ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah60n04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_191434.1| Oryza sativa (japonica cultivar-group), predic... 355 1e-94
2dbj|AK120893.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 1e-94
3dbj|AK104917.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 1e-94
4dbj|AK069612.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 3e-92
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 272 1e-69
6dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic D... 272 1e-69
7ref|XM_476765.1| Oryza sativa (japonica cultivar-group), mRNA 101 3e-18
8ref|XM_506188.1| PREDICTED Oryza sativa (japonica cultivar-group... 101 3e-18
9dbj|AK100663.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 3e-18
10dbj|AK066357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 3e-18
11ref|XM_469960.1| Oryza sativa (japonica cultivar-group), mRNA 100 1e-17
12dbj|AK121620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
13dbj|AK103407.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
14gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 geno... 92 3e-15
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 92 3e-15
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
17ref|NM_111265.2| Arabidopsis thaliana ATP binding / kinase/ prot... 76 2e-10
18gb|AY128325.1| Arabidopsis thaliana putative casein kinase (At3g... 76 2e-10
19dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
20emb|BX825856.1|CNS0A7N4 Arabidopsis thaliana Full-length cDNA Co... 76 2e-10
21emb|BX823466.1|CNS0A6MY Arabidopsis thaliana Full-length cDNA Co... 76 2e-10
22dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
23dbj|AK100357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
24dbj|AK072116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
25ref|NM_128136.2| Arabidopsis thaliana ATP binding / kinase/ prot... 64 7e-07
26ref|NM_201803.1| Arabidopsis thaliana ATP binding / kinase/ prot... 64 7e-07
27ref|XM_476111.1| Oryza sativa (japonica cultivar-group), predic... 64 7e-07
28gb|AY070056.1| Arabidopsis thaliana At2g25760 mRNA sequence 64 7e-07
29gb|AY106527.1| Zea mays PCO139661 mRNA sequence 60 1e-05
30dbj|AK102819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
31gb|BT014172.1| Lycopersicon esculentum clone 133312F, mRNA sequence 56 2e-04
32gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC... 56 2e-04
33gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC... 56 2e-04
34gb|AF302261.1|AF302261 Brassica napus BcNA1 gene, promoter sequence 52 0.002
35gb|M64633.1|BNANAPINC Brassica napus (clone BnNa) DNA sequence 52 0.002
36gb|M64632.1|BNANAPINB Brassica campestris (clone lambda GCN1-2) ... 52 0.002
37gb|AF479055.1| Triticum aestivum casein kinase-like protein mRNA... 50 0.010
38gb|BT018029.1| Zea mays clone EL01N0530B07.c mRNA sequence 46 0.15
39gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 ma... 46 0.15
40gb|BT024085.1| Zea mays clone EL01N0553E07 mRNA sequence 46 0.15
41gb|AY108079.1| Zea mays PCO139663 mRNA sequence 46 0.15
42dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.61
43dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.61
44ref|NM_188260.1| Oryza sativa (japonica cultivar-group), predic... 42 2.4
45dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
46dbj|AK103403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
47dbj|AK099617.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
48gb|AY112140.1| Zea mays CL67806_1 mRNA sequence 42 2.4
49dbj|AK060271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
50gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
51emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb... 42 2.4
52gb|AC133102.4| Mus musculus BAC clone RP23-173H19 from 1, comple... 42 2.4
53dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 2.4
54ref|NM_119763.2| Arabidopsis thaliana L-ascorbate peroxidase/ pe... 40 9.5
55gb|AC113005.10| Mus musculus chromosome 3, clone RP23-299B23, co... 40 9.5
56gb|BT016369.1| Zea mays clone Contig202 mRNA sequence 40 9.5
57emb|CR762428.7| Zebrafish DNA sequence from clone CH211-172N16 i... 40 9.5
58gb|AC132094.3| Mus musculus BAC clone RP24-376B20 from chromosom... 40 9.5
59gb|AC124451.4| Mus musculus BAC clone RP24-218I3 from chromosome... 40 9.5
60gb|AC115122.4| Mus musculus BAC clone RP24-108L20 from chromosom... 40 9.5
61emb|BX936288.8| Platypus DNA sequence from clone XX-534O22, comp... 40 9.5
62gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 40 9.5
63emb|AL359877.12| Human DNA sequence from clone RP11-179A4 on chr... 40 9.5
64gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6... 40 9.5
65emb|AL161727.15| Human DNA sequence from clone RP11-232A1 on chr... 40 9.5
66gb|AF500198.1| Danio rerio fibronectin variant 3 mRNA, partial cds 40 9.5
67gb|AF441714.1| Arabidopsis thaliana putative ascorbate peroxidas... 40 9.5
68ref|XM_793199.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.5
69emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, ... 40 9.5
70emb|AL022373.1|ATT19K4 Arabidopsis thaliana DNA chromosome 4, BA... 40 9.5
71gb|AC096741.3| Homo sapiens BAC clone RP11-327O17 from 4, comple... 40 9.5
72gb|AC010310.5| Homo sapiens chromosome 5 clone CTB-55B8, complet... 40 9.5
73gb|AC010607.8| Homo sapiens chromosome 5 clone CTB-28D11, comple... 40 9.5
74emb|CR387403.1| Gallus gallus finished cDNA, clone ChEST277k9 40 9.5
75gb|BT006053.1| Arabidopsis thaliana clone U51359 putative ascorb... 40 9.5
76dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
77gb|AC068483.6| Homo sapiens BAC clone RP11-31G7 from 2, complete... 40 9.5
78gb|AC097347.6| Homo sapiens X BAC RP11-1M18 (Roswell Park Cancer... 40 9.5
79dbj|AP003244.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
80dbj|BS000118.1| Pan troglodytes chromosome 22 clone:PTB-141G07, ... 40 9.5
81gb|AY725818.1| Danio rerio fibronectin 1b (fn1b) mRNA, complete cds 40 9.5
82dbj|AK119023.1| Arabidopsis thaliana At4g35970 mRNA for putative... 40 9.5
83gb|AY105752.1| Zea mays PCO066784 mRNA sequence 40 9.5
84emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BA... 40 9.5
85gb|AC147129.3| Mus musculus BAC clone RP24-531L5 from 1, complet... 40 9.5
86gb|AC148978.3| Mus musculus BAC clone RP23-359K8 from 14, comple... 40 9.5

>ref|NM_191434.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2097

 Score =  355 bits (179), Expect = 1e-94
 Identities = 230/247 (93%)
 Strand = Plus / Minus

                                                                        
Query: 447  gtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttcacatgg 506
            ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 2087 gtccggccatagcatatcgaagcaatgtaaagattcttggcccatttctccttcacatgg 2028

                                                                        
Query: 507  ttgcttgggaaagccgatgttctgagagtttcttgtgtctcgtccatcaattttcttttg 566
            |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 2027 ttgcttggaaaagcagatgttctaagagtttcttgtgtctcgtccatcaattttctcttg 1968

                                                                        
Query: 567  ggaatgctcaatataaaagcagcttgatcaccagtggctgctgtagaagttattctatat 626
            || || |||||||||||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 1967 ggtatactcaatataaaagcagcttggtcaccagtggctgctgtagaagttattctatag 1908

                                                                        
Query: 627  ccattctcccatcgtcggtggatcccttcactgggataaagaaaatccaattctactacc 686
            ||||||||||| || |||||||| |||||||| ||||| | |||||||||||||||||||
Sbjct: 1907 ccattctcccaacgccggtggataccttcactaggatataaaaaatccaattctactacc 1848

                   
Query: 687  tgttcag 693
            |||||||
Sbjct: 1847 tgttcag 1841



to top

>dbj|AK120893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029O03, full
            insert sequence
          Length = 2788

 Score =  355 bits (179), Expect = 1e-94
 Identities = 230/247 (93%)
 Strand = Plus / Minus

                                                                        
Query: 447  gtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttcacatgg 506
            ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 2256 gtccggccatagcatatcgaagcaatgtaaagattcttggcccatttctccttcacatgg 2197

                                                                        
Query: 507  ttgcttgggaaagccgatgttctgagagtttcttgtgtctcgtccatcaattttcttttg 566
            |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 2196 ttgcttggaaaagcagatgttctaagagtttcttgtgtctcgtccatcaattttctcttg 2137

                                                                        
Query: 567  ggaatgctcaatataaaagcagcttgatcaccagtggctgctgtagaagttattctatat 626
            || || |||||||||||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 2136 ggtatactcaatataaaagcagcttggtcaccagtggctgctgtagaagttattctatag 2077

