>DPOLA_ORYSA (O48653) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1534

 Score =  245 bits (626), Expect = 8e-65
 Identities = 114/130 (87%), Positives = 122/130 (93%)
 Frame = -1

Query: 680  KRQADTFINRYYKGLLMCDDEGCKYSTHIVNLRVMGDSERGTICPNYPQCNGRLVRQYTE 501
            KRQAD+FIN YYKGLLMCDDEGCKYSTH VNLRVMGDSERGTICPNYP+CNG LVRQYTE
Sbjct: 1405 KRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPRCNGHLVRQYTE 1464

Query: 500  ADLYRQLSYFCYVLDAARCLEKLDQKIRLPFEKEFAVLNQTISLAFLEIQKIRDRCAFGW 321
            ADLYRQLSYFCYV+DA RCLEKLDQK RLPFEKEFA L+QTI+LA +E+QKIRDRCAFGW
Sbjct: 1465 ADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKEFAALSQTINLALMEVQKIRDRCAFGW 1524

Query: 320  VQLTDLAVSI 291
            VQL DLA+SI
Sbjct: 1525 VQLKDLAISI 1534

>DPOLA_ARATH (Q9FHA3) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1492

 Score =  158 bits (400), Expect = 1e-38
 Identities = 66/128 (51%), Positives = 93/128 (72%)
 Frame = -1

Query: 680  KRQADTFINRYYKGLLMCDDEGCKYSTHIVNLRVMGDSERGTICPNYPQCNGRLVRQYTE 501
            KRQ D F++ YYKG+++C+DE CK++T   N R++G+ ERGT+CPNYP CNG L+R+YTE
Sbjct: 1365 KRQIDGFVSMYYKGIMVCEDESCKHTTRSPNFRLLGERERGTVCPNYPNCNGTLLRKYTE 1424

Query: 500  ADLYRQLSYFCYVLDAARCLEKLDQKIRLPFEKEFAVLNQTISLAFLEIQKIRDRCAFGW 321
            ADLY+QLSYFC++LD    LEK+D  +R+  EK    +   +  A    +  RDRCA+GW
Sbjct: 1425 ADLYKQLSYFCHILDTQCSLEKMDVGVRIQVEKAMTKIRPAVKSAAAITRSSRDRCAYGW 1484

Query: 320  VQLTDLAV 297
            +QLTD+ +
Sbjct: 1485 MQLTDIVI 1492

>DPOLA_DROME (P26019) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1488

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
 Frame = -1

Query: 662  FINRYYKGLLMCDDEGCKYSTHIVNLRVMGDSERGTICPNYPQC-NGRLVRQYTEADLYR 486
            ++ R+YK  L+CD   C ++T   +LR           P   +C +G L+RQYTE DLY 
Sbjct: 1351 YVQRFYKNWLVCDHPDCNFNTRTHSLRKKSHR------PLCQKCRSGSLLRQYTERDLYN 1404

Query: 485  QLSYFCYVLDAARCLEKLDQKIRL--PFEKEFAVLNQTI 375
            QL Y  ++ D  +  + L QK  L    E+ + +L +T+
Sbjct: 1405 QLCYLRFMFDLGK--QTLQQKPTLTPELEQAYQLLYETV 1441

>DPOLA_HUMAN (P09884) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1462

 Score = 49.7 bits (117), Expect = 8e-06
 Identities = 27/77 (35%), Positives = 42/77 (54%)
 Frame = -1

Query: 662  FINRYYKGLLMCDDEGCKYSTHIVNLRVMGDSERGTICPNYPQCNGRLVRQYTEADLYRQ 483
            FI +YY G L+C++  C+  T  + L+    S  G +CP   +    L  +Y++  LY Q
Sbjct: 1337 FIKKYYDGWLICEEPTCRNRTRHLPLQF---SRTGPLCPACMKAT--LQPEYSDKSLYTQ 1391

Query: 482  LSYFCYVLDAARCLEKL 432
            L ++ Y+ DA   LEKL
Sbjct: 1392 LCFYRYIFDAECALEKL 1408

>DPOLA_RAT (O89042) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
            (Fragment)
          Length = 1451

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = -1

Query: 659  INRYYKGLLMCDDEGCKYSTHIVNLRVMGDSERGTICPNYPQCNGRLVR-QYTEADLYRQ 483
            I +YY G L+C++  C+     + L     S  G +CP    C   ++R +Y++  LY Q
Sbjct: 1345 IKKYYDGWLICEEPTCRNRIRRLPLHF---SRNGPLCP---ACMKAVLRPEYSDKSLYTQ 1398

