>PAT5_SOLTU (P15478) Patatin T5 precursor (Potato tuber protein)|
          Length = 386

 Score =  113 bits (282), Expect = 5e-25
 Identities = 58/135 (42%), Positives = 81/135 (60%)
 Frame = -2

Query: 476 DGAEARLADYFDVLAGTSTRGPVTTLLTIPNKKRRPVFAAKDIQAFYMDHAPRIFPQLRG 297
           +  +ARLADYFDV+ GTST G +T ++T PN+  RP  AAKDI  FY +H P+IF     
Sbjct: 60  NNTDARLADYFDVIGGTSTGGLLTAMITTPNETNRPFAAAKDIVPFYFEHGPKIFQSSGS 119

Query: 296 AFGRIMRILRSFSGPCYDGKYLHEVVRKKLGSGRLHQTLTNVVIPTFDIRRLQSIMFLSY 117
            F           GP YDGKYL +V+++KLG  R+HQ LT V I +FDI+  + ++F   
Sbjct: 120 IF-----------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKS 168

Query: 116 EVSHFPPLSNLLGDL 72
            ++  P L   + D+
Sbjct: 169 NLAKSPELDAKMYDI 183

>PAT3_SOLTU (P11768) Patatin class 1 precursor (Patatin class I) (Potato tuber|
           protein)
          Length = 386

 Score =  111 bits (278), Expect = 1e-24
 Identities = 58/132 (43%), Positives = 79/132 (59%)
 Frame = -2

Query: 467 EARLADYFDVLAGTSTRGPVTTLLTIPNKKRRPVFAAKDIQAFYMDHAPRIFPQLRGAFG 288
           +ARLADYFDV+ GTST G +T ++T PN+  RP  AAKDI  FY +H P IF        
Sbjct: 63  DARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF-------- 114

Query: 287 RIMRILRSFSGPCYDGKYLHEVVRKKLGSGRLHQTLTNVVIPTFDIRRLQSIMFLSYEVS 108
                  S  GP YDGKYL +V+++KLG  R+HQ LT V I +FDI+  + ++F    ++
Sbjct: 115 ---NYSGSIIGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLA 171

Query: 107 HFPPLSNLLGDL 72
             P L   + D+
Sbjct: 172 KSPELDAKMYDI 183

>PAT2_SOLTU (P15477) Patatin B2 precursor (Potato tuber protein)|
          Length = 386

 Score =  111 bits (278), Expect = 1e-24
 Identities = 58/132 (43%), Positives = 79/132 (59%)
 Frame = -2

Query: 467 EARLADYFDVLAGTSTRGPVTTLLTIPNKKRRPVFAAKDIQAFYMDHAPRIFPQLRGAFG 288
           +ARLADYFDV+ GTST G +T ++T PN+  RP  AAKDI  FY +H P IF        
Sbjct: 63  DARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF-------- 114

Query: 287 RIMRILRSFSGPCYDGKYLHEVVRKKLGSGRLHQTLTNVVIPTFDIRRLQSIMFLSYEVS 108
                  S  GP YDGKYL +V+++KLG  R+HQ LT V I +FDI+  + ++F    ++
Sbjct: 115 ---NYSGSILGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLA 171

Query: 107 HFPPLSNLLGDL 72
             P L   + D+
Sbjct: 172 KSPELDAKMYDI 183

>PAT0_SOLTU (P07745) Patatin precursor (Potato tuber protein)|
          Length = 386

 Score =  111 bits (278), Expect = 1e-24
 Identities = 58/132 (43%), Positives = 79/132 (59%)
 Frame = -2

Query: 467 EARLADYFDVLAGTSTRGPVTTLLTIPNKKRRPVFAAKDIQAFYMDHAPRIFPQLRGAFG 288
           +ARLADYFDV+ GTST G +T ++T PN+  RP  AAKDI  FY +H P IF      F 
Sbjct: 63  DARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIFNYSGSIF- 121

Query: 287 RIMRILRSFSGPCYDGKYLHEVVRKKLGSGRLHQTLTNVVIPTFDIRRLQSIMFLSYEVS 108
                     GP YDGKYL +V+++KLG  R+HQ LT V I +FDI+  + ++F    ++
Sbjct: 122 ----------GPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLA 171

Query: 107 HFPPLSNLLGDL 72
             P L   + D+
Sbjct: 172 ESPQLDAKMYDI 183

>PAT1_SOLTU (P15476) Patatin B1 precursor (Potato tuber protein) (Fragment)|
          Length = 377

 Score =  111 bits (277), Expect = 2e-24
 Identities = 58/132 (43%), Positives = 79/132 (59%)
 Frame = -2

Query: 467 EARLADYFDVLAGTSTRGPVTTLLTIPNKKRRPVFAAKDIQAFYMDHAPRIFPQLRGAFG 288
           +ARLADYFDV+ GTST G +T ++T PN+  RP  AAKDI  FY +H P IF      F 
Sbjct: 54  DARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIFNYSGSIF- 112

Query: 287 RIMRILRSFSGPCYDGKYLHEVVRKKLGSGRLHQTLTNVVIPTFDIRRLQSIMFLSYEVS 108
                     GP YDGKYL +V+++KLG  R+HQ LT V I +FDI+  + ++F    ++
Sbjct: 113 ----------GPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLA 162

Query: 107 HFPPLSNLLGDL 72
             P L   + D+
Sbjct: 163 KSPELDAKMYDI 174

>FIXB_ECOL6 (P59674) Protein fixB|
          Length = 313

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
 Frame = -2

Query: 578 MHQKMLLSLETHSFLIDDLDG---VPXXXXXXXXXXLDGAEARLADYFDVLAGTSTRGPV 408
           M+    L+ + ++F+++D DG   +               +  + DY DV+A T  +   
Sbjct: 21  MNGAQALANQINTFVLNDADGAQAIQLGANHVWKLSGKPDDRMIEDYADVMADTIRQHGA 80

Query: 407 TTLLTIPNKKRRPVFAAK 354
             L+ +PN +R  + AAK
Sbjct: 81  DGLVLLPNTRRGKLLAAK 98


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,311,144
Number of Sequences: 219361
Number of extensions: 1852255
Number of successful extensions: 4113
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4108
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)