ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags1a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
2ref|NM_194929.1| Oryza sativa (japonica cultivar-group) putative... 426 e-116
3gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome... 426 e-116
4gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome... 426 e-116
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 426 e-116
6dbj|AK061152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 426 e-116
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 426 e-116
8gb|AY110655.1| Zea mays CL9117_1 mRNA sequence 206 6e-50
9ref|NM_112675.3| Arabidopsis thaliana aldose 1-epimerase AT3G179... 60 9e-06
10gb|AY039932.1| Arabidopsis thaliana putative aldose 1-epimerase ... 60 9e-06
11emb|BX824889.1|CNS0A6X7 Arabidopsis thaliana Full-length cDNA Co... 60 9e-06
12emb|BX822398.1|CNS0A708 Arabidopsis thaliana Full-length cDNA Co... 60 9e-06
13dbj|AB019230.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 60 9e-06
14gb|BT001908.1| Arabidopsis thaliana clone C105464 putative aldos... 60 9e-06
15gb|DQ200393.1| Solanum tuberosum clone 069B08 unknown mRNA 42 2.0
16gb|AE009134.1| Agrobacterium tumefaciens str. C58 circular chrom... 42 2.0
17ref|NM_006836.1| Homo sapiens GCN1 general control of amino-acid... 42 2.0
18ref|XM_534701.2| PREDICTED: Canis familiaris similar to GCN1 gen... 42 2.0
19emb|AL031737.2|HS8B22 Human DNA sequence from clone RP1-8B22 on ... 42 2.0
20dbj|D86973.2| Homo sapiens mRNA for KIAA0219 gene, partial cds 42 2.0
21gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 42 2.0
22dbj|AK090187.1| Mus musculus 15 days embryo brain cDNA, RIKEN fu... 42 2.0
23gb|AC004812.1|AC004812 Homo sapiens PAC clone 267D11 from 12, co... 42 2.0
24gb|U77700.1|HSU77700 Homo sapiens HsGCN1 mRNA, partial cds 42 2.0
25ref|XM_633911.1| Dictyostelium discoideum hypothetical protein (... 40 8.1
26ref|XM_616264.2| PREDICTED: Bos taurus similar to GCN1 general c... 40 8.1
27ref|XM_751098.1| Ustilago maydis 521 hypothetical protein (UM000... 40 8.1
28gb|AY594294.1| Nicotiana benthamiana truncated actin 1 mRNA, par... 40 8.1
29emb|AL451074.13| Human DNA sequence from clone RP11-466F5 on chr... 40 8.1
30gb|AC116318.7| Mus musculus BAC clone RP23-80L14 from chromosome... 40 8.1
31gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 40 8.1
32emb|AL080313.13|HSDJ448I9 Human DNA sequence from clone RP3-448I... 40 8.1
33emb|BX571658.1| Wolinella succinogenes, complete genome; segment... 40 8.1
34emb|AJ287207.1|TPI287207 Thamnostylum piriforme partial act-1 ge... 40 8.1
35gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 8.1
36gb|DP000030.1| Sus scrofa target 116 genomic scaffold 40 8.1
37emb|AL928622.9| Zebrafish DNA sequence from clone DKEY-31O13, co... 40 8.1
38gb|AC129557.10| Mus musculus chromosome 19, clone RP24-245F23, c... 40 8.1
39gb|AC131797.3| Mus musculus BAC clone RP24-496C20 from 1, comple... 40 8.1 
>dbj|AK121800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096P07, full
            insert sequence
          Length = 1341

 Score =  434 bits (219), Expect = e-118
 Identities = 399/459 (86%)
 Strand = Plus / Minus

                                                                        
Query: 136  gctgagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagac 195
            |||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||| || 
Sbjct: 1097 gctgagaactcaaacagcatagtgtgcttatacttctcaccaggctgcaccaccacggag 1038

                                                                        
Query: 196  gggaaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgca 255
            ||||||||||  |||||||||||||| || |||||||||||||||||||||||||| | |
Sbjct: 1037 gggaaattgggttggttgatggcattaggaaacccctgggtttccaagcatactccggaa 978

                                                                        
Query: 256  tgcttcccgtaaacagctccgcctttgcccgtgatgccattcacatagttggcggtatag 315
            |||||||| ||||| || || |||||||| || | ||||| ||||||||| || || |||
Sbjct: 977  tgcttcccataaacggcaccacctttgccagttacgccatccacatagttagcagtgtag 918

                                                                        
Query: 316  aactgcatgccaggcgcatcggtccagaggtccagagtccgtgagctcgacgagtccttt 375
            |||||||| ||||| ||||| |||||||||||||| ||||||||| |||| || || || 
Sbjct: 917  aactgcattccaggtgcatcagtccagaggtccagggtccgtgagttcgatgaatctttc 858

                                                                        
Query: 376  agctttgctgcgtgcttcaggccattcttctcatcacccgagtccaacacatagttatga 435
            ||||| || || |||||||||||||||||||| || || ||||||| |||||||||||| 
Sbjct: 857  agcttggcagcatgcttcaggccattcttctcttcgccagagtccagcacatagttatgg 798

