ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah60g06 |
|---|---|
| Clone Library Name | barley_pub |
>EF1G2_ORYSA (Q6YW46) Elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma| 2) Length = 418 Score = 308 bits (788), Expect = 1e-83 Identities = 139/159 (87%), Positives = 154/159 (96%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 NPLDLLPPSKM+LD+WKRLYSNTK+NF +VA+KGFW+MYDPEGYSLWFCDYKY +ENTVS Sbjct: 260 NPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVS 319 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMEL 324 +VT+NKVGGFLQRMDLCRKYAFGKMLVIGSE PFKVKGLWLFRG +IP+FVM+EVYDMEL Sbjct: 320 FVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMEL 379 Query: 323 YEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 207 YEWTKVD+SDEAQK+RV AMIEDLEPFEG+SLLDAKCFK Sbjct: 380 YEWTKVDISDEAQKERVSAMIEDLEPFEGESLLDAKCFK 418
>EF1G1_ORYSA (Q9ZRI7) Elongation factor 1-gamma 1 (EF-1-gamma 1) (eEF-1B gamma| 1) Length = 418 Score = 306 bits (785), Expect = 3e-83 Identities = 138/159 (86%), Positives = 154/159 (96%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 NPLDLLPPSKM+LD+WKRLYSNTK+NF +VA+KGFW+MYDPEGYSLWFCDYKY +ENTVS Sbjct: 260 NPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVS 319 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMEL 324 +VT+NKVGGFLQRMDLCRKYAFGKMLVIGSE PFKVKGLWLFRG +IP+FVM+EVYDMEL Sbjct: 320 FVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMEL 379 Query: 323 YEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 207 YEWTKVD+SDEAQK+RV AMIEDLEPFEG++LLDAKCFK Sbjct: 380 YEWTKVDISDEAQKERVSAMIEDLEPFEGEALLDAKCFK 418
>EF1G3_ORYSA (Q5Z627) Elongation factor 1-gamma 3 (EF-1-gamma 3) (eEF-1B gamma| 3) Length = 416 Score = 306 bits (783), Expect = 5e-83 Identities = 138/159 (86%), Positives = 152/159 (95%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 NPLDLLPPSKM+LD+WKRLYSNTK+NF ++A+KGFW+MYDPEGYSLWFCDYKY +ENTVS Sbjct: 258 NPLDLLPPSKMILDEWKRLYSNTKTNFREIAIKGFWDMYDPEGYSLWFCDYKYNDENTVS 317 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMEL 324 +VT+NKVGGFLQRMDLCRKYAFGKMLVIGS PFKVKGLWLFRGQDIP+FVM+EVYDMEL Sbjct: 318 FVTMNKVGGFLQRMDLCRKYAFGKMLVIGSTPPFKVKGLWLFRGQDIPKFVMDEVYDMEL 377 Query: 323 YEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 207 YEWTKVDLSDEAQK+RV AMIED EPFEG+ LLDAKCFK Sbjct: 378 YEWTKVDLSDEAQKERVNAMIEDQEPFEGEDLLDAKCFK 416
>EF1G2_ARATH (Q9FVT2) Probable elongation factor 1-gamma 2 (EF-1-gamma 2)| (eEF-1B gamma 2) Length = 413 Score = 295 bits (755), Expect = 9e-80 Identities = 133/159 (83%), Positives = 148/159 (93%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 NPLDLLPPS MVLDDWKRLYSNTKSNF +VA+KGFW+MYDPEGYSLWFCDYKY +EN VS Sbjct: 255 NPLDLLPPSPMVLDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENMVS 314 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMEL 324 +VTLNKVGGFLQRMDL RKY+FGKML+ GSE PFKVKGLWLFRG +IP+F+M+EVYDMEL Sbjct: 315 FVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMEL 374 Query: 323 YEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 207 YEWTKVD+SDEAQK+RV MIED EPFEG++LLDAKCFK Sbjct: 375 YEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 413
