Clone Information

BLAST Search Result

Clone Name	rbah60o07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK099198.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	496	e-137
2	dbj\|AK061133.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	496	e-137
3	ref\|NM_188103.1\| Oryza sativa (japonica cultivar-group), Ozsa853...	490	e-135
4	gb\|AY110867.1\| Zea mays CL34559_1 mRNA sequence	450	e-123
5	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	301	1e-78
6	dbj\|AP001072.1\| Oryza sativa (japonica cultivar-group) genomic D...	301	1e-78
7	dbj\|AP000836.1\| Oryza sativa (japonica cultivar-group) genomic D...	301	1e-78
8	gb\|AC091627.2\| Solanum demissum chromosome 11 BAC PGEC513 genomi...	94	6e-16
9	ref\|NM_122115.1\| Arabidopsis thaliana unknown protein AT5G21070 ...	78	4e-11
10	gb\|AY079115.1\| Arabidopsis thaliana AT5g21070/T10F18_100 mRNA, c...	78	4e-11
11	gb\|AY054240.1\| Arabidopsis thaliana AT5g21070/T10F18_100 mRNA, c...	78	4e-11
12	emb\|BX829568.1\|CNS0A04I Arabidopsis thaliana Full-length cDNA Co...	78	4e-11
13	gb\|AY087593.1\| Arabidopsis thaliana clone 3689 mRNA, complete se...	78	4e-11
14	gb\|AC069325.6\|AC069325 Genomic Sequence For Arabidopsis thaliana...	54	5e-04
15	emb\|CR931734.2\| Medicago truncatula chromosome 5 clone mth2-62m2...	52	0.002
16	gb\|AC112506.5\| Homo sapiens 3 BAC RP11-286P15 (Roswell Park Canc...	44	0.53
17	gb\|AC012215.11\| Homo sapiens chromosome , clone RP11-345N15, com...	44	0.53
18	gb\|AC083838.6\| Homo sapiens chromosome 8, clone RP11-42L4, compl...	44	0.53
19	gb\|AC120534.5\| Oryza sativa (japonica cultivar-group) chromosome...	42	2.1
20	gb\|AC138401.9\| Mus musculus chromosome 13, clone RP24-79G5, comp...	42	2.1
21	gb\|AC121936.2\| Mus musculus BAC clone RP24-207J5 from 13, comple...	42	2.1
22	gb\|AC093277.3\| Homo sapiens chromosome 5 clone RP11-386E5, compl...	42	2.1
23	gb\|AC114977.2\| Homo sapiens chromosome 5 clone RP11-49C20, compl...	42	2.1
24	gb\|AY224425.1\| Oryza sativa (japonica cultivar-group) isolate 20...	42	2.1
25	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.1
26	gb\|AC016950.8\|AC016950 Homo sapiens 3 BAC RP11-239I11 (Roswell P...	42	2.1
27	dbj\|AK099600.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.1
28	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	42	2.1
29	gb\|AC153889.19\| Mus musculus 10 BAC RP23-434A12 (Roswell Park Ca...	40	8.3
30	ref\|XM_550090.1\| Oryza sativa (japonica cultivar-group), mRNA	40	8.3
31	gb\|AC167202.8\| Mus musculus BAC RP24-243A15 (Roswell Park Cance...	40	8.3
32	gb\|AC127369.4\| Mus musculus BAC clone RP23-26A15 from 8, complet...	40	8.3
33	emb\|AL158073.10\| Human DNA sequence from clone RP11-323A7 on chr...	40	8.3
34	emb\|AL663022.4\|OSJN00222 Oryza sativa genomic DNA, chromosome 4,...	40	8.3
35	emb\|AL731634.4\|OSJN00276 Oryza sativa genomic DNA, chromosome 4,...	40	8.3
36	gb\|AC106038.3\| Homo sapiens chromosome 8, clone RP11-68L18, comp...	40	8.3
37	gb\|AC093329.6\| Homo sapiens chromosome 8, clone RP11-662G23, com...	40	8.3
38	gb\|AC068510.8\| Homo sapiens chromosome 8, clone RP11-662E23, com...	40	8.3
39	gb\|AC174742.8\| Mus musculus BAC RP24-258O12 (Roswell Park Cance...	40	8.3
40	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.3
41	gb\|AC098823.3\| Homo sapiens BAC clone RP11-420E18 from 2, comple...	40	8.3
42	gb\|AF343884.1\| Phalanger sericeus NADH dehydrogenase subunit 2 (...	40	8.3
43	dbj\|AP002483.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.3
44	dbj\|AK066922.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	8.3
45	gb\|AC172027.4\| Mus musculus BAC RP24-219P17 (Roswell Park Cance...	40	8.3
46	emb\|CR382128.1\| Yarrowia lipolytica chromosome B of strain CLIB1...	40	8.3
47	gb\|AC171183.6\| Mus musculus BAC RP24-545B2 (Roswell Park Cancer...	40	8.3
48	emb\|AL627259.8\| Mouse DNA sequence from clone RP23-399H3 on chro...	40	8.3

>dbj|AK099198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115B14, full
           insert sequence
          Length = 1057

 Score =  496 bits (250), Expect = e-137
 Identities = 421/478 (88%)
 Strand = Plus / Minus

