ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah60o03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC022431.6| Homo sapiens chromosome 5 clone CTD-2583B1, compl... 44 0.59
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
3gb|AC008940.3|AC008940 Homo sapiens chromosome 5 clone CTD-2319M... 44 0.59
4dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
5gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 2.3
6gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
7gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
8gb|AC145475.1| Pan troglodytes BAC clone RP43-34K7 from 7, compl... 42 2.3
9emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome... 42 2.3
10dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 2.3
11gb|AC009262.5| Homo sapiens chromosome 7 clone RP11-179B11, comp... 42 2.3
12gb|AC005686.1|AC005686 Homo sapiens clone GS1-234F24 from 7p14-1... 42 2.3
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
14emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 2.3
15ref|NM_189696.1| Oryza sativa (japonica cultivar-group), predic... 40 9.2
16ref|NM_190644.1| Oryza sativa (japonica cultivar-group), predic... 40 9.2
17ref|XM_477276.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.2
18gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic ge... 40 9.2
19gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
20gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
21gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
22gb|AC161050.2| Mus musculus BAC clone RP23-477C12 from chromosom... 40 9.2
23gb|AC113945.26| Mus musculus chromosome 3, clone RP24-96D10, com... 40 9.2
24gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
25gb|AC093955.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
26gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
27ref|XM_985836.1| PREDICTED: Mus musculus La ribonucleoprotein do... 40 9.2
28ref|XM_126172.7| PREDICTED: Mus musculus La ribonucleoprotein do... 40 9.2
29gb|AC102435.6| Mus musculus chromosome 12, clone RP24-123B22, co... 40 9.2
30gb|BC049176.1| Xenopus laevis ATPase, H+/K+ transporting, nongas... 40 9.2
31gb|AC105336.14| Mus musculus chromosome 3, clone RP24-277J22, co... 40 9.2
32emb|X84374.3|SCARD1GN Saccharothrix mutabilis subsp. capreolus A... 40 9.2
33emb|AJ277471.1|OSA277471 Oryza sativa rbbi2-4 gene for putative ... 40 9.2
34emb|BX322794.6| Zebrafish DNA sequence from clone RP71-44B8 in l... 40 9.2
35gb|AC113889.6| Rattus norvegicus 2 BAC CH230-337K18 (Children's ... 40 9.2
36gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, com... 40 9.2
37dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
38dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
39gb|AC116348.3| Homo sapiens chromosome 16 clone RP11-297C4, comp... 40 9.2
40gb|AF305070.2|AF305070 Chlamydomonas reinhardtii DEAH-box RNA he... 40 9.2
41dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
42gb|AE004826.1| Pseudomonas aeruginosa PAO1, section 387 of 529 o... 40 9.2
43gb|AE004514.1| Pseudomonas aeruginosa PAO1, section 75 of 529 of... 40 9.2
44dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
45dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
46dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
47dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
48gb|AE005114.1| Halobacterium sp. NRC-1 section 145 of 170 of the... 40 9.2
49dbj|AB073162.1| Arabidopsis thaliana DNA, chromosome 4 centromer... 40 9.2
50dbj|AK120414.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
51ref|XM_554050.1| Anopheles gambiae str. PEST ENSANGP00000026763 ... 40 9.2
52dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
53dbj|AK110899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
54dbj|AK073380.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
55dbj|AK071994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
56dbj|AK070081.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
57dbj|AK066742.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
58dbj|AK058353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
59gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 9.2
60emb|CT025692.15| Mouse DNA sequence from clone RP23-312G18 on ch... 40 9.2
61emb|AL672182.18| Mouse DNA sequence from clone RP23-293I3 on chr... 40 9.2 
>gb|AC022431.6| Homo sapiens chromosome 5 clone CTD-2583B1, complete sequence
          Length = 173698