                                                                        
Query: 436  tcgtatcctccaggaacatcgttgatgcgatctccaatcctgtgctccgtggtgaaatcg 495
            || ||||||||||| ||||||||||||||  |||||||||||||||| || ||||| |||
Sbjct: 797  tcatatcctccaggcacatcgttgatgcgggctccaatcctgtgctctgttgtgaagtcg 738

                                                                        
Query: 496  aaaggtgtgtcctggacggacattatttctccggtgggaatcgtgttttcattgactgga 555
            ||||||||| ||| ||| | |||||| || ||||||||||||||||| || |  ||||||
Sbjct: 737  aaaggtgtgcccttgacaggcattatctcaccggtgggaatcgtgttctcgtcaactgga 678

                                                   
Query: 556  gtgatgtgttttgcccagatctggatcgaatgatccaag 594
            || ||||||||| ||||||||||||| ||||||||||||
Sbjct: 677  gttatgtgttttccccagatctggattgaatgatccaag 639
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>ref|NM_194929.1| Oryza sativa (japonica cultivar-group) putative aldose 1-epimerase -
            like protein (OSJNAa0034B05.14), mRNA
          Length = 1032

 Score =  426 bits (215), Expect = e-116
 Identities = 398/459 (86%)
 Strand = Plus / Minus

                                                                        
Query: 136  gctgagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagac 195
            |||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||| || 
Sbjct: 1028 gctgagaactcaaacagcatagtgtgcttatacttctcaccaggctgcaccaccacggag 969

                                                                        
Query: 196  gggaaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgca 255
            ||||||||||  |||||||||||||| || |||||||||||||||||||||||||| | |
Sbjct: 968  gggaaattgggttggttgatggcattaggaaacccctgggtttccaagcatactccggaa 909

                                                                        
Query: 256  tgcttcccgtaaacagctccgcctttgcccgtgatgccattcacatagttggcggtatag 315
            |||||||| ||||| || || |||||||| || | ||||| ||||||||| || || |||
Sbjct: 908  tgcttcccataaacggcaccacctttgccagttacgccatccacatagttagcagtgtag 849

                                                                        
Query: 316  aactgcatgccaggcgcatcggtccagaggtccagagtccgtgagctcgacgagtccttt 375
            |||||||| ||||| ||||| |||||||||||||| ||||||||| |||| || || || 
Sbjct: 848  aactgcattccaggtgcatcagtccagaggtccagggtccgtgagttcgatgaatctttc 789

                                                                        
Query: 376  agctttgctgcgtgcttcaggccattcttctcatcacccgagtccaacacatagttatga 435
            ||||| || || |||||||||||||||||||| || || ||||||| |||||||||||| 
Sbjct: 788  agcttggcagcatgcttcaggccattcttctcttcgccagagtccagcacatagttatgg 729

                                                                        
Query: 436  tcgtatcctccaggaacatcgttgatgcgatctccaatcctgtgctccgtggtgaaatcg 495
            || ||||||||||| ||||||||||||||  |||||||| ||||||| || ||||| |||
Sbjct: 728  tcatatcctccaggcacatcgttgatgcgggctccaatcttgtgctctgttgtgaagtcg 669

                                                                        
Query: 496  aaaggtgtgtcctggacggacattatttctccggtgggaatcgtgttttcattgactgga 555
            ||||||||| ||| ||| | |||||| || ||||||||||||||||| || |  ||||||
Sbjct: 668  aaaggtgtgcccttgacaggcattatctcaccggtgggaatcgtgttctcgtcaactgga 609

                                                   
Query: 556  gtgatgtgttttgcccagatctggatcgaatgatccaag 594
            || ||||||||| ||||||||||||| ||||||||||||
Sbjct: 608  gttatgtgttttccccagatctggattgaatgatccaag 570
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>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0004E08, complete sequence
          Length = 158294

 Score =  426 bits (215), Expect = e-116
 Identities = 398/459 (86%)
 Strand = Plus / Plus

                                                                         
Query: 136   gctgagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagac 195
             |||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||| || 
Sbjct: 45979 gctgagaactcaaacagcatagtgtgcttatacttctcaccaggctgcaccaccacggag 46038

                                                                         
Query: 196   gggaaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgca 255
             ||||||||||  |||||||||||||| || |||||||||||||||||||||||||| | |
Sbjct: 46039 gggaaattgggttggttgatggcattaggaaacccctgggtttccaagcatactccggaa 46098

                                                                         
Query: 256   tgcttcccgtaaacagctccgcctttgcccgtgatgccattcacatagttggcggtatag 315
             |||||||| ||||| || || |||||||| || | ||||| ||||||||| || || |||
Sbjct: 46099 tgcttcccataaacggcaccacctttgccagttacgccatccacatagttagcagtgtag 46158

                                                                         
Query: 316   aactgcatgccaggcgcatcggtccagaggtccagagtccgtgagctcgacgagtccttt 375
             |||||||| ||||| ||||| |||||||||||||| ||||||||| |||| || || || 
Sbjct: 46159 aactgcattccaggtgcatcagtccagaggtccagggtccgtgagttcgatgaatctttc 46218