                                                                       
Query: 130 acccacaagtttcctatgcacgtgtgcatggagagaatgctggtcaccatcatggtgatg 189
           |||||| |||||||  ||||||||| |||||||||| || | ||| || |||||||||||
Sbjct: 786 acccacgagtttccggtgcacgtgttcatggagagagtgttcgtcgccgtcatggtgatg 727

                                                                       
Query: 190 gaacacatatgtcagaaccccaacaaggcacagcaccgagccaactaggaccttgtcata 249
           ||| || ||||||| ||||||||| |||||||| |||||||| || |||| |||||| ||
Sbjct: 726 gaatacgtatgtcaaaaccccaacgaggcacaggaccgagccgacaaggatcttgtcgta 667

                                                                       
Query: 250 gcgttccacccagtgaaacttgatctggctagcaccataaaatgagagggccaccaggga 309
            |||||||||||||| ||||| |||||||||||||| || |||||||||||||||| |||
Sbjct: 666 acgttccacccagtggaacttaatctggctagcaccgtagaatgagagggccaccaagga 607

                                                                       
Query: 310 cgtcatcactgtgatggtactgaagagaagtacaatgattgcaagaaacatcatcgagga 369
            |||||||||||||||||||| ||||| || |||||||| ||||| | |||||| |||||
Sbjct: 606 tgtcatcactgtgatggtactaaagaggagcacaatgatcgcaaggatcatcatggagga 547

                                                                       
Query: 370 tgagttgccaacagcaagaaacactggaagagtagttgcacagggtgataatgctggtac 429
           ||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 546 tgaattgccaacagcaagaaacactggaagagttgttgcacagggtgataatgcaggtac 487

                                                                       
Query: 430 aagtacaagaccagcgactgccatcttctccattggatgattatgagcatggctatgacc 489
           |||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 486 aagtacaagacctgcaactgccatcttctccattggatgattatgagcatggccatggcc 427

                                                                       
Query: 490 cccttttcctaacacaaacaacagaatgtaacctgctccaagaaatattagcaacagcga 549
            |||||||| |   |||||| ||| || |||| | | |||||||  || |||||||| ||
Sbjct: 426 accttttcccagtgcaaacagcaggatataacttccaccaagaacaatcagcaacagtga 367

                                                                     
Query: 550 ggcaagtttatgcactgtttcctcgcccgctatagtatttgccatagtaactgcagtt 607
            |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 366 tgcaagtttatgcactgtttcctcgcctgctatagtatttgccatagtaacagcagtt 309

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>dbj|AK061133.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-A12, full
           insert sequence
          Length = 1132

 Score =  496 bits (250), Expect = e-137
 Identities = 421/478 (88%)
 Strand = Plus / Minus

                                                                       
Query: 130 acccacaagtttcctatgcacgtgtgcatggagagaatgctggtcaccatcatggtgatg 189
           |||||| |||||||  ||||||||| |||||||||| || | ||| || |||||||||||
Sbjct: 786 acccacgagtttccggtgcacgtgttcatggagagagtgttcgtcgccgtcatggtgatg 727

                                                                       
Query: 190 gaacacatatgtcagaaccccaacaaggcacagcaccgagccaactaggaccttgtcata 249
           ||| || ||||||| ||||||||| |||||||| |||||||| || |||| |||||| ||
Sbjct: 726 gaatacgtatgtcaaaaccccaacgaggcacaggaccgagccgacaaggatcttgtcgta 667

                                                                       
Query: 250 gcgttccacccagtgaaacttgatctggctagcaccataaaatgagagggccaccaggga 309
            |||||||||||||| ||||| |||||||||||||| || |||||||||||||||| |||
Sbjct: 666 acgttccacccagtggaacttaatctggctagcaccgtagaatgagagggccaccaagga 607

                                                                       
Query: 310 cgtcatcactgtgatggtactgaagagaagtacaatgattgcaagaaacatcatcgagga 369
            |||||||||||||||||||| ||||| || |||||||| ||||| | |||||| |||||
Sbjct: 606 tgtcatcactgtgatggtactaaagaggagcacaatgatcgcaaggatcatcatggagga 547

                                                                       
Query: 370 tgagttgccaacagcaagaaacactggaagagtagttgcacagggtgataatgctggtac 429
           ||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 546 tgaattgccaacagcaagaaacactggaagagttgttgcacagggtgataatgcaggtac 487

                                                                       
Query: 430 aagtacaagaccagcgactgccatcttctccattggatgattatgagcatggctatgacc 489
           |||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 486 aagtacaagacctgcaactgccatcttctccattggatgattatgagcatggccatggcc 427

                                                                       
Query: 490 cccttttcctaacacaaacaacagaatgtaacctgctccaagaaatattagcaacagcga 549
            |||||||| |   |||||| ||| || |||| | | |||||||  || |||||||| ||
Sbjct: 426 accttttcccagtgcaaacagcaggatataacttccaccaagaacaatcagcaacagtga 367

                                                                     
Query: 550 ggcaagtttatgcactgtttcctcgcccgctatagtatttgccatagtaactgcagtt 607
            |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 366 tgcaagtttatgcactgtttcctcgcctgctatagtatttgccatagtaacagcagtt 309

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>ref|NM_188103.1| Oryza sativa (japonica cultivar-group), Ozsa8535 predicted mRNA
          Length = 1425

 Score =  490 bits (247), Expect = e-135
 Identities = 415/471 (88%)
 Strand = Plus / Minus

