>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)|
            (Dynamin-like protein 6)
          Length = 914

 Score =  105 bits (262), Expect = 7e-23
 Identities = 63/109 (57%), Positives = 75/109 (68%), Gaps = 10/109 (9%)
 Frame = -1

Query: 517  REKYQKQSSLLSKLTRQLSIHDNR-AAASSYSNDSPEAESPR-TPGRPGEDWRSAFDSAA 344
            RE+YQKQSSLLSKLTRQLSIHDNR AAASSYS++S    SPR + G  G+DW +AF+SAA
Sbjct: 798  RERYQKQSSLLSKLTRQLSIHDNRAAAASSYSDNSGTESSPRASGGSSGDDWMNAFNSAA 857

Query: 343  NGPAPNIE---XXXXXXXXXXXSENGD---PNSSSRR--TPNRLPPAPP 221
            NGP+ ++               ++NGD   P S S R  TPNRLPPAPP
Sbjct: 858  NGPSDSLSKYGSGGHSRRYSDPAQNGDAASPGSGSNRRTTPNRLPPAPP 906

>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)|
            (Dynamin-like protein 3)
          Length = 920

 Score = 99.4 bits (246), Expect = 5e-21
 Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 9/109 (8%)
 Frame = -1

Query: 517  REKYQKQSSLLSKLTRQLSIHDNR-AAASSYSNDSPEAESPRT-PGRPGEDWRSAFDSAA 344
            R++YQKQSSLLSKLTRQLSIHDNR AAASS+S++S    SPRT  G  GEDW +AF++AA
Sbjct: 805  RDRYQKQSSLLSKLTRQLSIHDNRAAAASSWSDNSGTESSPRTNGGSSGEDWMNAFNAAA 864

Query: 343  NGP--APNIEXXXXXXXXXXXSENGDPNSSS-----RRTPNRLPPAPPR 218
            +GP                  ++NG+ +S S     R TPNRLPPAPP+
Sbjct: 865  SGPDSLKRYGSGGHSRRYSDPAQNGEDSSGSGGSSRRTTPNRLPPAPPQ 913

>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 960

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
 Frame = -1

Query: 514 EKYQKQSSLLSKLTRQ------LSIHDNRAAASSYSNDSPEAESPRTPGRPGEDWRSAFD 353
           EK +K +  L KL         LS+H  RA A++++ND  +AE  +   +P  D+ + FD
Sbjct: 115 EKKKKVAGQLEKLKEDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLN-FD 173

Query: 352 S 350
           S
Sbjct: 174 S 174

>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 952

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
 Frame = -1

Query: 517 REKYQKQSSLLSKLTRQ------LSIHDNRAAASSYSNDSPEAESPRTPGRPGEDWRSAF 356
           ++K +K  S L KL         LSIH  R   ++++ND+ EA+ P+   +   D+ + F
Sbjct: 113 KDKKKKGPSDLEKLKEDAKFQEFLSIHQKRTQVATWANDALEAKLPKAKTKASSDYLN-F 171

Query: 355 DSAAN 341
           DS +N
Sbjct: 172 DSDSN 176

>MRAY_BDEBA (Q6MIF7) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC|
           2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
          Length = 358

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 259 CWSWDPHFQSARDYRHFSTLIRCSGLGHLLQNRRLTSSPHLGGRVSEGSQLPDCHL 426
           CW W PHF      +HF   IR  G      +++   +P +GG +   S L  C L
Sbjct: 37  CWIWGPHFIKRLQLKHFGQAIRDDG---PQTHKKKAGTPTMGGGLILLSTLIPCLL 89

>PROB_SCHPO (O13810) Probable glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl|
           kinase) (GK)
          Length = 402

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 22/70 (31%), Positives = 36/70 (51%)
 Frame = -2

Query: 501 SNHLCCQSSHANLVSMTIELLLPLIQMTVRKLRALGHPAAQVRTGGQPSILQQMAQPRTS 322
           ++ +C + +H  L+S      L LI  TV KLR LGH    V +GG    L+++  P+  
Sbjct: 20  TSSICDEKTHEPLISN-----LSLIVETVVKLRKLGHNVVLVSSGGIAMGLRRLDLPKRP 74