                                                                        
Query: 627  ccattctcccatcgtcggtggatcccttcactgggataaagaaaatccaattctactacc 686
            ||||||||||| || |||||||| |||||||| ||||| | |||||||||||||||||||
Sbjct: 2076 ccattctcccaacgccggtggataccttcactaggatataaaaaatccaattctactacc 2017

                   
Query: 687  tgttcag 693
            |||||||
Sbjct: 2016 tgttcag 2010



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 53/58 (91%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                      
Query: 295  actctggccatgatgtaaggttcatctacgcaat-ttacctacacatacagagtaaca 351
            |||||||||||||||||||||| | |||  |||| |||||||||||||||||||||||
Sbjct: 2408 actctggccatgatgtaaggtttacctagccaatgttacctacacatacagagtaaca 2351



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/43 (93%), Gaps = 2/43 (4%)
 Strand = Plus / Minus

                                                       
Query: 121  tatacacaacgggctctcacaggttataggcctccaaagaggc 163
            ||||||||||||||||||| |  ||||||||||||||||||||
Sbjct: 2626 tatacacaacgggctctcaga--ttataggcctccaaagaggc 2586



to top

>dbj|AK104917.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-F04, full
           insert sequence
          Length = 1360

 Score =  355 bits (179), Expect = 1e-94
 Identities = 230/247 (93%)
 Strand = Plus / Minus

                                                                       
Query: 447 gtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttcacatgg 506
           ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gtccggccatagcatatcgaagcaatgtaaagattcttggcccatttctccttcacatgg 759

                                                                       
Query: 507 ttgcttgggaaagccgatgttctgagagtttcttgtgtctcgtccatcaattttcttttg 566
           |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 758 ttgcttggaaaagcagatgttctaagagtttcttgtgtctcgtccatcaattttctcttg 699

                                                                       
Query: 567 ggaatgctcaatataaaagcagcttgatcaccagtggctgctgtagaagttattctatat 626
           || || |||||||||||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 698 ggtatactcaatataaaagcagcttggtcaccagtggctgctgtagaagttattctatag 639

                                                                       
Query: 627 ccattctcccatcgtcggtggatcccttcactgggataaagaaaatccaattctactacc 686
           ||||||||||| || |||||||| |||||||| ||||| | |||||||||||||||||||
Sbjct: 638 ccattctcccaacgccggtggataccttcactaggatataaaaaatccaattctactacc 579

                  
Query: 687 tgttcag 693
           |||||||
Sbjct: 578 tgttcag 572



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 53/58 (91%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                     
Query: 295 actctggccatgatgtaaggttcatctacgcaat-ttacctacacatacagagtaaca 351
           |||||||||||||||||||||| | |||  |||| |||||||||||||||||||||||
Sbjct: 970 actctggccatgatgtaaggtttacctagccaatgttacctacacatacagagtaaca 913



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/43 (93%), Gaps = 2/43 (4%)
 Strand = Plus / Minus

                                                       
Query: 121  tatacacaacgggctctcacaggttataggcctccaaagaggc 163
            ||||||||||||||||||| |  ||||||||||||||||||||
Sbjct: 1188 tatacacaacgggctctcaga--ttataggcctccaaagaggc 1148



to top

>dbj|AK069612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019A22, full
            insert sequence
          Length = 2851

 Score =  347 bits (175), Expect = 3e-92
 Identities = 229/247 (92%)
 Strand = Plus / Minus

                                                                        
Query: 447  gtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttcacatgg 506
            ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 2330 gtccggccatagcatatcgaagcaatgtaaagattcttggcccatttctccttcacatgg 2271

                                                                        
Query: 507  ttgcttgggaaagccgatgttctgagagtttcttgtgtctcgtccatcaattttcttttg 566
            |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 2270 ttgcttggaaaagcagatgttctaagagtttcttgtgtctcgtccatcaattttctcttg 2211

                                                                        
Query: 567  ggaatgctcaatataaaagcagcttgatcaccagtggctgctgtagaagttattctatat 626
            || || |||||||||||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 2210 ggtatactcaatataaaagcagcttggtcaccagtggctgctgtagaagttattctatag 2151

                                                                        
Query: 627  ccattctcccatcgtcggtggatcccttcactgggataaagaaaatccaattctactacc 686
            | ||||||||| || |||||||| |||||||| ||||| | |||||||||||||||||||
Sbjct: 2150 ctattctcccaacgccggtggataccttcactaggatataaaaaatccaattctactacc 2091

                   
Query: 687  tgttcag 693
            |||||||
Sbjct: 2090 tgttcag 2084



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 53/58 (91%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                      
Query: 295  actctggccatgatgtaaggttcatctacgcaat-ttacctacacatacagagtaaca 351
            |||||||||||||||||||||| | |||  |||| |||||||||||||||||||||||
Sbjct: 2482 actctggccatgatgtaaggtttacctagccaatgttacctacacatacagagtaaca 2425



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/43 (93%), Gaps = 2/43 (4%)
 Strand = Plus / Minus

                                                       
Query: 121  tatacacaacgggctctcacaggttataggcctccaaagaggc 163
            ||||||||||||||||||| |  ||||||||||||||||||||
Sbjct: 2700 tatacacaacgggctctcaga--ttataggcctccaaagaggc 2660



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  272 bits (137), Expect = 1e-69
 Identities = 179/193 (92%)
 Strand = Plus / Minus

                                                                            
Query: 496      ccttcacatggttgcttgggaaagccgatgttctgagagtttcttgtgtctcgtccatca 555
                ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 32615248 ccttcacatggttgcttggaaaagcagatgttctaagagtttcttgtgtctcgtccatca 32615189

                                                                            
Query: 556      attttcttttgggaatgctcaatataaaagcagcttgatcaccagtggctgctgtagaag 615
                ||||||| ||||| || |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 32615188 attttctcttgggtatactcaatataaaagcagcttggtcaccagtggctgctgtagaag 32615129

                                                                            
Query: 616      ttattctatatccattctcccatcgtcggtggatcccttcactgggataaagaaaatcca 675
                |||||||||| ||||||||||| || |||||||| |||||||| ||||| | ||||||||
Sbjct: 32615128 ttattctatagccattctcccaacgccggtggataccttcactaggatataaaaaatcca 32615069

                             
Query: 676      attctactacctg 688
                |||||||||||||
Sbjct: 32615068 attctactacctg 32615056



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                    
Query: 447      gtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctcct 498
                ||||| ||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 32615437 gtccggccatagcatatcgaagcaatgtaaagattcttggcccatttctcct 32615386



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 53/58 (91%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                          
Query: 295      actctggccatgatgtaaggttcatctacgcaat-ttacctacacatacagagtaaca 351
                |||||||||||||||||||||| | |||  |||| |||||||||||||||||||||||
Sbjct: 32615589 actctggccatgatgtaaggtttacctagccaatgttacctacacatacagagtaaca 32615532



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/43 (93%), Gaps = 2/43 (4%)
 Strand = Plus / Minus

                                                           
Query: 121      tatacacaacgggctctcacaggttataggcctccaaagaggc 163
                ||||||||||||||||||| |  ||||||||||||||||||||
Sbjct: 32615807 tatacacaacgggctctcaga--ttataggcctccaaagaggc 32615767



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 453      ccatagcatatagaggcaatgtaaagattcttggcccatttctcct 498
                ||||||||||  || |||| ||| |||||||||| |||||||||||
Sbjct: 31104914 ccatagcatactgatgcaaggtagagattcttggaccatttctcct 31104959



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                           
Query: 600     gtggctgctgtagaagttattctatatccattctcccatcgtcggtggatcccttcactg 659
               ||||||||||| | |||||| | ||| ||| | ||||| ||| | ||||| |||||||| 
Sbjct: 5328403 gtggctgctgttgcagttatgcgataaccactatcccagcgttgatggattccttcactc 5328462

                                           
Query: 660     ggataaagaaaatccaattctactacct 687
               ||||| |  ||||| | |||||||||||
Sbjct: 5328463 ggatataagaaatcaagttctactacct 5328490



to top

>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0695H10
          Length = 136883

 Score =  272 bits (137), Expect = 1e-69
 Identities = 179/193 (92%)
 Strand = Plus / Minus

                                                                         
Query: 496   ccttcacatggttgcttgggaaagccgatgttctgagagtttcttgtgtctcgtccatca 555
             ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 78043 ccttcacatggttgcttggaaaagcagatgttctaagagtttcttgtgtctcgtccatca 77984

                                                                         
Query: 556   attttcttttgggaatgctcaatataaaagcagcttgatcaccagtggctgctgtagaag 615
             ||||||| ||||| || |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 77983 attttctcttgggtatactcaatataaaagcagcttggtcaccagtggctgctgtagaag 77924