>EF1G1_ARATH (O04487) Probable elongation factor 1-gamma 1 (EF-1-gamma 1)| (eEF-1B gamma 1) Length = 414 Score = 295 bits (755), Expect = 9e-80 Identities = 133/159 (83%), Positives = 148/159 (93%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 NPLDLLPPS MVLDDWKRLYSNTKSNF +VA+KGFW+MYDPEGYSLWFCDYKY +EN VS Sbjct: 256 NPLDLLPPSPMVLDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENMVS 315 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMEL 324 +VTLNKVGGFLQRMDL RKY+FGKML+ GSE PFKVKGLWLFRG +IP+F+M+EVYDMEL Sbjct: 316 FVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMEL 375 Query: 323 YEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 207 YEWTKVD+SDEAQK+RV MIED EPFEG++LLDAKCFK Sbjct: 376 YEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 414
>EF1G_PRUAV (Q9FUM1) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 422 Score = 292 bits (748), Expect = 6e-79 Identities = 134/159 (84%), Positives = 146/159 (91%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 NPLDLLPPS MVLDDWKRLYSNTK+NF +VA+KGFW+MYDPEGYSLWFC+YKY +ENTVS Sbjct: 264 NPLDLLPPSNMVLDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCEYKYNDENTVS 323 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMEL 324 +VTLNKVGGFLQRMDL RKYAFGKMLVIGSE PFKVKGLWLFRGQ+IP FVM E YDMEL Sbjct: 324 FVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPPFVMEECYDMEL 383 Query: 323 YEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 207 Y WTKVDLSDE QK+RV +IED EPFEG++LLDAKCFK Sbjct: 384 YNWTKVDLSDENQKERVNQVIEDQEPFEGEALLDAKCFK 422
>EF1G_TRYCR (P34715) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 411 Score = 122 bits (307), Expect = 8e-28 Identities = 65/159 (40%), Positives = 98/159 (61%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 NPLD LPPS VLD +KR YSNT + VA F++ YD GY+ ++C YKY E+N + Sbjct: 257 NPLDELPPSPFVLDAFKREYSNTDTR--TVAAPYFFQHYDAAGYTTFWCRYKYNEDNKMQ 314 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVYDMEL 324 ++T N + G+ QRM+ RKYAFG L+IG E + LW+FRG+ +P ++ +V D EL Sbjct: 315 FMTANLIRGWFQRMEHVRKYAFGVALIIGEERRHDIVALWVFRGRGMPA-IVEDVEDTEL 373 Query: 323 YEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 207 ++W +V AQ++R+ + P + +L+ + FK Sbjct: 374 FDWEEV-ADVAAQRERITDYLSWEGPTIPRPVLEGRVFK 411
>EF1G2_YEAST (P36008) Elongation factor 1-gamma 2 (EF-1-gamma 2) (Translation| elongation factor 1B gamma 2) (Eukaryotic elongation factor 1Bgamma 2) (eEF1Bgamma 2) Length = 412 Score = 107 bits (268), Expect = 3e-23 Identities = 65/164 (39%), Positives = 91/164 (55%), Gaps = 5/164 (3%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +PL+ L S VLDDWKR YSN + VA+ FWE Y+PE YS+W YKY +E T++ Sbjct: 253 HPLEALGKSTFVLDDWKRKYSNDDTR--PVALPWFWEHYNPEEYSIWKVGYKYNDELTLT 310 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDI-PEFVMNEVYDME 327 +++ N VGGF R+ KY FG ++V G + G + RGQD P F + D E Sbjct: 311 FMSNNLVGGFFNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQDFAPAF--DVAPDWE 368 Query: 326 LYEWTKVDLSDEAQKKRVEAMIEDLEPF----EGQSLLDAKCFK 207 YE+TK+D + E K+ V M +P E + ++D K K Sbjct: 369 SYEYTKLDPTKEEDKEFVNNMWAWDKPVVVNGEDKEIVDGKVLK 412