                                                                         
Query: 376   agctttgctgcgtgcttcaggccattcttctcatcacccgagtccaacacatagttatga 435
             ||||| || || |||||||||||||||||||| || || ||||||| |||||||||||| 
Sbjct: 46219 agcttggcagcatgcttcaggccattcttctcttcgccagagtccagcacatagttatgg 46278

                                                                         
Query: 436   tcgtatcctccaggaacatcgttgatgcgatctccaatcctgtgctccgtggtgaaatcg 495
             || ||||||||||| ||||||||||||||  |||||||| ||||||| || ||||| |||
Sbjct: 46279 tcatatcctccaggcacatcgttgatgcgggctccaatcttgtgctctgttgtgaagtcg 46338

                                                                         
Query: 496   aaaggtgtgtcctggacggacattatttctccggtgggaatcgtgttttcattgactgga 555
             ||||||||| ||| ||| | |||||| || ||||||||||||||||| || |  ||||||
Sbjct: 46339 aaaggtgtgcccttgacaggcattatctcaccggtgggaatcgtgttctcgtcaactgga 46398

                                                    
Query: 556   gtgatgtgttttgcccagatctggatcgaatgatccaag 594
             || ||||||||| ||||||||||||| ||||||||||||
Sbjct: 46399 gttatgtgttttccccagatctggattgaatgatccaag 46437
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>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05,
              complete sequence
          Length = 125655

 Score =  426 bits (215), Expect = e-116
 Identities = 398/459 (86%)
 Strand = Plus / Plus

                                                                          
Query: 136    gctgagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagac 195
              |||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||| || 
Sbjct: 111634 gctgagaactcaaacagcatagtgtgcttatacttctcaccaggctgcaccaccacggag 111693

                                                                          
Query: 196    gggaaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgca 255
              ||||||||||  |||||||||||||| || |||||||||||||||||||||||||| | |
Sbjct: 111694 gggaaattgggttggttgatggcattaggaaacccctgggtttccaagcatactccggaa 111753

                                                                          
Query: 256    tgcttcccgtaaacagctccgcctttgcccgtgatgccattcacatagttggcggtatag 315
              |||||||| ||||| || || |||||||| || | ||||| ||||||||| || || |||
Sbjct: 111754 tgcttcccataaacggcaccacctttgccagttacgccatccacatagttagcagtgtag 111813

                                                                          
Query: 316    aactgcatgccaggcgcatcggtccagaggtccagagtccgtgagctcgacgagtccttt 375
              |||||||| ||||| ||||| |||||||||||||| ||||||||| |||| || || || 
Sbjct: 111814 aactgcattccaggtgcatcagtccagaggtccagggtccgtgagttcgatgaatctttc 111873

                                                                          
Query: 376    agctttgctgcgtgcttcaggccattcttctcatcacccgagtccaacacatagttatga 435
              ||||| || || |||||||||||||||||||| || || ||||||| |||||||||||| 
Sbjct: 111874 agcttggcagcatgcttcaggccattcttctcttcgccagagtccagcacatagttatgg 111933

                                                                          
Query: 436    tcgtatcctccaggaacatcgttgatgcgatctccaatcctgtgctccgtggtgaaatcg 495
              || ||||||||||| ||||||||||||||  |||||||| ||||||| || ||||| |||
Sbjct: 111934 tcatatcctccaggcacatcgttgatgcgggctccaatcttgtgctctgttgtgaagtcg 111993

                                                                          
Query: 496    aaaggtgtgtcctggacggacattatttctccggtgggaatcgtgttttcattgactgga 555
              ||||||||| ||| ||| | |||||| || ||||||||||||||||| || |  ||||||
Sbjct: 111994 aaaggtgtgcccttgacaggcattatctcaccggtgggaatcgtgttctcgtcaactgga 112053

                                                     
Query: 556    gtgatgtgttttgcccagatctggatcgaatgatccaag 594
              || ||||||||| ||||||||||||| ||||||||||||
Sbjct: 112054 gttatgtgttttccccagatctggattgaatgatccaag 112092
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  426 bits (215), Expect = e-116
 Identities = 398/459 (86%)
 Strand = Plus / Plus

                                                                           
Query: 136     gctgagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagac 195
               |||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||| || 
Sbjct: 3454850 gctgagaactcaaacagcatagtgtgcttatacttctcaccaggctgcaccaccacggag 3454909

                                                                           
Query: 196     gggaaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgca 255
               ||||||||||  |||||||||||||| || |||||||||||||||||||||||||| | |
Sbjct: 3454910 gggaaattgggttggttgatggcattaggaaacccctgggtttccaagcatactccggaa 3454969

                                                                           
Query: 256     tgcttcccgtaaacagctccgcctttgcccgtgatgccattcacatagttggcggtatag 315
               |||||||| ||||| || || |||||||| || | ||||| ||||||||| || || |||
Sbjct: 3454970 tgcttcccataaacggcaccacctttgccagttacgccatccacatagttagcagtgtag 3455029