                                                                         
Query: 616   ttattctatatccattctcccatcgtcggtggatcccttcactgggataaagaaaatcca 675
             |||||||||| ||||||||||| || |||||||| |||||||| ||||| | ||||||||
Sbjct: 77923 ttattctatagccattctcccaacgccggtggataccttcactaggatataaaaaatcca 77864

                          
Query: 676   attctactacctg 688
             |||||||||||||
Sbjct: 77863 attctactacctg 77851



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                 
Query: 447   gtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctcct 498
             ||||| ||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 78232 gtccggccatagcatatcgaagcaatgtaaagattcttggcccatttctcct 78181



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 53/58 (91%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                       
Query: 295   actctggccatgatgtaaggttcatctacgcaat-ttacctacacatacagagtaaca 351
             |||||||||||||||||||||| | |||  |||| |||||||||||||||||||||||
Sbjct: 78384 actctggccatgatgtaaggtttacctagccaatgttacctacacatacagagtaaca 78327



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/43 (93%), Gaps = 2/43 (4%)
 Strand = Plus / Minus

                                                        
Query: 121   tatacacaacgggctctcacaggttataggcctccaaagaggc 163
             ||||||||||||||||||| |  ||||||||||||||||||||
Sbjct: 78602 tatacacaacgggctctcaga--ttataggcctccaaagaggc 78562



to top

>ref|XM_476765.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2368

 Score =  101 bits (51), Expect = 3e-18
 Identities = 180/223 (80%)
 Strand = Plus / Minus

                                                                        
Query: 471  atgtaaagattcttggcccatttctccttcacatggttgcttgggaaagccgatgttctg 530
            ||||| ||||| || |||||||| ||||| ||||| || || ||||| || || || | |
Sbjct: 2096 atgtacagatttttcgcccatttatccttgacatgattactggggaaggcagaggtccgg 2037

                                                                        
Query: 531  agagtttcttgtgtctcgtccatcaattttcttttgggaatgctcaatataaaagcagct 590
            |||||||||||||||||||| |     || | ||| || |||||||| ||||||||||| 
Sbjct: 2036 agagtttcttgtgtctcgtctactggcttccgtttcggtatgctcaagataaaagcagcc 1977

                                                                        
Query: 591  tgatcaccagtggctgctgtagaagttattctatatccattctcccatcgtcggtggatc 650
            || |||   || |||||| | || |||||||| || ||| |||||||||| || ||||| 
Sbjct: 1976 tggtcatttgttgctgctattgaggttattctgtaaccagtctcccatcgccgatggatg 1917

                                                       
Query: 651  ccttcactgggataaagaaaatccaattctactacctgttcag 693
            |||||||| ||||| || |||||||||||||| ||||||||||
Sbjct: 1916 ccttcacttggatataggaaatccaattctacaacctgttcag 1874



to top

>ref|XM_506188.1| PREDICTED Oryza sativa (japonica cultivar-group), P0496D04.2 patrial
            mRNA
          Length = 2394

 Score =  101 bits (51), Expect = 3e-18
 Identities = 180/223 (80%)
 Strand = Plus / Minus

                                                                        
Query: 471  atgtaaagattcttggcccatttctccttcacatggttgcttgggaaagccgatgttctg 530
            ||||| ||||| || |||||||| ||||| ||||| || || ||||| || || || | |
Sbjct: 2096 atgtacagatttttcgcccatttatccttgacatgattactggggaaggcagaggtccgg 2037

                                                                        
Query: 531  agagtttcttgtgtctcgtccatcaattttcttttgggaatgctcaatataaaagcagct 590
            |||||||||||||||||||| |     || | ||| || |||||||| ||||||||||| 
Sbjct: 2036 agagtttcttgtgtctcgtctactggcttccgtttcggtatgctcaagataaaagcagcc 1977

                                                                        
Query: 591  tgatcaccagtggctgctgtagaagttattctatatccattctcccatcgtcggtggatc 650
            || |||   || |||||| | || |||||||| || ||| |||||||||| || ||||| 
Sbjct: 1976 tggtcatttgttgctgctattgaggttattctgtaaccagtctcccatcgccgatggatg 1917

                                                       
Query: 651  ccttcactgggataaagaaaatccaattctactacctgttcag 693
            |||||||| ||||| || |||||||||||||| ||||||||||
Sbjct: 1916 ccttcacttggatataggaaatccaattctacaacctgttcag 1874



to top

>dbj|AK100663.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112C11, full
            insert sequence
          Length = 2677

 Score =  101 bits (51), Expect = 3e-18
 Identities = 180/223 (80%)
 Strand = Plus / Minus

                                                                        
Query: 471  atgtaaagattcttggcccatttctccttcacatggttgcttgggaaagccgatgttctg 530
            ||||| ||||| || |||||||| ||||| ||||| || || ||||| || || || | |
Sbjct: 2379 atgtacagatttttcgcccatttatccttgacatgattactggggaaggcagaggtccgg 2320

                                                                        
Query: 531  agagtttcttgtgtctcgtccatcaattttcttttgggaatgctcaatataaaagcagct 590
            |||||||||||||||||||| |     || | ||| || |||||||| ||||||||||| 
Sbjct: 2319 agagtttcttgtgtctcgtctactggcttccgtttcggtatgctcaagataaaagcagcc 2260

                                                                        
Query: 591  tgatcaccagtggctgctgtagaagttattctatatccattctcccatcgtcggtggatc 650
            || |||   || |||||| | || |||||||| || ||| |||||||||| || ||||| 
Sbjct: 2259 tggtcatttgttgctgctattgaggttattctgtaaccagtctcccatcgccgatggatg 2200

                                                       
Query: 651  ccttcactgggataaagaaaatccaattctactacctgttcag 693
            |||||||| ||||| || |||||||||||||| ||||||||||
Sbjct: 2199 ccttcacttggatataggaaatccaattctacaacctgttcag 2157



to top

>dbj|AK066357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062K19, full
            insert sequence
          Length = 2647

 Score =  101 bits (51), Expect = 3e-18
 Identities = 180/223 (80%)
 Strand = Plus / Minus

                                                                        
Query: 471  atgtaaagattcttggcccatttctccttcacatggttgcttgggaaagccgatgttctg 530
            ||||| ||||| || |||||||| ||||| ||||| || || ||||| || || || | |
Sbjct: 2375 atgtacagatttttcgcccatttatccttgacatgattactggggaaggcagaggtccgg 2316

                                                                        
Query: 531  agagtttcttgtgtctcgtccatcaattttcttttgggaatgctcaatataaaagcagct 590
            |||||||||||||||||||| |     || | ||| || |||||||| ||||||||||| 
Sbjct: 2315 agagtttcttgtgtctcgtctactggcttccgtttcggtatgctcaagataaaagcagcc 2256

                                                                        
Query: 591  tgatcaccagtggctgctgtagaagttattctatatccattctcccatcgtcggtggatc 650
            || |||   || |||||| | || |||||||| || ||| |||||||||| || ||||| 
Sbjct: 2255 tggtcatttgttgctgctattgaggttattctgtaaccagtctcccatcgccgatggatg 2196

                                                       
Query: 651  ccttcactgggataaagaaaatccaattctactacctgttcag 693
            |||||||| ||||| || |||||||||||||| ||||||||||
Sbjct: 2195 ccttcacttggatataggaaatccaattctacaacctgttcag 2153



to top

>ref|XM_469960.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2723

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 176/218 (80%)
 Strand = Plus / Minus

                                                                        
Query: 471  atgtaaagattcttggcccatttctccttcacatggttgcttgggaaagccgatgttctg 530
            ||||| || ||||| | |||||| ||||| ||||||||||| || || |  || ||||  
Sbjct: 2330 atgtataggttctttgaccatttttccttgacatggttgctgggaaaggaggaagttcga 2271

                                                                        
Query: 531  agagtttcttgtgtctcgtccatcaattttcttttgggaatgctcaatataaaagcagct 590
            |||||||||||||||||||||||    || || || || |||||||| || || ||||||
Sbjct: 2270 agagtttcttgtgtctcgtccattggcttcctctttggtatgctcaagatgaaggcagct 2211

                                                                        
Query: 591  tgatcaccagtggctgctgtagaagttattctatatccattctcccatcgtcggtggatc 650
            || |||  ||| ||||| || ||||||||||| || ||  |||||||||| || ||||||
Sbjct: 2210 tggtcaggagttgctgcagtcgaagttattctgtaacctgtctcccatcgccgatggatc 2151

