ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah60g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103741.1| Oryza sativa (japonica cultivar-group) cDNA clon... 464 e-127
2gb|AC136229.3| Oryza sativa (japonica cultivar-group) chromosome... 226 8e-56
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 226 8e-56
4ref|NM_111575.2| Arabidopsis thaliana pseudouridylate synthase/ ... 76 2e-10
5gb|AC016827.7|ATAC016827 Arabidopsis thaliana chromosome III BAC... 54 7e-04
6gb|AC111104.10| Mus musculus chromosome 3, clone RP23-187F18, co... 46 0.16
7gb|AC118047.7| Mus musculus chromosome 3, clone RP24-219P20, com... 46 0.16
8gb|AC126606.16| Mus musculus chromosome 1, clone RP24-68C1, comp... 42 2.6
9gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 42 2.6
10gb|AC140985.3| Mus musculus BAC clone RP23-60H23 from chromosome... 42 2.6
11gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosom... 42 2.6
12gb|BC054123.1| Mus musculus kinesin family member 14, mRNA (cDNA... 42 2.6
13ref|XM_989909.1| PREDICTED: Mus musculus kinesin family member 1... 42 2.6
14ref|XM_619672.3| PREDICTED: Mus musculus kinesin family member 1... 42 2.6
15emb|CT010475.5| Mouse DNA sequence from clone RP23-386L14 on chr... 42 2.6
16emb|BX664726.5| Human DNA sequence from clone RP11-95H8 on chrom... 42 2.6
17emb|BX005040.12| Human DNA sequence from clone RP11-101E5 on chr... 42 2.6
18emb|BX005214.7| Human DNA sequence from clone RP11-347J14 on chr... 42 2.6
19emb|AL596385.12| Human DNA sequence from clone RP11-95K23 on chr... 42 2.6
20emb|AL590491.13| Human DNA sequence from clone RP11-144A16 on ch... 42 2.6
21emb|AL353770.18| Human DNA sequence from clone RP11-395E19 on ch... 42 2.6
22gb|AC159191.2| Mus musculus BAC clone RP24-158G12 from chromosom... 42 2.6
23gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosom... 42 2.6
24gb|AC005900.1|AC005900 Homo sapiens chromosome 17, clone hRPK.99... 42 2.6
25emb|CT030240.7| Mouse DNA sequence from clone RP23-26N21 on chro... 42 2.6
26emb|CT030185.11| Mouse DNA sequence from clone RP23-204L16 on ch... 42 2.6
27emb|BX005192.7| Human DNA sequence from clone RP11-211N15 on chr... 42 2.6 
>dbj|AK103741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138L06, full
            insert sequence
          Length = 1210

 Score =  464 bits (234), Expect = e-127
 Identities = 474/554 (85%)
 Strand = Plus / Minus

                                                                        
Query: 169  aaaaatcaataaaagagaagtttgcatctactaatctgatgagtccttccaaagctcacc 228
            |||||||||||||| || ||||| ||| | |||||||||||||||||||||||||| |  
Sbjct: 1135 aaaaatcaataaaataggagtttacatttgctaatctgatgagtccttccaaagctaatg 1076

                                                                        
Query: 229  ggaggggaacccacaggaggcttcaagatttctttgtcatagttaactgacatgagatat 288
             |||||| |||| |||||||||  |  ||||| ||||||||||| ||||||||||| || 
Sbjct: 1075 tgaggggcaccctcaggaggctgtagcatttccttgtcatagttgactgacatgaggtac 1016

                                                                        
Query: 289  aatccatgtggtggtgctgacaaggccaccttcgcaagttctttccggtcctttgccgca 348
            |||||||| ||||||||||| || |||||||| || ||||| || |||||  |||| || 
Sbjct: 1015 aatccatgaggtggtgctgataatgccacctttgctagttccttgcggtctcttgctgcg 956

                                                                        
Query: 349  atgatttttgggacgatttcaggaggcagtccctcccttccaacttgaattagcaaagct 408
            |||||||||| |||||| ||||| || ||| |||||||||||||||| |  | |||||||
Sbjct: 955  atgatttttgcgacgatgtcaggtggtagtgcctcccttccaacttgtagcaacaaagct 896

                                                                        
Query: 409  accatgttcctcacttgtctgtacaaaaagccggtgccttcaacctcaagttgtatgata 468
            ||||||||||| ||||||||||||| |||||| |||||||||| |||||| |||| ||||
Sbjct: 895  accatgttcctaacttgtctgtacagaaagccagtgccttcaatctcaagctgtaagata 836