                                                                           
Query: 316     aactgcatgccaggcgcatcggtccagaggtccagagtccgtgagctcgacgagtccttt 375
               |||||||| ||||| ||||| |||||||||||||| ||||||||| |||| || || || 
Sbjct: 3455030 aactgcattccaggtgcatcagtccagaggtccagggtccgtgagttcgatgaatctttc 3455089

                                                                           
Query: 376     agctttgctgcgtgcttcaggccattcttctcatcacccgagtccaacacatagttatga 435
               ||||| || || |||||||||||||||||||| || || ||||||| |||||||||||| 
Sbjct: 3455090 agcttggcagcatgcttcaggccattcttctcttcgccagagtccagcacatagttatgg 3455149

                                                                           
Query: 436     tcgtatcctccaggaacatcgttgatgcgatctccaatcctgtgctccgtggtgaaatcg 495
               || ||||||||||| ||||||||||||||  |||||||| ||||||| || ||||| |||
Sbjct: 3455150 tcatatcctccaggcacatcgttgatgcgggctccaatcttgtgctctgttgtgaagtcg 3455209

                                                                           
Query: 496     aaaggtgtgtcctggacggacattatttctccggtgggaatcgtgttttcattgactgga 555
               ||||||||| ||| ||| | |||||| || ||||||||||||||||| || |  ||||||
Sbjct: 3455210 aaaggtgtgcccttgacaggcattatctcaccggtgggaatcgtgttctcgtcaactgga 3455269

                                                      
Query: 556     gtgatgtgttttgcccagatctggatcgaatgatccaag 594
               || ||||||||| ||||||||||||| ||||||||||||
Sbjct: 3455270 gttatgtgttttccccagatctggattgaatgatccaag 3455308
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>dbj|AK061152.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-F01, full
            insert sequence
          Length = 1857

 Score =  426 bits (215), Expect = e-116
 Identities = 398/459 (86%)
 Strand = Plus / Minus

                                                                        
Query: 136  gctgagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagac 195
            |||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||| || 
Sbjct: 1604 gctgagaactcaaacagcatagtgtgcttatacttctcaccaggctgcaccaccacggag 1545

                                                                        
Query: 196  gggaaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgca 255
            ||||||||||  |||||||||||||| || |||||||||||||||||||||||||| | |
Sbjct: 1544 gggaaattgggttggttgatggcattaggaaacccctgggtttccaagcatactccggaa 1485

                                                                        
Query: 256  tgcttcccgtaaacagctccgcctttgcccgtgatgccattcacatagttggcggtatag 315
            |||||||| ||||| || || |||||||| || | ||||| ||||||||| || || |||
Sbjct: 1484 tgcttcccataaacggcaccacctttgccagttacgccatccacatagttagcagtgtag 1425

                                                                        
Query: 316  aactgcatgccaggcgcatcggtccagaggtccagagtccgtgagctcgacgagtccttt 375
            |||||||| ||||| ||||| |||||||||||||| ||||||||| |||| || || || 
Sbjct: 1424 aactgcattccaggtgcatcagtccagaggtccagggtccgtgagttcgatgaatctttc 1365

                                                                        
Query: 376  agctttgctgcgtgcttcaggccattcttctcatcacccgagtccaacacatagttatga 435
            ||||| || || |||||||||||||||||||| || || ||||||| |||||||||||| 
Sbjct: 1364 agcttggcagcatgcttcaggccattcttctcttcgccagagtccagcacatagttatgg 1305

                                                                        
Query: 436  tcgtatcctccaggaacatcgttgatgcgatctccaatcctgtgctccgtggtgaaatcg 495
            || ||||||||||| ||||||||||||||  |||||||| ||||||| || ||||| |||
Sbjct: 1304 tcatatcctccaggcacatcgttgatgcgggctccaatcttgtgctctgttgtgaagtcg 1245

                                                                        
Query: 496  aaaggtgtgtcctggacggacattatttctccggtgggaatcgtgttttcattgactgga 555
            ||||||||| ||| ||| | |||||| || ||||||||||||||||| || |  ||||||
Sbjct: 1244 aaaggtgtgcccttgacaggcattatctcaccggtgggaatcgtgttctcgtcaactgga 1185

                                                   
Query: 556  gtgatgtgttttgcccagatctggatcgaatgatccaag 594
            || ||||||||| ||||||||||||| ||||||||||||
Sbjct: 1184 gttatgtgttttccccagatctggattgaatgatccaag 1146
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  426 bits (215), Expect = e-116
 Identities = 398/459 (86%)
 Strand = Plus / Plus

                                                                           
Query: 136     gctgagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagac 195
               |||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||| || 
Sbjct: 3454771 gctgagaactcaaacagcatagtgtgcttatacttctcaccaggctgcaccaccacggag 3454830

                                                                           
Query: 196     gggaaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgca 255
               ||||||||||  |||||||||||||| || |||||||||||||||||||||||||| | |
Sbjct: 3454831 gggaaattgggttggttgatggcattaggaaacccctgggtttccaagcatactccggaa 3454890