Query: 321 NQGREVPIVA 292
           ++   V  +A
Sbjct: 75  SKLSAVQAIA 84

>AGLU_ASPNG (P56526) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 985

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
 Frame = +2

Query: 77  PLDQGARSIHPI--------SNPLHQSHHPIIRNRACA*QEYIIINHGY---*SARLVSR 223
           P+DQ     HP          +  + S+ P+  + A A Q+YI ++HG     S  L   
Sbjct: 229 PIDQNLYGQHPFYLDTRYYKGDRQNGSYIPVKSSEADASQDYISLSHGVFLRNSHGLEIL 288

Query: 224 WRWRQPIWRASAAGVGIPIFRAPATIGTSR 313
            R ++ IWR    G+ +  +  PA    +R
Sbjct: 289 LRSQKLIWRTLGGGIDLTFYSGPAPADVTR 318

>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)|
           (Trinucleotide repeat-containing gene 13 protein)
          Length = 1312

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 27/59 (45%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +3

Query: 225 GAGGNRFGVRRLLELGSPFSERPRLSALLDLDSMFGAGPFAAESKADL--QSSPGRPGV 395
           G G  R G RRLL LG P   RP +  LL L S  GA P A    + L  ++SP R GV
Sbjct: 83  GGGAFRPGSRRLLGLGGP--PRPFVVVLLPLASP-GAPPAAPTRASPLGARASPPRSGV 138

>GP149_CHICK (Q9DDD1) Probable G-protein coupled receptor 149 (G-protein coupled|
           receptor R35)
          Length = 723

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 29/78 (37%), Positives = 33/78 (42%)
 Frame = +3

Query: 222 GGAGGNRFGVRRLLELGSPFSERPRLSALLDLDSMFGAGPFAAESKADLQSSPGRPGVRG 401
           GG GG       L EL +  S RP  + L   DS   A P  A       + P   GVRG
Sbjct: 439 GGGGG-----AALAELSTTDSARPGPAGLSATDS---ARPGPAGFSTTDSARPSAAGVRG 490

Query: 402 LSASGLSFE*EEAAARLS 455
            +ASGL    E    RLS
Sbjct: 491 EAASGLGRTVEGPERRLS 508

>DHH1_ASHGO (Q75BS4) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)|
          Length = 484

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -2

Query: 438 LPLIQMTVRKLRALGHPAAQVRTGGQPSILQQMAQPRTSNQGREVP 301
           L  +Q   R  + + HP  Q + GG P  + Q  QP  ++Q  + P
Sbjct: 415 LDTMQGNARAAQQMPHPQQQAQLGGMPQPIPQQIQPPLAHQQAQPP 460

>SPON1_XENLA (P35447) Spondin-1 precursor (F-spondin)|
          Length = 803

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 295 DYRHFSTLIRCSGLGHLLQNRRLTSSPHLGGRV-SEGSQLPDCHLNK 432
           ++ ++S   +  G GH+++ R +T  P  GG V  E  Q   C L K
Sbjct: 669 EWSYWSECNKSCGKGHMIRTRMITMEPQFGGAVCPETVQRKKCRLRK 715

>RIHA_SHISS (Q3Z4E1) Pyrimidine-specific ribonucleoside hydrolase rihA (EC|
           3.2.-.-) (Cytidine/uridine-specific hydrolase)
          Length = 311

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = -2

Query: 429 IQMTVRKLRALGHPAAQVRTGGQPSI-LQQMAQPRTSNQGREVPIVAGALKMGIPTPAAD 253
           +++  + LR    P   V TG Q ++ L   + P   ++   + I+ GA+ +G  TPAA+
Sbjct: 105 VELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAE 164

>RIHA_SHIFL (Q83LY1) Pyrimidine-specific ribonucleoside hydrolase rihA (EC|
           3.2.-.-) (Cytidine/uridine-specific hydrolase)
          Length = 311

