| Clone Name | rbags1a20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF475108.1| Triticum aestivum acidic ribosomal protein mRNA, partial cds Length = 417 Score = 486 bits (245), Expect = e-134 Identities = 312/335 (93%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctc 216 |||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 417 ttagtcgaacagactgaaacccatgtcttcatcagattcttccttctcttcaaccttctc 358 Query: 217 ctccttctttgactcagcagcaggtgctgcggcaccaccagctgcagcagctggagctcc 276 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 357 ctccttctttgactcagcagcaggtgctgcgccaccaccagatgcagcagctggagctcc 298 Query: 277 cacagcaatggcacccccacctgaaggcacagcggcaaacttctcccttccagctgcaat 336 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 cacagcaatggcacccccacctgaaggcacagcggcaaacttctcccttccagatgcaat 238 Query: 337 cacttctgtgatgtccttacccttgagttcagcaagaaggaacttaagtttttcttcatc 396 |||||||||||||||||| || || ||||||||||||||||||| ||| ||||||||||| Sbjct: 237 cacttctgtgatgtccttgcctttcagttcagcaagaaggaactcaagcttttcttcatc 178 Query: 397 agcctcagccccaactgattccaggatgttcttgatgtcaccggcagtcggggaagagtt 456 ||||||||| |||||||| |||||||||||||||| ||| ||||| | ||||||||||| Sbjct: 177 agcctcagcaccaactgagtccaggatgttcttgacatcagcggcacttggggaagagtt 118 Query: 457 cccacccangtaggcgagcaggtaggcagngatca 491 |||||| | |||||||| |||||||||| ||||| Sbjct: 117 cccaccaagataggcgaggaggtaggcagcgatca 83
>gb|AY104933.1| Zea mays PCO102315 mRNA sequence Length = 711 Score = 244 bits (123), Expect = 3e-61 Identities = 252/295 (85%) Strand = Plus / Minus Query: 170 ctgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcctccttctttgac 229 ||||||||||| || |||||||| |||||||||||||||||||| || |||||||||| | Sbjct: 397 ctgaaacccatatcttcatcagactcttccttctcttcaaccttttcttccttctttgcc 338 Query: 230 tcagcagcaggtgctgcggcaccaccagctgcagcagctggagctcccacagcaatggca 289 || |||||||||||||| |||| |||||| |||| ||||||||||||| |||| ||| Sbjct: 337 tcttcagcaggtgctgcgccaccgccagctacagctgctggagctcccatgtcaattgca 278 Query: 290 cccccacctgaaggcacagcggcaaacttctcccttccagctgcaatcacttctgtgatg 349 || |||||||||||||||| || ||| | |||||||||||||||||||||||||| ||| Sbjct: 277 ccaccacctgaaggcacagaggataacctttcccttccagctgcaatcacttctgttatg 218 Query: 350 tccttacccttgagttcagcaagaaggaacttaagtttttcttcatcagcctcagcccca 409 ||||| | |||||||| | || ||||||| ||||||||||||||||| ||||| ||| Sbjct: 217 tccttgtctttgagttctgtgagcaggaactctagtttttcttcatcagcttcagcacca 158 Query: 410 actgattccaggatgttcttgatgtcaccggcagtcggggaagagttcccaccca 464 ||||||||||| ||| |||| | ||| | ||||||||||||| ||| ||||||| Sbjct: 157 actgattccagaatgctcttaacatcatcagcagtcggggaagtgtttccaccca 103
>gb|U62753.1|ZMU62753 Zea mays acidic ribosomal protein P2b (rpp2b) mRNA, complete cds Length = 600 Score = 244 bits (123), Expect = 3e-61 Identities = 252/295 (85%) Strand = Plus / Minus Query: 170 ctgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcctccttctttgac 229 ||||||||||| || |||||||| |||||||||||||||||||| || |||||||||| | Sbjct: 373 ctgaaacccatatcttcatcagactcttccttctcttcaaccttttcttccttctttgcc 314 Query: 230 tcagcagcaggtgctgcggcaccaccagctgcagcagctggagctcccacagcaatggca 289 || |||||||||||||| |||| |||||| |||| ||||||||||||| |||| ||| Sbjct: 313 tcttcagcaggtgctgcgccaccgccagctacagctgctggagctcccatgtcaattgca 254 Query: 290 cccccacctgaaggcacagcggcaaacttctcccttccagctgcaatcacttctgtgatg 349 || |||||||||||||||| || ||| | |||||||||||||||||||||||||| ||| Sbjct: 253 ccaccacctgaaggcacagaggataacctttcccttccagctgcaatcacttctgttatg 194 Query: 350 tccttacccttgagttcagcaagaaggaacttaagtttttcttcatcagcctcagcccca 409 ||||| | |||||||| | || ||||||| ||||||||||||||||| ||||| ||| Sbjct: 193 tccttgtctttgagttctgtgagcaggaactctagtttttcttcatcagcttcagcacca 134 Query: 410 actgattccaggatgttcttgatgtcaccggcagtcggggaagagttcccaccca 464 ||||||||||| ||| |||| | ||| | ||||||||||||| ||| ||||||| Sbjct: 133 actgattccagaatgctcttaacatcatcagcagtcggggaagtgtttccaccca 79
>dbj|AK121459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143J09, full insert sequence Length = 782 Score = 168 bits (85), Expect = 1e-38 Identities = 276/339 (81%), Gaps = 6/339 (1%) Strand = Plus / Minus Query: 156 cttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttct 215 |||||||||| | |||||||||||||| |||||||| |||||||||||||| ||||||| Sbjct: 424 cttagtcaaacaagctgaaacccatgtcatcatcagactcttccttctcttcgaccttct 365 Query: 216 cctccttctttgactcagcagcaggtgctgcggcaccaccagctgcagcagctggagctc 275 |||| ||||||| ||| ||||||||||| ||||| ||| ||||||| | |||||| Sbjct: 364 cctctttctttgcctcttcagcaggtgct---gcaccgccacctgcagctgtaggagctg 308 Query: 276 ccacagcaatg---gcacccccacctgaaggcacagcggcaaacttctcccttccagctg 332 ||||||| ||| |||| |||||||| ||||||| |||||||||||||||||||| | Sbjct: 307 ccacagctatgccaccaccaccacctgagggcacagaagcaaacttctcccttccagcag 248 Query: 333 caatcacttctgtgatgtccttacccttgagttcagcaagaaggaacttaagtttttctt 392 ||||||||||||| |||||||| |||| ||||| | || ||||||| || | || | Sbjct: 247 caatcacttctgttatgtccttgccctccagttctgagagcaggaactccagcctctcgt 188 Query: 393 catcagcctcagccccaactgattccaggatgttcttgatgtcaccggcagtcggggaag 452 ||| ||| ||| | |||||||||||||| |||||||| |||||| | |||| || || | Sbjct: 187 cattagcttcaacgccaactgattccagaatgttcttaatgtcatcagcagatggagagg 128 Query: 453 agttcccacccangtaggcgagcaggtaggcagngatca 491 ||| ||||||| |||||||||||||||| ||||| Sbjct: 127 tgtttccacccagaacagcgagcaggtaggcagcgatca 89
>dbj|AK058730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-F09, full insert sequence Length = 460 Score = 157 bits (79), Expect = 5e-35 Identities = 176/207 (85%), Gaps = 6/207 (2%) Strand = Plus / Minus Query: 156 cttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttct 215 |||||||||| | |||||||||||||| |||||||| |||||||||||||| ||||||| Sbjct: 231 cttagtcaaacaagctgaaacccatgtcatcatcagactcttccttctcttcgaccttct 172 Query: 216 cctccttctttgactcagcagcaggtgctgcggcaccaccagctgcagcagctggagctc 275 |||| ||||||| ||| ||||||||||| ||||| ||| ||||||| | |||||| Sbjct: 171 cctctttctttgcctcttcagcaggtgct---gcaccgccacctgcagctgtaggagctg 115 Query: 276 ccacagcaatg---gcacccccacctgaaggcacagcggcaaacttctcccttccagctg 332 ||||||| ||| |||| |||||||| ||||||| |||||||||||||||||||| | Sbjct: 114 ccacagctatgccaccaccaccacctgagggcacagaagcaaacttctcccttccagcag 55 Query: 333 caatcacttctgtgatgtccttaccct 359 ||||||||||||| |||||||| |||| Sbjct: 54 caatcacttctgttatgtccttgccct 28
>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12, complete sequence Length = 155402 Score = 131 bits (66), Expect = 3e-27 Identities = 151/178 (84%), Gaps = 6/178 (3%) Strand = Plus / Minus Query: 185 tcatcagattcttccttctcttcaaccttctcctccttctttgactcagcagcaggtgct 244 |||||||| |||||||||||||| ||||||||||| ||||||| ||| ||||||||||| Sbjct: 82940 tcatcagactcttccttctcttcgaccttctcctctttctttgcctcttcagcaggtgct 82881 Query: 245 gcggcaccaccagctgcagcagctggagctcccacagcaatggcacccccacc---tgaa 301 || ||| ||| ||||||| | |||||| ||||||| ||| |||| ||||| ||| Sbjct: 82880 gc---accgccacctgcagctgtaggagctgccacagctatgccaccaccaccacctgag 82824 Query: 302 ggcacagcggcaaacttctcccttccagctgcaatcacttctgtgatgtccttaccct 359 ||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 82823 ggcacagaagcaaacttctcccttccagcagcaatcacttctgttatgtccttgccct 82766
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 131 bits (66), Expect = 3e-27 Identities = 151/178 (84%), Gaps = 6/178 (3%) Strand = Plus / Minus Query: 185 tcatcagattcttccttctcttcaaccttctcctccttctttgactcagcagcaggtgct 244 |||||||| |||||||||||||| ||||||||||| ||||||| ||| ||||||||||| Sbjct: 21691764 tcatcagactcttccttctcttcgaccttctcctctttctttgcctcttcagcaggtgct 21691705 Query: 245 gcggcaccaccagctgcagcagctggagctcccacagcaatggcacccccacc---tgaa 301 || ||| ||| ||||||| | |||||| ||||||| ||| |||| ||||| ||| Sbjct: 21691704 gc---accgccacctgcagctgtaggagctgccacagctatgccaccaccaccacctgag 21691648 Query: 302 ggcacagcggcaaacttctcccttccagctgcaatcacttctgtgatgtccttaccct 359 ||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 21691647 ggcacagaagcaaacttctcccttccagcagcaatcacttctgttatgtccttgccct 21691590
>dbj|D21114.1|RICYK132 Oryza sativa mRNA for ribosomal protein A2, partial sequence Length = 344 Score = 99.6 bits (50), Expect = 9e-18 Identities = 165/204 (80%) Strand = Plus / Minus Query: 288 cacccccacctgaaggcacagcggcaaacttctcccttccagctgcaatcacttctgtga 347 |||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||| | Sbjct: 268 caccaccacctgagggcacagaagcaaacttctcccttccagcagcaatcacttctgtta 209 Query: 348 tgtccttacccttgagttcagcaagaaggaacttaagtttttcttcatcagcctcagccc 407 ||||||| |||| ||||| | || ||||||| || | || |||| ||| ||| | | Sbjct: 208 tgtccttgccctccagttctgagagcaggaactccagcctctcgtcattagcttcaacgc 149 Query: 408 caactgattccaggatgttcttgatgtcaccggcagtcggggaagagttcccacccangt 467 ||||||||||||| |||||||| |||||| | |||| || || | ||| ||||||| Sbjct: 148 caactgattccagaatgttcttaatgtcatcagcagatggagaggtgtttccacccagaa 89 Query: 468 aggcgagcaggtaggcagngatca 491 |||||||||||||||| ||||| Sbjct: 88 cagcgagcaggtaggcagcgatca 65
>gb|AY389705.1| Hyacinthus orientalis 60S acidic ribosomal protein mRNA, complete cds Length = 587 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 159 agtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcct 218 ||||||| |||||||||||||| || ||||| ||||||||||||||||||||||| || | Sbjct: 389 agtcaaacagactgaaacccatatcttcatcggattcttccttctcttcaaccttttctt 330 Query: 219 ccttctttg 227 ||||||||| Sbjct: 329 ccttctttg 321
>gb|AY389567.1| Hyacinthus orientalis acidic ribosomal protein mRNA, complete cds Length = 644 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 159 agtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcct 218 ||||||| |||||||||||||| || ||||| ||||||||||||||||||||||| || | Sbjct: 407 agtcaaacagactgaaacccatatcttcatcggattcttccttctcttcaaccttttctt 348 Query: 219 ccttctttg 227 ||||||||| Sbjct: 347 ccttctttg 339 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 395 tcagcctcagccccaactgattccaggatgttcttgat 432 ||||||||||||||||||||| ||| ||| | |||||| Sbjct: 168 tcagcctcagccccaactgatcccaagatatccttgat 131
>gb|AY087501.1| Arabidopsis thaliana clone 36076 mRNA, complete sequence Length = 561 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttc 214 ||||| || |||||||||||||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 423 gcttactcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttc 364 Query: 215 tcctccttctttgactcagcagcagg 240 || || ||||| |||||||||||||| Sbjct: 363 tcttctttcttggactcagcagcagg 338
>ref|NM_201820.1| Arabidopsis thaliana structural constituent of ribosome AT2G27710 transcript variant AT2G27710.3 mRNA, complete cds Length = 683 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttc 214 ||||| || |||||||||||||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 488 gcttactcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttc 429 Query: 215 tcctccttctttgactcagcagcag 239 || || ||||| ||||||||||||| Sbjct: 428 tcttctttcttggactcagcagcag 404 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 aacttctcccttccagctgcaatca 338 ||||||||||||||||| ||||||| Sbjct: 323 aacttctcccttccagcagcaatca 299