                                                                           
Query: 256     tgcttcccgtaaacagctccgcctttgcccgtgatgccattcacatagttggcggtatag 315
               |||||||| ||||| || || |||||||| || | ||||| ||||||||| || || |||
Sbjct: 3454891 tgcttcccataaacggcaccacctttgccagttacgccatccacatagttagcagtgtag 3454950

                                                                           
Query: 316     aactgcatgccaggcgcatcggtccagaggtccagagtccgtgagctcgacgagtccttt 375
               |||||||| ||||| ||||| |||||||||||||| ||||||||| |||| || || || 
Sbjct: 3454951 aactgcattccaggtgcatcagtccagaggtccagggtccgtgagttcgatgaatctttc 3455010

                                                                           
Query: 376     agctttgctgcgtgcttcaggccattcttctcatcacccgagtccaacacatagttatga 435
               ||||| || || |||||||||||||||||||| || || ||||||| |||||||||||| 
Sbjct: 3455011 agcttggcagcatgcttcaggccattcttctcttcgccagagtccagcacatagttatgg 3455070

                                                                           
Query: 436     tcgtatcctccaggaacatcgttgatgcgatctccaatcctgtgctccgtggtgaaatcg 495
               || ||||||||||| ||||||||||||||  |||||||| ||||||| || ||||| |||
Sbjct: 3455071 tcatatcctccaggcacatcgttgatgcgggctccaatcttgtgctctgttgtgaagtcg 3455130

                                                                           
Query: 496     aaaggtgtgtcctggacggacattatttctccggtgggaatcgtgttttcattgactgga 555
               ||||||||| ||| ||| | |||||| || ||||||||||||||||| || |  ||||||
Sbjct: 3455131 aaaggtgtgcccttgacaggcattatctcaccggtgggaatcgtgttctcgtcaactgga 3455190

                                                      
Query: 556     gtgatgtgttttgcccagatctggatcgaatgatccaag 594
               || ||||||||| ||||||||||||| ||||||||||||
Sbjct: 3455191 gttatgtgttttccccagatctggattgaatgatccaag 3455229
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>gb|AY110655.1| Zea mays CL9117_1 mRNA sequence
          Length = 1124

 Score =  206 bits (104), Expect = 6e-50
 Identities = 356/440 (80%)
 Strand = Plus / Plus

                                                                       
Query: 139 gagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagacggg 198
           ||||| ||||||| ||| || |||||||||||| |||| ||| | || |||||||| || 
Sbjct: 135 gagaactcaaacagcatagtatgcttatacttctcaccgggccgaacaaccacagaggga 194

                                                                       
Query: 199 aaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgcatgc 258
           || |  | ||||||||||||||| |||||||||||||||| |||||| ||||| ||||||
Sbjct: 195 aactcaggctggttgatggcattcgggaacccctgggttttcaagcacactccagcatgc 254

                                                                       
Query: 259 ttcccgtaaacagctccgcctttgcccgtgatgccattcacatagttggcggtatagaac 318
           ||| |||| ||||| ||  | |||||   |||||||| ||| |||||||| || || | |
Sbjct: 255 ttcgcgtagacagcgcccgccttgccaccgatgccatccacgtagttggcagtgtacagc 314

                                                                       
Query: 319 tgcatgccaggcgcatcggtccagaggtccagagtccgtgagctcgacgagtcctttagc 378
           |||||||| || || || ||||| |||||||| |||||  |||||||||  || || |||
Sbjct: 315 tgcatgccgggtgcgtcagtccacaggtccagggtccgcaagctcgacggatctttcagc 374

                                                                       
Query: 379 tttgctgcgtgcttcaggccattcttctcatcacccgagtccaacacatagttatgatcg 438
            | || ||  |||||||||| | |||||| || ||  |||||| ||| ||||||||||| 
Sbjct: 375 ctggccgcacgcttcaggccgtccttctcgtcgccacagtccagcacgtagttatgatca 434

                                                                       
Query: 439 tatcctccaggaacatcgttgatgcgatctccaatcctgtgctccgtggtgaaatcgaaa 498
           || |||||||||||| ||| |||||| || ||||||||| ||||||| ||||| || |||
Sbjct: 435 taccctccaggaacaccgtcgatgcgctcgccaatcctgcgctccgtcgtgaagtcaaaa 494

                                                                       
Query: 499 ggtgtgtcctggacggacattatttctccggtgggaatcgtgttttcattgactggagtg 558
           || ||| | | ||||| |||||| || ||||||||||| ||||| || | ||| ||||||
Sbjct: 495 ggggtgccatcgacgggcattatctcgccggtgggaattgtgttctcgtcgaccggagtg 554

                               
Query: 559 atgtgttttgcccagatctg 578
           ||||| ||  ||||||||||
Sbjct: 555 atgtgcttgccccagatctg 574
to top
>ref|NM_112675.3| Arabidopsis thaliana aldose 1-epimerase AT3G17940 mRNA, complete cds
          Length = 1288

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Minus

                                                                        
Query: 136  gctgagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagac 195
            ||||| || ||||||| ||| ||||| || |||||| |||||| ||  ||||| ||||||
Sbjct: 1096 gctgaaaactcaaacagcatcgtgtgattgtacttctcaccagccttaaccacaacagac 1037

