ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah60m13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UCRIA_WHEAT (Q7X9A6) Cytochrome b6-f complex iron-sulfur subunit... 72 4e-13
2UCRIA_ORYSA (Q69S39) Cytochrome b6-f complex iron-sulfur subunit... 69 3e-12
3UCRIA_TOBAC (P30361) Cytochrome b6-f complex iron-sulfur subunit... 67 1e-11
4UCRIA_SOLTU (Q69GY7) Cytochrome b6-f complex iron-sulfur subunit... 66 2e-11
5UCRIB_TOBAC (Q02585) Cytochrome b6-f complex iron-sulfur subunit... 66 2e-11
6UCRIA_SPIOL (P08980) Cytochrome b6-f complex iron-sulfur subunit... 64 1e-10
7UCRIA_FRIAG (O49078) Cytochrome b6-f complex iron-sulfur subunit... 59 3e-09
8UCRIA_ARATH (Q9ZR03) Cytochrome b6-f complex iron-sulfur subunit... 58 8e-09
9UCRIA_PEA (P26291) Cytochrome b6-f complex iron-sulfur subunit, ... 57 1e-08
10UCRI_MASLA (P83794) Cytochrome b6-f complex iron-sulfur subunit ... 52 6e-07
11UCRI_SYNP6 (Q5N5B0) Cytochrome b6-f complex iron-sulfur subunit ... 51 7e-07
12UCRIA_ANAVT (Q9L3P9) Cytochrome b6-f complex iron-sulfur subunit... 50 1e-06
13UCRIA_CHLS6 (Q7XYM4) Cytochrome b6-f complex iron-sulfur subunit... 50 2e-06
14UCRI_PROMP (Q7V2L4) Cytochrome b6-f complex iron-sulfur subunit ... 49 3e-06
15UCRI_NOSSP (P14698) Cytochrome b6-f complex iron-sulfur subunit ... 49 4e-06
16UCRI_PROMA (Q7VDC0) Cytochrome b6-f complex iron-sulfur subunit ... 49 5e-06
17UCRIA_ANASP (Q93SX0) Cytochrome b6-f complex iron-sulfur subunit... 47 1e-05
18UCRI_SYNP2 (P26292) Cytochrome b6-f complex iron-sulfur subunit ... 46 2e-05
19UCRIB_CYAPA (Q5CC92) Cytochrome b6-f complex iron-sulfur subunit... 46 2e-05
20UCRIA_CYAPA (Q5CC93) Cytochrome b6-f complex iron-sulfur subunit... 46 3e-05
21UCRI_SYNEL (Q9X9T2) Cytochrome b6-f complex iron-sulfur subunit ... 46 3e-05
22UCRIA_VOLCA (Q9SBN3) Cytochrome b6-f complex iron-sulfur subunit... 45 7e-05
23UCRIB_SYNY3 (P26290) Cytochrome b6-f complex iron-sulfur subunit... 45 7e-05
24UCRIA_CHLRE (P49728) Cytochrome b6-f complex iron-sulfur subunit... 43 2e-04
25UCRI_SYNPX (Q7U566) Cytochrome b6-f complex iron-sulfur subunit ... 40 0.002
26UCRI_PROMM (Q7V654) Cytochrome b6-f complex iron-sulfur subunit ... 40 0.002
27UCRIB_ANAVT (Q93SW6) Cytochrome b6-f complex iron-sulfur subunit... 38 0.006
28UCRIB_ANASP (Q93SW8) Cytochrome b6-f complex iron-sulfur subunit... 38 0.006
29UCRIC_ANASP (P70758) Cytochrome b6-f complex iron-sulfur subunit... 38 0.008
30UCRIA_SYNY3 (P74714) Cytochrome b6-f complex iron-sulfur subunit... 36 0.024
31UCRI_GLOVI (Q7NCE1) Cytochrome b6-f complex iron-sulfur subunit ... 33 0.16
32TRIB1_HUMAN (Q96RU8) Tribbles homolog 1 (TRB-1) (SKIP1) (G-prote... 30 1.3
33VE2_HPV25 (P36787) Regulatory protein E2 29 3.9
34DHE2_YEAST (P33327) NAD-specific glutamate dehydrogenase (EC 1.4... 28 6.6
35TRIB1_MOUSE (Q8K4K4) Tribbles homolog 1 (TRB-1) 28 6.6