                                                                       
Query: 137 agtttcctatgcacgtgtgcatggagagaatgctggtcaccatcatggtgatggaacaca 196
           |||||||  ||||||||| |||||||||| || | ||| || |||||||||||||| || 
Sbjct: 812 agtttccggtgcacgtgttcatggagagagtgttcgtcgccgtcatggtgatggaatacg 753

                                                                       
Query: 197 tatgtcagaaccccaacaaggcacagcaccgagccaactaggaccttgtcatagcgttcc 256
           ||||||| ||||||||| |||||||| |||||||| || |||| |||||| || ||||||
Sbjct: 752 tatgtcaaaaccccaacgaggcacaggaccgagccgacaaggatcttgtcgtaacgttcc 693

                                                                       
Query: 257 acccagtgaaacttgatctggctagcaccataaaatgagagggccaccagggacgtcatc 316
           |||||||| ||||| |||||||||||||| || |||||||||||||||| ||| ||||||
Sbjct: 692 acccagtggaacttaatctggctagcaccgtagaatgagagggccaccaaggatgtcatc 633

                                                                       
Query: 317 actgtgatggtactgaagagaagtacaatgattgcaagaaacatcatcgaggatgagttg 376
           |||||||||||||| ||||| || |||||||| ||||| | |||||| |||||||| |||
Sbjct: 632 actgtgatggtactaaagaggagcacaatgatcgcaaggatcatcatggaggatgaattg 573

                                                                       
Query: 377 ccaacagcaagaaacactggaagagtagttgcacagggtgataatgctggtacaagtaca 436
           |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 572 ccaacagcaagaaacactggaagagttgttgcacagggtgataatgcaggtacaagtaca 513

                                                                       
Query: 437 agaccagcgactgccatcttctccattggatgattatgagcatggctatgaccccctttt 496
           ||||| || ||||||||||||||||||||||||||||||||||||| ||| || ||||||
Sbjct: 512 agacctgcaactgccatcttctccattggatgattatgagcatggccatggccacctttt 453

                                                                       
Query: 497 cctaacacaaacaacagaatgtaacctgctccaagaaatattagcaacagcgaggcaagt 556
           || |   |||||| ||| || |||| | | |||||||  || |||||||| || ||||||
Sbjct: 452 cccagtgcaaacagcaggatataacttccaccaagaacaatcagcaacagtgatgcaagt 393

                                                              
Query: 557 ttatgcactgtttcctcgcccgctatagtatttgccatagtaactgcagtt 607
           |||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 392 ttatgcactgtttcctcgcctgctatagtatttgccatagtaacagcagtt 342

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>gb|AY110867.1| Zea mays CL34559_1 mRNA sequence
          Length = 652

 Score =  450 bits (227), Expect = e-123
 Identities = 379/435 (87%)
 Strand = Plus / Minus

                                                                       
Query: 173 tcaccatcatggtgatggaacacatatgtcagaaccccaacaaggcacagcaccgagcca 232
           |||||||| || ||||||||||||||||| |  || ||||||||||||||||||| ||| 
Sbjct: 493 tcaccatcgtgatgatggaacacatatgttaagactccaacaaggcacagcaccgtgccg 434

                                                                       
Query: 233 actaggaccttgtcatagcgttccacccagtgaaacttgatctggctagcaccataaaat 292
           || |||| |||||| || || ||||||||||| |||||||||||||||||||| || |||
Sbjct: 433 acgaggatcttgtcgtaacgctccacccagtggaacttgatctggctagcaccgtagaat 374

                                                                       
Query: 293 gagagggccaccagggacgtcatcactgtgatggtactgaagagaagtacaatgattgca 352
           || |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 373 gaaagggccaccaaggatgtcatcactgtgatggtgctgaagaggagcacaatgattgca 314

                                                                       
Query: 353 agaaacatcatcgaggatgagttgccaacagcaagaaacactggaagagtagttgcacag 412
           |||| |||||| ||||| |||||||||||||||||     |||||||||| |||||||| 
Sbjct: 313 agaatcatcattgaggaagagttgccaacagcaagnnnnnctggaagagttgttgcacaa 254

                                                                       
Query: 413 ggtgataatgctggtacaagtacaagaccagcgactgccatcttctccattggatgatta 472
           ||||||||||| ||||||||||||||||| ||||||||||      ||||||||||||||
Sbjct: 253 ggtgataatgcaggtacaagtacaagaccggcgactgccannnnnnccattggatgatta 194

                                                                       
Query: 473 tgagcatggctatgacccccttttcctaacacaaacaacagaatgtaacctgctccaaga 532
           || |||||||||||||| |||||||||||  ||||||| || || |||| ||||||||| 
Sbjct: 193 tgggcatggctatgaccaccttttcctaaggcaaacaagaggatataacttgctccaagn 134

                                                                       
Query: 533 aatattagcaacagcgaggcaagtttatgcactgtttcctcgcccgctatagtatttgcc 592
               | |||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 133 nnnntcagcaacagcgaggcaagtttatgcactgtttcttcgccagctatagtatttgcc 74

                          
Query: 593 atagtaactgcagtt 607
           |||||||||||||||
Sbjct: 73  atagtaactgcagtt 59

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  301 bits (152), Expect = 1e-78
 Identities = 245/276 (88%)
 Strand = Plus / Minus