                                                  
Query: 651  ccttcactgggataaagaaaatccaattctactacctg 688
            |||||||| ||||| ||||| ||||| ||||| |||||
Sbjct: 2150 ccttcacttggatatagaaagtccaactctaccacctg 2113



to top

>dbj|AK121620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044P16, full
            insert sequence
          Length = 2724

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 176/218 (80%)
 Strand = Plus / Minus

                                                                        
Query: 471  atgtaaagattcttggcccatttctccttcacatggttgcttgggaaagccgatgttctg 530
            ||||| || ||||| | |||||| ||||| ||||||||||| || || |  || ||||  
Sbjct: 2331 atgtataggttctttgaccatttttccttgacatggttgctgggaaaggaggaagttcga 2272

                                                                        
Query: 531  agagtttcttgtgtctcgtccatcaattttcttttgggaatgctcaatataaaagcagct 590
            |||||||||||||||||||||||    || || || || |||||||| || || ||||||
Sbjct: 2271 agagtttcttgtgtctcgtccattggcttcctctttggtatgctcaagatgaaggcagct 2212

                                                                        
Query: 591  tgatcaccagtggctgctgtagaagttattctatatccattctcccatcgtcggtggatc 650
            || |||  ||| ||||| || ||||||||||| || ||  |||||||||| || ||||||
Sbjct: 2211 tggtcaggagttgctgcagtcgaagttattctgtaacctgtctcccatcgccgatggatc 2152

                                                  
Query: 651  ccttcactgggataaagaaaatccaattctactacctg 688
            |||||||| ||||| ||||| ||||| ||||| |||||
Sbjct: 2151 ccttcacttggatatagaaagtccaactctaccacctg 2114



to top

>dbj|AK103407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128D14, full
            insert sequence
          Length = 2424

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 176/218 (80%)
 Strand = Plus / Minus

                                                                        
Query: 471  atgtaaagattcttggcccatttctccttcacatggttgcttgggaaagccgatgttctg 530
            ||||| || ||||| | |||||| ||||| ||||||||||| || || |  || ||||  
Sbjct: 2278 atgtataggttctttgaccatttttccttgacatggttgctgggaaaggaggaagttcga 2219

                                                                        
Query: 531  agagtttcttgtgtctcgtccatcaattttcttttgggaatgctcaatataaaagcagct 590
            |||||||||||||||||||||||    || || || || |||||||| || || ||||||
Sbjct: 2218 agagtttcttgtgtctcgtccattggcttcctctttggtatgctcaagatgaaggcagct 2159

                                                                        
Query: 591  tgatcaccagtggctgctgtagaagttattctatatccattctcccatcgtcggtggatc 650
            || |||  ||| ||||| || ||||||||||| || ||  |||||||||| || ||||||
Sbjct: 2158 tggtcaggagttgctgcagtcgaagttattctgtaacctgtctcccatcgccgatggatc 2099

                                                  
Query: 651  ccttcactgggataaagaaaatccaattctactacctg 688
            |||||||| ||||| ||||| ||||| ||||| |||||
Sbjct: 2098 ccttcacttggatatagaaagtccaactctaccacctg 2061



to top

>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete
             sequence
          Length = 162497

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 130/158 (82%)
 Strand = Plus / Plus

                                                                         
Query: 531   agagtttcttgtgtctcgtccatcaattttcttttgggaatgctcaatataaaagcagct 590
             |||||||||||||||||||||||    || || || || |||||||| || || ||||||
Sbjct: 41500 agagtttcttgtgtctcgtccattggcttcctctttggtatgctcaagatgaaggcagct 41559

                                                                         
Query: 591   tgatcaccagtggctgctgtagaagttattctatatccattctcccatcgtcggtggatc 650
             || |||  ||| ||||| || ||||||||||| || ||  |||||||||| || ||||||
Sbjct: 41560 tggtcaggagttgctgcagtcgaagttattctgtaacctgtctcccatcgccgatggatc 41619

                                                   
Query: 651   ccttcactgggataaagaaaatccaattctactacctg 688
             |||||||| ||||| ||||| ||||| ||||| |||||
Sbjct: 41620 ccttcacttggatatagaaagtccaactctaccacctg 41657



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                            
Query: 531      agagtttcttgtgtctcgtccatcaattttcttttgggaatgctcaatataaaagcagct 590
                |||||||||||||||||||||||    || || || || |||||||| || || ||||||
Sbjct: 32702407 agagtttcttgtgtctcgtccattggcttcctctttggtatgctcaagatgaaggcagct 32702348

                                                                            
Query: 591      tgatcaccagtggctgctgtagaagttattctatatccattctcccatcgtcggtggatc 650
                || |||  ||| ||||| || ||||||||||| || ||  |||||||||| || ||||||
Sbjct: 32702347 tggtcaggagttgctgcagtcgaagttattctgtaacctgtctcccatcgccgatggatc 32702288

                                                      
Query: 651      ccttcactgggataaagaaaatccaattctactacctg 688
                |||||||| ||||| ||||| ||||| ||||| |||||
Sbjct: 32702287 ccttcacttggatatagaaagtccaactctaccacctg 32702250



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                            
Query: 531      agagtttcttgtgtctcgtccatcaattttcttttgggaatgctcaatataaaagcagct 590
                |||||||||||||||||||||||    || || || || |||||||| || || ||||||
Sbjct: 32792917 agagtttcttgtgtctcgtccattggcttcctctttggtatgctcaagatgaaggcagct 32792858

                                                                            
Query: 591      tgatcaccagtggctgctgtagaagttattctatatccattctcccatcgtcggtggatc 650
                || |||  ||| ||||| || ||||||||||| || ||  |||||||||| || ||||||
Sbjct: 32792857 tggtcaggagttgctgcagtcgaagttattctgtaacctgtctcccatcgccgatggatc 32792798

                                                      
Query: 651      ccttcactgggataaagaaaatccaattctactacctg 688
                |||||||| ||||| ||||| ||||| ||||| |||||
Sbjct: 32792797 ccttcacttggatatagaaagtccaactctaccacctg 32792760



to top

>ref|NM_111265.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
            serine/threonine kinase AT3G03940 mRNA, complete cds
          Length = 2629

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 122/150 (81%)
 Strand = Plus / Minus

                                                                        
Query: 447  gtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttcacatgg 506
            ||||| ||||||||||| || |||||||| ||||| || |||||||||||||| ||||||
Sbjct: 2465 gtccgaccatagcatattgatgcaatgtacagatttttcgcccatttctccttgacatgg 2406

                                                                        
Query: 507  ttgcttgggaaagccgatgttctgagagtttcttgtgtctcgtccatcaattttcttttg 566
             | |||||||| || || || | |||||| ||||| || || ||  | | ||||| ||| 
Sbjct: 2405 gtacttgggaaggcagaagtccggagagtctcttgggtttcatcggttatttttcgttta 2346

                                          
Query: 567  ggaatgctcaatataaaagcagcttgatca 596
            || || |||||||||| ||| |||||||||
Sbjct: 2345 ggtatactcaatataagagctgcttgatca 2316



to top

>gb|AY128325.1| Arabidopsis thaliana putative casein kinase (At3g03940) mRNA,
           complete cds
          Length = 1287

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 122/150 (81%)
 Strand = Plus / Minus

                                                                       
Query: 447 gtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttcacatgg 506
           ||||| ||||||||||| || |||||||| ||||| || |||||||||||||| ||||||
Sbjct: 914 gtccgaccatagcatattgatgcaatgtacagatttttcgcccatttctccttgacatgg 855

                                                                       
Query: 507 ttgcttgggaaagccgatgttctgagagtttcttgtgtctcgtccatcaattttcttttg 566
            | |||||||| || || || | |||||| ||||| || || ||  | | ||||| ||| 
Sbjct: 854 gtacttgggaaggcagaagtccggagagtctcttgggtttcatcggttatttttcgttta 795

                                         
Query: 567 ggaatgctcaatataaaagcagcttgatca 596
           || || |||||||||| ||| |||||||||
Sbjct: 794 ggtatactcaatataagagctgcttgatca 765



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 128/158 (81%)
 Strand = Plus / Minus

                                                                           
Query: 530     gagagtttcttgtgtctcgtccatcaattttcttttgggaatgctcaatataaaagcagc 589
               ||||||||||||||||||||| |     || | ||| || |||||||| |||||||||||
Sbjct: 3811485 gagagtttcttgtgtctcgtctactggcttccgtttcggtatgctcaagataaaagcagc 3811426