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = -2

Query: 429 IQMTVRKLRALGHPAAQVRTGGQPSI-LQQMAQPRTSNQGREVPIVAGALKMGIPTPAAD 253
           +++  + LR    P   V TG Q ++ L   + P   ++   + I+ GA+ +G  TPAA+
Sbjct: 105 VELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAE 164

>RIHA_SALTY (Q8ZQY4) Pyrimidine-specific ribonucleoside hydrolase rihA (EC|
           3.2.-.-) (Cytidine/uridine-specific hydrolase)
          Length = 311

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -2

Query: 429 IQMTVRKLRALGHPAAQVRTGGQPSI-LQQMAQPRTSNQGREVPIVAGALKMGIPTPAAD 253
           +++  + LR    P   V TG Q ++ L   + P    +   + I+ GA+ +G  TPAA+
Sbjct: 105 VELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAMALGNWTPAAE 164

>RIHA_SALTI (Q8Z8H0) Pyrimidine-specific ribonucleoside hydrolase rihA (EC|
           3.2.-.-) (Cytidine/uridine-specific hydrolase)
          Length = 311

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -2

Query: 429 IQMTVRKLRALGHPAAQVRTGGQPSI-LQQMAQPRTSNQGREVPIVAGALKMGIPTPAAD 253
           +++  + LR    P   V TG Q ++ L   + P    +   + I+ GA+ +G  TPAA+
Sbjct: 105 VELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAMALGNWTPAAE 164

>RIHA_ECOLI (P41409) Pyrimidine-specific ribonucleoside hydrolase rihA (EC|
           3.2.-.-) (Cytidine/uridine-specific hydrolase)
          Length = 311

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = -2

Query: 429 IQMTVRKLRALGHPAAQVRTGGQPSI-LQQMAQPRTSNQGREVPIVAGALKMGIPTPAAD 253
           +++  + LR    P   V TG Q ++ L   + P   ++   + I+ GA+ +G  TPAA+
Sbjct: 105 VELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAE 164

>RIHA_ECO57 (Q8XBL8) Pyrimidine-specific ribonucleoside hydrolase rihA (EC|
           3.2.-.-) (Cytidine/uridine-specific hydrolase)
          Length = 311

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = -2

Query: 429 IQMTVRKLRALGHPAAQVRTGGQPSI-LQQMAQPRTSNQGREVPIVAGALKMGIPTPAAD 253
           +++  + LR    P   V TG Q ++ L   + P   ++   + I+ GA+ +G  TPAA+
Sbjct: 105 VELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAE 164

>TENS1_HUMAN (Q9HBL0) Tensin-1|
          Length = 1735

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 445 AAASSYSNDSPEAESPRTPG 386
           A+   Y N SPEA SPR+PG
Sbjct: 898 ASDGQYENQSPEATSPRSPG 917

>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1|
           protein)
          Length = 410

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = +1

Query: 67  VDETSRPRRSLYSSNLKSAPPISPPNYQKQSVCLARIHNNKSWILISTTSISVALAATDL 246
           V+E S     L SS+ +   P  P N +        +H N+   L+    +S  ++  DL
Sbjct: 134 VEECSNAANLLSSSSSRGDIPCIPKNQEPTDAKALNVHENE---LLKDNKVSKQISKDDL 190

Query: 247 ACVGC 261
            C  C
Sbjct: 191 LCSAC 195

>RIHA_SALCH (Q57RR6) Pyrimidine-specific ribonucleoside hydrolase rihA (EC|
           3.2.-.-) (Cytidine/uridine-specific hydrolase)
          Length = 311

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -2

Query: 429 IQMTVRKLRALGHPAAQVRTGGQPSI-LQQMAQPRTSNQGREVPIVAGALKMGIPTPAAD 253
           +++  + LR    P   V TG Q ++ L   + P    +   + I+ GA+ +G  TPAA+
Sbjct: 105 VELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAMGLGNWTPAAE 164

>RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST)|
          Length = 523