                                                                           
Query: 332     aagagaagtacaatgattgcaagaaacatcatcgaggatgagttgccaacagcaagaaac 391
               ||||| || |||||||| ||||| | |||||| |||||||| ||||||||||||||||||
Sbjct: 9751107 aagaggagcacaatgatcgcaaggatcatcatggaggatgaattgccaacagcaagaaac 9751048

                                                                           
Query: 392     actggaagagtagttgcacagggtgataatgctggtacaagtacaagaccagcgactgcc 451
               ||||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 9751047 actggaagagttgttgcacagggtgataatgcaggtacaagtacaagacctgcaactgcc 9750988

                                                                           
Query: 452     atcttctccattggatgattatgagcatggctatgacccccttttcctaacacaaacaac 511
               ||||||||||||||||||||||||||||||| ||| || |||||||| |   |||||| |
Sbjct: 9750987 atcttctccattggatgattatgagcatggccatggccaccttttcccagtgcaaacagc 9750928

                                                                           
Query: 512     agaatgtaacctgctccaagaaatattagcaacagcgaggcaagtttatgcactgtttcc 571
               || || |||| | | |||||||  || |||||||| || |||||||||||||||||||||
Sbjct: 9750927 aggatataacttccaccaagaacaatcagcaacagtgatgcaagtttatgcactgtttcc 9750868

                                                   
Query: 572     tcgcccgctatagtatttgccatagtaactgcagtt 607
               ||||| ||||||||||||||||||||||| ||||||
Sbjct: 9750867 tcgcctgctatagtatttgccatagtaacagcagtt 9750832



 Score =  202 bits (102), Expect = 1e-48
 Identities = 177/202 (87%)
 Strand = Plus / Minus

                                                                           
Query: 130     acccacaagtttcctatgcacgtgtgcatggagagaatgctggtcaccatcatggtgatg 189
               |||||| |||||||  ||||||||| |||||||||| || | ||| || |||||||||||
Sbjct: 9752369 acccacgagtttccggtgcacgtgttcatggagagagtgttcgtcgccgtcatggtgatg 9752310

                                                                           
Query: 190     gaacacatatgtcagaaccccaacaaggcacagcaccgagccaactaggaccttgtcata 249
               ||| || ||||||| ||||||||| |||||||| |||||||| || |||| |||||| ||
Sbjct: 9752309 gaatacgtatgtcaaaaccccaacgaggcacaggaccgagccgacaaggatcttgtcgta 9752250

                                                                           
Query: 250     gcgttccacccagtgaaacttgatctggctagcaccataaaatgagagggccaccaggga 309
                |||||||||||||| ||||| |||||||||||||| || |||||||||||||||| |||
Sbjct: 9752249 acgttccacccagtggaacttaatctggctagcaccgtagaatgagagggccaccaagga 9752190

                                     
Query: 310     cgtcatcactgtgatggtactg 331
                |||||||||||||||||||||
Sbjct: 9752189 tgtcatcactgtgatggtactg 9752168



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 176     ccatcatggtgatggaacac 195
               ||||||||||||||||||||
Sbjct: 2249296 ccatcatggtgatggaacac 2249315

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>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0025D05
          Length = 145684

 Score =  301 bits (152), Expect = 1e-78
 Identities = 245/276 (88%)
 Strand = Plus / Minus

                                                                         
Query: 332   aagagaagtacaatgattgcaagaaacatcatcgaggatgagttgccaacagcaagaaac 391
             ||||| || |||||||| ||||| | |||||| |||||||| ||||||||||||||||||
Sbjct: 15357 aagaggagcacaatgatcgcaaggatcatcatggaggatgaattgccaacagcaagaaac 15298

                                                                         
Query: 392   actggaagagtagttgcacagggtgataatgctggtacaagtacaagaccagcgactgcc 451
             ||||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 15297 actggaagagttgttgcacagggtgataatgcaggtacaagtacaagacctgcaactgcc 15238

                                                                         
Query: 452   atcttctccattggatgattatgagcatggctatgacccccttttcctaacacaaacaac 511
             ||||||||||||||||||||||||||||||| ||| || |||||||| |   |||||| |
Sbjct: 15237 atcttctccattggatgattatgagcatggccatggccaccttttcccagtgcaaacagc 15178

                                                                         
Query: 512   agaatgtaacctgctccaagaaatattagcaacagcgaggcaagtttatgcactgtttcc 571
             || || |||| | | |||||||  || |||||||| || |||||||||||||||||||||
Sbjct: 15177 aggatataacttccaccaagaacaatcagcaacagtgatgcaagtttatgcactgtttcc 15118

                                                 
Query: 572   tcgcccgctatagtatttgccatagtaactgcagtt 607
             ||||| ||||||||||||||||||||||| ||||||
Sbjct: 15117 tcgcctgctatagtatttgccatagtaacagcagtt 15082



 Score =  202 bits (102), Expect = 1e-48
 Identities = 177/202 (87%)
 Strand = Plus / Minus

                                                                         
Query: 130   acccacaagtttcctatgcacgtgtgcatggagagaatgctggtcaccatcatggtgatg 189
             |||||| |||||||  ||||||||| |||||||||| || | ||| || |||||||||||
Sbjct: 16619 acccacgagtttccggtgcacgtgttcatggagagagtgttcgtcgccgtcatggtgatg 16560