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 622    ctgccgtgctgcagagggtggg 643
              ||||||||||||||||||||||
Sbjct: 155042 ctgccgtgctgcagagggtggg 155021
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 338      caacaaaccacgccacgcacga 359
                ||||||||||||||||||||||
Sbjct: 26236924 caacaaaccacgccacgcacga 26236945
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>gb|AC008940.3|AC008940 Homo sapiens chromosome 5 clone CTD-2319M24, complete sequence
          Length = 131975

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 622  ctgccgtgctgcagagggtggg 643
            ||||||||||||||||||||||
Sbjct: 8192 ctgccgtgctgcagagggtggg 8171
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>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1014_E06
          Length = 112241

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 338   caacaaaccacgccacgcacga 359
             ||||||||||||||||||||||
Sbjct: 69849 caacaaaccacgccacgcacga 69870
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 393     ttgccgccgtcctcgccgtcgccgg 417
               |||||||||||| ||||||||||||
Sbjct: 3928193 ttgccgccgtccccgccgtcgccgg 3928169
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>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01,
              complete sequence
          Length = 140077

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 397    cgccgtcctcgccgtcgccgg 417
              |||||||||||||||||||||
Sbjct: 139630 cgccgtcctcgccgtcgccgg 139650
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>gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0022L07, complete sequence
          Length = 142134

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 397   cgccgtcctcgccgtcgccgg 417
             |||||||||||||||||||||
Sbjct: 51408 cgccgtcctcgccgtcgccgg 51428
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>gb|AC145475.1| Pan troglodytes BAC clone RP43-34K7 from 7, complete sequence
          Length = 136914

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 585   cagaaatcactttgacacatg 605
             |||||||||||||||||||||
Sbjct: 59106 cagaaatcactttgacacatg 59086
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>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13
          Length = 349606

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 393    ttgccgccgtcctcgccgtcgccgg 417
              |||||||||||| ||||||||||||
Sbjct: 117712 ttgccgccgtccccgccgtcgccgg 117688
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 397     cgccgtcctcgccgtcgccgg 417
               |||||||||||||||||||||
Sbjct: 3904213 cgccgtcctcgccgtcgccgg 3904193
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>gb|AC009262.5| Homo sapiens chromosome 7 clone RP11-179B11, complete sequence
          Length = 149255

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 585   cagaaatcactttgacacatg 605
             |||||||||||||||||||||
Sbjct: 48867 cagaaatcactttgacacatg 48887
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>gb|AC005686.1|AC005686 Homo sapiens clone GS1-234F24 from 7p14-15, complete sequence
          Length = 141387

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 585   cagaaatcactttgacacatg 605
             |||||||||||||||||||||
Sbjct: 50959 cagaaatcactttgacacatg 50939
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 397      cgccgtcctcgccgtcgccgg 417
                |||||||||||||||||||||
Sbjct: 14192075 cgccgtcctcgccgtcgccgg 14192095



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 397      cgccgtcctcgccgtcgccg 416
                ||||||||||||||||||||
Sbjct: 17171591 cgccgtcctcgccgtcgccg 17171610



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 138      cgagctacacaaactgacaa 157
                ||||||||||||||||||||
Sbjct: 13172677 cgagctacacaaactgacaa 13172658



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 138      cgagctacacaaactgacaa 157
                ||||||||||||||||||||
Sbjct: 11995640 cgagctacacaaactgacaa 11995659



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 395     gccgccgtcctcgccgtcgccgga 418
               |||||||||| |||||||||||||
Sbjct: 2785445 gccgccgtccccgccgtcgccgga 2785422
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 393    ttgccgccgtcctcgccgtcgccgg 417
              ||||||||||| |||||||||||||
Sbjct: 181375 ttgccgccgtcgtcgccgtcgccgg 181351
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>ref|NM_189696.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2016

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 395  gccgccgtcctcgccgtcgccgga 418
            ||||||||| ||||||||||||||
Sbjct: 1803 gccgccgtcgtcgccgtcgccgga 1826
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>ref|NM_190644.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 582

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 613 acgcggtcgctgccgtgctg 632
           ||||||||||||||||||||
Sbjct: 200 acgcggtcgctgccgtgctg 219
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>ref|XM_477276.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3519