                                                                           
Query: 590     ttgatcaccagtggctgctgtagaagttattctatatccattctcccatcgtcggtggat 649
                || |||   || |||||| | || |||||||| || ||| |||||||||| || |||||
Sbjct: 3811425 ctggtcatttgttgctgctattgaggttattctgtaaccagtctcccatcgccgatggat 3811366

                                                     
Query: 650     cccttcactgggataaagaaaatccaattctactacct 687
                |||||||| ||||| || |||||||||||||| ||||
Sbjct: 3811365 gccttcacttggatataggaaatccaattctacaacct 3811328



to top

>emb|BX825856.1|CNS0A7N4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL68ZE07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 690

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 122/150 (81%)
 Strand = Plus / Minus

                                                                       
Query: 447 gtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttcacatgg 506
           ||||| ||||||||||| || |||||||| ||||| || |||||||||||||| ||||||
Sbjct: 323 gtccgaccatagcatattgatgcaatgtacagatttttcgcccatttctccttgacatgg 264

                                                                       
Query: 507 ttgcttgggaaagccgatgttctgagagtttcttgtgtctcgtccatcaattttcttttg 566
            | |||||||| || || || | |||||| ||||| || || ||  | | ||||| ||| 
Sbjct: 263 gtacttgggaaggcagaagtccggagagtctcttgggtttcatcggttatttttcgttta 204

                                         
Query: 567 ggaatgctcaatataaaagcagcttgatca 596
           || || |||||||||| ||| |||||||||
Sbjct: 203 ggtatactcaatataagagctgcttgatca 174



to top

>emb|BX823466.1|CNS0A6MY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS41ZC04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 874

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 122/150 (81%)
 Strand = Plus / Minus

                                                                       
Query: 447 gtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttcacatgg 506
           ||||| ||||||||||| || |||||||| ||||| || |||||||||||||| ||||||
Sbjct: 477 gtccgaccatagcatattgatgcaatgtacagatttttcgcccatttctccttgacatgg 418

                                                                       
Query: 507 ttgcttgggaaagccgatgttctgagagtttcttgtgtctcgtccatcaattttcttttg 566
            | |||||||| || || || | |||||| ||||| || || ||  | | ||||| ||| 
Sbjct: 417 gtacttgggaaggcagaagtccggagagtctcttgggtttcatcggttatttttcgttta 358

                                         
Query: 567 ggaatgctcaatataaaagcagcttgatca 596
           || || |||||||||| ||| |||||||||
Sbjct: 357 ggtatactcaatataagagctgcttgatca 328



to top

>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0496D04
          Length = 197358

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 128/158 (81%)
 Strand = Plus / Minus

                                                                         
Query: 530   gagagtttcttgtgtctcgtccatcaattttcttttgggaatgctcaatataaaagcagc 589
             ||||||||||||||||||||| |     || | ||| || |||||||| |||||||||||
Sbjct: 50597 gagagtttcttgtgtctcgtctactggcttccgtttcggtatgctcaagataaaagcagc 50538

                                                                         
Query: 590   ttgatcaccagtggctgctgtagaagttattctatatccattctcccatcgtcggtggat 649
              || |||   || |||||| | || |||||||| || ||| |||||||||| || |||||
Sbjct: 50537 ctggtcatttgttgctgctattgaggttattctgtaaccagtctcccatcgccgatggat 50478

                                                   
Query: 650   cccttcactgggataaagaaaatccaattctactacct 687
              |||||||| ||||| || |||||||||||||| ||||
Sbjct: 50477 gccttcacttggatataggaaatccaattctacaacct 50440



to top

>dbj|AK100357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083K12, full
            insert sequence
          Length = 2696

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 90/109 (82%)
 Strand = Plus / Minus

                                                                        
Query: 436  ctcacgacaccgtccgcccatagcatatagaggcaatgtaaagattcttggcccatttct 495
            |||| |||||||| |  |||||||| || || || | |||||||||||| | ||||||||
Sbjct: 2093 ctcatgacaccgttcttccatagcaaatggaagctaggtaaagattcttcgaccatttct 2034

                                                             
Query: 496  ccttcacatggttgcttgggaaagccgatgttctgagagtttcttgtgt 544
            |||||||||| | ||| |||||||| ||||| || || ||||| |||||
Sbjct: 2033 ccttcacatgctggctggggaaagcagatgtcctcagggtttcctgtgt 1985



to top

>dbj|AK072116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126I12, full
            insert sequence
          Length = 2431

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 90/109 (82%)
 Strand = Plus / Minus

                                                                        
Query: 436  ctcacgacaccgtccgcccatagcatatagaggcaatgtaaagattcttggcccatttct 495
            |||| |||||||| |  |||||||| || || || | |||||||||||| | ||||||||
Sbjct: 2090 ctcatgacaccgttcttccatagcaaatggaagctaggtaaagattcttcgaccatttct 2031

                                                             
Query: 496  ccttcacatggttgcttgggaaagccgatgttctgagagtttcttgtgt 544
            |||||||||| | ||| |||||||| ||||| || || ||||| |||||
Sbjct: 2030 ccttcacatgctggctggggaaagcagatgtcctcagggtttcctgtgt 1982



to top

>ref|NM_128136.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
            serine/threonine kinase AT2G25760 transcript variant
            AT2G25760.1 mRNA, complete cds
          Length = 2604

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                        
Query: 468  gcaatgtaaagattcttggcccatttctccttcacatggttgcttgggaaagccgatgtt 527
            |||||||||||||||||| ||||||| ||||| ||||| || || || ||||| || |||
Sbjct: 2263 gcaatgtaaagattcttgccccatttttccttgacatgattactaggaaaagcagaggtt 2204

                                
Query: 528  ctgagagtttcttgtgtctc 547
            || ||||| || ||||||||
Sbjct: 2203 ctaagagtctcctgtgtctc 2184



to top

>ref|NM_201803.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
            serine/threonine kinase AT2G25760 transcript variant
            AT2G25760.2 mRNA, complete cds
          Length = 2613

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                        
Query: 468  gcaatgtaaagattcttggcccatttctccttcacatggttgcttgggaaagccgatgtt 527
            |||||||||||||||||| ||||||| ||||| ||||| || || || ||||| || |||
Sbjct: 2272 gcaatgtaaagattcttgccccatttttccttgacatgattactaggaaaagcagaggtt 2213

                                
Query: 528  ctgagagtttcttgtgtctc 547
            || ||||| || ||||||||
Sbjct: 2212 ctaagagtctcctgtgtctc 2193



to top

>ref|XM_476111.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1827

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                        
Query: 473  gtaaagattcttggcccatttctccttcacatggttgcttgggaaagccgatgttctgag 532
            |||||||||||| | |||||||||||||||||| | ||| |||||||| ||||| || ||
Sbjct: 1791 gtaaagattcttcgaccatttctccttcacatgctggctggggaaagcagatgtcctcag 1732

                        
Query: 533  agtttcttgtgt 544
             ||||| |||||
Sbjct: 1731 ggtttcctgtgt 1720



to top

>gb|AY070056.1| Arabidopsis thaliana At2g25760 mRNA sequence
          Length = 2695

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                        
Query: 468  gcaatgtaaagattcttggcccatttctccttcacatggttgcttgggaaagccgatgtt 527
            |||||||||||||||||| ||||||| ||||| ||||| || || || ||||| || |||
Sbjct: 2413 gcaatgtaaagattcttgccccatttttccttgacatgattactaggaaaagcagaggtt 2354

                                
Query: 528  ctgagagtttcttgtgtctc 547
            || ||||| || ||||||||
Sbjct: 2353 ctaagagtctcctgtgtctc 2334



to top

>gb|AY106527.1| Zea mays PCO139661 mRNA sequence
          Length = 1156

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 171/218 (78%)
 Strand = Plus / Minus

                                                                       
Query: 471 atgtaaagattcttggcccatttctccttcacatggttgcttgggaaagccgatgttctg 530
           ||||| |||||||| |||||||||||||| |||||    || || || || || || | |
Sbjct: 816 atgtagagattcttcgcccatttctccttgacatgtgaactgggaaaggcagaggtccgg 757

                                                                       
Query: 531 agagtttcttgtgtctcgtccatcaattttcttttgggaatgctcaatataaaagcagct 590
           || |||||||| ||||||||||||   || |  || || |||||||| || |||||||||
Sbjct: 756 agggtttcttgcgtctcgtccatcggcttccgctttggcatgctcaagatgaaagcagct 697