                                                                        
Query: 196  gggaaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgca 255
            |||||||| | |||||| || || || ||||| ||||| || || | ||| || || |||
Sbjct: 1036 gggaaattcgactggttaatcgcgttcgggaatccctgcgtctcaaggcacacacccgca 977

                          
Query: 256  tgcttcccgtaaac 269
            || |||||||||||
Sbjct: 976  tgtttcccgtaaac 963



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 416 agtccaacacatagttatgatcgtatcc 443
           |||||||||| |||||||||||||||||
Sbjct: 813 agtccaacacgtagttatgatcgtatcc 786



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 292 ccattcacatagttggcggtatagaactgcatgccaggcgcatcggtcca 341
           ||||||||||||||  ||||||| |||||||| || ||| ||| ||||||
Sbjct: 940 ccattcacatagttcccggtataaaactgcattcccggcacattggtcca 891
to top
>gb|AY039932.1| Arabidopsis thaliana putative aldose 1-epimerase (At3g17940) mRNA,
            complete cds
          Length = 1166

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Minus

                                                                        
Query: 136  gctgagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagac 195
            ||||| || ||||||| ||| ||||| || |||||| |||||| ||  ||||| ||||||
Sbjct: 1013 gctgaaaactcaaacagcatcgtgtgattgtacttctcaccagccttaaccacaacagac 954

                                                                        
Query: 196  gggaaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgca 255
            |||||||| | |||||| || || || ||||| ||||| || || | ||| || || |||
Sbjct: 953  gggaaattcgactggttaatcgcgttcgggaatccctgcgtctcaaggcacacacccgca 894

                          
Query: 256  tgcttcccgtaaac 269
            || |||||||||||
Sbjct: 893  tgtttcccgtaaac 880



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 416 agtccaacacatagttatgatcgtatcc 443
           |||||||||| |||||||||||||||||
Sbjct: 730 agtccaacacgtagttatgatcgtatcc 703



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 292 ccattcacatagttggcggtatagaactgcatgccaggcgcatcggtcca 341
           ||||||||||||||  ||||||| |||||||| || ||| ||| ||||||
Sbjct: 857 ccattcacatagttcccggtataaaactgcattcccggcacattggtcca 808
to top
>emb|BX824889.1|CNS0A6X7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH80ZB03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1180

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Minus

                                                                       
Query: 136 gctgagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagac 195
           ||||| || ||||||| ||| ||||| || |||||| |||||| ||  ||||| ||||||
Sbjct: 988 gctgaaaactcaaacagcatcgtgtgattgtacttctcaccagccttaaccacaacagac 929

                                                                       
Query: 196 gggaaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgca 255
           |||||||| | |||||| || || || ||||| ||||| || || | ||| || || |||
Sbjct: 928 gggaaattcgactggttaatcgcgttcgggaatccctgcgtctcaaggcacacacccgca 869

                         
Query: 256 tgcttcccgtaaac 269
           || |||||||||||
Sbjct: 868 tgtttcccgtaaac 855



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 416 agtccaacacatagttatgatcgtatcc 443
           |||||||||| |||||||||||||||||
Sbjct: 705 agtccaacacgtagttatgatcgtatcc 678



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 292 ccattcacatagttggcggtatagaactgcatgccaggcgcatcggtcca 341
           ||||||||||||||  ||||||| |||||||| || ||| ||| ||||||
Sbjct: 832 ccattcacatagttcccggtataaaactgcattcccggcacattggtcca 783
to top
>emb|BX822398.1|CNS0A708 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB34ZA02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1214

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Minus

                                                                        
Query: 136  gctgagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagac 195
            ||||| || ||||||| ||| ||||| || |||||| |||||| ||  ||||| ||||||
Sbjct: 1089 gctgaaaaatcaaacagcatcgtgtgattgtacttctcaccagccttaaccacaacagac 1030

                                                                        
Query: 196  gggaaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgca 255
            |||||||| | |||||| || || || ||||| ||||| || || | ||| || || |||
Sbjct: 1029 gggaaattagactggttaatcgcgttcgggaatccctgcgtctcaaggcacacacccgca 970

                          
Query: 256  tgcttcccgtaaac 269
            || |||||||||||
Sbjct: 969  tgtttcccgtaaac 956



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 416 agtccaacacatagttatgatcgtatcc 443
           |||||||||| |||||||||||||||||
Sbjct: 805 agtccaacacgtagttatgatcgtatcc 778
to top
>dbj|AB019230.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEB5
          Length = 74968

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                         
Query: 136   gctgagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagac 195
             ||||| || ||||||| ||| ||||| || |||||| |||||| ||  ||||| ||||||
Sbjct: 54265 gctgaaaactcaaacagcatcgtgtgattgtacttctcaccagccttaaccacaacagac 54324

                                                                         
Query: 196   gggaaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgca 255
             |||||||| | |||||| || || || ||||| ||||| || || | ||| || || |||
Sbjct: 54325 gggaaattcgactggttaatcgcgttcgggaatccctgcgtctcaaggcacacacccgca 54384