>ref|NM_179775.1| Arabidopsis thaliana structural constituent of ribosome AT2G27710 transcript variant AT2G27710.2 mRNA, complete cds Length = 613 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttc 214 ||||| || |||||||||||||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 418 gcttactcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttc 359 Query: 215 tcctccttctttgactcagcagcag 239 || || ||||| ||||||||||||| Sbjct: 358 tcttctttcttggactcagcagcag 334 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 aacttctcccttccagctgcaatca 338 ||||||||||||||||| ||||||| Sbjct: 253 aacttctcccttccagcagcaatca 229
>ref|NM_128330.2| Arabidopsis thaliana structural constituent of ribosome AT2G27710 transcript variant AT2G27710.1 mRNA, complete cds Length = 617 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttc 214 ||||| || |||||||||||||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 422 gcttactcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttc 363 Query: 215 tcctccttctttgactcagcagcag 239 || || ||||| ||||||||||||| Sbjct: 362 tcttctttcttggactcagcagcag 338 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 aacttctcccttccagctgcaatca 338 ||||||||||||||||| ||||||| Sbjct: 257 aacttctcccttccagcagcaatca 233
>gb|AY062854.1| Arabidopsis thaliana 60S acidic ribosomal protein P2 (At2g27710; F15K20.19) mRNA, complete cds Length = 565 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttc 214 ||||| || |||||||||||||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 421 gcttactcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttc 362 Query: 215 tcctccttctttgactcagcagcag 239 || || ||||| ||||||||||||| Sbjct: 361 tcttctttcttggactcagcagcag 337 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 aacttctcccttccagctgcaatca 338 ||||||||||||||||| ||||||| Sbjct: 256 aacttctcccttccagcagcaatca 232
>gb|AF428429.1|AF428429 Arabidopsis thaliana At2g27710/F15K20.19 mRNA, complete cds Length = 583 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttc 214 ||||| || |||||||||||||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 418 gcttactcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttc 359 Query: 215 tcctccttctttgactcagcagcag 239 || || ||||| ||||||||||||| Sbjct: 358 tcttctttcttggactcagcagcag 334 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 aacttctcccttccagctgcaatca 338 ||||||||||||||||| ||||||| Sbjct: 253 aacttctcccttccagcagcaatca 229
>emb|BX820171.1|CNS0AA6T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZH02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 548 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttc 214 ||||| || |||||||||||||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 402 gcttactcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttc 343 Query: 215 tcctccttctttgactcagcagcag 239 || || ||||| ||||||||||||| Sbjct: 342 tcttctttcttggactcagcagcag 318 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 aacttctcccttccagctgcaatca 338 ||||||||||||||||| ||||||| Sbjct: 237 aacttctcccttccagcagcaatca 213
>emb|BX821707.1|CNS0A88S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZE10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttc 214 ||||| || |||||||||||||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 488 gcttactcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttc 429 Query: 215 tcctccttctttgactcagcagcag 239 || || ||||| ||||||||||||| Sbjct: 428 tcttctttcttggactcagcagcag 404 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 aacttctcccttccagctgcaatca 338 ||||||||||||||||| ||||||| Sbjct: 323 aacttctcccttccagcagcaatca 299
>emb|BX841989.1|CNS09Y9W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 536 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttc 214 ||||| || |||||||||||||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 395 gcttactcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttc 336 Query: 215 tcctccttctttgactcagcagcag 239 || || ||||| ||||||||||||| Sbjct: 335 tcttctttcttggactcagcagcag 311 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 aacttctcccttccagctgcaatca 338 ||||||||||||||||| ||||||| Sbjct: 230 aacttctcccttccagcagcaatca 206
>gb|BT006518.1| Arabidopsis thaliana At2g27710 gene, complete cds Length = 348 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 164 aatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcctccttc 223 |||||||||||||||||||| ||||| ||||||||||| ||||| |||||| || ||| Sbjct: 341 aatagactgaaacccatgtcatcatcggattcttccttttcttccttcttctcttctttc 282 Query: 224 tttgactcagcagcag 239 || ||||||||||||| Sbjct: 281 ttggactcagcagcag 266 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 314 aacttctcccttccagctgcaatca 338 ||||||||||||||||| ||||||| Sbjct: 185 aacttctcccttccagcagcaatca 161
>gb|DQ099091.1| Arachis stenosperma clone AS1RN16F05 microsatellite sequence Length = 461 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 156 cttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttct 215 |||| ||||| |||||||| ||||| || ||||| ||||| ||||||||||| ||||||| Sbjct: 408 cttaatcaaagagactgaatcccatatcatcatccgattcctccttctcttcgaccttct 349 Query: 216 cctccttct 224 ||||||||| Sbjct: 348 cctccttct 340
>ref|NM_128331.3| Arabidopsis thaliana structural constituent of ribosome AT2G27720 mRNA, complete cds Length = 672 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 169 actgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcctccttctttga 228 ||||||||||||||| ||||| |||||||| |||||||| |||||| || ||||| || Sbjct: 452 actgaaacccatgtcatcatcggattcttctttctcttctttcttctcttctttcttgga 393 Query: 229 ctcagcagcagg 240 |||||||||||| Sbjct: 392 ctcagcagcagg 381
>gb|AY093717.1| Arabidopsis thaliana At2g27720/F15K20.18 mRNA, complete cds Length = 348 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 169 actgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcctccttctttga 228 ||||||||||||||| ||||| |||||||| |||||||| |||||| || ||||| || Sbjct: 336 actgaaacccatgtcatcatcggattcttctttctcttctttcttctcttctttcttgga 277 Query: 229 ctcagcagcagg 240 |||||||||||| Sbjct: 276 ctcagcagcagg 265
>gb|AF410295.1|AF410295 Arabidopsis thaliana At2g27720/F15K20.18 mRNA, complete cds Length = 542 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 169 actgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcctccttctttga 228 ||||||||||||||| ||||| |||||||| |||||||| |||||| || ||||| || Sbjct: 409 actgaaacccatgtcatcatcggattcttctttctcttctttcttctcttctttcttgga 350 Query: 229 ctcagcagcagg 240 |||||||||||| Sbjct: 349 ctcagcagcagg 338
>emb|BX821300.1|CNS0A8EB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL32ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 585 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 169 actgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcctccttctttga 228 ||||||||||||||| ||||| |||||||| |||||||| |||||| || ||||| || Sbjct: 398 actgaaacccatgtcatcatcggattcttctttctcttctttcttctcttctttcttgga 339 Query: 229 ctcagcagcagg 240 |||||||||||| Sbjct: 338 ctcagcagcagg 327
>emb|BX822066.1|CNS0A897 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL9ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 614 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 169 actgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcctccttctttga 228 ||||||||||||||| ||||| |||||||| |||||||| |||||| || ||||| || Sbjct: 394 actgaaacccatgtcatcatcggattcttctttctcttctttcttctcttctttcttgga 335 Query: 229 ctcagcagcagg 240 |||||||||||| Sbjct: 334 ctcagcagcagg 323
>gb|AY085945.1| Arabidopsis thaliana clone 19986 mRNA, complete sequence Length = 621 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 169 actgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcctccttctttga 228 ||||||||||||||| ||||| |||||||| |||||||| |||||| || ||||| || Sbjct: 452 actgaaacccatgtcatcatcggattcttctttctcttctttcttctcttctttcttgga 393 Query: 229 ctcagcagcagg 240 |||||||||||| Sbjct: 392 ctcagcagcagg 381
>gb|DQ191633.1| Solanum tuberosum 60s acidic ribosomal protein-like protein mRNA, complete cds Length = 579 Score = 69.9 bits (35), Expect = 8e-09 Identities = 79/93 (84%), Gaps = 3/93 (3%) Strand = Plus / Minus Query: 167 agactgaaacccatgtcgtcatcagattcttccttctcttcaaccttc---tcctccttc 223 |||||||| |||||||||||||||||||| || |||||||| |||||| ||| | ||| Sbjct: 382 agactgaagcccatgtcgtcatcagattcctctttctcttccaccttcttttccactttc 323 Query: 224 tttgactcagcagcaggtgctgcggcaccacca 256 || ||||||||| |||||||| ||||||||| Sbjct: 322 ttctcctcagcagctggtgctgcagcaccacca 290 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 314 aacttctcccttccagctgcaatcacttctgtgatgtccttacccttga 362 ||||||||||| ||||| ||||||| || ||||||||||| ||||||| Sbjct: 229 aacttctccctgccagcagcaatcagctcagtgatgtccttgcccttga 181
>gb|AF475123.1| Triticum aestivum acidic ribosomal protein P2a-2 mRNA, partial cds Length = 339 Score = 69.9 bits (35), Expect = 8e-09 Identities = 89/107 (83%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctc 216 |||||| || |||||||| |||||||| |||||| ||||||||||| | |||||||| Sbjct: 339 ttagtcgaacagactgaagcccatgtcatcatcactctcttccttctccacgaccttctc 280 Query: 217 ctccttctttgactcagcagcaggtgctgcggcaccaccagctgcag 263 || |||||||||||||| ||||| || || ||||| ||||| |||| Sbjct: 279 ttctttctttgactcagctgcaggggcagcagcacctccagcagcag 233
>gb|AF475097.1| Triticum aestivum acidic ribosomal protein P2 mRNA, partial cds Length = 339 Score = 69.9 bits (35), Expect = 8e-09 Identities = 89/107 (83%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctc 216 |||||| || |||||||| |||||||| |||||| ||||||||||| | |||||||| Sbjct: 339 ttagtcgaacagactgaagcccatgtcatcatcactctcttccttctccacgaccttctc 280 Query: 217 ctccttctttgactcagcagcaggtgctgcggcaccaccagctgcag 263 || |||||||||||||| ||||| || || ||||| ||||| |||| Sbjct: 279 ttctttctttgactcagctgcaggggcagcagcacctccagcagcag 233
>ref|XM_455436.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F07865g predicted mRNA Length = 321 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 164 aatagactgaaacccatgtcgtcatcagattcttcctt 201 ||||||| |||||||||||||||||||||||||||||| Sbjct: 314 aatagaccgaaacccatgtcgtcatcagattcttcctt 277
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 164 aatagactgaaacccatgtcgtcatcagattcttcctt 201 ||||||| |||||||||||||||||||||||||||||| Sbjct: 741410 aatagaccgaaacccatgtcgtcatcagattcttcctt 741373 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttcctt 201 |||||||||||| || |||||||||||||| Sbjct: 545296 gaaacccatgtcatcgtcagattcttcctt 545267