                                                                        
Query: 469  gcatccattttagtaacatcaaggcgtgatatcttctttatcggactgcggacacgatca 528
            ||| |||||| | ||||||||| |||   |||||||||||| |||||||| |||||||||
Sbjct: 835  gcacccatttcaataacatcaaagcgcattatcttctttatgggactgcgtacacgatca 776

                                                                        
Query: 529  ttatgtactgcattggcgaaagatgtgaagtcatgtactccaacaaaatgatttgcagcc 588
            || ||||||||||| ||||||||||| |||||||||  |||||||||||| |||||||||
Sbjct: 775  ttgtgtactgcattagcgaaagatgtaaagtcatgtgttccaacaaaatgctttgcagcc 716

                                                                        
Query: 589  tcctgcatagcatgtggattaagtttatgtgcactatggtaagcatagttagtatggaag 648
            ||| ||||||| |||| |||||| ||||  ||||||||||| ||||| | | |||| |||
Sbjct: 715  tcccgcatagcttgtgaattaagcttatacgcactatggtatgcataatgattatgaaag 656

                                                                        
Query: 649  gggtccataactgcttcattatagatcttgtaatgatatattttgctctttgtggatgtc 708
            || ||||| |||| | ||||||| |||||||||||||| ||||||||| |||||||||||
Sbjct: 655  ggatccatgactggtccattataaatcttgtaatgataaattttgctccttgtggatgtc 596

                          
Query: 709  cgagcatggaattc 722
            || ||||| |||||
Sbjct: 595  cgggcatgaaattc 582
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>gb|AC136229.3| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0690B12,
              complete sequence
          Length = 135323

 Score =  226 bits (114), Expect = 8e-56
 Identities = 216/250 (86%)
 Strand = Plus / Plus

                                                                          
Query: 473    ccattttagtaacatcaaggcgtgatatcttctttatcggactgcggacacgatcattat 532
              |||||| | ||||||||| |||   |||||||||||| |||||||| ||||||||||| |
Sbjct: 123797 ccatttcaataacatcaaagcgcattatcttctttatgggactgcgtacacgatcattgt 123856

                                                                          
Query: 533    gtactgcattggcgaaagatgtgaagtcatgtactccaacaaaatgatttgcagcctcct 592
              |||||||||| ||||||||||| |||||||||  |||||||||||| |||||||||||| 
Sbjct: 123857 gtactgcattagcgaaagatgtaaagtcatgtgttccaacaaaatgctttgcagcctccc 123916

                                                                          
Query: 593    gcatagcatgtggattaagtttatgtgcactatggtaagcatagttagtatggaaggggt 652
              ||||||| |||| |||||| ||||  ||||||||||| ||||| | | |||| ||||| |
Sbjct: 123917 gcatagcttgtgaattaagcttatacgcactatggtatgcataatgattatgaaagggat 123976

                                                                          
Query: 653    ccataactgcttcattatagatcttgtaatgatatattttgctctttgtggatgtccgag 712
              |||| |||| | ||||||| |||||||||||||| ||||||||| ||||||||||||| |
Sbjct: 123977 ccatgactggtccattataaatcttgtaatgataaattttgctccttgtggatgtccggg 124036

                        
Query: 713    catggaattc 722
              |||| |||||
Sbjct: 124037 catgaaattc 124046



 Score =  172 bits (87), Expect = 1e-39
 Identities = 192/227 (84%)
 Strand = Plus / Plus

                                                                          
Query: 169    aaaaatcaataaaagagaagtttgcatctactaatctgatgagtccttccaaagctcacc 228
              |||||||||||||| || ||||| ||| | |||||||||||||||||||||||||| |  
Sbjct: 117060 aaaaatcaataaaataggagtttacatttgctaatctgatgagtccttccaaagctaatg 117119

                                                                          
Query: 229    ggaggggaacccacaggaggcttcaagatttctttgtcatagttaactgacatgagatat 288
               |||||| |||| |||||||||  |  ||||| ||||||||||| ||||||||||| || 
Sbjct: 117120 tgaggggcaccctcaggaggctgtagcatttccttgtcatagttgactgacatgaggtac 117179

                                                                          
Query: 289    aatccatgtggtggtgctgacaaggccaccttcgcaagttctttccggtcctttgccgca 348
              |||||||| ||||||||||| || |||||||| || ||||| || |||||  |||| || 
Sbjct: 117180 aatccatgaggtggtgctgataatgccacctttgctagttccttgcggtctcttgctgcg 117239