>EF1G_CARAU (Q90YC0) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 442 Score = 107 bits (268), Expect = 3e-23 Identities = 58/163 (35%), Positives = 95/163 (58%), Gaps = 4/163 (2%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +P LP S V+D++KR YSN + VA+ FW+ +D EG+S+W+ +Y++ EE T+S Sbjct: 283 DPYAHLPKSSFVMDEFKRKYSNEDTL--TVALPYFWDHFDREGFSIWYAEYRFPEELTMS 340 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DM 330 +++ N + G QR+D RK AF +++ G+ + G+W+FRGQ++ F ++E + D Sbjct: 341 FMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQEL-AFTLSEDWQIDY 399 Query: 329 ELYEWTKVDLSDEAQKKRVEAMIEDLEPFE--GQSLLDAKCFK 207 E Y W K+D+ E K V+ F+ G+S K FK Sbjct: 400 ESYTWRKLDVDSEECKTMVKEYFAWEGEFKHVGKSFNQGKIFK 442
>EF1G1_YEAST (P29547) Elongation factor 1-gamma 1 (EF-1-gamma 1) (Translation| elongation factor 1B gamma 1) (Eukaryotic elongation factor 1Bgamma 1) (eEF1Bgamma 1) (Calcium and membrane-binding protein 1) (Calcium phospholipid-binding protein) (CPBP) Length = 415 Score = 107 bits (266), Expect = 4e-23 Identities = 63/164 (38%), Positives = 93/164 (56%), Gaps = 5/164 (3%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +PL+LL S VLDDWKR YSN + VA+ FWE Y+PE YSLW YKY +E T++ Sbjct: 256 HPLELLGKSTFVLDDWKRKYSNEDTR--PVALPWFWEHYNPEEYSLWKVTYKYNDELTLT 313 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD-IPEFVMNEVYDME 327 +++ N VGGF R+ KY FG ++V G + G + RGQD +P F + D E Sbjct: 314 FMSNNLVGGFFNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQDYVPAF--DVAPDWE 371 Query: 326 LYEWTKVDLSDEAQKKRVEAMIEDLEPF----EGQSLLDAKCFK 207 Y++ K+D +++ K+ + M +P E + ++D K K Sbjct: 372 SYDYAKLDPTNDDDKEFINNMWAWDKPVSVNGEPKEIVDGKVLK 415
>EF1G_BRARE (Q6PE25) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 442 Score = 106 bits (264), Expect = 8e-23 Identities = 53/152 (34%), Positives = 93/152 (61%), Gaps = 2/152 (1%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +P LP S V+D++KR YSN + VA+ FW+ +D EG+S+W+ +Y++ EE T++ Sbjct: 283 DPFAHLPKSSFVMDEFKRKYSNEDTM--TVALPYFWDHFDREGFSIWYAEYRFPEELTMA 340 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DM 330 +++ N + G QR+D RK AF +++ G+ + G+W+FRGQD+ F +++ + D Sbjct: 341 FMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQDL-AFPLSDDWQIDY 399 Query: 329 ELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQ 234 E Y W K+D+ E K M+++ +EG+ Sbjct: 400 ESYTWRKLDVDSEECK----TMVKEYFAWEGE 427
>EF1G_CAEEL (P54412) Probable elongation factor 1-gamma (EF-1-gamma) (eEF-1B| gamma) Length = 398 Score = 105 bits (262), Expect = 1e-22 Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 1/160 (0%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +P +P VLD++KR YSN + A+ FWE +D + +S+W C+YKY E+ T++ Sbjct: 241 DPFQDMPKGTFVLDNFKRSYSNEDTATK--AIPHFWENFDADNWSIWKCEYKYPEDLTLA 298 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIP-EFVMNEVYDME 327 +++ N + G QR++ +K AF M++ G++ + G+W+++G + E + D E Sbjct: 299 FMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYE 358 Query: 326 LYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 207 Y WTK+D +A KK V + F G+ K FK Sbjct: 359 SYTWTKLDAKSDATKKEVNEYLMWEGDFGGKKFNQGKIFK 398
>EF1GA_XENLA (P26642) Elongation factor 1-gamma-A (EF-1-gamma-A) (eEF-1B| gamma-A) (p47) Length = 436 Score = 105 bits (261), Expect = 2e-22 Identities = 52/140 (37%), Positives = 84/140 (60%), Gaps = 2/140 (1%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +P LP S ++D++KR YSN + VA+ FWE +D EG+S+W+ +YK+ EE T + Sbjct: 277 DPYAHLPKSSFIMDEFKRKYSNEDTL--TVALPYFWEHFDKEGWSIWYAEYKFPEELTQA 334 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DM 330 +++ N + G QR+D RK F +++ G+ + G+W+FRGQD+ F ++E + D Sbjct: 335 FMSCNLITGMFQRLDKLRKTGFASVILFGTNNNSSISGVWVFRGQDL-AFTLSEDWQIDY 393 Query: 329 ELYEWTKVDLSDEAQKKRVE 270 E Y W K+D E K V+ Sbjct: 394 ESYNWRKLDSGSEECKTLVK 413