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 cgccgtcctcgccgtcgccg 416
           ||||||||||||||||||||
Sbjct: 536 cgccgtcctcgccgtcgccg 555
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>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete
             sequence
          Length = 113193

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   cgccgtcctcgccgtcgccg 416
             ||||||||||||||||||||
Sbjct: 52715 cgccgtcctcgccgtcgccg 52734
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>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0087J09, complete sequence
          Length = 153351

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   cgagctacacaaactgacaa 157
             ||||||||||||||||||||
Sbjct: 71253 cgagctacacaaactgacaa 71272
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>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12,
              complete sequence
          Length = 164064

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 397    cgccgtcctcgccgtcgccg 416
              ||||||||||||||||||||
Sbjct: 115726 cgccgtcctcgccgtcgccg 115745
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>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04,
             complete sequence
          Length = 88812

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 395   gccgccgtcctcgccgtcgccgga 418
             |||||||||| |||||||||||||
Sbjct: 63771 gccgccgtccccgccgtcgccgga 63748
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>gb|AC161050.2| Mus musculus BAC clone RP23-477C12 from chromosome 12, complete
             sequence
          Length = 197084

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 537   ctcctctcagaccatctgta 556
             ||||||||||||||||||||
Sbjct: 18461 ctcctctcagaccatctgta 18480
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>gb|AC113945.26| Mus musculus chromosome 3, clone RP24-96D10, complete sequence
          Length = 144239

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 455   tcccctccctcatgctctcc 474
             ||||||||||||||||||||
Sbjct: 49487 tcccctccctcatgctctcc 49506
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>gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0082F22, complete sequence
          Length = 176038

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    cgagctacacaaactgacaa 157
              ||||||||||||||||||||
Sbjct: 135454 cgagctacacaaactgacaa 135435
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>gb|AC093955.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
            OJ1240_E09, complete sequence
          Length = 118742

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  cgagctacacaaactgacaa 157
            ||||||||||||||||||||
Sbjct: 6676 cgagctacacaaactgacaa 6657
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>gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0018C06,
             complete sequence
          Length = 179695

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   cgagctacacaaactgacaa 157
             ||||||||||||||||||||
Sbjct: 78454 cgagctacacaaactgacaa 78473
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>ref|XM_985836.1| PREDICTED: Mus musculus La ribonucleoprotein domain family, member
           1 (Larp1), mRNA
          Length = 6617

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 gccgccgtcctcgccgtcgc 414
           ||||||||||||||||||||
Sbjct: 385 gccgccgtcctcgccgtcgc 366
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>ref|XM_126172.7| PREDICTED: Mus musculus La ribonucleoprotein domain family, member 1
            (Larp1), mRNA
          Length = 7245

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 395  gccgccgtcctcgccgtcgc 414
            ||||||||||||||||||||
Sbjct: 1017 gccgccgtcctcgccgtcgc 998
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>gb|AC102435.6| Mus musculus chromosome 12, clone RP24-123B22, complete sequence
          Length = 155483

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 537  ctcctctcagaccatctgta 556
            ||||||||||||||||||||
Sbjct: 6537 ctcctctcagaccatctgta 6518
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>gb|BC049176.1| Xenopus laevis ATPase, H+/K+ transporting, nongastric, alpha
            polypeptide, mRNA (cDNA clone MGC:53413 IMAGE:5571711),
            complete cds
          Length = 4157

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 516  ttgcatctttggcttctgga 535
            ||||||||||||||||||||
Sbjct: 1068 ttgcatctttggcttctgga 1087
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>gb|AC105336.14| Mus musculus chromosome 3, clone RP24-277J22, complete sequence
          Length = 176399

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 453   aatcccctccctcatgctct 472
             ||||||||||||||||||||
Sbjct: 43638 aatcccctccctcatgctct 43657
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>emb|X84374.3|SCARD1GN Saccharothrix mutabilis subsp. capreolus A201A biosynthetic gene
            cluster
          Length = 33676