                                                             
Query: 349    atgatttttgggacgatttcaggaggcagtccctcccttccaacttg 395
              |||||||||| |||||| ||||| || ||| ||||||||||||||||
Sbjct: 117240 atgatttttgcgacgatgtcaggtggtagtgcctcccttccaacttg 117286



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                          
Query: 408    taccatgttcctcacttgtctgtacaaaaagccggtgccttcaacctcaagttgtatgat 467
              |||||||||||| ||||||||||||| |||||| |||||||||| |||||| |||| |||
Sbjct: 123301 taccatgttcctaacttgtctgtacagaaagccagtgccttcaatctcaagctgtaagat 123360

                  
Query: 468    agca 471
              ||||
Sbjct: 123361 agca 123364
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  226 bits (114), Expect = 8e-56
 Identities = 216/250 (86%)
 Strand = Plus / Plus

                                                                            
Query: 473      ccattttagtaacatcaaggcgtgatatcttctttatcggactgcggacacgatcattat 532
                |||||| | ||||||||| |||   |||||||||||| |||||||| ||||||||||| |
Sbjct: 11554303 ccatttcaataacatcaaagcgcattatcttctttatgggactgcgtacacgatcattgt 11554362

                                                                            
Query: 533      gtactgcattggcgaaagatgtgaagtcatgtactccaacaaaatgatttgcagcctcct 592
                |||||||||| ||||||||||| |||||||||  |||||||||||| |||||||||||| 
Sbjct: 11554363 gtactgcattagcgaaagatgtaaagtcatgtgttccaacaaaatgctttgcagcctccc 11554422

                                                                            
Query: 593      gcatagcatgtggattaagtttatgtgcactatggtaagcatagttagtatggaaggggt 652
                ||||||| |||| |||||| ||||  ||||||||||| ||||| | | |||| ||||| |
Sbjct: 11554423 gcatagcttgtgaattaagcttatacgcactatggtatgcataatgattatgaaagggat 11554482

                                                                            
Query: 653      ccataactgcttcattatagatcttgtaatgatatattttgctctttgtggatgtccgag 712
                |||| |||| | ||||||| |||||||||||||| ||||||||| ||||||||||||| |
Sbjct: 11554483 ccatgactggtccattataaatcttgtaatgataaattttgctccttgtggatgtccggg 11554542

                          
Query: 713      catggaattc 722
                |||| |||||
Sbjct: 11554543 catgaaattc 11554552



 Score =  172 bits (87), Expect = 1e-39
 Identities = 192/227 (84%)
 Strand = Plus / Plus

                                                                            
Query: 169      aaaaatcaataaaagagaagtttgcatctactaatctgatgagtccttccaaagctcacc 228
                |||||||||||||| || ||||| ||| | |||||||||||||||||||||||||| |  
Sbjct: 11547566 aaaaatcaataaaataggagtttacatttgctaatctgatgagtccttccaaagctaatg 11547625

                                                                            
Query: 229      ggaggggaacccacaggaggcttcaagatttctttgtcatagttaactgacatgagatat 288
                 |||||| |||| |||||||||  |  ||||| ||||||||||| ||||||||||| || 
Sbjct: 11547626 tgaggggcaccctcaggaggctgtagcatttccttgtcatagttgactgacatgaggtac 11547685

                                                                            
Query: 289      aatccatgtggtggtgctgacaaggccaccttcgcaagttctttccggtcctttgccgca 348
                |||||||| ||||||||||| || |||||||| || ||||| || |||||  |||| || 
Sbjct: 11547686 aatccatgaggtggtgctgataatgccacctttgctagttccttgcggtctcttgctgcg 11547745

                                                               
Query: 349      atgatttttgggacgatttcaggaggcagtccctcccttccaacttg 395
                |||||||||| |||||| ||||| || ||| ||||||||||||||||
Sbjct: 11547746 atgatttttgcgacgatgtcaggtggtagtgcctcccttccaacttg 11547792



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                            
Query: 408      taccatgttcctcacttgtctgtacaaaaagccggtgccttcaacctcaagttgtatgat 467
                |||||||||||| ||||||||||||| |||||| |||||||||| |||||| |||| |||
Sbjct: 11553807 taccatgttcctaacttgtctgtacagaaagccagtgccttcaatctcaagctgtaagat 11553866

                    
Query: 468      agca 471
                ||||
Sbjct: 11553867 agca 11553870
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>ref|NM_111575.2| Arabidopsis thaliana pseudouridylate synthase/ tRNA-pseudouridine
           synthase AT3G06950 mRNA, complete cds
          Length = 1060