>EF1G_RAT (Q68FR6) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 436 Score = 103 bits (257), Expect = 5e-22 Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 4/163 (2%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +P LP S VLD++KR YSN + VA+ FWE +D +G+SLW+ +Y++ EE T + Sbjct: 277 DPFAHLPKSTFVLDEFKRKYSNEDTL--SVALPYFWEHFDKDGWSLWYAEYRFPEELTQT 334 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DM 330 +++ N + G QR+D RK AF +++ G+ + G+W+FRGQD+ F ++ + D Sbjct: 335 FMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQDL-AFPLSPDWQVDY 393 Query: 329 ELYEWTKVDLSDEAQKKRVEAMIEDLEPFE--GQSLLDAKCFK 207 E Y W K+D E + V F+ G+++ K FK Sbjct: 394 ESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAVNQGKIFK 436
>EF1G_RABIT (P29694) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 436 Score = 103 bits (256), Expect = 6e-22 Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 4/163 (2%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +P LP S VLD++KR YSN + VA+ FWE +D +G+SLW+ +Y++ EE T + Sbjct: 277 DPFAHLPKSTFVLDEFKRKYSNEDTL--SVALPYFWEHFDKDGWSLWYAEYRFPEELTQT 334 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DM 330 +++ N + G QR+D RK AF +++ G+ + G+W+FRGQ++ F ++ + D Sbjct: 335 FMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGIWVFRGQEL-AFPLSPDWQVDY 393 Query: 329 ELYEWTKVDLSDEAQKKRVEAMIEDLEPFE--GQSLLDAKCFK 207 E Y W K+D S E + V F+ G++ K FK Sbjct: 394 ESYTWRKLDPSSEETQTLVREYFAWEGAFQHVGKAFNQGKVFK 436
>EF1GB_XENLA (Q91375) Elongation factor 1-gamma-B (EF-1-gamma-B) (eEF-1B| gamma-B) (p47) Length = 437 Score = 102 bits (254), Expect = 1e-21 Identities = 53/160 (33%), Positives = 92/160 (57%), Gaps = 2/160 (1%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +P LP S ++D++KR YSN + VA+ FWE ++ EG+S+W+ +YK+ EE T + Sbjct: 278 DPYAHLPKSSFIMDEFKRKYSNEDTL--TVALPYFWEHFEKEGWSIWYAEYKFPEELTQT 335 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DM 330 +++ N + G QR+D RK AF +++ G+ + G+W+FRG D+ F ++E + D Sbjct: 336 FMSCNLITGMFQRLDKLRKTAFASVILFGTNNNSTISGVWVFRGHDL-AFTLSEDWQIDY 394 Query: 329 ELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCF 210 E Y W K+ E+ + M+++ +EG+ K F Sbjct: 395 ESYTWRKL----ESDSEECRTMVKEYFAWEGEFKHVGKAF 430
>EF1G_MOUSE (Q9D8N0) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 436 Score = 102 bits (253), Expect = 1e-21 Identities = 56/163 (34%), Positives = 92/163 (56%), Gaps = 4/163 (2%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +P LP S VLD++KR YSN + VA+ FWE +D +G+SLW+ +Y++ EE T + Sbjct: 277 DPFAHLPKSTFVLDEFKRKYSNEDTL--SVALPYFWEHFDKDGWSLWYAEYRFPEELTQT 334 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DM 330 +++ N + G QR+D RK AF +++ G+ + G+W+FRGQ++ F ++ + D Sbjct: 335 FMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQEL-AFPLSPDWQVDY 393 Query: 329 ELYEWTKVDLSDEAQKKRVEAMIEDLEPFE--GQSLLDAKCFK 207 E Y W K+D E + V F+ G+++ K FK Sbjct: 394 ESYTWRKLDPGSEETQTLVREYFSWEGTFQHVGKAVNQGKIFK 436