>gb|AY081851.1| Prunus dulcis 60s acidic ribosomal protein (AL60SRP) mRNA, complete cds Length = 604 Score = 67.9 bits (34), Expect = 3e-08 Identities = 164/206 (79%), Gaps = 6/206 (2%) Strand = Plus / Minus Query: 158 tagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcc 217 |||||||| |||||||| ||||| || ||||| | || || ||||| ||||||||||| Sbjct: 381 tagtcaaagagactgaagcccatatcatcatcggtatcctctttctcctcaaccttctct 322 Query: 218 tccttctttgactca---gcagcaggtgctgcggcaccaccagctgcagcagctggagct 274 || ||||||| |||| |||||||| || ||||||||| || | ||| ||| || || Sbjct: 321 tctttctttggctcagctgcagcaggagcagcggcaccagcaccagcaccaggtgcag-- 264 Query: 275 cccacagcaatggcacccccacctgaaggcacagcggcaaacttctcccttccagctgca 334 |||| |||| ||||| ||||| || || |||| ||| |||||||||||||||| ||| Sbjct: 263 -ccactgcaacagcaccaccaccagatggtacagaggccaacttctcccttccagaagca 205 Query: 335 atcacttctgtgatgtccttaccctt 360 || | ||||| |||||||||||||| Sbjct: 204 ataagctctgtaatgtccttaccctt 179
>emb|AJ276758.1|ATH276758 Arabidopsis thaliana partial mRNA, clone DiDi 17T-5a Length = 233 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttc 207 ||||| || |||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 82 gcttactcgaatagactgaaacccatgtcatcatcggattcttccttttcttc 30
>gb|U62750.1|ZMU62750 Zea mays acidic ribosomal protein P2a-4 (rpp2a-4) mRNA, partial cds Length = 497 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 156 cttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttct 215 ||||||| || || ||||| ||||||||||||||| |||||||||||| || ||||||| Sbjct: 290 cttagtcgaagaggctgaagcccatgtcgtcatcactttcttccttctcctccaccttct 231 Query: 216 cctccttctttgactcagcagcagg 240 | || ||||| | |||||| ||||| Sbjct: 230 cttctttcttcgcctcagctgcagg 206
>emb|AJ278460.1|JRE278460 Juglans regia mRNA for 60S ribosomal protein (rib 60S) Length = 686 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 316 cttctcccttccagctgcaatcacttctgtgatgtccttacccttgagttcag 368 ||||||||||||||||||||||| ||||||||| || || ||||||| ||||| Sbjct: 272 cttctcccttccagctgcaatcagttctgtgatatcttttcccttgacttcag 220 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 156 cttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttct 215 ||||||||||||| || |||||||| || || || || || || |||||||| || |||| Sbjct: 432 cttagtcaaataggctaaaacccatatcatcgtcggactcctctttctcttccactttct 373 Query: 216 cctccttctttgactcagcagcag 239 |||| ||||||| |||||| |||| Sbjct: 372 cctctttctttggctcagctgcag 349
>ref|XM_466076.1| Oryza sativa (japonica cultivar-group), mRNA Length = 673 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 158 tagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcc 217 |||||||| | |||||| |||||||| |||||||||||||| ||||| || |||||||| Sbjct: 451 tagtcaaacaaactgaagcccatgtcatcatcagattcttctttctcctccaccttctct 392 Query: 218 tccttctt 225 || ||||| Sbjct: 391 tctttctt 384
>dbj|AK120980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042A15, full insert sequence Length = 672 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 158 tagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcc 217 |||||||| | |||||| |||||||| |||||||||||||| ||||| || |||||||| Sbjct: 450 tagtcaaacaaactgaagcccatgtcatcatcagattcttctttctcctccaccttctct 391 Query: 218 tccttctt 225 || ||||| Sbjct: 390 tctttctt 383
>ref|NM_189662.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 408 Score = 60.0 bits (30), Expect = 8e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 159 agtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcct 218 ||||||| | |||||| |||||||| |||||| ||||||||||||||| ||||| || | Sbjct: 406 agtcaaacaaactgaagcccatgtcatcatcactttcttccttctcttcgaccttatctt 347 Query: 219 ccttctttgactcagcagcagg 240 | ||||| | |||||| ||||| Sbjct: 346 ctttcttcgcctcagctgcagg 325
>dbj|AK058815.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-F04, full insert sequence Length = 693 Score = 60.0 bits (30), Expect = 8e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 159 agtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcct 218 ||||||| | |||||| |||||||| |||||| ||||||||||||||| ||||| || | Sbjct: 433 agtcaaacaaactgaagcccatgtcatcatcactttcttccttctcttcgaccttatctt 374 Query: 219 ccttctttgactcagcagcagg 240 | ||||| | |||||| ||||| Sbjct: 373 ctttcttcgcctcagctgcagg 352
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 156 cttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttct 215 ||||||| || |||| ||| |||||||| ||||| || || |||||||| |||||||||| Sbjct: 2788392 cttagtcgaagagaccgaagcccatgtcatcatcggactcctccttctcctcaaccttct 2788333 Query: 216 cctcct 221 |||||| Sbjct: 2788332 cctcct 2788327 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctc 204 ||||||||||| |||| ||| |||||||||||||| || || |||||||| Sbjct: 1720101 gcttagtcaaagagaccgaagcccatgtcgtcatcggactcgtccttctc 1720052
>ref|XM_501173.1| Yarrowia lipolytica CLIB122, YALI0B21252g predicted mRNA Length = 324 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctc 216 |||||| || |||| ||| |||||||| ||||| || || |||||||| ||||||||||| Sbjct: 324 ttagtcgaagagaccgaagcccatgtcatcatcggactcctccttctcctcaaccttctc 265 Query: 217 ctcct 221 ||||| Sbjct: 264 ctcct 260
>ref|XM_571764.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 1065 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttc 207 |||||||| || |||| ||| ||||||||||| ||||| |||||||||||||| Sbjct: 983 gcttagtcgaagagaccgaagcccatgtcgtcgtcagactcttccttctcttc 931
>gb|AF089867.1|AF089867 Penaeus monodon clottable protein mRNA, complete cds Length = 6124 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 167 agactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcctccttcttt 226 |||||||| |||||||||||||||||||| || |||||| ||||||| |||||||| Sbjct: 41 agactgaagcccatgtcgtcatcagattcctcagcctcttcttccttctcttccttcttg 100 Query: 227 gactcagcagcaggtgc 243 | || ||||||||||| Sbjct: 101 gcttcggcagcaggtgc 117
>ref|XM_454074.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E02794g predicted mRNA Length = 330 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 164 aatagactgaaacccatgtcgtcatcagattcttccttctcttc 207 ||||||| |||||||||||| || |||||||||||||| ||||| Sbjct: 323 aatagaccgaaacccatgtcatcgtcagattcttccttttcttc 280
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 164 aatagactgaaacccatgtcgtcatcagattcttccttctcttc 207 ||||||| |||||||||||| || |||||||||||||| ||||| Sbjct: 263967 aatagaccgaaacccatgtcatcgtcagattcttccttttcttc 263924 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 gaaacccatgtcgtcatcagattcttcctt 201 |||||||||||| ||||| ||||||||||| Sbjct: 1967330 gaaacccatgtcatcatcggattcttcctt 1967359
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 154 tgcttagtcaaatagactgaaacccatgtcgtcatcagattcttcctt 201 ||||||||| || | || |||||||||||||||||| ||||||||||| Sbjct: 60162 tgcttagtcgaacaaaccgaaacccatgtcgtcatcggattcttcctt 60209
>emb|X86553.1|ZMRNARPP2 Z.mays mRNA for 60S acidic ribosomal protein Length = 544 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 193 ttcttccttctcttcaaccttctcctccttctttgactcagcagcagg 240 ||||||||||||||| |||||||| || ||||||| |||||| ||||| Sbjct: 345 ttcttccttctcttccaccttctcttctttctttgcctcagctgcagg 298
>gb|U29383.1|ZMU29383 Zea mays acidic ribosomal protein P2 (RPA-2A1) mRNA, complete cds Length = 601 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 193 ttcttccttctcttcaaccttctcctccttctttgactcagcagcagg 240 ||||||||||||||| |||||||| || ||||||| |||||| ||||| Sbjct: 358 ttcttccttctcttccaccttctcttctttctttgcctcagctgcagg 311
>ref|XM_451800.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B05918g predicted mRNA Length = 936 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 921 gaaacccatgtcgtcatcagattcttc 895
>ref|XM_451799.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B05907g predicted mRNA Length = 930 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 52 gaaacccatgtcgtcatcagattcttc 78
>ref|XM_883637.1| Candida albicans SC5314 hypothetical protein (CaJ7.0118) partial mRNA Length = 939 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 924 gaaacccatgtcgtcatcagattcttc 898
>ref|XM_883904.1| Candida albicans SC5314 hypothetical protein (CaJ7.0449) partial mRNA Length = 327 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 312 gaaacccatgtcgtcatcagattcttc 286
>ref|XM_715216.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P0 (RPP0) partial mRNA Length = 939 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 924 gaaacccatgtcgtcatcagattcttc 898
>ref|XM_710144.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P1B (RPP1B) partial mRNA Length = 327 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 312 gaaacccatgtcgtcatcagattcttc 286
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 533086 gaaacccatgtcgtcatcagattcttc 533112
>gb|M26506.1|YSCL10F Saccharomyces cerevisiae L10e protein gene, complete cds Length = 1720 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 1567 gaaacccatgtcgtcatcagattcttc 1541
>gb|AF317660.1|AF317660 Candida albicans 60S acidic ribosomal protein type P1-B (p1B) gene, complete cds Length = 441 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 319 gaaacccatgtcgtcatcagattcttc 293
>gb|AY103566.1| Zea mays PCO075293 mRNA sequence Length = 812 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 193 ttcttccttctcttcaaccttctcctccttctttgactcagcagcag 239 ||||||||||||||| |||||||| || ||||||| |||||| |||| Sbjct: 464 ttcttccttctcttccaccttctcttctttctttgcctcagctgcag 418
>emb|X13328.1|SCRIBPA0 S.cerevisiae gene for ribosomal protein A0 Length = 1614 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 1441 gaaacccatgtcgtcatcagattcttc 1415
>emb|X06959.1|SCRPA0 Yeast mRNA for acidic ribosomal protein A0 Length = 1083 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 986 gaaacccatgtcgtcatcagattcttc 960
>emb|X06958.1|SCRPA2 Yeast mRNA for ribosomal protein A2 Length = 538 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 156 cttagtcaaatagactgaaacccatgtcgtcatcagattcttc 198 ||||||| |||| || ||||||||||||||| ||||||||||| Sbjct: 344 cttagtcgaataaaccgaaacccatgtcgtcgtcagattcttc 302
>emb|Z74781.1|SCYOL039W S.cerevisiae chromosome XV reading frame ORF YOL039w Length = 1759 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 156 cttagtcaaatagactgaaacccatgtcgtcatcagattcttc 198 ||||||| |||| || ||||||||||||||| ||||||||||| Sbjct: 1041 cttagtcgaataaaccgaaacccatgtcgtcgtcagattcttc 999
>gb|U19028.1|YSCL8300 Saccharomyces cerevisiae chromosome XII cosmid 8300 Length = 37541 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 14294 gaaacccatgtcgtcatcagattcttc 14268
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 861468 gaaacccatgtcgtcatcagattcttc 861494 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 212725 gaaacccatgtcgtcatcagattcttc 212699
>gb|J03760.1|YSCRGAP44 Yeast (S.cerevisiae) ribosomal protein L44 gene, complete cds Length = 891 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 156 cttagtcaaatagactgaaacccatgtcgtcatcagattcttc 198 ||||||| |||| || ||||||||||||||| ||||||||||| Sbjct: 749 cttagtcgaataaaccgaaacccatgtcgtcgtcagattcttc 707