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 394 tgaattagcaaagctaccatgttcctcacttgtctgtacaaaaagccggtgccttcaacc 453
           ||||| ||||||||||||||||| || |||||||||||||||||||| |  |||||||| 
Sbjct: 819 tgaatcagcaaagctaccatgtttctgacttgtctgtacaaaaagccagaaccttcaact 760

                     
Query: 454 tcaagttgta 463
           ||||| ||||
Sbjct: 759 tcaagctgta 750
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>gb|AC016827.7|ATAC016827 Arabidopsis thaliana chromosome III BAC F17A9 genomic sequence,
             complete sequence
          Length = 90142

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 409   accatgttcctcacttgtctgtacaaaaagccggtgccttcaacctcaagttgta 463
             |||||||| || |||||||||||||||||||| |  |||||||| ||||| ||||
Sbjct: 33031 accatgtttctgacttgtctgtacaaaaagccagaaccttcaacttcaagctgta 32977
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>gb|AC111104.10| Mus musculus chromosome 3, clone RP23-187F18, complete sequence
          Length = 222158

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 122   caaagaaactgcaaaatacaaca 144
             |||||||||||||||||||||||
Sbjct: 21984 caaagaaactgcaaaatacaaca 21962
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>gb|AC118047.7| Mus musculus chromosome 3, clone RP24-219P20, complete sequence
          Length = 159930

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 122    caaagaaactgcaaaatacaaca 144
              |||||||||||||||||||||||
Sbjct: 129937 caaagaaactgcaaaatacaaca 129915
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>gb|AC126606.16| Mus musculus chromosome 1, clone RP24-68C1, complete sequence
          Length = 192150

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 595    atagcatgtggattaagtttatgtg 619
              ||||||| |||||||||||||||||
Sbjct: 140207 atagcatatggattaagtttatgtg 140183
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>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 470    catccattttagtaacatcaa 490
              |||||||||||||||||||||
Sbjct: 468789 catccattttagtaacatcaa 468769
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>gb|AC140985.3| Mus musculus BAC clone RP23-60H23 from chromosome 13, complete sequence
          Length = 222741

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 656    taactgcttcattatagatct 676
              |||||||||||||||||||||
Sbjct: 143888 taactgcttcattatagatct 143868
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>gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosome 10, complete
             sequence
          Length = 180642

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 127   aaactgcaaaatacaacatac 147
             |||||||||||||||||||||
Sbjct: 18966 aaactgcaaaatacaacatac 18946
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>gb|BC054123.1| Mus musculus kinesin family member 14, mRNA (cDNA clone
            IMAGE:6509974), partial cds
          Length = 4486

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 595  atagcatgtggattaagtttatgtg 619
            ||||||| |||||||||||||||||
Sbjct: 3009 atagcatatggattaagtttatgtg 3033
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>ref|XM_989909.1| PREDICTED: Mus musculus kinesin family member 14 (Kif14), mRNA
          Length = 8952

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 595  atagcatgtggattaagtttatgtg 619
            ||||||| |||||||||||||||||
Sbjct: 5642 atagcatatggattaagtttatgtg 5666
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>ref|XM_619672.3| PREDICTED: Mus musculus kinesin family member 14 (Kif14), mRNA
          Length = 8770

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 595  atagcatgtggattaagtttatgtg 619
            ||||||| |||||||||||||||||
Sbjct: 5461 atagcatatggattaagtttatgtg 5485
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>emb|CT010475.5| Mouse DNA sequence from clone RP23-386L14 on chromosome 13, complete
             sequence
          Length = 202971

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 122   caaagaaactgcaaaatacaa 142
             |||||||||||||||||||||
Sbjct: 77350 caaagaaactgcaaaatacaa 77330
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>emb|BX664726.5| Human DNA sequence from clone RP11-95H8 on chromosome 9 Contains a
             pseudogene similar to part of  6-pyruvoyltetrahydropterin
             synthase (PTS), a novel gene similar to c9orf36, two novel
             genes and a novel pseudogene, complete sequence
          Length = 144571

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   agaacaaagaaactgcaaaat 138
             |||||||||||||||||||||
Sbjct: 96741 agaacaaagaaactgcaaaat 96721
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>emb|BX005040.12| Human DNA sequence from clone RP11-101E5 on chromosome 9 Contains two
             novel genes, a novel protein similar to chromosome 9 open
             reading frame 36 (C9orf36), a 6-pyruvoyltetrahydropterin
             synthase (PTS) pseudogene, the 5' end of a pseudogene
             similar to part of contactin associated protein-like
             family, a novel pseudogene and a CpG island, complete
             sequence
          Length = 171762