>EF1G_ARTSA (P12261) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 429 Score = 101 bits (251), Expect = 2e-21 Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 1/138 (0%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +P D +P +DD+KR YSN N ++ FWE +D E YS+W+ +YKYQ+E Sbjct: 272 DPFDEMPKGTFNMDDFKRFYSN---NEETKSIPYFWEKFDKENYSIWYSEYKYQDELAKV 328 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIP-EFVMNEVYDME 327 Y++ N + G QR++ RK AF + V G + + G+W++RGQD+ + + D E Sbjct: 329 YMSCNLITGMFQRIEKMRKQAFASVCVFGEDNDSSISGIWVWRGQDLAFKLSPDWQIDYE 388 Query: 326 LYEWTKVDLSDEAQKKRV 273 Y+W K+D + K V Sbjct: 389 SYDWKKLDPDAQETKDLV 406
>EF1G_HUMAN (P26641) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 436 Score = 101 bits (251), Expect = 2e-21 Identities = 56/163 (34%), Positives = 91/163 (55%), Gaps = 4/163 (2%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +P LP S VLD++KR YSN + VA+ FWE +D +G+SLW+ +Y++ EE T + Sbjct: 277 DPFAHLPKSTFVLDEFKRKYSNEDTL--SVALPYFWEHFDKDGWSLWYSEYRFPEELTQT 334 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DM 330 +++ N + G QR+D RK AF +++ G+ + G+W+FRGQ++ F ++ + D Sbjct: 335 FMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQEL-AFPLSPDWQVDY 393 Query: 329 ELYEWTKVDLSDEAQKKRVEAMIEDLEPFE--GQSLLDAKCFK 207 E Y W K+D E + V F+ G++ K FK Sbjct: 394 ESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 436
>EF1G_DROME (Q9NJH0) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 431 Score = 100 bits (250), Expect = 3e-21 Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 2/139 (1%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +P D LP DD+KR+YSN ++ F++ +D E YS+WF +YKY EE + Sbjct: 274 DPFDALPKGTFNFDDFKRVYSNEDEA---KSIPYFFDKFDAENYSIWFGEYKYNEELSKV 330 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DM 330 +++ N + G QR+D RK AF + + G + + G+W++RGQD+ F ++ + D Sbjct: 331 FMSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDL-AFTLSPDWQIDY 389 Query: 329 ELYEWTKVDLSDEAQKKRV 273 E+Y+W K+D E KK V Sbjct: 390 EVYDWKKLDAKSEETKKLV 408
>EF1G_PIG (Q29387) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| (Fragment) Length = 432 Score = 100 bits (250), Expect = 3e-21 Identities = 56/163 (34%), Positives = 90/163 (55%), Gaps = 4/163 (2%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEENTVS 504 +P LP S VLD++KR YSN + VA+ FWE +D +G+SLW+ +Y++ EE T + Sbjct: 273 DPFAHLPKSTFVLDEFKRKYSNEDTL--SVALPYFWEHFDKDGWSLWYSEYRFPEELTQT 330 Query: 503 YVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQDIPEFVMNEVY--DM 330 +++ N + G QR+D RK AF +++ G+ + G+W+FRGQ++ F ++ + D Sbjct: 331 FMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQEL-AFPLSPDWQVDY 389 Query: 329 ELYEWTKVDLSDEAQKKRVEAMI--EDLEPFEGQSLLDAKCFK 207 E Y W K+D E + V E G++ K FK Sbjct: 390 ESYTWRKLDPGSEETQTLVREYFSWEGAYQHVGKAFNQGKIFK 432
>EF1G_SCHPO (P40921) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Length = 409 Score = 92.0 bits (227), Expect = 1e-18 Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 2/161 (1%) Frame = -3 Query: 683 NPLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSLWFCDYKYQEE-NTV 507 +PL P ++++KR+YSN + A+ F+E +DPE YS+W DY Y E+ Sbjct: 253 HPLASAPNGSFDIEEYKRVYSNQDTR--SGALPWFFEHFDPENYSVWKVDYSYPEDLKQP 310 Query: 506 SYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRGQD-IPEFVMNEVYDM 330 ++T N +GGF QR++ RKY FG +VIG + G ++ +G D +P F + D Sbjct: 311 VFMTNNLIGGFFQRLEASRKYIFGCCVVIGENGDNTITGAFVIKGHDYVPAF--DVAPDW 368 Query: 329 ELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQSLLDAKCFK 207 Y +TK+D++ K +E +P EG+ + D K K Sbjct: 369 GSYTFTKLDINKPEDKAFIEDAWAWDKPIEGREVADGKVCK 409