                           
Query: 256   tgcttcccgtaaac 269
             || |||||||||||
Sbjct: 54385 tgtttcccgtaaac 54398



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 416   agtccaacacatagttatgatcgtatcc 443
             |||||||||| |||||||||||||||||
Sbjct: 54548 agtccaacacgtagttatgatcgtatcc 54575



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 292   ccattcacatagttggcggtatagaactgcatgccaggcgcatcggtcca 341
             ||||||||||||||  ||||||| |||||||| || ||| ||| ||||||
Sbjct: 54421 ccattcacatagttcccggtataaaactgcattcccggcacattggtcca 54470
to top
>gb|BT001908.1| Arabidopsis thaliana clone C105464 putative aldose 1-epimerase
           (At3g17940) mRNA, complete cds
          Length = 1002

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Minus

                                                                       
Query: 136 gctgagaattcaaacaacatggtgtgcttatacttcgcaccaggctgcaccaccacagac 195
           ||||| || ||||||| ||| ||||| || |||||| |||||| ||  ||||| ||||||
Sbjct: 968 gctgaaaactcaaacagcatcgtgtgattgtacttctcaccagccttaaccacaacagac 909

                                                                       
Query: 196 gggaaattggtctggttgatggcattggggaacccctgggtttccaagcatactcctgca 255
           |||||||| | |||||| || || || ||||| ||||| || || | ||| || || |||
Sbjct: 908 gggaaattcgactggttaatcgcgttcgggaatccctgcgtctcaaggcacacacccgca 849

                         
Query: 256 tgcttcccgtaaac 269
           || |||||||||||
Sbjct: 848 tgtttcccgtaaac 835



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 416 agtccaacacatagttatgatcgtatcc 443
           |||||||||| |||||||||||||||||
Sbjct: 685 agtccaacacgtagttatgatcgtatcc 658



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 292 ccattcacatagttggcggtatagaactgcatgccaggcgcatcggtcca 341
           ||||||||||||||  ||||||| |||||||| || ||| ||| ||||||
Sbjct: 812 ccattcacatagttcccggtataaaactgcattcccggcacattggtcca 763
to top
>gb|DQ200393.1| Solanum tuberosum clone 069B08 unknown mRNA
          Length = 1218

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 255  atgcttcccgtaaacagctcc 275
            |||||||||||||||||||||
Sbjct: 1009 atgcttcccgtaaacagctcc 989
to top
>gb|AE009134.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 160 of
             256 of the complete sequence
          Length = 13735

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 388   tgcttcaggccattcttctca 408
             |||||||||||||||||||||
Sbjct: 10947 tgcttcaggccattcttctca 10927
to top
>ref|NM_006836.1| Homo sapiens GCN1 general control of amino-acid synthesis 1-like 1
            (yeast) (GCN1L1), mRNA
          Length = 8699

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 391  ttcaggccattcttctcatca 411
            |||||||||||||||||||||
Sbjct: 3387 ttcaggccattcttctcatca 3367
to top
>ref|XM_534701.2| PREDICTED: Canis familiaris similar to GCN1 general control of
            amino-acid synthesis 1-like 1, transcript variant 1
            (LOC477505), mRNA
          Length = 8666

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 391  ttcaggccattcttctcatca 411
            |||||||||||||||||||||
Sbjct: 3381 ttcaggccattcttctcatca 3361
to top
>emb|AL031737.2|HS8B22 Human DNA sequence from clone RP1-8B22 on chromosome 1p35.1-36.21
              Contains a dynein, cytoplasmic light chain 1 (DNCL1)
              pseudogene, complete sequence
          Length = 133760

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 391    ttcaggccattcttctcatca 411
              |||||||||||||||||||||
Sbjct: 106239 ttcaggccattcttctcatca 106219
to top
>dbj|D86973.2| Homo sapiens mRNA for KIAA0219 gene, partial cds
          Length = 8608

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 391  ttcaggccattcttctcatca 411
            |||||||||||||||||||||
Sbjct: 3387 ttcaggccattcttctcatca 3367
to top
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 388     tgcttcaggccattcttctca 408
               |||||||||||||||||||||
Sbjct: 1777117 tgcttcaggccattcttctca 1777097
to top
>dbj|AK090187.1| Mus musculus 15 days embryo brain cDNA, RIKEN full-length enriched
            library, clone:G630014H21 product:unclassifiable, full
            insert sequence
          Length = 2014

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 54   actcctttcttctggtcgttt 74
            |||||||||||||||||||||
Sbjct: 1180 actcctttcttctggtcgttt 1200
to top
>gb|AC004812.1|AC004812 Homo sapiens PAC clone 267D11 from 12, complete sequence
          Length = 138532

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 391    ttcaggccattcttctcatca 411
              |||||||||||||||||||||
Sbjct: 101710 ttcaggccattcttctcatca 101730
to top
>gb|U77700.1|HSU77700 Homo sapiens HsGCN1 mRNA, partial cds
          Length = 6085