                                                                       
Query: 591 tgatcaccagtggctgctgtagaagttattctatatccattctcccatcgtcggtggatc 650
           || |||   ||||| ||||| |||||||| || || ||| |||||||||| || ||||| 
Sbjct: 696 tggtcattggtggccgctgtggaagttatcctgtaaccactctcccatcgccgatggatg 637

                                                 
Query: 651 ccttcactgggataaagaaaatccaattctactacctg 688
           ||||| || || || || || ||||| ||||| |||||
Sbjct: 636 ccttcgctagggtacaggaagtccaactctacaacctg 599



to top

>dbj|AK102819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N21, full
            insert sequence
          Length = 2398

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                        
Query: 453  ccatagcatatagaggcaatgtaaagattcttggcccatttctccttcacatggttgctt 512
            ||||||||||  || |||| ||| |||||||||| |||||||||||| ||||| |  || 
Sbjct: 2059 ccatagcatactgatgcaaggtagagattcttggaccatttctccttgacatgttgacta 2000

                             
Query: 513  gggaaagccgatgttct 529
            |||||||| ||||||||
Sbjct: 1999 gggaaagcagatgttct 1983



to top

>gb|BT014172.1| Lycopersicon esculentum clone 133312F, mRNA sequence
          Length = 1365

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 450 cgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttcacatg 505
           |||||||| || ||||| |||| ||||||||| || |||||||||||||| |||||
Sbjct: 880 cgcccataacagatagatgcaaggtaaagattttttgcccatttctccttgacatg 825



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                       
Query: 582 aaagcagcttgatcaccagtggctgctgtagaagttattctatatccattctcccatcgt 641
           |||||||||||||| |  |||||||| || || || || |||||||||   |||||||  
Sbjct: 748 aaagcagcttgatcccatgtggctgcagttgacgtaatcctatatccagcatcccatctc 689

                                                          
Query: 642 cggtggatcccttcactgggataaagaaaatccaattctactacctg 688
           |  |||| ||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 688 ctatggaccccttcactaggatagagaaaatctaattccaccacctg 642



to top

>gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC F20H23 genomic sequence,
            complete sequence
          Length = 101410

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 447  gtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctcct 498
            ||||| ||||||||||| || |||||||| ||||| || |||||||||||||
Sbjct: 2609 gtccgaccatagcatattgatgcaatgtacagatttttcgcccatttctcct 2558



to top

>gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC T11I18 genomic sequence,
             complete sequence
          Length = 63654

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 447   gtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctcct 498
             ||||| ||||||||||| || |||||||| ||||| || |||||||||||||
Sbjct: 11063 gtccgaccatagcatattgatgcaatgtacagatttttcgcccatttctcct 11114



to top

>gb|AF302261.1|AF302261 Brassica napus BcNA1 gene, promoter sequence
          Length = 1752

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 453 ccatagcatatagaggcaatgtaaagattcttggcccatttctcct 498
           ||||||||||| || |||||||| |||||||| |||||||| ||||
Sbjct: 989 ccatagcatattgatgcaatgtacagattcttcgcccatttgtcct 944



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 570 atgctcaatataaaagcagcttgatcaccagtggctgctgtagaagttattctatatcca 629
           ||||| ||||| ||||| ||||||||  |||| |||||  | || ||||||||||| |||
Sbjct: 778 atgcttaatatgaaagctgcttgatccgcagttgctgccattgatgttattctataccca 719

                   
Query: 630 ttctccca 637
           ||||||||
Sbjct: 718 ttctccca 711



to top

>gb|M64633.1|BNANAPINC Brassica napus (clone BnNa) DNA sequence
          Length = 4338

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 453  ccatagcatatagaggcaatgtaaagattcttggcccatttctcct 498
            ||||||||||| || |||||||| |||||||| |||||||| ||||
Sbjct: 1396 ccatagcatattgatgcaatgtacagattcttcgcccatttgtcct 1351



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 570  atgctcaatataaaagcagcttgatcaccagtggctgctgtagaagttattctatatcca 629
            ||||| ||||| ||||| ||||||||  |||| |||||  | || ||||||||||| |||
Sbjct: 1181 atgcttaatatgaaagctgcttgatccgcagttgctgccattgatgttattctataccca 1122

                    
Query: 630  ttctccca 637
            ||||||||
Sbjct: 1121 ttctccca 1114



to top

>gb|M64632.1|BNANAPINB Brassica campestris (clone lambda GCN1-2) napin gene, complete cds
          Length = 4329

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 453  ccatagcatatagaggcaatgtaaagattcttggcccatttctcct 498
            ||||||||||| || |||||||| |||||||| |||||||| ||||
Sbjct: 1391 ccatagcatattgatgcaatgtacagattcttcgcccatttgtcct 1346



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 570  atgctcaatataaaagcagcttgatcaccagtggctgctgtagaagttattctatatcca 629
            ||||| ||||| ||||| ||||||||  |||| |||||  | || ||||||||||| |||
Sbjct: 1180 atgcttaatatgaaagctgcttgatccgcagttgctgccattgatgttattctataccca 1121

                    
Query: 630  ttctccca 637
            ||||||||
Sbjct: 1120 ttctccca 1113



to top

>gb|AF479055.1| Triticum aestivum casein kinase-like protein mRNA, partial cds
          Length = 345

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 453 ccatagcatatagaggcaatgtaaagattcttggcccatttctccttcacatggttgctt 512
           ||||||||||| || || | ||| ||||| || | |||||| ||||||||||| | ||| 
Sbjct: 329 ccatagcatatggatgctaagtacagattttttgaccatttttccttcacatgctggctc 270

                            
Query: 513 gggaaagccgatgttct 529
           |||||||| ||||||||
Sbjct: 269 gggaaagcagatgttct 253



to top

>gb|BT018029.1| Zea mays clone EL01N0530B07.c mRNA sequence
          Length = 1186

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 191/247 (77%)
 Strand = Plus / Minus

                                                                       
Query: 442 acaccgtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttca 501
           |||| ||||||||  |||| || || || ||||| || |||||||||||||||||||| |
Sbjct: 911 acacggtccgcccgaagcaaatcgaagcgatgtagaggttcttggcccatttctccttga 852

                                                                       
Query: 502 catggttgcttgggaaagccgatgttctgagagtttcttgtgtctcgtccatcaattttc 561
           | ||   ||| ||||| || || || |  || ||||| |||||||||||||||   || |
Sbjct: 851 cgtgtgagctggggaaggcggaggtccgcagcgtttcctgtgtctcgtccatcggcttcc 792

                                                                       
Query: 562 ttttgggaatgctcaatataaaagcagcttgatcaccagtggctgctgtagaagttattc 621
            ||| || |||||||  || ||||| ||||| ||    |||||||| || |||||||| |
Sbjct: 791 gtttcggcatgctcaggatgaaagcggcttggtcgttggtggctgccgtggaagttatcc 732

                                                                       
Query: 622 tatatccattctcccatcgtcggtggatcccttcactgggataaagaaaatccaattcta 681
           | || ||  ||||||| || |||||||| || || ||||| || || |||||||| ||||
Sbjct: 731 tgtagccgctctcccagcgccggtggatgccctcgctggggtacaggaaatccaactcta 672

                  
Query: 682 ctacctg 688
           | |||||
Sbjct: 671 caacctg 665



to top

>gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 map B68, complete
             sequence
          Length = 102004

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 468   gcaatgtaaagattcttggcccatttctcct 498
             |||||||||||||||||| ||||||| ||||
Sbjct: 90823 gcaatgtaaagattcttgccccatttttcct 90793



to top

>gb|BT024085.1| Zea mays clone EL01N0553E07 mRNA sequence
          Length = 2607

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 191/247 (77%)
 Strand = Plus / Minus

                                                                        
Query: 442  acaccgtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttca 501
            |||| ||||||||  |||| || || || ||||| || |||||||||||||||||||| |
Sbjct: 2323 acacggtccgcccgaagcaaatcgaagcgatgtagaggttcttggcccatttctccttga 2264

                                                                        
Query: 502  catggttgcttgggaaagccgatgttctgagagtttcttgtgtctcgtccatcaattttc 561
            | ||   ||| ||||| || || || |  || ||||| |||||||||||||||   || |
Sbjct: 2263 cgtgtgagctggggaaggcggaggtccgcagcgtttcctgtgtctcgtccatcggcttcc 2204

                                                                        
Query: 562  ttttgggaatgctcaatataaaagcagcttgatcaccagtggctgctgtagaagttattc 621
             ||| || |||||||  || ||||| ||||| ||    |||||||| || |||||||| |
Sbjct: 2203 gtttcggcatgctcaggatgaaagcggcttggtcgttggtggctgccgtggaagttatcc 2144