>UCRIA_WHEAT (Q7X9A6) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 222

 Score = 72.0 bits (175), Expect = 4e-13
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWWK 109
           LALVHADVDDGKVVFVPWV TDFRTG+NPWWK
Sbjct: 191 LALVHADVDDGKVVFVPWVETDFRTGDNPWWK 222



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>UCRIA_ORYSA (Q69S39) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 225

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LALVHADVDDGKV+FVPWV TDFRTG+NPWW
Sbjct: 194 LALVHADVDDGKVLFVPWVETDFRTGDNPWW 224



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>UCRIA_TOBAC (P30361) Cytochrome b6-f complex iron-sulfur subunit 1, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 1)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 1) (ISP 1) (RISP 1)
          Length = 228

 Score = 67.4 bits (163), Expect = 1e-11
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LAL HAD+DDGKVVFVPWV TDFRTGE+PWW
Sbjct: 197 LALAHADIDDGKVVFVPWVETDFRTGEDPWW 227



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>UCRIA_SOLTU (Q69GY7) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 230

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LAL HAD+DDGKVVFVPWV TDFRTG++PWW
Sbjct: 199 LALAHADIDDGKVVFVPWVETDFRTGDSPWW 229



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>UCRIB_TOBAC (Q02585) Cytochrome b6-f complex iron-sulfur subunit 2, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 2)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 2) (ISP 2) (RISP 2)
          Length = 228

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LAL HAD+DDGKVVFVPWV TDFRTGE PWW
Sbjct: 197 LALAHADIDDGKVVFVPWVETDFRTGEAPWW 227



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>UCRIA_SPIOL (P08980) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 230

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 26/31 (83%), Positives = 26/31 (83%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LAL H DVDDGKVVFVPW  TDFRTGE PWW
Sbjct: 198 LALAHCDVDDGKVVFVPWTETDFRTGEAPWW 228



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>UCRIA_FRIAG (O49078) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 230

 Score = 59.3 bits (142), Expect = 3e-09
 Identities = 25/32 (78%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
 Frame = -2

Query: 204 LALVHADV-DDGKVVFVPWVXTDFRTGENPWW 112
           LAL H D+ ++GKVVFVPWV TDFRTGENPWW
Sbjct: 198 LALSHCDISEEGKVVFVPWVETDFRTGENPWW 229



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>UCRIA_ARATH (Q9ZR03) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP) (Proton gradient
           regulation protein 1)
          Length = 229

 Score = 57.8 bits (138), Expect = 8e-09
 Identities = 24/32 (75%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
 Frame = -2

Query: 204 LALVHADVDD-GKVVFVPWVXTDFRTGENPWW 112
           LAL HAD+D+ GKV+FVPWV TDFRTG+ PWW
Sbjct: 197 LALAHADIDEAGKVLFVPWVETDFRTGDAPWW 228



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>UCRIA_PEA (P26291) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 230

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 25/33 (75%), Positives = 27/33 (81%), Gaps = 2/33 (6%)
 Frame = -2

Query: 204 LALVHADV--DDGKVVFVPWVXTDFRTGENPWW 112
           LAL H DV  +DGKVVFVPWV TDFRTG+ PWW
Sbjct: 197 LALAHCDVGVEDGKVVFVPWVETDFRTGDAPWW 229



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>UCRI_MASLA (P83794) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 179

 Score = 51.6 bits (122), Expect = 6e-07
 Identities = 20/31 (64%), Positives = 21/31 (67%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LAL HA V D  +V  PW  TDFRTGE PWW
Sbjct: 148 LALCHATVQDDNIVLTPWTETDFRTGEKPWW 178



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>UCRI_SYNP6 (Q5N5B0) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 179

 Score = 51.2 bits (121), Expect = 7e-07
 Identities = 20/31 (64%), Positives = 21/31 (67%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LAL H  V D KV   PW  TDFRTG+NPWW
Sbjct: 148 LALAHVSVTDDKVFLSPWTETDFRTGDNPWW 178



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>UCRIA_ANAVT (Q9L3P9) Cytochrome b6-f complex iron-sulfur subunit 1 (EC|
           1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 179

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 19/31 (61%), Positives = 22/31 (70%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LAL HA  ++ K+V  PW  TDFRTGE PWW
Sbjct: 148 LALSHAKTENDKIVLTPWTETDFRTGEEPWW 178