>gb|M26503.1|YSCL12IB S.cerevisiae L12eIB protein gene, complete cds Length = 1080 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 156 cttagtcaaatagactgaaacccatgtcgtcatcagattcttc 198 ||||||| |||| || ||||||||||||||| ||||||||||| Sbjct: 800 cttagtcgaataaaccgaaacccatgtcgtcgtcagattcttc 758
>gb|M37326.1|YSCL10E S.cerevisiae ribosomal protein L10e gene, complete cds Length = 1720 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 1567 gaaacccatgtcgtcatcagattcttc 1541
>dbj|D00529.1|YSCARPA0 Saccharomyces cerevisiae gene for acidic ribosomal protein A0, complete cds Length = 1641 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 ||||||||||||||||||||||||||| Sbjct: 1468 gaaacccatgtcgtcatcagattcttc 1442
>gb|AY692793.1| Saccharomyces cerevisiae clone FLH115078.01X YOL039W gene, complete cds Length = 321 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttc 198 |||||| |||| || ||||||||||||||| ||||||||||| Sbjct: 321 ttagtcgaataaaccgaaacccatgtcgtcgtcagattcttc 280
>gb|AY558526.1| Saccharomyces cerevisiae clone FLH110960.01X YDL081C gene, complete cds Length = 321 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 161 tcaaatagactgaaacccatgtcgtcatcagattcttc 198 ||||||| || |||||||||||||||||| |||||||| Sbjct: 317 tcaaataaaccgaaacccatgtcgtcatcggattcttc 280
>ref|XM_447289.1| Candida glabrata CBS138 hypothetical protein (CAGL0I00814g) partial mRNA Length = 324 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttcctt 201 |||||||||||||||||| ||||||||||| Sbjct: 309 gaaacccatgtcgtcatcggattcttcctt 280
>emb|AL116172.1|CNS01CZ8 Botrytis cinerea strain T4 cDNA library Length = 516 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 154 tgcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaacctt 213 |||||| || || |||| |||||||||||| || || || ||||||||||| ||| |||| Sbjct: 385 tgcttaatcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcctcagcctt 326 Query: 214 ctcctc 219 |||||| Sbjct: 325 ctcctc 320
>emb|AL115473.1|CNS01CFT Botrytis cinerea strain T4 cDNA library Length = 554 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 154 tgcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaacctt 213 |||||| || || |||| |||||||||||| || || || ||||||||||| ||| |||| Sbjct: 370 tgcttaatcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcctcagcctt 311 Query: 214 ctcctc 219 |||||| Sbjct: 310 ctcctc 305
>emb|AL115427.1|CNS01CEJ Botrytis cinerea strain T4 cDNA library Length = 420 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 154 tgcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaacctt 213 |||||| || || |||| |||||||||||| || || || ||||||||||| ||| |||| Sbjct: 279 tgcttaatcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcctcagcctt 220 Query: 214 ctcctc 219 |||||| Sbjct: 219 ctcctc 214
>emb|AL115241.1|CNS01C9D Botrytis cinerea strain T4 cDNA library Length = 600 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 154 tgcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaacctt 213 |||||| || || |||| |||||||||||| || || || ||||||||||| ||| |||| Sbjct: 424 tgcttaatcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcctcagcctt 365 Query: 214 ctcctc 219 |||||| Sbjct: 364 ctcctc 359
>emb|AL113803.1|CNS01B5F Botrytis cinerea strain T4 cDNA library Length = 540 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 154 tgcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaacctt 213 |||||| || || |||| |||||||||||| || || || ||||||||||| ||| |||| Sbjct: 384 tgcttaatcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcctcagcctt 325 Query: 214 ctcctc 219 |||||| Sbjct: 324 ctcctc 319
>emb|AL113787.1|CNS01B4Z Botrytis cinerea strain T4 cDNA library Length = 540 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 154 tgcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaacctt 213 |||||| || || |||| |||||||||||| || || || ||||||||||| ||| |||| Sbjct: 361 tgcttaatcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcctcagcctt 302 Query: 214 ctcctc 219 |||||| Sbjct: 301 ctcctc 296
>emb|AL112414.1|CNS01A2U Botrytis cinerea strain T4 cDNA library Length = 516 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 154 tgcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaacctt 213 |||||| || || |||| |||||||||||| || || || ||||||||||| ||| |||| Sbjct: 387 tgcttaatcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcctcagcctt 328 Query: 214 ctcctc 219 |||||| Sbjct: 327 ctcctc 322
>emb|AL111591.1|CNS019FZ Botrytis cinerea strain T4 cDNA library Length = 540 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 154 tgcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaacctt 213 |||||| || || |||| |||||||||||| || || || ||||||||||| ||| |||| Sbjct: 374 tgcttaatcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcctcagcctt 315 Query: 214 ctcctc 219 |||||| Sbjct: 314 ctcctc 309
>emb|AL111709.1|CNS019J9 Botrytis cinerea strain T4 cDNA library Length = 540 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 154 tgcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaacctt 213 |||||| || || |||| |||||||||||| || || || ||||||||||| ||| |||| Sbjct: 383 tgcttaatcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcctcagcctt 324 Query: 214 ctcctc 219 |||||| Sbjct: 323 ctcctc 318
>emb|AL110770.1|CNS018T7 Botrytis cinerea strain T4 cDNA library Length = 420 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 154 tgcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaacctt 213 |||||| || || |||| |||||||||||| || || || ||||||||||| ||| |||| Sbjct: 256 tgcttaatcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcctcagcctt 197 Query: 214 ctcctc 219 |||||| Sbjct: 196 ctcctc 191
>emb|AL110713.1|CNS018RM Botrytis cinerea strain T4 cDNA library Length = 600 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 154 tgcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaacctt 213 |||||| || || |||| |||||||||||| || || || ||||||||||| ||| |||| Sbjct: 427 tgcttaatcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcctcagcctt 368 Query: 214 ctcctc 219 |||||| Sbjct: 367 ctcctc 362
>gb|U62748.1|ZMU62748 Zea mays acidic ribosomal protein P2a-2 (rpp2a-2) mRNA, complete cds Length = 625 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 193 ttcttccttctcttcaaccttctcctccttctttgactcagc 234 ||||||||||||||| |||||||| || ||||||| |||||| Sbjct: 355 ttcttccttctcttccaccttctcttctttctttgcctcagc 314
>emb|Z74178.1|SCYDL130W S.cerevisiae chromosome IV reading frame ORF YDL130w Length = 2308 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttc 198 |||||| |||| || ||||||||||||||| ||||||||||| Sbjct: 1812 ttagtcgaataaaccgaaacccatgtcgtcgtcagattcttc 1771
>emb|Z74129.1|SCYDL081C S.cerevisiae chromosome IV reading frame ORF YDL081c Length = 1253 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 161 tcaaatagactgaaacccatgtcgtcatcagattcttc 198 ||||||| || |||||||||||||||||| |||||||| Sbjct: 418 tcaaataaaccgaaacccatgtcgtcatcggattcttc 455
>emb|X06957.1|SCRPA1 Yeast mRNA for acidic ribosomal protein A1 Length = 465 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 161 tcaaatagactgaaacccatgtcgtcatcagattcttc 198 ||||||| || |||||||||||||||||| |||||||| Sbjct: 353 tcaaataaaccgaaacccatgtcgtcatcggattcttc 316
>emb|X13682.1|SCARPA1 S.cerevisiae gene for acidic ribosomal protein A1 Length = 1162 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 161 tcaaatagactgaaacccatgtcgtcatcagattcttc 198 ||||||| || |||||||||||||||||| |||||||| Sbjct: 910 tcaaataaaccgaaacccatgtcgtcatcggattcttc 873
>gb|L46848.1|SOYARPP Glycine max acidic ribosomal protein P0 mRNA, complete cds Length = 1247 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttc 198 ||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 1090 ttagtcaaacagactgaaacccatgtcatcgtcagactcttc 1049
>gb|M19238.1|YSCRGAP46 Yeast (S.cerevisiae) ribosomal protein L44' gene, complete cds Length = 1226 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttc 198 |||||| |||| || ||||||||||||||| ||||||||||| Sbjct: 1039 ttagtcgaataaaccgaaacccatgtcgtcgtcagattcttc 998
>gb|M26507.1|YSCL12EIIB S.cerevisiae L12eIIB gene, complete cds Length = 1971 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttc 198 |||||| |||| || ||||||||||||||| ||||||||||| Sbjct: 1695 ttagtcgaataaaccgaaacccatgtcgtcgtcagattcttc 1654
>gb|M26504.1|YSCL12EIIA S.cerevisiae L12eIIA protein gene, complete cds Length = 988 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 161 tcaaatagactgaaacccatgtcgtcatcagattcttc 198 ||||||| || |||||||||||||||||| |||||||| Sbjct: 791 tcaaataaaccgaaacccatgtcgtcatcggattcttc 754
>dbj|D21880.1| Yeast DNA for THI3 regulatory protein, complete cds Length = 3169 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 161 tcaaatagactgaaacccatgtcgtcatcagattcttc 198 ||||||| || |||||||||||||||||| |||||||| Sbjct: 2756 tcaaataaaccgaaacccatgtcgtcatcggattcttc 2719
>dbj|D90072.1|YSCA1 Saccharomyces cerevisiae gene for acidic ribosomal protein A1, complete cds Length = 881 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 161 tcaaatagactgaaacccatgtcgtcatcagattcttc 198 ||||||| || |||||||||||||||||| |||||||| Sbjct: 629 tcaaataaaccgaaacccatgtcgtcatcggattcttc 592
>ref|XM_960079.1| Neurospora crassa OR74A hypothetical protein (NCU00979.1) partial mRNA Length = 333 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 197 tccttctcttcaaccttctcctccttctt 225 |||||||| |||||||||||||||||||| Sbjct: 293 tccttctcctcaaccttctcctccttctt 265
>ref|XM_325158.1| Neurospora crassa OR74A hypothetical protein (NCU00979.1) partial mRNA Length = 333 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 197 tccttctcttcaaccttctcctccttctt 225 |||||||| |||||||||||||||||||| Sbjct: 293 tccttctcctcaaccttctcctccttctt 265
>gb|DQ084041.1| Oxyuranus scutellatus 60S ribosomal protein P1 mRNA, partial cds Length = 319 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 159 agtcaaatagactgaaacccatgtcgtcatcagattcttcc 199 ||||||| |||| ||| ||||||||||| |||||||||||| Sbjct: 205 agtcaaaaagaccgaagcccatgtcgtcgtcagattcttcc 165
>ref|XM_755686.1| Ustilago maydis 521 hypothetical protein (UM04632.1) partial mRNA Length = 336 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctc 216 |||||| || |||| ||| |||||||||||||| || ||||||||||| || |||||| Sbjct: 336 ttagtcgaagagaccgaagcccatgtcgtcatcggactcttccttctcctcctccttctt 277 Query: 217 ctcct 221 ||||| Sbjct: 276 ctcct 272
>ref|XM_757109.1| Ustilago maydis 521 hypothetical protein (UM06055.1) partial mRNA Length = 942 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctc 216 |||||| || |||| ||| ||||||||||| ||||| || |||||||| || ||||||| Sbjct: 942 ttagtcgaagagaccgaagcccatgtcgtcgtcagactcctccttctcctcctccttctc 883 Query: 217 ctcct 221 ||||| Sbjct: 882 ctcct 878