                                                                        
Query: 622  tatatccattctcccatcgtcggtggatcccttcactgggataaagaaaatccaattcta 681
            | || ||  ||||||| || |||||||| || || ||||| || || |||||||| ||||
Sbjct: 2143 tgtagccgctctcccagcgccggtggatgccctcgctggggtacaggaaatccaactcta 2084

                   
Query: 682  ctacctg 688
            | |||||
Sbjct: 2083 caacctg 2077



to top

>gb|AY108079.1| Zea mays PCO139663 mRNA sequence
          Length = 985

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 191/247 (77%)
 Strand = Plus / Minus

                                                                       
Query: 442 acaccgtccgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttca 501
           |||| ||||||||  |||| || || || ||||| || |||||||||||||||||||| |
Sbjct: 696 acacggtccgcccgaagcaaatcgaagcgatgtagaggttcttggcccatttctccttga 637

                                                                       
Query: 502 catggttgcttgggaaagccgatgttctgagagtttcttgtgtctcgtccatcaattttc 561
           | ||   ||| ||||| || || || |  || ||||| |||||||||||||||   || |
Sbjct: 636 cgtgtgagctggggaaggcggaggtccgcagcgtttcctgtgtctcgtccatcggcttcc 577

                                                                       
Query: 562 ttttgggaatgctcaatataaaagcagcttgatcaccagtggctgctgtagaagttattc 621
            ||| || |||||||  || ||||| ||||| ||    |||||||| || |||||||| |
Sbjct: 576 gtttcggcatgctcaggatgaaagcggcttggtcgttggtggctgccgtggaagttatcc 517

                                                                       
Query: 622 tatatccattctcccatcgtcggtggatcccttcactgggataaagaaaatccaattcta 681
           | || ||  ||||||| || |||||||| || || ||||| || || |||||||| ||||
Sbjct: 516 tgtagccgctctcccagcgccggtggatgccctcgctggggtacaggaaatccaactcta 457

                  
Query: 682 ctacctg 688
           | |||||
Sbjct: 456 caacctg 450



to top

>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0439E07
          Length = 176486

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                            
Query: 453    ccatagcatatagaggcaatgtaaagattcttggcccatttctcct 498
              ||||||||||  || |||| ||| |||||||||| |||||||||||
Sbjct: 161893 ccatagcatactgatgcaaggtagagattcttggaccatttctcct 161938



to top

>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0014K08
          Length = 177263

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 453   ccatagcatatagaggcaatgtaaagattcttggcccatttctcct 498
             ||||||||||  || |||| ||| |||||||||| |||||||||||
Sbjct: 31259 ccatagcatactgatgcaaggtagagattcttggaccatttctcct 31304



to top

>ref|NM_188260.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1866

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                        
Query: 600  gtggctgctgtagaagttattctatatccattctcccatcgtcggtggatcccttcactg 659
            ||||||||||| | |||||| | ||| ||| | ||||| ||| | ||||| |||||||| 
Sbjct: 1703 gtggctgctgttgcagttatgcgataaccactatcccagcgttgatggattccttcactc 1644

                                         
Query: 660  ggataaagaaaatccaattctactacctg 688
            ||||| |  ||||| | ||||||||||||
Sbjct: 1643 ggatataagaaatcaagttctactacctg 1615



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 544    tctcgtccatcaattttcttt 564
              |||||||||||||||||||||
Sbjct: 528382 tctcgtccatcaattttcttt 528362



to top

>dbj|AK103403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128C13, full
            insert sequence
          Length = 2211

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                        
Query: 600  gtggctgctgtagaagttattctatatccattctcccatcgtcggtggatcccttcactg 659
            ||||||||||| | |||||| | ||| ||| | ||||| ||| | ||||| |||||||| 
Sbjct: 1954 gtggctgctgttgcagttatgcgataaccactatcccagcgttgatggattccttcactc 1895

                                         
Query: 660  ggataaagaaaatccaattctactacctg 688
            ||||| |  ||||| | ||||||||||||
Sbjct: 1894 ggatataagaaatcaagttctactacctg 1866



to top

>dbj|AK099617.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051B07, full
           insert sequence
          Length = 1213

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                       
Query: 600 gtggctgctgtagaagttattctatatccattctcccatcgtcggtggatcccttcactg 659
           ||||||||||| | |||||| | ||| ||| | ||||| ||| | ||||| |||||||| 
Sbjct: 944 gtggctgctgttgcagttatgcgataaccactatcccagcgttgatggattccttcactc 885

                                        
Query: 660 ggataaagaaaatccaattctactacctg 688
           ||||| |  ||||| | ||||||||||||
Sbjct: 884 ggatataagaaatcaagttctactacctg 856



to top

>gb|AY112140.1| Zea mays CL67806_1 mRNA sequence
          Length = 434

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 490 atttctccttcacatggttgcttgggaaagccgatgttctgagagtttc 538
           |||| ||||||||||| | ||| |||||||| || ||||| ||||||||
Sbjct: 247 atttgtccttcacatgctggctggggaaagcagacgttcttagagtttc 295



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 625 atccattctcccatcgtcggtggatcccttcactgggata 664
           ||||||| ||||||||||| ||||| || ||||| |||||
Sbjct: 382 atccattatcccatcgtcgatggataccctcacttggata 421



to top

>dbj|AK060271.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-E10, full
            insert sequence
          Length = 1581

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                        
Query: 600  gtggctgctgtagaagttattctatatccattctcccatcgtcggtggatcccttcactg 659
            ||||||||||| | |||||| | ||| ||| | ||||| ||| | ||||| |||||||| 
Sbjct: 1345 gtggctgctgttgcagttatgcgataaccactatcccagcgttgatggattccttcactc 1286

                                         
Query: 660  ggataaagaaaatccaattctactacctg 688
            ||||| |  ||||| | ||||||||||||
Sbjct: 1285 ggatataagaaatcaagttctactacctg 1257



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 544    tctcgtccatcaattttcttt 564
              |||||||||||||||||||||
Sbjct: 528382 tctcgtccatcaattttcttt 528362



to top

>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 130544

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 544   tctcgtccatcaattttcttt 564
             |||||||||||||||||||||
Sbjct: 41930 tctcgtccatcaattttcttt 41950



to top

>gb|AC133102.4| Mus musculus BAC clone RP23-173H19 from 1, complete sequence
          Length = 199590

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 401   tgctcagccctcactgagttg 421
             |||||||||||||||||||||
Sbjct: 81473 tgctcagccctcactgagttg 81493



to top

>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a,
             complete sequence
          Length = 77969

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 651   ccttcactgggataaagaaaatccaattctactacct 687
             |||||||||||||| |||||||| | |||||| ||||
Sbjct: 37173 ccttcactgggatacagaaaatcaagttctacaacct 37137



to top

>ref|NM_119763.2| Arabidopsis thaliana L-ascorbate peroxidase/ peroxidase AT4G35970
           mRNA, complete cds
          Length = 973

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 525 gttctgagagtttcttgtgt 544
           ||||||||||||||||||||
Sbjct: 763 gttctgagagtttcttgtgt 744



to top

>gb|AC113005.10| Mus musculus chromosome 3, clone RP23-299B23, complete sequence
          Length = 218917

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     aaaatgaaggacatgatagg 115
              ||||||||||||||||||||
Sbjct: 203339 aaaatgaaggacatgatagg 203320



to top

>gb|BT016369.1| Zea mays clone Contig202 mRNA sequence
          Length = 1110

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 450 cgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttcacatg 505
           ||||||||||||||    |||| ||| |||||||||||||| || ||||| |||||
Sbjct: 364 cgcccatagcatatcccagcaaggtagagattcttggcccacttgtccttgacatg 419



to top

>emb|CR762428.7| Zebrafish DNA sequence from clone CH211-172N16 in linkage group 1,
            complete sequence
          Length = 140219

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  ctgtaaagcagcagctggac 202
            ||||||||||||||||||||
Sbjct: 5844 ctgtaaagcagcagctggac 5825



to top

>gb|AC132094.3| Mus musculus BAC clone RP24-376B20 from chromosome 3, complete sequence
          Length = 124872

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    aaaatgaaggacatgatagg 115
             ||||||||||||||||||||
Sbjct: 18597 aaaatgaaggacatgatagg 18578



to top

>gb|AC124451.4| Mus musculus BAC clone RP24-218I3 from chromosome 9, complete sequence
          Length = 168315