                                                                         
Query: 190   gaacacatatgtcagaaccccaacaaggcacagcaccgagccaactaggaccttgtcata 249
             ||| || ||||||| ||||||||| |||||||| |||||||| || |||| |||||| ||
Sbjct: 16559 gaatacgtatgtcaaaaccccaacgaggcacaggaccgagccgacaaggatcttgtcgta 16500

                                                                         
Query: 250   gcgttccacccagtgaaacttgatctggctagcaccataaaatgagagggccaccaggga 309
              |||||||||||||| ||||| |||||||||||||| || |||||||||||||||| |||
Sbjct: 16499 acgttccacccagtggaacttaatctggctagcaccgtagaatgagagggccaccaagga 16440

                                   
Query: 310   cgtcatcactgtgatggtactg 331
              |||||||||||||||||||||
Sbjct: 16439 tgtcatcactgtgatggtactg 16418

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>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0038F12
          Length = 190014

 Score =  301 bits (152), Expect = 1e-78
 Identities = 245/276 (88%)
 Strand = Plus / Minus

                                                                          
Query: 332    aagagaagtacaatgattgcaagaaacatcatcgaggatgagttgccaacagcaagaaac 391
              ||||| || |||||||| ||||| | |||||| |||||||| ||||||||||||||||||
Sbjct: 189110 aagaggagcacaatgatcgcaaggatcatcatggaggatgaattgccaacagcaagaaac 189051

                                                                          
Query: 392    actggaagagtagttgcacagggtgataatgctggtacaagtacaagaccagcgactgcc 451
              ||||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 189050 actggaagagttgttgcacagggtgataatgcaggtacaagtacaagacctgcaactgcc 188991

                                                                          
Query: 452    atcttctccattggatgattatgagcatggctatgacccccttttcctaacacaaacaac 511
              ||||||||||||||||||||||||||||||| ||| || |||||||| |   |||||| |
Sbjct: 188990 atcttctccattggatgattatgagcatggccatggccaccttttcccagtgcaaacagc 188931

                                                                          
Query: 512    agaatgtaacctgctccaagaaatattagcaacagcgaggcaagtttatgcactgtttcc 571
              || || |||| | | |||||||  || |||||||| || |||||||||||||||||||||
Sbjct: 188930 aggatataacttccaccaagaacaatcagcaacagtgatgcaagtttatgcactgtttcc 188871

                                                  
Query: 572    tcgcccgctatagtatttgccatagtaactgcagtt 607
              ||||| ||||||||||||||||||||||| ||||||
Sbjct: 188870 tcgcctgctatagtatttgccatagtaacagcagtt 188835

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>gb|AC091627.2| Solanum demissum chromosome 11 BAC PGEC513 genomic sequence, complete
             sequence
          Length = 77821

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 128/155 (82%)
 Strand = Plus / Minus

                                                                         
Query: 344   atgattgcaagaaacatcatcgaggatgagttgccaacagcaagaaacactggaagagta 403
             ||||| ||||| | |||||| ||||||||||| ||||||||||||||||| || ||||| 
Sbjct: 16107 atgatggcaagcaccatcatggaggatgagtttccaacagcaagaaacacagggagagtg 16048

                                                                         
Query: 404   gttgcacagggtgataatgctggtacaagtacaagaccagcgactgccatcttctccatt 463
             |||||||| || || ||||| || ||||| ||||| || || || ||||| |||||||| 
Sbjct: 16047 gttgcacaaggagacaatgcaggaacaaggacaagccctgctacggccattttctccatg 15988

                                                
Query: 464   ggatgattatgagcatggctatgacccccttttcc 498
             || ||||| || | |||||| ||||| || |||||
Sbjct: 15987 ggttgattgtgtgaatggctgtgaccaccctttcc 15953



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                         
Query: 236   aggaccttgtcatagcgttccacccagtgaaacttgatctggctagcaccataaaatgag 295
             |||| ||||||||| | |||||||||||| |||||||  || || ||||| |||||||| 
Sbjct: 17014 aggagcttgtcataacattccacccagtggaacttgagttgacttgcaccgtaaaatgat 16955

                                             
Query: 296   agggccaccagggacgtcatcactgtgatggt 327
             || |||||||| || |||||||| || |||||
Sbjct: 16954 agagccaccagtgaggtcatcacagttatggt 16923

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>ref|NM_122115.1| Arabidopsis thaliana unknown protein AT5G21070 mRNA, complete cds
          Length = 1137

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 177/223 (79%)
 Strand = Plus / Minus

                                                                       
Query: 254 tccacccagtgaaacttgatctggctagcaccataaaatgagagggccaccagggacgtc 313
           ||||||||||||||||||| |||||| |||||||| || || || || ||||| || |||
Sbjct: 734 tccacccagtgaaacttgagctggcttgcaccatagaacgatagagcaaccagcgatgtc 675

                                                                       
Query: 314 atcactgtgatggtactgaagagaagtacaatgattgcaagaaacatcatcgaggatgag 373
           || ||    ||||| |||||||| || || ||||| || |||| |||||| ||    || 
Sbjct: 674 ataaccaatatggtgctgaagagcagaactatgatggcgagaaccatcatggacttggaa 615