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 391 ttcaggccattcttctcatca 411
           |||||||||||||||||||||
Sbjct: 852 ttcaggccattcttctcatca 832
to top
>ref|XM_633911.1| Dictyostelium discoideum hypothetical protein (DDB0185553), partial
            mRNA
          Length = 2850

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   ttctacaactactgcagttgcagc 105
            ||||||||||| ||||||||||||
Sbjct: 1038 ttctacaactagtgcagttgcagc 1061
to top
>ref|XM_616264.2| PREDICTED: Bos taurus similar to GCN1 general control of amino-acid
            synthesis 1-like 1 (LOC536143), mRNA
          Length = 8448

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 391  ttcaggccattcttctcatc 410
            ||||||||||||||||||||
Sbjct: 3608 ttcaggccattcttctcatc 3589
to top
>ref|XM_751098.1| Ustilago maydis 521 hypothetical protein (UM00044.1) partial mRNA
          Length = 1521

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 173 caccaggctgcaccaccacagacg 196
           |||||||||| |||||||||||||
Sbjct: 49  caccaggctggaccaccacagacg 26
to top
>gb|AY594294.1| Nicotiana benthamiana truncated actin 1 mRNA, partial cds
          Length = 876

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 407 catcacccgagtccaacaca 426
           ||||||||||||||||||||
Sbjct: 243 catcacccgagtccaacaca 224
to top
>emb|AL451074.13| Human DNA sequence from clone RP11-466F5 on chromosome 1 Contains the 3'
              end of the MGST3 gene for microsomal glutathione
              S-transferase 3, the ALDH9A1 gene for aldehyde
              dehydrogenase 9 family (member A1), a ribosomal protein S13
              (RPS13) pseudogene, a ribosomal protein L21 (RPL21)
              pseudogene, two novel genes (FLJ42974), a carbonic
              anhydrase XIV (CA14) pseudogene, the gene for putative
              membrane protein (LOC54499), a ribosomal protein L26
              (RPL26) pseudogene, the 5' end of (tbc), the 5' end of the
              UMPK gene for uridine monophosphate kinase and two CpG
              islands, complete sequence
          Length = 188217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 390    cttcaggccattcttctcat 409
              ||||||||||||||||||||
Sbjct: 125978 cttcaggccattcttctcat 125997
to top
>gb|AC116318.7| Mus musculus BAC clone RP23-80L14 from chromosome 1, complete sequence
          Length = 235490

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    catactcctgcatgcttccc 263
              ||||||||||||||||||||
Sbjct: 184656 catactcctgcatgcttccc 184675
to top
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    attggtctggttgatggcat 220
              ||||||||||||||||||||
Sbjct: 695636 attggtctggttgatggcat 695655
to top
>emb|AL080313.13|HSDJ448I9 Human DNA sequence from clone RP3-448I9 on chromosome 6 Contains two
             novel genes, complete sequence
          Length = 94371

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    ttgactcctttcttctggtc 70
             ||||||||||||||||||||
Sbjct: 77151 ttgactcctttcttctggtc 77132
to top
>emb|BX571658.1| Wolinella succinogenes, complete genome; segment 2/7
          Length = 346792

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 277   cctttgcccgtgatgccattcaca 300
             ||||||||||||||| ||||||||
Sbjct: 67842 cctttgcccgtgatggcattcaca 67819
to top
>emb|AJ287207.1|TPI287207 Thamnostylum piriforme partial act-1 gene for actin
          Length = 876

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 407 catcacccgagtccaacaca 426
           ||||||||||||||||||||
Sbjct: 211 catcacccgagtccaacaca 192
to top
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     acaactactgcagttgcagc 105
              ||||||||||||||||||||
Sbjct: 555518 acaactactgcagttgcagc 555537
to top
>gb|DP000030.1| Sus scrofa target 116 genomic scaffold
          Length = 380805

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 543    ttcattgactggagtgatgt 562
              ||||||||||||||||||||
Sbjct: 256402 ttcattgactggagtgatgt 256383
to top
>emb|AL928622.9| Zebrafish DNA sequence from clone DKEY-31O13, complete sequence
          Length = 230557

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tcgttttattccattctaca 88
             ||||||||||||||||||||
Sbjct: 48525 tcgttttattccattctaca 48544
to top
>gb|AC129557.10| Mus musculus chromosome 19, clone RP24-245F23, complete sequence
          Length = 174415

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 548   tgactggagtgatgtgtttt 567
             ||||||||||||||||||||
Sbjct: 97061 tgactggagtgatgtgtttt 97042
to top
>gb|AC131797.3| Mus musculus BAC clone RP24-496C20 from 1, complete sequence
          Length = 139995

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  catactcctgcatgcttccc 263
            ||||||||||||||||||||
Sbjct: 6331 catactcctgcatgcttccc 6350


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,414,903
Number of Sequences: 3902068
Number of extensions: 4414903
Number of successful extensions: 86666
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86527
Number of HSP's gapped (non-prelim): 137
length of query: 594
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 571
effective length of database: 17,143,297,704
effective search space: 9788822988984
effective search space used: 9788822988984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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