>Y115_ADE02 (P03290) Hypothetical protein E-115| Length = 115 Score = 31.2 bits (69), Expect = 3.1 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 3/79 (3%) Frame = +2 Query: 188 PGSAPLT*STWRPARTAPRTAQGPRSWPQHASSGPHRRG---QPWSTHRAPCHRPRS*QT 358 P S PL T A PR + PR+ P RRG PWS P R ++ + Sbjct: 41 PSSTPLKVCTAPRAAPPPRASCAPRATP--------RRGWTMTPWSNATWPTRRAKT-GS 91 Query: 359 QGCPAHGRATVP*P*RAPQ 415 PA ++ P P R+P+ Sbjct: 92 ASAPAGPASSAPWPARSPE 110
>RPOA2_PYRHO (O93777) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)| Length = 397 Score = 31.2 bits (69), Expect = 3.1 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 8/55 (14%) Frame = -3 Query: 398 VKGLWLFRGQDIPEFVMNEVYDM-----ELYEWTKVDLS---DEAQKKRVEAMIE 258 +K L +G+D+PE V E+Y+ E Y+ TKV++ DE K+ +A+IE Sbjct: 7 IKSLIEKKGKDLPESVKQELYEKLIKYNEKYKLTKVEVETIIDEVIKEYEKALIE 61
>SSB_SHEHA (P77953) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 226 Score = 30.8 bits (68), Expect = 4.0 Identities = 21/73 (28%), Positives = 31/73 (42%) Frame = +2 Query: 224 PARTAPRTAQGPRSWPQHASSGPHRRGQPWSTHRAPCHRPRS*QTQGCPAHGRATVP*P* 403 P + AP+ P+ PQ A P +P S + P + Q+QG A P P Sbjct: 135 PQQQAPQQGYAPK--PQSAPQQPAYAPKPQSAPQQPAQQQGGYQSQGQQPQAPAYAPKPQ 192 Query: 404 RAPQNQSRASCQK 442 APQ + + Q+ Sbjct: 193 AAPQQRPAPAPQQ 205
>SI1L1_HUMAN (O43166) Signal-induced proliferation-associated 1-like protein 1| (High-risk human papilloma viruses E6 oncoproteins targeted protein 1) (E6-targeted protein 1) Length = 1803 Score = 30.4 bits (67), Expect = 5.2 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = +3 Query: 102 QANSSKKRPTVSTLNFKS*IGSLPPPSRSQAVLRSLEALGVQQGLPLER 248 Q S + P S LN G +PPP R+ + RS+ + G PLER Sbjct: 1080 QVPSQVQSPMTSRLNAGKGDGKMPPPERAANIPRSISS----DGRPLER 1124
>SI1L1_MOUSE (Q8C0T5) Signal-induced proliferation-associated 1-like protein 1| Length = 1782 Score = 30.4 bits (67), Expect = 5.2 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = +3 Query: 102 QANSSKKRPTVSTLNFKS*IGSLPPPSRSQAVLRSLEALGVQQGLPLER 248 Q S + P S LN G +PPP R+ + RS+ + G PLER Sbjct: 1080 QVPSQLQSPMTSRLNAGKGDGKMPPPERAANIPRSISS----DGRPLER 1124
>LEM3_YEAST (P42838) Alkylphosphocholine resistance protein LEM3 (Ro-sensitive| 3) Length = 414 Score = 30.0 bits (66), Expect = 6.9 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -3 Query: 635 KRLYSNTKSNFHDVAVKGFWEMYDPEGYS 549 K+ Y TK N+ +A +WE P+GY+ Sbjct: 270 KKRYKKTKYNYTQIAPPPYWEKMYPDGYN 298
>PRMA_CLOAB (P45558) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 311 Score = 30.0 bits (66), Expect = 6.9 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -3 Query: 644 DDWKRLYSNTKSNFHDVAVKGFWEMYDPEGYSL 546 ++WK+ Y TK + VK WE Y P+ Y L Sbjct: 114 NNWKKYYKPTKIGAR-IVVKPLWEEYTPKDYEL 145
>APTX_DROME (Q8MSG8) Protein aprataxin-like| Length = 662 Score = 30.0 bits (66), Expect = 6.9 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +2 Query: 224 PARTAPRTAQGPRSWPQHASSGPHRRGQPWSTHRAPCHRPRS 349 P R P + + P H SGP PW+ R PCH+ ++ Sbjct: 500 PFRNTPHLNRQSQK-PPHPRSGPRGPMAPWTGPRFPCHQQQN 540
