>VATB1_HORVU (Q40078) Vacuolar ATP synthase subunit B isoform 1 (EC 3.6.3.14)|
           (V-ATPase B subunit 1) (Vacuolar proton pump B subunit
           1)
          Length = 488

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = -3

Query: 288 RIPAKTLDAFYSRDAAH 238
           RIPAKTLDAFYSRDAAH
Sbjct: 472 RIPAKTLDAFYSRDAAH 488

>VATB2_HORVU (Q40079) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14)|
           (V-ATPase B subunit 2) (Vacuolar proton pump B subunit
           2)
          Length = 483

 Score = 35.0 bits (79), Expect = 0.049
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -3

Query: 288 RIPAKTLDAFYSRDAAH 238
           RIPAKTLD FYSRDA H
Sbjct: 467 RIPAKTLDQFYSRDATH 483

>VATB2_GOSHI (Q43433) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14)|
           (V-ATPase B subunit 2) (Vacuolar proton pump B subunit
           2) (Fragment)
          Length = 386

 Score = 32.7 bits (73), Expect = 0.24
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = -3

Query: 288 RIPAKTLDAFYSRDAAH 238
           RIPAKTLD +YSRDAA+
Sbjct: 370 RIPAKTLDQYYSRDAAN 386

>VATB_ARATH (P11574) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B|
           subunit) (Vacuolar proton pump B subunit) (V-ATPase 57
           kDa subunit)
          Length = 486

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = -3

Query: 288 RIPAKTLDAFYSRDA 244
           RIPAKTLD FYSRD+
Sbjct: 470 RIPAKTLDQFYSRDS 484

>VATB1_GOSHI (Q43432) Vacuolar ATP synthase subunit B isoform 1 (EC 3.6.3.14)|
           (V-ATPase B subunit 1) (Vacuolar proton pump B subunit
           1)
          Length = 488

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 288 RIPAKTLDAFYSRDAAH 238
           RIPAKT D +YSRDA +
Sbjct: 472 RIPAKTHDQYYSRDAGN 488


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,412,318
Number of Sequences: 219361
Number of extensions: 388423
Number of successful extensions: 775
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)