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>UCRIA_CHLS6 (Q7XYM4) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 252

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           L L H + D+GK++  PW  TDFRTGE PWW
Sbjct: 221 LQLAHVEDDNGKILLSPWTETDFRTGEKPWW 251



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>UCRI_PROMP (Q7V2L4) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 178

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 20/31 (64%), Positives = 21/31 (67%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LAL H DVDD  V+   W  TDFRT ENPWW
Sbjct: 147 LALAHVDVDDDAVLVKQWSETDFRTNENPWW 177



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>UCRI_NOSSP (P14698) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 179

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LAL HA+  D K++  PW  TDFRTG+ PWW
Sbjct: 148 LALAHANTVDDKIILSPWTETDFRTGDAPWW 178



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>UCRI_PROMA (Q7VDC0) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 178

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LAL H D+DD  V+   W  TDFRTG+ PWW
Sbjct: 147 LALTHIDIDDDNVLVSQWTETDFRTGDKPWW 177



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>UCRIA_ANASP (Q93SX0) Cytochrome b6-f complex iron-sulfur subunit 1 (EC|
           1.10.99.1) (Rieske iron-sulfur protein 1)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 1) (ISP 1) (RISP 1)
          Length = 179

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LAL HA  ++ K+V   W  TDFRTGE PWW
Sbjct: 148 LALSHAKTENDKIVLTSWTETDFRTGEEPWW 178



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>UCRI_SYNP2 (P26292) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 180

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 20/32 (62%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = -2

Query: 204 LALVHADV-DDGKVVFVPWVXTDFRTGENPWW 112
           LALVHA+V +D K+ F  W  TDFRT E PWW
Sbjct: 148 LALVHAEVTEDDKISFTDWTETDFRTDEAPWW 179



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>UCRIB_CYAPA (Q5CC92) Cytochrome b6-f complex iron-sulfur subunit 2, cyanelle|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 2)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 2) (ISP 2) (RISP 2)
          Length = 241

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -2

Query: 204 LALVHADV-DDGKVVFVPWVXTDFRTGENPWWK 109
           LAL H +V +DG V F PW  TDFRT   PWWK
Sbjct: 209 LALAHVNVLEDGVVAFEPWTETDFRTNTAPWWK 241



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>UCRIA_CYAPA (Q5CC93) Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 1)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 1) (ISP 1) (RISP 1)
          Length = 239

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 20/33 (60%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 204 LALVHADV-DDGKVVFVPWVXTDFRTGENPWWK 109
           LAL H  V +DG V F PW  TDFRT   PWWK
Sbjct: 207 LALAHVSVLEDGVVAFEPWTETDFRTNTAPWWK 239



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>UCRI_SYNEL (Q9X9T2) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 180

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 20/32 (62%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = -2

Query: 204 LALVHADV-DDGKVVFVPWVXTDFRTGENPWW 112
           LALV A V +D K+VF PW   DFRTG+ PWW
Sbjct: 148 LALVKATVTEDDKLVFTPWTEIDFRTGKEPWW 179



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>UCRIA_VOLCA (Q9SBN3) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 206

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 20/32 (62%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -2

Query: 204 LALVHADV-DDGKVVFVPWVXTDFRTGENPWW 112
           LAL H DV +DG V F  W  TDFRTG  PWW
Sbjct: 174 LALAHCDVQEDGLVTFSTWSETDFRTGLEPWW 205



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>UCRIB_SYNY3 (P26290) Cytochrome b6-f complex iron-sulfur subunit 2 (EC|
           1.10.99.1) (Rieske iron-sulfur protein 2)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 2) (ISP 2) (RISP 2)
          Length = 180

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 20/32 (62%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -2

Query: 204 LALVHADV-DDGKVVFVPWVXTDFRTGENPWW 112
           LAL HA V DD K+V   W  TDFRT E+PWW
Sbjct: 148 LALAHATVTDDDKLVLSTWTETDFRTDEDPWW 179



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>UCRIA_CHLRE (P49728) Cytochrome b6-f complex iron-sulfur subunit, chloroplast|
           precursor (EC 1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 206

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 19/32 (59%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -2