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 573   ctcaatataaaagcagcttg 592
             ||||||||||||||||||||
Sbjct: 42324 ctcaatataaaagcagcttg 42343



to top

>gb|AC115122.4| Mus musculus BAC clone RP24-108L20 from chromosome 14, complete sequence
          Length = 163480

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    ctcttccatctgcttattgg 250
              ||||||||||||||||||||
Sbjct: 118845 ctcttccatctgcttattgg 118864



to top

>emb|BX936288.8| Platypus DNA sequence from clone XX-534O22, complete sequence
          Length = 153564

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   ttcatactctgtaaagcagc 194
             ||||||||||||||||||||
Sbjct: 15363 ttcatactctgtaaagcagc 15344



to top

>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    aagcaacaccagccggatca 224
              ||||||||||||||||||||
Sbjct: 886199 aagcaacaccagccggatca 886218



to top

>emb|AL359877.12| Human DNA sequence from clone RP11-179A4 on chromosome 9 Contains part
             of the C9orf93 gene for chromosome 9 open reading frame
             93, complete sequence
          Length = 164008

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   ttccatctgcttattggcta 253
             ||||||||||||||||||||
Sbjct: 35588 ttccatctgcttattggcta 35569



to top

>gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6 of 13 of the complete
             sequence
          Length = 250823

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ttagttacctcacataataa 46
             ||||||||||||||||||||
Sbjct: 30010 ttagttacctcacataataa 29991



to top

>emb|AL161727.15| Human DNA sequence from clone RP11-232A1 on chromosome 9 Contains a
             ribosomal protein S20 (RPS20) pseudogene and a novel
             pseudogene, complete sequence
          Length = 160109

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 652   cttcactgggataaagaaaa 671
             ||||||||||||||||||||
Sbjct: 29257 cttcactgggataaagaaaa 29276



to top

>gb|AF500198.1| Danio rerio fibronectin variant 3 mRNA, partial cds
          Length = 2025

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  ctgtaaagcagcagctggac 202
            ||||||||||||||||||||
Sbjct: 1240 ctgtaaagcagcagctggac 1221



to top

>gb|AF441714.1| Arabidopsis thaliana putative ascorbate peroxidase APX5 (AT4g35970)
           mRNA, partial cds
          Length = 784

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 525 gttctgagagtttcttgtgt 544
           ||||||||||||||||||||
Sbjct: 665 gttctgagagtttcttgtgt 646



to top

>ref|XM_793199.1| PREDICTED: Strongylocentrotus purpuratus similar to CG32018-PB,
           isoform B (LOC593730), mRNA
          Length = 1005

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 gcatcctcttccatctgctt 245
           ||||||||||||||||||||
Sbjct: 939 gcatcctcttccatctgctt 920



to top

>emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 84
          Length = 195452

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 525    gttctgagagtttcttgtgt 544
              ||||||||||||||||||||
Sbjct: 101841 gttctgagagtttcttgtgt 101822



to top

>emb|AL022373.1|ATT19K4 Arabidopsis thaliana DNA chromosome 4, BAC clone T19K4 (ESSAII project)
          Length = 106007

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 525   gttctgagagtttcttgtgt 544
             ||||||||||||||||||||
Sbjct: 36572 gttctgagagtttcttgtgt 36553



to top

>gb|AC096741.3| Homo sapiens BAC clone RP11-327O17 from 4, complete sequence
          Length = 177300

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   tttccacttacaaaatgaag 104
            ||||||||||||||||||||
Sbjct: 5757 tttccacttacaaaatgaag 5776



to top

>gb|AC010310.5| Homo sapiens chromosome 5 clone CTB-55B8, complete sequence
          Length = 243558

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    tactctggccatgatgtaag 313
              ||||||||||||||||||||
Sbjct: 222590 tactctggccatgatgtaag 222609



to top

>gb|AC010607.8| Homo sapiens chromosome 5 clone CTB-28D11, complete sequence
          Length = 131098

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   tactctggccatgatgtaag 313
             ||||||||||||||||||||
Sbjct: 37304 tactctggccatgatgtaag 37323



to top

>emb|CR387403.1| Gallus gallus finished cDNA, clone ChEST277k9
          Length = 816

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 atgctcagccctcactgagt 419
           ||||||||||||||||||||
Sbjct: 247 atgctcagccctcactgagt 266



to top

>gb|BT006053.1| Arabidopsis thaliana clone U51359 putative ascorbate peroxidase
           (At4g35970) mRNA, complete cds
          Length = 871

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 525 gttctgagagtttcttgtgt 544
           ||||||||||||||||||||
Sbjct: 718 gttctgagagtttcttgtgt 699



to top

>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1046G12
          Length = 163533

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                         
Query: 600   gtggctgctgtagaagttattctatatccattctcccatcgtcggtggatcccttcactg 659
             ||||||||||| | |||||| | ||| ||| | ||||| ||| | ||||| |||||||| 
Sbjct: 79747 gtggctgctgttgcagttatgcgataaccactatcccagcgttgatggattccttcactc 79806

                                         
Query: 660   ggataaagaaaatccaattctactacct 687
             ||||| |  ||||| | |||||||||||
Sbjct: 79807 ggatataagaaatcaagttctactacct 79834



to top

>gb|AC068483.6| Homo sapiens BAC clone RP11-31G7 from 2, complete sequence
          Length = 157285

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  gccctcactgagttggtgtg 426
            ||||||||||||||||||||
Sbjct: 5837 gccctcactgagttggtgtg 5856



to top

>gb|AC097347.6| Homo sapiens X BAC RP11-1M18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160325

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 552   atcaattttcttttgggaatgctc 575
             |||||||||||||||||| |||||
Sbjct: 10875 atcaattttcttttgggattgctc 10898



to top

>dbj|AP003244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0419B01
          Length = 149610

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                          
Query: 600    gtggctgctgtagaagttattctatatccattctcccatcgtcggtggatcccttcactg 659
              ||||||||||| | |||||| | ||| ||| | ||||| ||| | ||||| |||||||| 
Sbjct: 123654 gtggctgctgttgcagttatgcgataaccactatcccagcgttgatggattccttcactc 123713

                                          
Query: 660    ggataaagaaaatccaattctactacct 687
              ||||| |  ||||| | |||||||||||
Sbjct: 123714 ggatataagaaatcaagttctactacct 123741



to top

>dbj|BS000118.1| Pan troglodytes chromosome 22 clone:PTB-141G07, map 22, complete
             sequences
          Length = 71456

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   tacagagtaacacagcagca 359
             ||||||||||||||||||||
Sbjct: 17527 tacagagtaacacagcagca 17546



to top

>gb|AY725818.1| Danio rerio fibronectin 1b (fn1b) mRNA, complete cds
          Length = 8522

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  ctgtaaagcagcagctggac 202
            ||||||||||||||||||||
Sbjct: 7754 ctgtaaagcagcagctggac 7735



to top

>dbj|AK119023.1| Arabidopsis thaliana At4g35970 mRNA for putative ascorbate
           peroxidase, complete cds, clone: RAFL21-34-M19
          Length = 973

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 525 gttctgagagtttcttgtgt 544
           ||||||||||||||||||||
Sbjct: 763 gttctgagagtttcttgtgt 744



to top

>gb|AY105752.1| Zea mays PCO066784 mRNA sequence
          Length = 2154

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 450  cgcccatagcatatagaggcaatgtaaagattcttggcccatttctccttcacatg 505
            ||||||||||||||    |||| ||| |||||||||||||| || ||||| |||||
Sbjct: 1799 cgcccatagcatatcccagcaaggtagagattcttggcccacttgtccttgacatg 1744



to top

>emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BAC clone F4B14 (ESSA project)
          Length = 99461

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 525   gttctgagagtttcttgtgt 544
             ||||||||||||||||||||
Sbjct: 93645 gttctgagagtttcttgtgt 93626



to top

>gb|AC147129.3| Mus musculus BAC clone RP24-531L5 from 1, complete sequence
          Length = 147476

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 94   acaaaatgaaggacatgataggag 117
            |||||||||||||||| |||||||
Sbjct: 2179 acaaaatgaaggacatcataggag 2156



to top

>gb|AC148978.3| Mus musculus BAC clone RP23-359K8 from 14, complete sequence
          Length = 241799

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    ctcttccatctgcttattgg 250
              ||||||||||||||||||||
Sbjct: 205826 ctcttccatctgcttattgg 205845


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,669,644
Number of Sequences: 3902068
Number of extensions: 6669644
Number of successful extensions: 120013
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 119582
Number of HSP's gapped (non-prelim): 418
length of query: 693
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 670
effective length of database: 17,143,297,704
effective search space: 11486009461680
effective search space used: 11486009461680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top