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 397  cgccgtcctcgccgtcgccg 416
            ||||||||||||||||||||
Sbjct: 6610 cgccgtcctcgccgtcgccg 6591
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>emb|AJ277471.1|OSA277471 Oryza sativa rbbi2-4 gene for putative Bowman Bird trypsin inhibitor
          Length = 3036

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 394  tgccgccgtcctcgccgtcg 413
            ||||||||||||||||||||
Sbjct: 1223 tgccgccgtcctcgccgtcg 1204
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>emb|BX322794.6| Zebrafish DNA sequence from clone RP71-44B8 in linkage group 23, complete
              sequence
          Length = 144572

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    catgctctccatcttctcgt 484
              ||||||||||||||||||||
Sbjct: 143743 catgctctccatcttctcgt 143762
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>gb|AC113889.6| Rattus norvegicus 2 BAC CH230-337K18 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 148510

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  ccctccagagtattgaaaca 254
            ||||||||||||||||||||
Sbjct: 3955 ccctccagagtattgaaaca 3974
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>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence
          Length = 140234

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 395   gccgccgtcctcgccgtcgccgga 418
             |||||||||| |||||||||||||
Sbjct: 82109 gccgccgtccccgccgtcgccgga 82132
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 394      tgccgccgtcctcgccgtcg 413
                ||||||||||||||||||||
Sbjct: 16274151 tgccgccgtcctcgccgtcg 16274170



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 397     cgccgtcctcgccgtcgccg 416
               ||||||||||||||||||||
Sbjct: 8317896 cgccgtcctcgccgtcgccg 8317877
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 613      acgcggtcgctgccgtgctg 632
                ||||||||||||||||||||
Sbjct: 36731529 acgcggtcgctgccgtgctg 36731548



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 395     gccgccgtcctcgccgtcgccgga 418
               ||||||||| ||||||||||||||
Sbjct: 5036805 gccgccgtcgtcgccgtcgccgga 5036782
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>gb|AC116348.3| Homo sapiens chromosome 16 clone RP11-297C4, complete sequence
          Length = 149508

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 451    ccaatcccctccctcatgct 470
              ||||||||||||||||||||
Sbjct: 100623 ccaatcccctccctcatgct 100642
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>gb|AF305070.2|AF305070 Chlamydomonas reinhardtii DEAH-box RNA helicase (Mut6) mRNA, complete
            cds
          Length = 4299

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 397  cgccgtcctcgccgtcgccg 416
            ||||||||||||||||||||
Sbjct: 2083 cgccgtcctcgccgtcgccg 2064
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>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0001B06
          Length = 140304

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 395   gccgccgtcctcgccgtcgccgga 418
             ||||||||| ||||||||||||||
Sbjct: 30243 gccgccgtcgtcgccgtcgccgga 30220
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>gb|AE004826.1| Pseudomonas aeruginosa PAO1, section 387 of 529 of the complete
            genome
          Length = 10458

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 397  cgccgtcctcgccgtcgccg 416
            ||||||||||||||||||||
Sbjct: 9179 cgccgtcctcgccgtcgccg 9198
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>gb|AE004514.1| Pseudomonas aeruginosa PAO1, section 75 of 529 of the complete genome
          Length = 10522

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 395  gccgccgtcctcgccgtcgccgga 418
            ||||||||||||||||||| ||||
Sbjct: 5897 gccgccgtcctcgccgtcgtcgga 5920
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>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0529E05
          Length = 134982

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 613   acgcggtcgctgccgtgctg 632
             ||||||||||||||||||||
Sbjct: 57844 acgcggtcgctgccgtgctg 57863
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>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0021G06
          Length = 137678

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 397   cgccgtcctcgccgtcgccg 416
             ||||||||||||||||||||
Sbjct: 22994 cgccgtcctcgccgtcgccg 22975
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>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0671B11
          Length = 168372

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 395    gccgccgtcctcgccgtcgccgga 418
              ||||||||| ||||||||||||||
Sbjct: 137258 gccgccgtcgtcgccgtcgccgga 137235
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>dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0639B07
          Length = 138780