>gb|U28373.1|YSCD9481 Saccharomyces cerevisiae chromosome IV cosmid 9481 Length = 42133 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 173 aaacccatgtcgtcatcagattcttcctt 201 ||||||||||| ||||||||||||||||| Sbjct: 37166 aaacccatgtcatcatcagattcttcctt 37138
>gb|AY786077.1| Penicillium brevicompactum 60S acidic ribosomal P1 phosphoprotein Pen b 26 (Pen b 26) mRNA, complete cds Length = 324 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctc 216 |||||| || |||| ||| |||||||| ||||| || || |||||||| || ||||||| Sbjct: 324 ttagtcgaagagaccgaagcccatgtcctcatcggactcctccttctcctcttccttctc 265 Query: 217 ctccttctt 225 ||||||||| Sbjct: 264 ctccttctt 256
>dbj|AB226183.1| Aspergillus oryzae cDNA, contig sequence: AoEST3042 Length = 728 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttc 214 |||||||| || |||| ||| |||||||| ||||| || || ||||||||||| ||||| Sbjct: 486 gcttagtcgaagagaccgaagcccatgtcctcatcggactcctccttctcttcctccttc 427 Query: 215 tcctc 219 ||||| Sbjct: 426 tcctc 422
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttc 214 |||||||| || |||| ||| |||||||| ||||| || || ||||||||||| ||||| Sbjct: 1614055 gcttagtcgaagagaccgaagcccatgtcctcatcggactcctccttctcttcctccttc 1613996 Query: 215 tcctc 219 ||||| Sbjct: 1613995 tcctc 1613991
>emb|X15206.1|CRCRE2 C.rubrum mRNA for light-induced 34kD protein Length = 1332 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 160 gtcaaatagactgaaacccatgtcgtcatcagattcttcct 200 |||||| ||||||||||| ||||| ||||| |||||||||| Sbjct: 1199 gtcaaagagactgaaaccgatgtcatcatctgattcttcct 1159
>gb|U32274.1|SCD9509 Saccharomyces cerevisiae chromosome IV cosmids 9481, 9509, 9926, 9461, and lambda 3641 Length = 55359 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 173 aaacccatgtcgtcatcagattcttcctt 201 ||||||||||| ||||||||||||||||| Sbjct: 2548 aaacccatgtcatcatcagattcttcctt 2520
>gb|J03761.1|YSCRGAP45 Yeast (S.cerevisiae) ribosomal protein L45 gene, complete cds Length = 953 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 173 aaacccatgtcgtcatcagattcttcctt 201 ||||||||||| ||||||||||||||||| Sbjct: 777 aaacccatgtcatcatcagattcttcctt 749
>gb|M26505.1|YSCL12EIA S.cerevisiae L12eIA protein gene, complete cds Length = 1008 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 173 aaacccatgtcgtcatcagattcttcctt 201 ||||||||||| ||||||||||||||||| Sbjct: 693 aaacccatgtcatcatcagattcttcctt 665
>ref|XM_500815.1| Yarrowia lipolytica CLIB122, YALI0B12804g predicted mRNA Length = 315 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctc 204 ||||||||| |||| ||| |||||||||||||| || || |||||||| Sbjct: 315 ttagtcaaagagaccgaagcccatgtcgtcatcggactcgtccttctc 268
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttc 198 |||||||| || | || |||||||||||||||||| |||||||| Sbjct: 605333 gcttagtcgaacaaaccgaaacccatgtcgtcatcggattcttc 605376
>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete sequence Length = 118196 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 185 tcatcagattcttccttctcttcaaccttctcctccttctttgactcagcagcagg 240 ||||| |||||||| |||||||| |||||| || ||||| |||||||||||||| Sbjct: 60424 tcatcggattcttctttctcttctttcttctcttctttcttggactcagcagcagg 60479 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 185 tcatcagattcttccttctcttcaaccttctcctccttctttgactcagcagcag 239 ||||| ||||||||||| ||||| |||||| || ||||| ||||||||||||| Sbjct: 62140 tcatcggattcttccttttcttccttcttctcttctttcttggactcagcagcag 62194 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 314 aacttctcccttccagctgcaatca 338 ||||||||||||||||| ||||||| Sbjct: 62275 aacttctcccttccagcagcaatca 62299 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 155 gcttagtcaaatagactgaaacccatgtc 183 ||||| || |||||||||||||||||||| Sbjct: 62005 gcttactcgaatagactgaaacccatgtc 62033
>emb|AJ534439.1|TBA534439 Timarcha balearica mRNA for 60S acidic ribosomal protein P0 (rpP0 gene) Length = 1106 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 158 tagtcaaatagactgaaacccatgtcgtcatc 189 |||||||| ||||||||||||||||| ||||| Sbjct: 1038 tagtcaaaaagactgaaacccatgtcatcatc 1007
>ref|NM_001022434.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBP8B7.06), partial mRNA Length = 333 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttcct 200 |||||| || |||| |||||||||||| ||||||||||| |||| Sbjct: 333 ttagtcgaaaagaccgaaacccatgtcttcatcagattcctcct 290
>emb|Y00466.1|SPRPL40C Yeast (S. pombe) mRNA for ribosomal protein L40c Length = 406 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttcct 200 |||||| || |||| |||||||||||| ||||||||||| |||| Sbjct: 339 ttagtcgaaaagaccgaaacccatgtcttcatcagattcctcct 296
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 177 ccatgtcgtcatcagattcttccttctcttc 207 |||||||||| ||||| |||||||||||||| Sbjct: 71549 ccatgtcgtcgtcagactcttccttctcttc 71519
>ref|XM_444905.1| Candida glabrata CBS138 hypothetical protein (CAGL0A03168g) partial mRNA Length = 330 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 |||||||||||||||||| |||||||| Sbjct: 315 gaaacccatgtcgtcatcggattcttc 289
>ref|XM_970843.1| PREDICTED: Tribolium castaneum similar to 60S acidic ribosomal protein P0 (DNA-(apurinic or apyrimidinic site) lyase) (Apurinic-apyrimidinic endonuclease), transcript variant 3 (LOC656653), mRNA Length = 1077 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatc 189 ||||||||||| |||| ||| |||||||||||||| Sbjct: 1011 gcttagtcaaagagaccgaagcccatgtcgtcatc 977
>ref|XM_961517.1| PREDICTED: Tribolium castaneum similar to 60S acidic ribosomal protein P0 (DNA-(apurinic or apyrimidinic site) lyase) (Apurinic-apyrimidinic endonuclease), transcript variant 1 (LOC656653), mRNA Length = 1272 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatc 189 ||||||||||| |||| ||| |||||||||||||| Sbjct: 1206 gcttagtcaaagagaccgaagcccatgtcgtcatc 1172
>ref|XM_970766.1| PREDICTED: Tribolium castaneum similar to 60S acidic ribosomal protein P0 (DNA-(apurinic or apyrimidinic site) lyase) (Apurinic-apyrimidinic endonuclease), transcript variant 2 (LOC656653), mRNA Length = 1028 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatc 189 ||||||||||| |||| ||| |||||||||||||| Sbjct: 962 gcttagtcaaagagaccgaagcccatgtcgtcatc 928
>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence Length = 485192 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttc 198 |||||||||||||||||| |||||||| Sbjct: 319635 gaaacccatgtcgtcatcggattcttc 319609
>gb|AC008217.5|AC008217 Drosophila melanogaster, chromosome 3R, region 98B-98B, BAC clone BACR10J03, complete sequence Length = 193245 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 195 cttccttctcttcaaccttctcctccttctt 225 |||||||||||||| ||||||||||||||| Sbjct: 136194 cttccttctcttcattcttctcctccttctt 136164
>gb|AC008253.8|AC008253 Drosophila melanogaster, chromosome 3R, region 98B1-98B2, BAC clone BACR48A16, complete sequence Length = 180887 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 195 cttccttctcttcaaccttctcctccttctt 225 |||||||||||||| ||||||||||||||| Sbjct: 104932 cttccttctcttcattcttctcctccttctt 104902
>gb|AF331715.1|AF331715 Podospora anserina ribosomal protein P2 gene, complete cds Length = 714 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctct 205 |||||||| || |||| ||| |||||||||||||| || || ||||||||| Sbjct: 486 gcttagtcgaagagaccgaagcccatgtcgtcatcggactcctccttctct 436
>gb|AE003762.4| Drosophila melanogaster chromosome 3R, section 100 of 118 of the complete sequence Length = 231486 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 195 cttccttctcttcaaccttctcctccttctt 225 |||||||||||||| ||||||||||||||| Sbjct: 165872 cttccttctcttcattcttctcctccttctt 165842
>gb|L39653.1|TAEARP Taenia solium acidic ribosomal phosphoprotein mRNA, complete cds Length = 459 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattc 195 ||||||||| ||||||||||||| ||| |||||||||| Sbjct: 442 ttagtcaaagggactgaaacccatatcggcatcagattc 404
>ref|XM_455332.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F05555g predicted mRNA Length = 315 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttcctt 201 |||||||||||| || |||||||||||||| Sbjct: 300 gaaacccatgtcatcgtcagattcttcctt 271
>ref|XM_455331.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F05566g predicted mRNA Length = 324 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 gaaacccatgtcgtcatcagattcttcctt 201 |||||||||||| || |||||||||||||| Sbjct: 19 gaaacccatgtcatcgtcagattcttcctt 48
>ref|XM_454948.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E22121g predicted mRNA Length = 321 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattcttcctt 201 |||||||||||| ||||| ||||||||||| Sbjct: 306 gaaacccatgtcatcatcggattcttcctt 277
>gb|AC147876.1| Homo sapiens BAC clone RP11-718M20 from 4, complete sequence Length = 119938 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 ggcacccccacctgaaggcaca 307 |||||||||||||||||||||| Sbjct: 20915 ggcacccccacctgaaggcaca 20894
>gb|AC122930.4| Mus musculus BAC clone RP23-13L19 from chromosome 9, complete sequence Length = 224108 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 tcttccttctcttcaaccttctcctc 219 |||||||||||||| ||||||||||| Sbjct: 219759 tcttccttctcttccaccttctcctc 219784
>gb|AF317661.1| Candida albicans 60S acidic ribosomal protein type P2-A (p2A) gene, complete cds Length = 476 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 248 gcaccaccagctgcagcagctggagc 273 ||||||||||| |||||||||||||| Sbjct: 343 gcaccaccagcagcagcagctggagc 318
>emb|AL031907.1|SPCC18 S.pombe chromosome III cosmid c18 Length = 40305 Score = 44.1 bits (22), Expect = 0.48 Identities = 46/54 (85%) Strand = Plus / Plus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttca 208 |||||||| || |||| |||||||||||| ||||| ||||| || | ||||||| Sbjct: 32056 gcttagtcgaagagaccgaaacccatgtcctcatcggattcctcttcctcttca 32109
>gb|AC102341.10| Mus musculus chromosome 8, clone RP23-214E1, complete sequence Length = 187701 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 242 gctgcggcaccaccagctgcagcagc 267 ||||| |||||||||||||||||||| Sbjct: 13107 gctgcagcaccaccagctgcagcagc 13082 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 gctgcggcaccaccagctgcagca 265 ||||| |||||||||||||||||| Sbjct: 13338 gctgcagcaccaccagctgcagca 13315
>gb|AC159899.2| Mus musculus BAC clone RP23-114N1 from chromosome 9, complete sequence Length = 198173 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 tcttccttctcttcaaccttctcctc 219 |||||||||||||| ||||||||||| Sbjct: 156483 tcttccttctcttccaccttctcctc 156458
>emb|X78223.2|CHCLAH4 Cladosporium herbarum mRNA for ribosomal protein P2 (ClaH4 gene) Length = 639 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctc 204 |||||||| || |||| ||| ||||||||||| ||||| || |||||||| Sbjct: 443 gcttagtcgaagagaccgaagcccatgtcgtcgtcagactcctccttctc 394
>emb|X78222.1|AAALTA6 A.alternata AltA6 ribosomal protein mRNA for minor allergen Length = 566 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctc 204 |||||||| || |||| |||||||||||| || ||||| || |||||||| Sbjct: 354 gcttagtcgaagagaccgaaacccatgtcctcgtcagactcctccttctc 305