                                                                       
Query: 374 ttgccaacagcaagaaacactggaagagtagttgcacagggtgataatgctggtacaagt 433
           || |||||||| || || || || ||||| |||||||| || |||||||| || ||||| 
Sbjct: 614 tttccaacagcgaggaaaaccgggagagttgttgcacaaggagataatgcaggaacaagg 555

                                                      
Query: 434 acaagaccagcgactgccatcttctccattggatgattatgag 476
           ||||| ||||| || ||||| |||||||| || || |||||||
Sbjct: 554 acaagtccagcaacagccattttctccatgggttggttatgag 512

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>gb|AY079115.1| Arabidopsis thaliana AT5g21070/T10F18_100 mRNA, complete cds
          Length = 678

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 177/223 (79%)
 Strand = Plus / Minus

                                                                       
Query: 254 tccacccagtgaaacttgatctggctagcaccataaaatgagagggccaccagggacgtc 313
           ||||||||||||||||||| |||||| |||||||| || || || || ||||| || |||
Sbjct: 551 tccacccagtgaaacttgagctggcttgcaccatagaacgatagagcaaccagcgatgtc 492

                                                                       
Query: 314 atcactgtgatggtactgaagagaagtacaatgattgcaagaaacatcatcgaggatgag 373
           || ||    ||||| |||||||| || || ||||| || |||| |||||| ||    || 
Sbjct: 491 ataaccaatatggtgctgaagagcagaactatgatggcgagaaccatcatggacttggaa 432

                                                                       
Query: 374 ttgccaacagcaagaaacactggaagagtagttgcacagggtgataatgctggtacaagt 433
           || |||||||| || || || || ||||| |||||||| || |||||||| || ||||| 
Sbjct: 431 tttccaacagcgaggaaaaccgggagagttgttgcacaaggagataatgcaggaacaagg 372

                                                      
Query: 434 acaagaccagcgactgccatcttctccattggatgattatgag 476
           ||||| ||||| || ||||| |||||||| || || |||||||
Sbjct: 371 acaagtccagcaacagccattttctccatgggttggttatgag 329

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>gb|AY054240.1| Arabidopsis thaliana AT5g21070/T10F18_100 mRNA, complete cds
          Length = 1040

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 177/223 (79%)
 Strand = Plus / Minus

                                                                       
Query: 254 tccacccagtgaaacttgatctggctagcaccataaaatgagagggccaccagggacgtc 313
           ||||||||||||||||||| |||||| |||||||| || || || || ||||| || |||
Sbjct: 732 tccacccagtgaaacttgagctggcttgcaccatagaacgatagagcaaccagcgatgtc 673

                                                                       
Query: 314 atcactgtgatggtactgaagagaagtacaatgattgcaagaaacatcatcgaggatgag 373
           || ||    ||||| |||||||| || || ||||| || |||| |||||| ||    || 
Sbjct: 672 ataaccaatatggtgctgaagagcagaactatgatggcgagaaccatcatggacttggaa 613

                                                                       
Query: 374 ttgccaacagcaagaaacactggaagagtagttgcacagggtgataatgctggtacaagt 433
           || |||||||| || || || || ||||| |||||||| || |||||||| || ||||| 
Sbjct: 612 tttccaacagcgaggaaaaccgggagagttgttgcacaaggagataatgcaggaacaagg 553

                                                      
Query: 434 acaagaccagcgactgccatcttctccattggatgattatgag 476
           ||||| ||||| || ||||| |||||||| || || |||||||
Sbjct: 552 acaagtccagcaacagccattttctccatgggttggttatgag 510

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>emb|BX829568.1|CNS0A04I Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZF03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1092

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 177/223 (79%)
 Strand = Plus / Minus

                                                                       
Query: 254 tccacccagtgaaacttgatctggctagcaccataaaatgagagggccaccagggacgtc 313
           ||||||||||||||||||| |||||| |||||||| || || || || ||||| || |||
Sbjct: 716 tccacccagtgaaacttgagctggcttgcaccatagaacgatagagcaaccagcgatgtc 657

                                                                       
Query: 314 atcactgtgatggtactgaagagaagtacaatgattgcaagaaacatcatcgaggatgag 373
           || ||    ||||| |||||||| || || ||||| || |||| |||||| ||    || 
Sbjct: 656 ataaccaatatggtgctgaagagcagaactatgatggcgagaaccatcatggacttggaa 597

                                                                       
Query: 374 ttgccaacagcaagaaacactggaagagtagttgcacagggtgataatgctggtacaagt 433
           || |||||||| || || || || ||||| |||||||| || |||||||| || ||||| 
Sbjct: 596 tttccaacagcgaggaaaaccgggagagttgttgcacaaggagataatgcaggaacaagg 537

                                                      
Query: 434 acaagaccagcgactgccatcttctccattggatgattatgag 476
           ||||| ||||| || ||||| |||||||| || || |||||||
Sbjct: 536 acaagtccagcaacagccattttctccatgggttggttatgag 494

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>gb|AY087593.1| Arabidopsis thaliana clone 3689 mRNA, complete sequence
          Length = 1136

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 177/223 (79%)
 Strand = Plus / Minus

                                                                       
Query: 254 tccacccagtgaaacttgatctggctagcaccataaaatgagagggccaccagggacgtc 313
           ||||||||||||||||||| |||||| |||||||| || || || || ||||| || |||
Sbjct: 733 tccacccagtgaaacttgagctggcttgcaccatagaacgatagagcaaccagcgatgtc 674