>UVRB_LEGPL (Q5X0E6) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 663 Score = 29.6 bits (65), Expect = 9.0 Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 7/156 (4%) Frame = -3 Query: 680 PLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVK---GFWEMYDPEGY---SLWFCDYKYQE 519 P ++ P+K + +LY K+ F D AV+ +++ Y PE Y S F + Sbjct: 59 PTLIMAPNKTLA---AQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPASDTFIEKDASI 115 Query: 518 ENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRG-QDIPEFVMNE 342 + + L+ ++R D + +G + L L RG Q ++ Sbjct: 116 NEHIEQMRLSATKALIERKDAIIVATVSAIYGLGDPDSYLRMLLHLSRGEQSDQRKILKR 175 Query: 341 VYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQ 234 + +M ++T+ +LS E + RV + D+ P + + Sbjct: 176 LAEM---QYTRTNLSLERGQFRVNGDVIDIFPADSE 208
>UVRB_LEGPH (Q5ZZD9) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 663 Score = 29.6 bits (65), Expect = 9.0 Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 7/156 (4%) Frame = -3 Query: 680 PLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVK---GFWEMYDPEGY---SLWFCDYKYQE 519 P ++ P+K + +LY K+ F D AV+ +++ Y PE Y S F + Sbjct: 59 PTLIMAPNKTLA---AQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPASDTFIEKDASI 115 Query: 518 ENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRG-QDIPEFVMNE 342 + + L+ ++R D + +G + L L RG Q ++ Sbjct: 116 NEHIEQMRLSATKALIERKDAIIVATVSAIYGLGDPDSYLRMLLHLSRGEQSDQRKILKR 175 Query: 341 VYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQ 234 + +M ++T+ +LS E + RV + D+ P + + Sbjct: 176 LAEM---QYTRTNLSLERGQFRVHGDVIDIFPADSE 208
>UVRB_LEGPA (Q5X906) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 663 Score = 29.6 bits (65), Expect = 9.0 Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 7/156 (4%) Frame = -3 Query: 680 PLDLLPPSKMVLDDWKRLYSNTKSNFHDVAVK---GFWEMYDPEGY---SLWFCDYKYQE 519 P ++ P+K + +LY K+ F D AV+ +++ Y PE Y S F + Sbjct: 59 PTLIMAPNKTLA---AQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPASDTFIEKDASI 115 Query: 518 ENTVSYVTLNKVGGFLQRMDLCRKYAFGKMLVIGSEAPFKVKGLWLFRG-QDIPEFVMNE 342 + + L+ ++R D + +G + L L RG Q ++ Sbjct: 116 NEHIEQMRLSATKALIERKDAIIVATVSAIYGLGDPDSYLRMLLHLSRGEQSDQRKILKR 175 Query: 341 VYDMELYEWTKVDLSDEAQKKRVEAMIEDLEPFEGQ 234 + +M ++T+ +LS E + RV + D+ P + + Sbjct: 176 LAEM---QYTRTNLSLERGQFRVHGDVIDIFPADSE 208
>P320_TRYBB (P21787) Microtubule-associated protein P320 (Fragment)| Length = 290 Score = 29.6 bits (65), Expect = 9.0 Identities = 14/54 (25%), Positives = 24/54 (44%) Frame = +3 Query: 324 ELHVIDLVHDKLRDVLPTEEPQSLDLEGRLRTNHEHLAKSIFAAQIHPLQEPAD 485 E H + H+ + + P+E Q + + TN H+ +S F H +P D Sbjct: 136 ESHFLTTTHEAYKPIDPSEYRQKRTVGEEVTTNMRHVDESHFLTTTHEAYKPID 189
>YOT5_CAEEL (P34651) Hypothetical protein ZK632.5| Length = 824 Score = 29.6 bits (65), Expect = 9.0 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +3 Query: 333 VIDLVHDKLRDVLPTEEPQSLDLEGRLRTNHEHLAKSIFA 452 V+ ++H L +VL T ++L E RLR H+ +IFA Sbjct: 640 VLRMLHTALNEVLETRNSETLTREPRLRYAFFHMNTTIFA 679 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,108,728 Number of Sequences: 219361 Number of extensions: 2121450 Number of successful extensions: 6210 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5923 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6182 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