>gb|AC073946.23| Mus musculus strain C57BL/6J chromosome 8 clone rp23-218e4, complete sequence Length = 196558 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 gctgcggcaccaccagctgcagcagc 267 ||||| |||||||||||||||||||| Sbjct: 35211 gctgcagcaccaccagctgcagcagc 35236 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gctgcggcaccaccagctgcagca 265 ||||| |||||||||||||||||| Sbjct: 34980 gctgcagcaccaccagctgcagca 35003
>gb|AC127682.4| Mus musculus BAC clone RP24-170O17 from 8, complete sequence Length = 144298 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 242 gctgcggcaccaccagctgcagcagc 267 ||||| |||||||||||||||||||| Sbjct: 142511 gctgcagcaccaccagctgcagcagc 142536 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gctgcggcaccaccagctgcagca 265 ||||| |||||||||||||||||| Sbjct: 142280 gctgcagcaccaccagctgcagca 142303 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gctgcggcaccaccagctgcagca 265 ||||| |||||||||||||||||| Sbjct: 142265 gctgcagcaccaccagctgcagca 142288 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gctgcggcaccaccagctgcagca 265 ||||| |||||||||||||||||| Sbjct: 142139 gctgcagcaccaccagctgcagca 142162 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gctgcggcaccaccagctgcagca 265 ||||| |||||||||||||||||| Sbjct: 142124 gctgcagcaccaccagctgcagca 142147 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gctgcggcaccaccagctgcagca 265 ||||| |||||||||||||||||| Sbjct: 142109 gctgcagcaccaccagctgcagca 142132 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 gctgcggcaccaccagctgcagca 265 ||||| |||||||||||||||||| Sbjct: 141848 gctgcagcaccaccagctgcagca 141871
>emb|CT033117.1| Platynereis dumerilii EST IB0AAA26BG01FM1 Length = 841 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 158 tagtcaaatagactgaaacccatgtcgtcatcagattc 195 |||||||| |||| ||| ||||| |||||||||||||| Sbjct: 222 tagtcaaagagaccgaatcccatatcgtcatcagattc 259
>gb|U87806.1|AAU87806 Alternaria alternata ribosomal P2 phosphoprotein mRNA, complete cds Length = 570 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Minus Query: 155 gcttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctc 204 |||||||| || |||| |||||||||||| || ||||| || |||||||| Sbjct: 344 gcttagtcgaagagaccgaaacccatgtcctcgtcagactcctccttctc 295
>gb|AC129582.10| Mus musculus chromosome 5, clone RP24-485O24, complete sequence Length = 184794 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 193 ttcttccttctcttcaaccttctcctcct 221 ||||||||||||||| |||| |||||||| Sbjct: 36028 ttcttccttctcttccacctcctcctcct 36000
>gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, complete sequence Length = 156084 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 cttcaaccttctcctccttct 224 ||||||||||||||||||||| Sbjct: 101345 cttcaaccttctcctccttct 101365
>gb|AC154375.2| Mus musculus BAC clone RP23-69H21 from chromosome 12, complete sequence Length = 169125 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 cagctgcagcagctggagctc 275 ||||||||||||||||||||| Sbjct: 57795 cagctgcagcagctggagctc 57775
>ref|XM_478030.1| Oryza sativa (japonica cultivar-group), mRNA Length = 504 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 197 tccttctcttcaaccttctcctcct 221 |||||||| |||||||||||||||| Sbjct: 455 tccttctcctcaaccttctcctcct 431
>gb|AY737538.1| Toxoptera citricida putative acidic p0 ribosomal protein mRNA, complete cds Length = 945 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatc 189 |||||||||||||| ||||||||| || ||||| Sbjct: 945 ttagtcaaatagaccgaaacccatatcatcatc 913
>gb|AC160930.2| Mus musculus BAC clone RP24-383F22 from chromosome 14, complete sequence Length = 230236 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 197 tccttctcttcaaccttctcctcct 221 |||||||||||| |||||||||||| Sbjct: 217072 tccttctcttcatccttctcctcct 217048
>gb|AC117657.11| Mus musculus chromosome 15, clone RP23-299O23, complete sequence Length = 198005 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 tcttccttctcttcaaccttctcctcctt 222 |||||||||||||| ||||||||||||| Sbjct: 59149 tcttccttctcttctcccttctcctcctt 59121
>ref|XM_360515.1| Magnaporthe grisea 70-15 hypothetical protein (MG10827.4) partial mRNA Length = 330 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctc 216 |||||| || |||| ||| |||||||| || || || || ||||||||||| ||||||| Sbjct: 330 ttagtcgaagagaccgaagcccatgtcctcgtcggactcctccttctcttcctccttctc 271 Query: 217 ctcct 221 ||||| Sbjct: 270 ctcct 266
>ref|XM_324452.1| Neurospora crassa OR74A predicted protein (NCU05096.1) partial mRNA Length = 1290 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 gcggcaccaccagctgcagca 265 ||||||||||||||||||||| Sbjct: 701 gcggcaccaccagctgcagca 681
>ref|XM_951989.1| Neurospora crassa OR74A hypothetical protein (NCU05096.1) partial mRNA Length = 1290 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 gcggcaccaccagctgcagca 265 ||||||||||||||||||||| Sbjct: 701 gcggcaccaccagctgcagca 681
>gb|BC046391.2| Homo sapiens involucrin, mRNA (cDNA clone MGC:25201 IMAGE:4749952), complete cds Length = 2138 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 gcagctggagctcccacagca 283 ||||||||||||||||||||| Sbjct: 682 gcagctggagctcccacagca 702
>gb|AC129576.11| Mus musculus chromosome 10, clone RP24-343D9, complete sequence Length = 136276 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 tcttcatcagcctcagcccca 409 ||||||||||||||||||||| Sbjct: 78542 tcttcatcagcctcagcccca 78562
>gb|AC122118.7| Mus musculus chromosome 18, clone RP24-225P17, complete sequence Length = 190301 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 193 ttcttccttctcttcaaccttctcctcct 221 ||||||||||||||| |||||||||||| Sbjct: 153797 ttcttccttctcttcctccttctcctcct 153825
>gb|AC138611.4| Mus musculus BAC clone RP23-41P19 from chromosome 18, complete sequence Length = 246348 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 193 ttcttccttctcttcaaccttctcctcct 221 ||||||||||||||| |||||||||||| Sbjct: 225729 ttcttccttctcttcctccttctcctcct 225701
>ref|XM_751300.1| Ustilago maydis 521 hypothetical protein (UM00246.1) partial mRNA Length = 627 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttcaaccttctc 216 |||||| || |||| ||| |||||||||||||| || || |||||||| || |||||| Sbjct: 627 ttagtcgaacagaccgaagcccatgtcgtcatccgactcctccttctcctcctccttctt 568 Query: 217 ctcct 221 ||||| Sbjct: 567 ctcct 563
>gb|AC175741.5| Mus musculus chromosome 1, clone wi1-1093I15, complete sequence Length = 39340 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 cttcaaccttctcctccttct 224 ||||||||||||||||||||| Sbjct: 30274 cttcaaccttctcctccttct 30294
>gb|AC125187.4| Mus musculus BAC clone RP23-302N11 from chromosome 7, complete sequence Length = 247402 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 197 tccttctcttcaaccttctcctccttctt 225 ||||||||||| |||||||||||||||| Sbjct: 120195 tccttctcttcctccttctcctccttctt 120223
>gb|BC099572.1| Mus musculus cDNA clone IMAGE:30918524 Length = 987 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 193 ttcttccttctcttcaaccttctcctccttctt 225 ||||||||||||||| ||| |||||||||||| Sbjct: 832 ttcttccttctcttcctcctcctcctccttctt 800
>emb|AL162596.30| Human DNA sequence from clone RP1-13P20 on chromosome 1q21.1-21.3 Contains the SPRL2A gene for small proline rich-like (epidermal differentiation complex) 2A, the LEP1 gene for late envelope protein 1, a novel gene, the MCSP gene for mitochondrial capsule selenoprotein and the IVL gene for involucrin, complete sequence Length = 116067 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 gcagctggagctcccacagca 283 ||||||||||||||||||||| Sbjct: 100880 gcagctggagctcccacagca 100900
>emb|AL160036.12| Human DNA sequence from clone RP11-555C15 on chromosome 13 Contains part of the GPC6 gene for glypican 6, complete sequence Length = 173526 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 194 tcttccttctcttcaaccttctcctccttcttt 226 ||||||| |||||| ||||||||||||| |||| Sbjct: 57081 tcttcctcctcttccaccttctcctcctccttt 57049
>emb|AL157895.8| Human DNA sequence from clone RP11-354E11 on chromosome 10 Contains the 5' end of a novel gene and a novel gene, complete sequence Length = 166317 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 197 tccttctcttcaaccttctcctccttctt 225 ||||||||||| |||||||||||||||| Sbjct: 137443 tccttctcttcctccttctcctccttctt 137471
>ref|XM_786131.1| PREDICTED: Strongylocentrotus purpuratus similar to 60S acidic ribosomal protein P2 (LOC586345), mRNA Length = 544 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 cccatgtcgtcatcagattcttcct 200 |||||||||||||||||||| |||| Sbjct: 356 cccatgtcgtcatcagattcctcct 332
>gb|AC163327.2| Mus musculus chromosome 1, clone RP24-297J20, complete sequence Length = 136606 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 194 tcttccttctcttcaaccttctcctccttcttt 226 ||||||| |||||| ||||||||||||||||| Sbjct: 13899 tcttcctcctcttcttccttctcctccttcttt 13867
>gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosome 10, complete sequence Length = 205283 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 tcttcatcagcctcagcccca 409 ||||||||||||||||||||| Sbjct: 182372 tcttcatcagcctcagcccca 182392
>emb|BX284752.1|NCB23B10 Neurospora crassa DNA linkage group II BAC contig B23B10 Length = 99967 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 gcggcaccaccagctgcagca 265 ||||||||||||||||||||| Sbjct: 34554 gcggcaccaccagctgcagca 34534
>emb|AJ843879.1| Platichthys flesus mRNA for 60S acidic ribosomal protein P1 (rplp1 gene) Length = 512 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatc 189 ||||||||| |||| ||| |||||||||||||| Sbjct: 472 ttagtcaaagagaccgaagcccatgtcgtcatc 440
>gb|AC128657.2| Homo sapiens 12 BAC RP11-1079J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60001 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 ccttctcctccttctttgact 230 ||||||||||||||||||||| Sbjct: 7860 ccttctcctccttctttgact 7880
>ref|NM_005547.2| Homo sapiens involucrin (IVL), mRNA Length = 2165 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 gcagctggagctcccacagca 283 ||||||||||||||||||||| Sbjct: 739 gcagctggagctcccacagca 759
>gb|DQ413217.1| Acyrthosiphon pisum isolate WHAP0192 putative acidic p0 ribosomal protein mRNA, complete cds Length = 945 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatc 189 |||||||||||||| ||||||||| || ||||| Sbjct: 945 ttagtcaaatagaccgaaacccatatcatcatc 913
>gb|AC036176.8| Homo sapiens chromosome 18, clone RP11-635N19, complete sequence Length = 173252 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 atcacttctgtgatgtcctta 355 ||||||||||||||||||||| Sbjct: 112748 atcacttctgtgatgtcctta 112728
>gb|AE010292.1| Pyrococcus furiosus DSM 3638, section 167 of 173 of the complete genome Length = 13064 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 202 ctcttcaaccttctcctccttcttt 226 |||||||||||| |||||||||||| Sbjct: 6473 ctcttcaaccttttcctccttcttt 6449
>gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complete sequence Length = 201215 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 193 ttcttccttctcttcaaccttctcctccttctt 225 |||||||||||| || |||||||||||||||| Sbjct: 84977 ttcttccttctcctcctccttctcctccttctt 85009
>gb|AY857422.1| Suberites domuncula L10e/P0 mRNA, complete cds Length = 942 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 cccatgtcgtcatcagattcttcct 200 |||||||| |||||||||||||||| Sbjct: 923 cccatgtcatcatcagattcttcct 899
>dbj|AK006585.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700031M16 product:unclassifiable, full insert sequence Length = 848 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 193 ttcttccttctcttcaaccttctcctccttctt 225 ||||||||||||||| ||| |||||||||||| Sbjct: 718 ttcttccttctcttcctcctcctcctccttctt 686
>ref|NM_170818.3| Caenorhabditis elegans Ribosomal Protein, Acidic family member (rpa-1) (rpa-1) mRNA, complete cds Length = 453 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttcctt 201 |||||| || |||| ||| |||||||||||||| ||||| ||||| Sbjct: 410 ttagtcgaagagaccgaagcccatgtcgtcatcggattcctcctt 366
>gb|AC119204.7| Mus musculus chromosome 1, clone RP24-188H2, complete sequence Length = 178603 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 194 tcttccttctcttcaaccttctcctccttcttt 226 ||||||| |||||| ||||||||||||||||| Sbjct: 61985 tcttcctcctcttcttccttctcctccttcttt 62017
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 197 tccttctcttcaaccttctcctcct 221 |||||||| |||||||||||||||| Sbjct: 16757694 tccttctcctcaaccttctcctcct 16757670
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 185 tcatcagattcttccttctcttcaaccttctcctccttctt 225 |||||||||||||| ||||| || |||||||| || ||||| Sbjct: 19475175 tcatcagattcttctttctcctccaccttctcttctttctt 19475215
>gb|AC009267.15|AC009267 Homo sapiens chromosome 18, clone RP11-495C15, complete sequence Length = 188923 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 atcacttctgtgatgtcctta 355 ||||||||||||||||||||| Sbjct: 129707 atcacttctgtgatgtcctta 129727
>gb|AC154738.2| Mus musculus BAC clone RP24-390D14 from chromosome 14, complete sequence Length = 197100 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 197 tccttctcttcaaccttctcctcct 221 |||||||||||| |||||||||||| Sbjct: 53936 tccttctcttcatccttctcctcct 53912
>gb|AF282904.1| Homo sapiens vacuolar protein sorting factor 4B (VPS4B) gene, complete cds Length = 37620 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 atcacttctgtgatgtcctta 355 ||||||||||||||||||||| Sbjct: 8960 atcacttctgtgatgtcctta 8940
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 185 tcatcagattcttccttctcttcaaccttctcctccttctt 225 |||||||||||||| ||||| || |||||||| || ||||| Sbjct: 92702 tcatcagattcttctttctcctccaccttctcttctttctt 92742
>gb|AC119935.17| Mus musculus chromosome 15, clone RP24-261L5, complete sequence Length = 163746 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 193 ttcttccttctcttcaaccttctcctccttctt 225 ||||||||||||||| ||| |||||||||||| Sbjct: 15150 ttcttccttctcttcctcctcctcctccttctt 15182
>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1115_C05 Length = 146585 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 197 tccttctcttcaaccttctcctcct 221 |||||||| |||||||||||||||| Sbjct: 97606 tccttctcctcaaccttctcctcct 97582
>dbj|AK110373.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-B12, full insert sequence Length = 3587 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 235 agcaggtgctgcggcaccaccagctgcagcagc 267 ||||| |||||| |||||| ||||||||||||| Sbjct: 1704 agcagctgctgcagcaccagcagctgcagcagc 1736
>dbj|AK115602.1| Ciona intestinalis cDNA, clone:cilv006l07, full insert sequence Length = 1070 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 cccatgtcgtcatcagattcttcct 200 |||||||||||||| |||||||||| Sbjct: 960 cccatgtcgtcatccgattcttcct 936
>dbj|AK113155.1| Ciona intestinalis cDNA, clone:ciad011a14, full insert sequence Length = 1088 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 cccatgtcgtcatcagattcttcct 200 |||||||||||||| |||||||||| Sbjct: 965 cccatgtcgtcatccgattcttcct 941
>dbj|AK112920.1| Ciona intestinalis cDNA, clone:ciad019k18, full insert sequence Length = 1086 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 cccatgtcgtcatcagattcttcct 200 |||||||||||||| |||||||||| Sbjct: 964 cccatgtcgtcatccgattcttcct 940
>gb|AC087079.1| Caenorhabditis elegans cosmid Y37E3, complete sequence Length = 106935 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttcctt 201 |||||| || |||| ||| |||||||||||||| ||||| ||||| Sbjct: 10030 ttagtcgaagagaccgaagcccatgtcgtcatcggattcctcctt 10074
>emb|AL772179.17| Mouse DNA sequence from clone RP23-100B18 on chromosome 2, complete sequence Length = 194065 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 197 tccttctcttcaaccttctcctccttctt 225 |||||||||||| ||| |||||||||||| Sbjct: 85761 tccttctcttcatcctcctcctccttctt 85789
>gb|U89307.1|CEU89307 Caenorhabditis elegans ribosomal protein P1 homolog mRNA, SL2 trans-spliced, complete cds Length = 468 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttcctt 201 |||||| || |||| ||| |||||||||||||| ||||| ||||| Sbjct: 420 ttagtcgaagagaccgaagcccatgtcgtcatcggattcctcctt 376
>gb|L11235.1|PIGAPOLIP Sus scrofa apolipoprotein B gene, 3' end cds Length = 10686 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 ttctcttcaaccttctcctccttct 224 |||||||| |||||||||||||||| Sbjct: 8000 ttctcttccaccttctcctccttct 8024
>gb|M20384.1|PIGAPOLPB7 Sus scrofa apolipoprotein B (allele Lph-7) gene, exons 26-29 Length = 7117 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 ttctcttcaaccttctcctccttct 224 |||||||| |||||||||||||||| Sbjct: 4453 ttctcttccaccttctcctccttct 4477
>gb|M13903.1|HUMINV2 Human involucrin gene, exon 2 Length = 2108 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 gcagctggagctcccacagca 283 ||||||||||||||||||||| Sbjct: 692 gcagctggagctcccacagca 712
>gb|AC138221.23| Mus musculus chromosome 15, clone RP23-204C16, complete sequence Length = 239740 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 193 ttcttccttctcttcaaccttctcctccttctt 225 ||||||||||||||| ||| |||||||||||| Sbjct: 35973 ttcttccttctcttcctcctcctcctccttctt 35941
>emb|X02632.1|ASEL12A Artemia salina mRNA for ribosomal protein eL12 Length = 339 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 248 gcaccaccagctgcagcagctggagctcc 276 |||||||| ||||||||||| |||||||| Sbjct: 248 gcaccaccggctgcagcagcaggagctcc 220
>gb|M17917.1|HUMIR3EB1 Human DNA with homology to EBV IR3 repeat, segment 1, clone Hu2 Length = 1400 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 gcagctggagctcccacagca 283 ||||||||||||||||||||| Sbjct: 1095 gcagctggagctcccacagca 1115
>gb|M22647.1|PIGAPOB02 Pig apolipoprotein B gene (Lpb), exons 26 through 29 Length = 7117 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 ttctcttcaaccttctcctccttct 224 |||||||| |||||||||||||||| Sbjct: 4453 ttctcttccaccttctcctccttct 4477
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 gctgcggcaccaccagctgcagca 265 ||||| |||||||||||||||||| Sbjct: 476814 gctgcagcaccaccagctgcagca 476791
>gb|AC102766.5| Mus musculus chromosome 5, clone RP23-20L22, complete sequence Length = 203741 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 194 tcttccttctcttcaaccttctcctccttctt 225 ||||||||||| || |||||||||||||||| Sbjct: 39255 tcttccttctcctcttccttctcctccttctt 39286
>gb|AC103636.11| Mus musculus chromosome 5, clone RP24-373A18, complete sequence Length = 185727 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 194 tcttccttctcttcaaccttctcctccttctt 225 ||||||||||| || |||||||||||||||| Sbjct: 138439 tcttccttctcctcttccttctcctccttctt 138470
>gb|AY621805.1| Euplotes vannus acidic ribosomal P2 protein gene, partial cds Length = 408 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 ttcttccttctcttcaaccttctc 216 |||||| ||||||||||||||||| Sbjct: 373 ttcttctttctcttcaaccttctc 350
>gb|AY894645.1| Cercopithecus aethiops clone CAE10 NBPF gene, partial cds Length = 1168 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 188 tcagattcttccttctcttcaaccttct 215 |||| |||||||||||||||| |||||| Sbjct: 485 tcaggttcttccttctcttcagccttct 458
>gb|AY894642.1| Cercopithecus aethiops clone CAE6 NBPF gene, partial cds Length = 1168 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 188 tcagattcttccttctcttcaaccttct 215 |||| |||||||||||||||| |||||| Sbjct: 485 tcaggttcttccttctcttcagccttct 458
>gb|BT016538.1| Zea mays clone Contig371 mRNA sequence Length = 707 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 170 ctgaaacccatgtcgtcatcagattcttcctt 201 ||||| ||||||||||||||||| || ||||| Sbjct: 408 ctgaagcccatgtcgtcatcagactcctcctt 377 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gcagcaggtgctgcggcaccaccagctg 260 ||||||| |||||| ||||||||||||| Sbjct: 345 gcagcagctgctgcagcaccaccagctg 318
>gb|BT018010.1| Zea mays clone EL01N0528A08.c mRNA sequence Length = 654 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 170 ctgaaacccatgtcgtcatcagattcttcctt 201 ||||| ||||||||||||||||| || ||||| Sbjct: 377 ctgaagcccatgtcgtcatcagactcctcctt 346
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cagcagcaggtgctgcggca 250 |||||||||||||||||||| Sbjct: 248790 cagcagcaggtgctgcggca 248771
>gb|AY389646.1| Hyacinthus orientalis ribosome-inactivating protein mRNA, partial cds Length = 777 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 gagttcagcaagaaggaact 380 |||||||||||||||||||| Sbjct: 366 gagttcagcaagaaggaact 385
>ref|XM_600173.2| PREDICTED: Bos taurus similar to 60S acidic ribosomal protein P2 (LOC521901), mRNA Length = 423 Score = 40.1 bits (20), Expect = 7.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 170 ctgaaacccatgtcgtcatcagattcttccttctcttcaaccttctcctccttctt 225 ||||| |||||||||||||| || || ||| |||||| ||||||||||||||| Sbjct: 380 ctgaagcccatgtcgtcatctgactcctccaactcttccttcttctcctccttctt 325
>gb|AC128859.4| Rattus norvegicus 10 BAC CH230-436I22 (Children's Hospital Oakland Research Institute) complete sequence Length = 156078 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 197 tccttctcttcaaccttctcctccttct 224 |||||||||| |||||||||||||||| Sbjct: 99550 tccttctctttcaccttctcctccttct 99577 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 197 tccttctcttcaaccttctcctccttct 224 |||||||||| |||||||||||||||| Sbjct: 99529 tccttctctttcaccttctcctccttct 99556
>gb|AC018491.9| Drosophila melanogaster clone BACR11H15, complete sequence Length = 177953 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gcaccaccagctgcagcagc 267 |||||||||||||||||||| Sbjct: 138595 gcaccaccagctgcagcagc 138614