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   agaacaaagaaactgcaaaat 138
             |||||||||||||||||||||
Sbjct: 48533 agaacaaagaaactgcaaaat 48513
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>emb|BX005214.7| Human DNA sequence from clone RP11-347J14 on chromosome 9 Contains the
             C9orf36 gene for chromosome 9 open reading frame 36, two
             novel pseudogenes, a 6-pyruvoyltetrahydropterin synthase
             (PTS) pseudogene and two novel genes, complete sequence
          Length = 143520

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   agaacaaagaaactgcaaaat 138
             |||||||||||||||||||||
Sbjct: 46596 agaacaaagaaactgcaaaat 46616
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>emb|AL596385.12| Human DNA sequence from clone RP11-95K23 on chromosome 9 Contains the
              gene for a novel protein similar to FLJ45202, the gene for
              a novel protein similar to chromosome 9 open reading frame
              36 (C9orf36), a pseudogene similar to part of contactin
              associated protein-like 4 (CNTNAP4), a novel pseudogene,
              three novel genes and a CpG island, complete sequence
          Length = 172579

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 118    agaacaaagaaactgcaaaat 138
              |||||||||||||||||||||
Sbjct: 140752 agaacaaagaaactgcaaaat 140732
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>emb|AL590491.13| Human DNA sequence from clone RP11-144A16 on chromosome 9 Contains a
             pseudogene similar to part of contactin associated protein
             family, a novel pseudogene, the gene for a novel protein
             similar to chromosome 9 open reading frame 36 (C9orf36),
             two novel genes, a 6-pyruvoyltetrahydropterin synthase
             (PTS) pseudogene and a CpG island, complete sequence
          Length = 174366

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   agaacaaagaaactgcaaaat 138
             |||||||||||||||||||||
Sbjct: 77974 agaacaaagaaactgcaaaat 77994
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>emb|AL353770.18| Human DNA sequence from clone RP11-395E19 on chromosome 9 Contains a
             novel pseudogene, the gene for a novel protein similar to
             chromosome 9 open reading frame 36 (C9orf36), a
             6-pyruvoyltetrahydropterin synthase (PTS-P1) pseudogene
             and three novel genes, complete sequence
          Length = 130898

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   agaacaaagaaactgcaaaat 138
             |||||||||||||||||||||
Sbjct: 90876 agaacaaagaaactgcaaaat 90856
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>gb|AC159191.2| Mus musculus BAC clone RP24-158G12 from chromosome 13, complete sequence
          Length = 176738

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 122    caaagaaactgcaaaatacaa 142
              |||||||||||||||||||||
Sbjct: 117923 caaagaaactgcaaaatacaa 117943
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>gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosome 10, complete
             sequence
          Length = 217425

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 127   aaactgcaaaatacaacatac 147
             |||||||||||||||||||||
Sbjct: 87514 aaactgcaaaatacaacatac 87494
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>gb|AC005900.1|AC005900 Homo sapiens chromosome 17, clone hRPK.998_F_8, complete sequence
          Length = 175066

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    gaacaaagaaactgcaaaata 139
              |||||||||||||||||||||
Sbjct: 140178 gaacaaagaaactgcaaaata 140158
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>emb|CT030240.7| Mouse DNA sequence from clone RP23-26N21 on chromosome 13, complete
              sequence
          Length = 175209

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 366    ttcaggaggcagtccctccct 386
              |||||||||||||||||||||
Sbjct: 175045 ttcaggaggcagtccctccct 175065
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>emb|CT030185.11| Mouse DNA sequence from clone RP23-204L16 on chromosome 13, complete
            sequence
          Length = 116416

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 366  ttcaggaggcagtccctccct 386
            |||||||||||||||||||||
Sbjct: 1836 ttcaggaggcagtccctccct 1856
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>emb|BX005192.7| Human DNA sequence from clone RP11-211N15 on chromosome 9, complete
             sequence
          Length = 163795

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   agaacaaagaaactgcaaaat 138
             |||||||||||||||||||||
Sbjct: 67487 agaacaaagaaactgcaaaat 67507


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,280,275
Number of Sequences: 3902068
Number of extensions: 7280275
Number of successful extensions: 141450
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141324
Number of HSP's gapped (non-prelim): 126
length of query: 741
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 718
effective length of database: 17,143,297,704
effective search space: 12308887751472
effective search space used: 12308887751472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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