                                                                       
Query: 314 atcactgtgatggtactgaagagaagtacaatgattgcaagaaacatcatcgaggatgag 373
           || ||    ||||| |||||||| || || ||||| || |||| |||||| ||    || 
Sbjct: 673 ataaccaatatggtgctgaagagcagaactatgatggcgagaaccatcatggacttggaa 614

                                                                       
Query: 374 ttgccaacagcaagaaacactggaagagtagttgcacagggtgataatgctggtacaagt 433
           || |||||||| || || || || ||||| |||||||| || |||||||| || ||||| 
Sbjct: 613 tttccaacagcgaggaaaaccgggagagttgttgcacaaggagataatgcaggaacaagg 554

                                                      
Query: 434 acaagaccagcgactgccatcttctccattggatgattatgag 476
           ||||| ||||| || ||||| |||||||| || || |||||||
Sbjct: 553 acaagtccagcaacagccattttctccatgggttggttatgag 511

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>gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome
             V, complete sequence
          Length = 84413

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 254   tccacccagtgaaacttgatctggctagcaccata 288
             ||||||||||||||||||| |||||| ||||||||
Sbjct: 52659 tccacccagtgaaacttgagctggcttgcaccata 52693

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>emb|CR931734.2| Medicago truncatula chromosome 5 clone mth2-62m24, COMPLETE SEQUENCE
          Length = 88409

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                         
Query: 341   acaatgattgcaagaaacatcatcgaggatgagttgccaacagcaagaaacactggaaga 400
             |||||||| || || | |||||| || ||||| || |||||||||||||| |||||||| 
Sbjct: 81329 acaatgatggcgagcaccatcatggaagatgaatttccaacagcaagaaatactggaagt 81270

                                                                         
Query: 401   gtagttgcacagggtgataatgctggtacaagtacaagaccagcgactgccatcttctcc 460
             || || ||||| || || ||||| || ||||| | ||| || || || ||||| ||||||
Sbjct: 81269 gttgtagcacaaggagacaatgcaggaacaagaataagcccggctacagccattttctcc 81210

               
Query: 461   at 462
             ||
Sbjct: 81209 at 81208

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>gb|AC112506.5| Homo sapiens 3 BAC RP11-286P15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 115279

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 323   atggtactgaagagaagtacaa 344
             ||||||||||||||||||||||
Sbjct: 29451 atggtactgaagagaagtacaa 29472

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>gb|AC012215.11| Homo sapiens chromosome , clone RP11-345N15, complete sequence
          Length = 210723

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 378    caacagcaagaaacactggaag 399
              ||||||||||||||||||||||
Sbjct: 166504 caacagcaagaaacactggaag 166525

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>gb|AC083838.6| Homo sapiens chromosome 8, clone RP11-42L4, complete sequence
          Length = 156623

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 378   caacagcaagaaacactggaag 399
             ||||||||||||||||||||||
Sbjct: 95858 caacagcaagaaacactggaag 95879

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>gb|AC120534.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0084A20, complete sequence
          Length = 139391

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 298   ggccaccagggacgtcatcac 318
             |||||||||||||||||||||
Sbjct: 66108 ggccaccagggacgtcatcac 66128

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>gb|AC138401.9| Mus musculus chromosome 13, clone RP24-79G5, complete sequence
          Length = 209942

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 106    catctatttatattcctctca 126
              |||||||||||||||||||||
Sbjct: 176552 catctatttatattcctctca 176572

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>gb|AC121936.2| Mus musculus BAC clone RP24-207J5 from 13, complete sequence
          Length = 157713

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 106   catctatttatattcctctca 126
             |||||||||||||||||||||
Sbjct: 45908 catctatttatattcctctca 45928

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>gb|AC093277.3| Homo sapiens chromosome 5 clone RP11-386E5, complete sequence
          Length = 58894

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 503   acaaacaacagaatgtaacct 523
             |||||||||||||||||||||
Sbjct: 20162 acaaacaacagaatgtaacct 20142

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>gb|AC114977.2| Homo sapiens chromosome 5 clone RP11-49C20, complete sequence
          Length = 180697

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 503  acaaacaacagaatgtaacct 523
            |||||||||||||||||||||
Sbjct: 7109 acaaacaacagaatgtaacct 7129

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>gb|AY224425.1| Oryza sativa (japonica cultivar-group) isolate 20135 bZIP-like
           protein mRNA, complete cds
          Length = 603

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 298 ggccaccagggacgtcatcac 318
           |||||||||||||||||||||
Sbjct: 499 ggccaccagggacgtcatcac 519

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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 298     ggccaccagggacgtcatcac 318
               |||||||||||||||||||||
Sbjct: 2925295 ggccaccagggacgtcatcac 2925315

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>gb|AC016950.8|AC016950 Homo sapiens 3 BAC RP11-239I11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 60    acaagagacaatttgtttcat 80
             |||||||||||||||||||||
Sbjct: 40740 acaagagacaatttgtttcat 40720

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>dbj|AK099600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047E21, full
            insert sequence
          Length = 3085

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 298  ggccaccagggacgtcatcac 318
            |||||||||||||||||||||
Sbjct: 2721 ggccaccagggacgtcatcac 2741