Query: 482  LSYFCYVLDAARCLEKLDQKIRLPFEKEF 396
            L ++ Y+ DA   LEKL +  +   +K+F
Sbjct: 1399 LCFYRYIFDADCALEKLPEHEKDKLKKQF 1427

>DPOLA_MOUSE (P33609) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1465

 Score = 46.2 bits (108), Expect = 9e-05
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = -1

Query: 659  INRYYKGLLMCDDEGCKYSTHIVNLRVMGDSERGTICPNYPQCNGRLVR-QYTEADLYRQ 483
            I +YY G L+C++  C      + L     S  G +CP    C   ++R +Y++  LY Q
Sbjct: 1342 IKKYYDGWLICEEPTCCSRLRRLPLHF---SRNGPLCP---VCMKAVLRPEYSDKSLYTQ 1395

Query: 482  LSYFCYVLDAARCLEKLDQKIRLPFEKEF 396
            L ++ Y+ DA   LEKL +  +   +K+F
Sbjct: 1396 LCFYRYIFDADCALEKLTEHEKDKLKKQF 1424

>DPOLA_XENLA (Q9DE46) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1458

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
 Frame = -1

Query: 662  FINRYYKGLLMCDDEGCKYSTHIVNLRVMGDSERGTICPNYPQCNGRLVR-QYTEADLYR 486
            +I +YY G L+C+++ C+  T  + L     S  G IC     C+   +R +Y E  LY 
Sbjct: 1334 YIKKYYSGWLVCEEKTCQNRTRRLPLSF---SRNGPIC---QACSKATLRSEYPEKALYT 1387

Query: 485  QLSYFCYVLDAARCLEK---------LDQKIRLPFEKEFAVLNQTI 375
            QL ++ ++ D    LEK         L +K+    E ++  L  T+
Sbjct: 1388 QLCFYRFIFDWDYALEKVVSEQERGHLKKKLFQESENQYKKLKSTV 1433

>DPOA_SCHPO (P28040) DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA|
            polymerase I)
          Length = 1405

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 23/67 (34%), Positives = 32/67 (47%)
 Frame = -1

Query: 674  QADTFINRYYKGLLMCDDEGCKYSTHIVNLRVMGDSERGTICPNYPQCNGRLVRQYTEAD 495
            Q   FIN YY+G+L+CDD  C   T  +       S  G  C N   C G +  +Y +  
Sbjct: 1301 QLRDFINLYYEGILVCDDSSCGNRTRQM-------SVYGKRCCN-KSCRGSVHFEYNDEQ 1352

Query: 494  LYRQLSY 474
            LY Q+ +
Sbjct: 1353 LYNQIKF 1359

>DPOA_YEAST (P13382) DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA|
            polymerase I)
          Length = 1468

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 27/88 (30%), Positives = 42/88 (47%)
 Frame = -1

Query: 659  INRYYKGLLMCDDEGCKYSTHIVNLRVMGDSERGTICPNYPQCNGRLVRQYTEADLYRQL 480
            I+ YY G L CDD  C   T  V++        G  C N   C G +  +Y++  LY QL
Sbjct: 1338 ISLYYAGWLQCDDSTCGIVTRQVSVF-------GKRCLN-DGCTGVMRYKYSDKQLYNQL 1389

Query: 479  SYFCYVLDAARCLEKLDQKIRLPFEKEF 396
             YF  + D  +  ++  + I LP + ++
Sbjct: 1390 LYFDSLFDCEKNKKQELKPIYLPDDLDY 1417

>MFRP_MOUSE (Q8K480) Membrane frizzled-related protein (Membrane-type|
           frizzled-related protein)
          Length = 584

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 305 DLSIEPIQKHICHGFS-ESPEMPSLWFGLILQT 400
           DL+ EP+Q  +C G S  +   P++W GL  QT
Sbjct: 468 DLTCEPVQVEMCLGLSYNTTAFPNIWVGLATQT 500

>KGUA_LACLA (Q9CEE3) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 205

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = -1

Query: 548 PNYPQCNGRLVRQYTEADLYRQLSYFCYVLDAARCLEKLDQKIRLPFEKEFAVLNQTISL 369
           P+  +  GRLV + T++               A  LEK  ++IRL  E ++AV+N  + L
Sbjct: 125 PDLEELRGRLVGRGTDSAEV-----------IASRLEKAKEEIRLMSEYDYAVVNDKVEL 173

Query: 368 AFLEIQKI 345
           A   ++KI
Sbjct: 174 AAERVKKI 181


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,464,699
Number of Sequences: 219361
Number of extensions: 2054847
Number of successful extensions: 4193
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4189
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)