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
 Frame = -1

Query: 376 EDWRSAFDSAANGPAPNIEXXXXXXXXXXXSENGDP---NSSSRRTPNRLPPAPP 221
           ++W +  D A   P P  E            E  D     S S   P  +PPAPP
Sbjct: 384 QEWEAEQDGAPAAPVPTEEARRGAPVPATALEEDDEVQITSVSTSVPRSVPPAPP 438

>CEZ2_MOUSE (Q8R554) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)|
           (Zinc finger protein Cezanne 2) (OTU domain-containing
           protein 7)
          Length = 926

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 24/94 (25%), Positives = 33/94 (35%), Gaps = 18/94 (19%)
 Frame = -1

Query: 445 AAASSYSNDSPEAESPRTPGRPGEDWRSAFDSAANG----------PAPNIEXXXXXXXX 296
           AAA++ +     A  P   G PG +  S   +AA            P+P           
Sbjct: 684 AAATATATVKRPARRPEAEGAPGPERASPGPTAAQPTQLVLKLKERPSPGTGASARAARA 743

Query: 295 XXXSENGDPNSSSRR--------TPNRLPPAPPR 218
              + +  P   +RR        TP R PPAP R
Sbjct: 744 AGGAASPGPGGGARRAAPGTGGPTPGRSPPAPAR 777

>SLBP_DROME (Q9VAN6) Histone RNA hairpin-binding protein (Histone|
           stem-loop-binding protein)
          Length = 276

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = -1

Query: 493 SLLSKLTRQLSIHDNRAAASSYSNDSPEAES----PRTPGRPGEDWRSAFD 353
           ++LS+  +Q+    N AA   Y    P+ E     PRTP + G+  R AFD
Sbjct: 193 AILSRRQKQIDYGKNTAAYERYVEMVPKDERTRDHPRTPNKYGKYSRRAFD 243

>ZN101_HUMAN (Q8IZC7) Zinc finger protein 101 (Zinc finger protein HZF12)|
          Length = 436

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +1

Query: 403 SQLPDCHLNKRKQ 441
           SQ+PDCHLNK+ Q
Sbjct: 84  SQIPDCHLNKKSQ 96

>FUTSC_DROME (Q9W596) Microtubule-associated protein futsch|
          Length = 5412

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = -1

Query: 517  REKYQKQSSLLSK--LTRQLSIHDNRAAASSYSNDSPEAESPRTPGRPG 377
            RE  + +S++ S+  ++R LS+  +  AA +  +D+  + SP+   RPG
Sbjct: 2498 RESLEDKSAVTSEKSVSRPLSVASDHEAAVAIEDDAKSSISPKDKSRPG 2546

>RIHA_ECOL6 (Q8FJY8) Pyrimidine-specific ribonucleoside hydrolase rihA (EC|
           3.2.-.-) (Cytidine/uridine-specific hydrolase)
          Length = 311

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = -2

Query: 429 IQMTVRKLRALGHPAAQVRTGGQPSI-LQQMAQPRTSNQGREVPIVAGALKMGIPTPAAD 253
           +++  + LR    P   V TG Q ++ L   + P   ++   + I+ GA+ +G  TPAA+
Sbjct: 105 VELMAKTLRESEEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAE 164

>RCOR2_RAT (Q5FWT8) REST corepressor 2|
          Length = 523

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
 Frame = -1

Query: 376 EDWRSAFDSAANGPAPNIEXXXXXXXXXXXSENGDP---NSSSRRTPNRLPPAPP 221
           ++W +  D A   P P  E            E  D     S S   P  +PPAPP
Sbjct: 384 QEWEAEQDGAPTAPVPVEEARRGAPVPATALEEDDEVQITSVSTSVPRSVPPAPP 438

>DDL_DEIRA (Q9RXF1) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 339

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +2

Query: 209 RLVSRWRWRQP--IWRASAAGVGIPIFRAPATIGTS 310
           RL  R  W+Q     RA AA +G P+F  PA +G+S
Sbjct: 140 RLAVRREWQQTPDAVRARAAELGYPLFVKPANLGSS 175


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,645,654
Number of Sequences: 219361
Number of extensions: 1708120
Number of successful extensions: 6114
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5994
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)