Query: 204 LALVHADV-DDGKVVFVPWVXTDFRTGENPWW 112
           LAL H DV + G V F  W  TDFRTG  PWW
Sbjct: 174 LALAHCDVAESGLVTFSTWTETDFRTGLEPWW 205



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>UCRI_SYNPX (Q7U566) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 178

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LAL +  V++  V    W  TDFRTG+ PWW
Sbjct: 147 LALANVSVENDNVFVSQWTETDFRTGDKPWW 177



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>UCRI_PROMM (Q7V654) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 178

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           LAL +  V++  V    W  TDFRTGE PWW
Sbjct: 147 LALANIAVENDNVFVSQWTETDFRTGEKPWW 177



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>UCRIB_ANAVT (Q93SW6) Cytochrome b6-f complex iron-sulfur subunit 2 (EC|
           1.10.99.1) (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 178

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           L LVH  V D  +    W  TD RTGE PWW
Sbjct: 147 LKLVHVQVKDDYIWISSWQETDPRTGEKPWW 177



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>UCRIB_ANASP (Q93SW8) Cytochrome b6-f complex iron-sulfur subunit 2 (EC|
           1.10.99.1) (Rieske iron-sulfur protein 2)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 2) (ISP 2) (RISP 2)
          Length = 178

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           L LV   V D  +   PW  TD RTGE PWW
Sbjct: 147 LKLVQVQVKDDYIWISPWQETDPRTGEKPWW 177



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>UCRIC_ANASP (P70758) Cytochrome b6-f complex iron-sulfur subunit 3 (EC|
           1.10.99.1) (Rieske iron-sulfur protein 3)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 3) (ISP 3) (RISP 3)
          Length = 178

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           L +V   V D  ++  PW  TD RTG+ PWW
Sbjct: 147 LKIVQVAVIDNSILISPWTETDPRTGKKPWW 177



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>UCRIA_SYNY3 (P74714) Cytochrome b6-f complex iron-sulfur subunit 1 (EC|
           1.10.99.1) (Rieske iron-sulfur protein 1)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 1) (ISP 1) (RISP 1)
          Length = 178

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFRTGENPWW 112
           L +V   V D ++   PW   D RTGE PWW
Sbjct: 147 LKIVQVAVVDDQIFISPWTDLDPRTGEKPWW 177



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>UCRI_GLOVI (Q7NCE1) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 186

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
 Frame = -2

Query: 204 LALVHADVDDGKVVFVPWVXTDFR-----TGENPWW 112
           LALV A V D KV+  PW   DFR       ++P+W
Sbjct: 149 LALVKATVSDDKVLIAPWTEQDFRCTDLWCNKDPYW 184



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>TRIB1_HUMAN (Q96RU8) Tribbles homolog 1 (TRB-1) (SKIP1) (G-protein-coupled|
           receptor induced protein 2) (GIG-2)
          Length = 372

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +1

Query: 91  RSLCRLFPPRVLAGPEVGLHPWHEDXL 171
           RSL R  P   L  PE+ LHPW E  L
Sbjct: 316 RSLLRREPSERLTAPEILLHPWFESVL 342



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>VE2_HPV25 (P36787) Regulatory protein E2|
          Length = 502

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -3

Query: 200 PSFTQTSTTARXSSCHGXRPTSGPARTRGGNKRHKLRQ 87
           PS T ++T+ R         +S   R RGG +RH+L +
Sbjct: 333 PSTTSSATSQRSQRSRSRAGSSRGGRGRGGRRRHRLSE 370



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>DHE2_YEAST (P33327) NAD-specific glutamate dehydrogenase (EC 1.4.1.2)|
           (NAD-GDH)
          Length = 1092

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 180 DDGKVVFVPWVXTDFRTGENPWWK 109
           D+G   FV W     R    PWWK
Sbjct: 680 DEGTAGFVDWATNHARVRNCPWWK 703



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>TRIB1_MOUSE (Q8K4K4) Tribbles homolog 1 (TRB-1)|
          Length = 372

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 91  RSLCRLFPPRVLAGPEVGLHPWHE 162
           RSL R  P   L  P++ LHPW E
Sbjct: 316 RSLLRREPSERLTAPQILLHPWFE 339


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,037,084
Number of Sequences: 219361
Number of extensions: 335008
Number of successful extensions: 998
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 80,573,946
effective HSP length: 43
effective length of database: 71,141,423
effective search space used: 1707394152
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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