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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 298     ggccaccagggacgtcatcac 318
               |||||||||||||||||||||
Sbjct: 2934326 ggccaccagggacgtcatcac 2934346

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>gb|AC153889.19| Mus musculus 10 BAC RP23-434A12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190042

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    agcaagaaacactggaagag 401
              ||||||||||||||||||||
Sbjct: 172133 agcaagaaacactggaagag 172152



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   agcaagaaacactggaagag 401
             ||||||||||||||||||||
Sbjct: 39021 agcaagaaacactggaagag 39040

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>ref|XM_550090.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  ccatcatggtgatggaacac 195
            ||||||||||||||||||||
Sbjct: 1493 ccatcatggtgatggaacac 1512

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>gb|AC167202.8| Mus musculus  BAC RP24-243A15 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 180658

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   agcaagaaacactggaagag 401
             ||||||||||||||||||||
Sbjct: 29203 agcaagaaacactggaagag 29184

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>gb|AC127369.4| Mus musculus BAC clone RP23-26A15 from 8, complete sequence
          Length = 211411

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 525    ctccaagaaatattagcaac 544
              ||||||||||||||||||||
Sbjct: 147544 ctccaagaaatattagcaac 147525

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>emb|AL158073.10| Human DNA sequence from clone RP11-323A7 on chromosome 9 Contains a
             cell division cycle associated 7 (JPO1, FLJ14722) (CDCA7)
             pseudogene, complete sequence
          Length = 186334

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   tgaagagaagtacaatgatt 349
             ||||||||||||||||||||
Sbjct: 12961 tgaagagaagtacaatgatt 12980

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>emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0054D14,
              complete sequence
          Length = 160587

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 397    aagagtagttgcacagggtg 416
              ||||||||||||||||||||
Sbjct: 142589 aagagtagttgcacagggtg 142570

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>emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033P05,
             complete sequence
          Length = 120635

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 397   aagagtagttgcacagggtg 416
             ||||||||||||||||||||
Sbjct: 19023 aagagtagttgcacagggtg 19004

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>gb|AC106038.3| Homo sapiens chromosome 8, clone RP11-68L18, complete sequence
          Length = 159024

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   ttgtttcatagtgaacttag 91
            ||||||||||||||||||||
Sbjct: 8863 ttgtttcatagtgaacttag 8882

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>gb|AC093329.6| Homo sapiens chromosome 8, clone RP11-662G23, complete sequence
          Length = 191820

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    ttgtttcatagtgaacttag 91
             ||||||||||||||||||||
Sbjct: 66473 ttgtttcatagtgaacttag 66454

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>gb|AC068510.8| Homo sapiens chromosome 8, clone RP11-662E23, complete sequence
          Length = 191820

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    ttgtttcatagtgaacttag 91
             ||||||||||||||||||||
Sbjct: 66473 ttgtttcatagtgaacttag 66454

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>gb|AC174742.8| Mus musculus  BAC RP24-258O12 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 163118

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   agcaagaaacactggaagag 401
             ||||||||||||||||||||
Sbjct: 56444 agcaagaaacactggaagag 56463

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 397      aagagtagttgcacagggtg 416
                ||||||||||||||||||||
Sbjct: 15126128 aagagtagttgcacagggtg 15126109

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>gb|AC098823.3| Homo sapiens BAC clone RP11-420E18 from 2, complete sequence
          Length = 102117

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    gtgaacttagggaacttcat 101
             ||||||||||||||||||||
Sbjct: 96202 gtgaacttagggaacttcat 96183

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>gb|AF343884.1| Phalanger sericeus NADH dehydrogenase subunit 2 (ND2) gene, partial
           cds; mitochondrial gene for mitochondrial product
          Length = 1040

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 494 tttcctaacacaaacaacag 513
           ||||||||||||||||||||
Sbjct: 177 tttcctaacacaaacaacag 196

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>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0019D06
          Length = 167405

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   ccatcatggtgatggaacac 195
             ||||||||||||||||||||
Sbjct: 32880 ccatcatggtgatggaacac 32899

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>dbj|AK066922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090N09, full
            insert sequence
          Length = 1632

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  ccatcatggtgatggaacac 195
            ||||||||||||||||||||
Sbjct: 1493 ccatcatggtgatggaacac 1512

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>gb|AC172027.4| Mus musculus  BAC RP24-219P17 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 185679

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    agcaagaaacactggaagag 401
              ||||||||||||||||||||
Sbjct: 106573 agcaagaaacactggaagag 106592

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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 415     tgataatgctggtacaagtacaag 438
               ||||| ||||||||||||||||||
Sbjct: 1044290 tgatactgctggtacaagtacaag 1044267

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>gb|AC171183.6| Mus musculus  BAC RP24-545B2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 211697

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    agcaagaaacactggaagag 401
              ||||||||||||||||||||
Sbjct: 125085 agcaagaaacactggaagag 125104

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>emb|AL627259.8| Mouse DNA sequence from clone RP23-399H3 on chromosome 4, complete
              sequence
          Length = 176063

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     tgaacttagggaacttcatt 102
              ||||||||||||||||||||
Sbjct: 143966 tgaacttagggaacttcatt 143947


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,612,292
Number of Sequences: 3902068
Number of extensions: 5612292
Number of successful extensions: 104645
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104366
Number of HSP's gapped (non-prelim): 272
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result