>ref|XM_426506.1| PREDICTED: Gallus gallus similar to MGC64561 protein (LOC428951), mRNA Length = 1155 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gctgcagcagctggagctcc 276 |||||||||||||||||||| Sbjct: 519 gctgcagcagctggagctcc 538
>gb|AC102825.6| Mus musculus chromosome 15, clone RP24-227B12, complete sequence Length = 153145 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 cagctgcaatcacttctgtg 346 |||||||||||||||||||| Sbjct: 110243 cagctgcaatcacttctgtg 110262
>ref|XM_590989.2| PREDICTED: Bos taurus similar to Leucine zipper-EF-hand containing transmembrane protein 1, mitochondrial precursor (LOC513324), mRNA Length = 2388 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 197 tccttctcttcaaccttctcctccttct 224 |||||||| || |||||||||||||||| Sbjct: 2204 tccttctcctccaccttctcctccttct 2177
>gb|AY561519.1| Danio rerio acidic ribosomal protein P1 (rplP1) mRNA, complete cds Length = 498 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcaga 192 |||||| || |||| ||| ||||||||||||||||| Sbjct: 436 ttagtcgaacagaccgaagcccatgtcgtcatcaga 401
>gb|AC122941.3| Mus musculus BAC clone RP23-1E3 from chromosome 8, complete sequence Length = 244220 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 193 ttcttccttctcttcaaccttctcctccttct 224 ||||||||||||||| ||||||| ||||||| Sbjct: 138598 ttcttccttctcttcctccttctcttccttct 138629
>ref|XM_980684.1| PREDICTED: Mus musculus reproductive homeobox 1 (Rhox1), mRNA Length = 504 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cagctgcagcagctggagct 274 |||||||||||||||||||| Sbjct: 349 cagctgcagcagctggagct 368
>gb|AC110622.6| Mus musculus BAC clone RP23-204H3 from chromosome 8, complete sequence Length = 190632 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 194 tcttccttctcttcaaccttctcctcct 221 |||||||||||||| |||||||||||| Sbjct: 20039 tcttccttctcttcctccttctcctcct 20066
>gb|AC127377.4| Mus musculus BAC clone RP23-51N3 from chromosome 3, complete sequence Length = 195767 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 194 tcttccttctcttcaaccttctcctcct 221 |||||||||||||| |||||||||||| Sbjct: 3086 tcttccttctcttcttccttctcctcct 3113
>ref|XM_571539.1| Cryptococcus neoformans var. neoformans JEC21 ribosomal protein P2 (CNF02150) partial mRNA Length = 663 Score = 40.1 bits (20), Expect = 7.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 154 tgcttagtcaaatagactgaaacccatgtcgtcatcagattcttcctt 201 ||||||||| || |||| ||| ||||||||||| ||||| || ||||| Sbjct: 395 tgcttagtcgaagagaccgaagcccatgtcgtcgtcagactcctcctt 348
>ref|XM_446404.1| Candida glabrata CBS138, CAGL0G00990g partial mRNA Length = 936 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattc 195 |||||||||||||||||| ||||| Sbjct: 921 gaaacccatgtcgtcatcggattc 898
>gb|AC131758.3| Mus musculus BAC clone RP24-211E5 from chromosome 19, complete sequence Length = 206288 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 ccttctcttcaaccttctcctccttctt 225 |||||||||| |||||||||||||||| Sbjct: 44469 ccttctcttcccccttctcctccttctt 44496
>gb|AC125466.4| Mus musculus BAC clone RP23-477O24 from chromosome 9, complete sequence Length = 150128 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 accttctcctccttctttga 228 |||||||||||||||||||| Sbjct: 19105 accttctcctccttctttga 19086
>gb|AC126928.3| Mus musculus BAC clone RP24-337I23 from chromosome 9, complete sequence Length = 187235 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 accttctcctccttctttga 228 |||||||||||||||||||| Sbjct: 45877 accttctcctccttctttga 45896
>gb|AC135362.3| Mus musculus BAC clone RP23-286J13 from chromosome 8, complete sequence Length = 173357 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 193 ttcttccttctcttcaaccttctcctccttct 224 ||||||||||||||| ||||||| ||||||| Sbjct: 114875 ttcttccttctcttcctccttctcttccttct 114844
>gb|AC115303.6| Mus musculus BAC clone RP24-108I6 from chromosome 1, complete sequence Length = 192812 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aaacatatacattgtcccaa 46 |||||||||||||||||||| Sbjct: 67410 aaacatatacattgtcccaa 67391
>emb|CR391986.5| Zebrafish DNA sequence from clone CH211-195O20 in linkage group 17, complete sequence Length = 131805 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cccttccagctgcaatcact 340 |||||||||||||||||||| Sbjct: 90152 cccttccagctgcaatcact 90171
>ref|XM_710145.1| Candida albicans SC5314 hypothetical protein (CaO19.7189) partial mRNA Length = 351 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 atgtcgtcatcagattcttc 198 |||||||||||||||||||| Sbjct: 1 atgtcgtcatcagattcttc 20
>emb|CR693295.2|CNS0FXWB Tetraodon nigroviridis full-length cDNA Length = 1054 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 ctcttcaaccttctcctcct 221 |||||||||||||||||||| Sbjct: 158 ctcttcaaccttctcctcct 139
>emb|CR685019.2|CNS0FRIF Tetraodon nigroviridis full-length cDNA Length = 1184 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 ctcttcaaccttctcctcct 221 |||||||||||||||||||| Sbjct: 256 ctcttcaaccttctcctcct 237
>emb|AL683871.15| Human DNA sequence from clone RP13-76L22 on chromosome X, complete sequence Length = 175765 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 194 tcttccttctcttcaaccttctcctcct 221 ||||||||||| ||| |||||||||||| Sbjct: 93732 tcttccttctcctcatccttctcctcct 93759
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cagcagcaggtgctgcggca 250 |||||||||||||||||||| Sbjct: 2863360 cagcagcaggtgctgcggca 2863341
>ref|XM_793147.1| PREDICTED: Strongylocentrotus purpuratus similar to ataxin 7-like 2 (LOC593678), partial mRNA Length = 1907 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gcaccaccagctgcagcagc 267 |||||||||||||||||||| Sbjct: 1438 gcaccaccagctgcagcagc 1419
>ref|XM_776676.1| PREDICTED: Strongylocentrotus purpuratus similar to Jumonji/ARID domain-containing protein 1D (SmcY protein) (Histocompatibility Y antigen) (H-Y) (LOC576361), mRNA Length = 3612 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gcaccaccagctgcagcagc 267 |||||||||||||||||||| Sbjct: 1496 gcaccaccagctgcagcagc 1477
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 gaaacccatgtcgtcatcagattc 195 |||||||||||||||||| ||||| Sbjct: 89909 gaaacccatgtcgtcatcggattc 89886
>emb|BX842629.1| Neurospora crassa DNA linkage group I BAC contig B20J13 Length = 126048 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcaaccttctcctccttctt 225 |||||||||||||||||||| Sbjct: 98391 tcaaccttctcctccttctt 98410
>emb|AL117183.1|SPCP1E11 S.pombe chromosome III p1 clone p1E11 Length = 25057 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 173 aaacccatgtcgtcatcagattcttcct 200 ||||||||||| |||||||| ||||||| Sbjct: 20602 aaacccatgtcctcatcagactcttcct 20629
>emb|CR381635.11| Zebrafish DNA sequence from clone DKEY-171C9 in linkage group 7, complete sequence Length = 173058 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cccttccagctgcaatcact 340 |||||||||||||||||||| Sbjct: 86763 cccttccagctgcaatcact 86782
>emb|BX936327.3| Zebrafish DNA sequence from clone DKEY-21E10 in linkage group 3, complete sequence Length = 105845 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cccttccagctgcaatcact 340 |||||||||||||||||||| Sbjct: 31972 cccttccagctgcaatcact 31991
>gb|AC061708.17| Homo sapiens 3 BAC RP11-654K19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166979 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 ccttctcctccttctttgac 229 |||||||||||||||||||| Sbjct: 62834 ccttctcctccttctttgac 62853
>gb|AC107326.4| Drosophila melanogaster X BAC RP98-33A8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177096 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 cttcaaccttctcctccttc 223 |||||||||||||||||||| Sbjct: 63770 cttcaaccttctcctccttc 63789
>gb|AE012543.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 451 of 460 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 tgcggcaccaccagctgcagcagc 267 |||||||||||| ||||||||||| Sbjct: 8607 tgcggcaccacctgctgcagcagc 8630
>ref|NM_134527.1| Drosophila melanogaster CG15322-RA (CG15322), mRNA Length = 2217 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gcaccaccagctgcagcagc 267 |||||||||||||||||||| Sbjct: 615 gcaccaccagctgcagcagc 634
>gb|AY940014.1| Uncultured bacterium clone P91-6 small subunit ribosomal RNA gene, partial sequence Length = 968 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 432 tgtcaccggcagtcggggaagagttcccaccc 463 |||||||||||||| || ||||||||||||| Sbjct: 875 tgtcaccggcagtctggttagagttcccaccc 844
>ref|NM_001025084.1| Mus musculus reproductive homeobox 1 (Rhox1), mRNA Length = 884 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cagctgcagcagctggagct 274 |||||||||||||||||||| Sbjct: 535 cagctgcagcagctggagct 554
>dbj|AK036492.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830118G07 product:hypothetical ARM repeat structure containing protein, full insert sequence Length = 2635 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 cagctgcaatcacttctgtg 346 |||||||||||||||||||| Sbjct: 1826 cagctgcaatcacttctgtg 1807
>gb|AC157214.2| Mus musculus BAC clone RP23-35J2 from chromosome 19, complete sequence Length = 207625 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 198 ccttctcttcaaccttctcctccttctt 225 |||||||||| |||||||||||||||| Sbjct: 10816 ccttctcttcccccttctcctccttctt 10789
>ref|NM_001023549.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCP1E11.09c), partial mRNA Length = 330 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 aaacccatgtcgtcatcagattcttcct 200 ||||||||||| |||||||| ||||||| Sbjct: 314 aaacccatgtcctcatcagactcttcct 287
>ref|NM_001023384.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC18.14c), partial mRNA Length = 939 Score = 40.1 bits (20), Expect = 7.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 157 ttagtcaaatagactgaaacccatgtcgtcatcagattcttccttctcttca 208 |||||| || |||| |||||||||||| ||||| ||||| || | ||||||| Sbjct: 939 ttagtcgaagagaccgaaacccatgtcctcatcggattcctcttcctcttca 888
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 159 agtcaaatagactgaaacccatgtcgtcatcagattcttc 198 |||| ||||||| ||| ||||||||||| ||||| ||||| Sbjct: 729725 agtcgaatagaccgaagcccatgtcgtcgtcagactcttc 729764
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 tgcggcaccaccagctgcagcagc 267 |||||||||||| ||||||||||| Sbjct: 5055731 tgcggcaccacctgctgcagcagc 5055754 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,055,164 Number of Sequences: 3902068 Number of extensions: 5055164 Number of successful extensions: 179582 Number of sequences better than 10.0: 298 Number of HSP's better than 10.0 without gapping: 298 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 178540 Number of HSP's gapped (non-prelim): 1037 length of query: 549 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 526 effective length of database: 17,143,297,704 effective search space: 9017374592304 effective search space used: 9017374592304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)