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 397    cgccgtcctcgccgtcgccg 416
              ||||||||||||||||||||
Sbjct: 113008 cgccgtcctcgccgtcgccg 112989
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>gb|AE005114.1| Halobacterium sp. NRC-1 section 145 of 170 of the complete genome
          Length = 9825

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 394  tgccgccgtcctcgccgtcg 413
            ||||||||||||||||||||
Sbjct: 3489 tgccgccgtcctcgccgtcg 3508
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>dbj|AB073162.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC
             clone:F8H12
          Length = 92597

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 458   cctccctcatgctctccatc 477
             ||||||||||||||||||||
Sbjct: 78814 cctccctcatgctctccatc 78833
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>dbj|AK120414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092H05, full
           insert sequence
          Length = 4391

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 cgccgtcctcgccgtcgccg 416
           ||||||||||||||||||||
Sbjct: 546 cgccgtcctcgccgtcgccg 565
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>ref|XM_554050.1| Anopheles gambiae str. PEST ENSANGP00000026763
           (ENSANGG00000024726), partial mRNA
          Length = 486

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 396 ccgccgtcctcgccgtcgcc 415
           ||||||||||||||||||||
Sbjct: 251 ccgccgtcctcgccgtcgcc 232
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>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_H04
          Length = 151699

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   tgccgccgtcctcgccgtcg 413
             ||||||||||||||||||||
Sbjct: 94589 tgccgccgtcctcgccgtcg 94608
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>dbj|AK110899.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-A11, full
            insert sequence
          Length = 1707

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 395  gccgccgtcctcgccgtcgccgga 418
            ||||||||| ||||||||||||||
Sbjct: 1030 gccgccgtcgtcgccgtcgccgga 1007
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>dbj|AK073380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029I23, full
           insert sequence
          Length = 901

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 cgccgtcctcgccgtcgccg 416
           ||||||||||||||||||||
Sbjct: 46  cgccgtcctcgccgtcgccg 65
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>dbj|AK071994.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M18, full
            insert sequence
          Length = 1642

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 395  gccgccgtcctcgccgtcgccgga 418
            ||||||||| ||||||||||||||
Sbjct: 1241 gccgccgtcgtcgccgtcgccgga 1264
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>dbj|AK070081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044K03, full
           insert sequence
          Length = 2025

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 395 gccgccgtcctcgccgtcgccgga 418
           |||||||||| |||||||||||||
Sbjct: 148 gccgccgtccccgccgtcgccgga 125
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>dbj|AK066742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087A22, full
           insert sequence
          Length = 3519

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 cgccgtcctcgccgtcgccg 416
           ||||||||||||||||||||
Sbjct: 536 cgccgtcctcgccgtcgccg 555
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>dbj|AK058353.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-E09, full
            insert sequence
          Length = 1658

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 395  gccgccgtcctcgccgtcgccgga 418
            ||||||||| ||||||||||||||
Sbjct: 1092 gccgccgtcgtcgccgtcgccgga 1115
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 393     ttgccgccgtcctcgccgtc 412
               ||||||||||||||||||||
Sbjct: 5986956 ttgccgccgtcctcgccgtc 5986975
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>emb|CT025692.15| Mouse DNA sequence from clone RP23-312G18 on chromosome 17, complete
              sequence
          Length = 177741

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 455    tcccctccctcatgctctcc 474
              ||||||||||||||||||||
Sbjct: 107650 tcccctccctcatgctctcc 107631
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>emb|AL672182.18| Mouse DNA sequence from clone RP23-293I3 on chromosome 11, complete
              sequence
          Length = 211363

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 395    gccgccgtcctcgccgtcgc 414
              ||||||||||||||||||||
Sbjct: 160639 gccgccgtcctcgccgtcgc 160658


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,665,725
Number of Sequences: 3902068
Number of extensions: 5665725
Number of successful extensions: 103471
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102497
Number of HSP's gapped (non-prelim): 974
length of query: 670
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 647
effective length of database: 17,143,297,704
effective search space: 11091713614488
effective search space used: 11091713614488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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