 and 2, complete sequence
          Length = 168545

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 26    tgctcagtttacattctt 43
             ||||||||||||||||||
Sbjct: 58309 tgctcagtttacattctt 58292

>gb|AC068641.18| Homo sapiens 12 BAC RP11-981P6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 106525

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 21    tttgctgctcagtttacattct 42
             ||||||||||||| ||||||||
Sbjct: 24863 tttgctgctcagtatacattct 24884

>emb|AL671961.7| Mouse DNA sequence from clone RP23-71F1 on chromosome X, complete
              sequence
          Length = 143564

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 26     tgctcagtttacattctt 43
              ||||||||||||||||||
Sbjct: 139134 tgctcagtttacattctt 139117

>emb|BX571702.7| Mouse DNA sequence from clone RP23-296G23 on chromosome X, complete
             sequence
          Length = 94596

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 26    tgctcagtttacattctt 43
             ||||||||||||||||||
Sbjct: 55270 tgctcagtttacattctt 55287

>emb|AL929013.9| Zebrafish DNA sequence from clone DKEY-77O15, complete sequence
          Length = 184257

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                  
Query: 7     taattgtgctgnaatttgctg 27
             ||||||||||| |||||||||
Sbjct: 84011 taattgtgctgtaatttgctg 84031


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 269,491
Number of Sequences: 3902068
Number of extensions: 269491
Number of successful extensions: 59865
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59831
Number of HSP's gapped (non-prelim): 34
length of query: 43
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 23
effective length of database: 17,155,003,908
effective search space: 394565089884
effective search space used: 394565089884
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)