Clone Information

BLAST Search Result

Clone Name	rbah60e04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DCE1_ARATH (Q42521) Glutamate decarboxylase 1 (EC 4.1.1.15) (GAD 1)	226	7e-59
2	DCE2_ARATH (Q42472) Glutamate decarboxylase 2 (EC 4.1.1.15) (GAD 2)	213	5e-55
3	DCE_PETHY (Q07346) Glutamate decarboxylase (EC 4.1.1.15) (GAD)	211	2e-54
4	DCE_LYCES (P54767) Glutamate decarboxylase (EC 4.1.1.15) (GAD) (...	184	2e-46
5	DCEC_LISIN (Q928K4) Probabl glutamate decarboxylase gamma (EC 4....	74	5e-13
6	DCE_LACLC (O30418) Glutamate decarboxylase (EC 4.1.1.15)	74	6e-13
7	DCEB_LISIN (Q928R9) Glutamate decarboxylase beta (EC 4.1.1.15) (...	73	1e-12
8	DCE_LACLA (Q9CG20) Glutamate decarboxylase (EC 4.1.1.15) (GAD)	72	1e-12
9	DCEB_LISMO (Q9EYW9) Glutamate decarboxylase beta (EC 4.1.1.15) (...	72	2e-12
10	DCEC_LISMO (Q8Y4K4) Probabl glutamate decarboxylase gamma (EC 4....	70	8e-12
11	DCEB_SHIFL (P69912) Glutamate decarboxylase beta (EC 4.1.1.15) (...	65	2e-10
12	DCEB_ECOLI (P69910) Glutamate decarboxylase beta (EC 4.1.1.15) (...	65	2e-10
13	DCEB_ECOL6 (Q8FHG5) Glutamate decarboxylase beta (EC 4.1.1.15) (...	65	2e-10
14	DCEB_ECO57 (P69911) Glutamate decarboxylase beta (EC 4.1.1.15) (...	65	2e-10
15	DCEA_SHIFL (Q83PR1) Glutamate decarboxylase alpha (EC 4.1.1.15) ...	65	2e-10
16	DCEA_ECOLI (P69908) Glutamate decarboxylase alpha (EC 4.1.1.15) ...	65	2e-10
17	DCEA_ECOL6 (P69909) Glutamate decarboxylase alpha (EC 4.1.1.15) ...	65	2e-10
18	DCEA_LISMO (Q9F5P3) Glutamate decarboxylase alpha (EC 4.1.1.15) ...	64	6e-10
19	DCEA_ECO57 (P58228) Glutamate decarboxylase alpha (EC 4.1.1.15) ...	64	6e-10
20	DCE_YEAST (Q04792) Glutamate decarboxylase (EC 4.1.1.15) (GAD)	52	2e-06
21	MFNA_ARCFU (O28275) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)	39	0.021
22	PFDB_SULAC (Q4JB32) Prefoldin beta subunit (GimC beta subunit)	37	0.080
23	IF2_CORGL (Q8NP40) Translation initiation factor IF-2	36	0.14
24	Y1980_VIBPA (Q87N95) UPF0313 protein VP1980	34	0.40
25	CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor	34	0.52
26	GBRB_DROSI (Q9BLY8) Gamma-aminobutyric-acid receptor beta subuni...	33	1.2
27	GBRB_DROME (P25123) Gamma-aminobutyric-acid receptor beta subuni...	33	1.2
28	MFNA_PYRAB (Q9UZD5) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)	32	1.5
29	GRIK5_RAT (Q63273) Glutamate receptor, ionotropic kainate 5 prec...	32	2.0
30	GRIK5_MOUSE (Q61626) Glutamate receptor, ionotropic kainate 5 pr...	32	2.0
31	ANC1_CAEEL (Q9N4M4) Nuclear anchorage protein 1 (Anchorage 1 pro...	32	2.6
32	CCHCR_GORGO (Q8HZ59) Coiled-coil alpha-helical rod protein 1 (Al...	31	4.4
33	MFNA_METTH (O27188) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)	31	4.4
34	MFNA_METMA (Q8PXA5) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)	31	4.4
35	SYQ_HAEDU (Q7VLM3) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glu...	30	5.7
36	TILS_ACIAD (Q6F880) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR...	30	5.7
37	IE62_VZVD (P09310) Transcriptional transactivator IE62 (Immediat...	30	5.7
38	IF2_DESVH (Q72ER1) Translation initiation factor IF-2	30	5.7
39	IF2_COREF (Q8FPA7) Translation initiation factor IF-2	30	5.7
40	HLY1_AERHY (P55870) Hemolysin ahh1 precursor	30	7.5
41	RL3_LACLA (Q9CDW2) 50S ribosomal protein L3	30	7.5
42	WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC...	30	7.5
43	CCHCR_PONPY (Q8HZ58) Coiled-coil alpha-helical rod protein 1 (Al...	30	7.5
44	CCHCR_PANTR (Q8HZ60) Coiled-coil alpha-helical rod protein 1 (Al...	30	7.5
45	CCHCR_PANPA (Q8HZ57) Coiled-coil alpha-helical rod protein 1 (Al...	30	7.5
46	CCHCR_HUMAN (Q8TD31) Coiled-coil alpha-helical rod protein 1 (Al...	30	7.5
47	BLNK_HUMAN (Q8WV28) B-cell linker protein (Cytoplasmic adapter p...	30	7.5
48	TRIO_HUMAN (O75962) Triple functional domain protein (PTPRF-inte...	30	7.5
49	PFDB_SULTO (Q975H2) Prefoldin beta subunit (GimC beta subunit)	30	7.5
50	ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1	30	9.7
51	NIFM_AZOVI (P14890) Protein nifM	30	9.7
52	TRMD_MYCPA (Q73VN9) tRNA (guanine-N(1)-)-methyltransferase (EC 2...	30	9.7
53	UVRC_BRUSU (Q8G1L5) UvrABC system protein C (Protein uvrC) (Exci...	30	9.7
54	UVRC_BRUME (Q8YGA9) UvrABC system protein C (Protein uvrC) (Exci...	30	9.7
55	UVRC_BRUAB (Q57E41) UvrABC system protein C (Protein uvrC) (Exci...	30	9.7
56	UVRC_BRUA2 (Q2YN35) UvrABC system protein C (Protein uvrC) (Exci...	30	9.7
57	CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor	30	9.7

>DCE1_ARATH (Q42521) Glutamate decarboxylase 1 (EC 4.1.1.15) (GAD 1)|
          Length = 502

 Score =  226 bits (575), Expect = 7e-59
 Identities = 112/167 (67%), Positives = 134/167 (80%), Gaps = 9/167 (5%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKDSSRHDEFEISEFL 541
           G EGYRN+M+NC+EN +VL+EGLE+T RFNIVSKD+GVPLVAFSLKDSS H EFEIS+ L
Sbjct: 336 GHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDML 395

Query: 540 RRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELDALPSR----- 376
           RR+GWIVPAYTMPP+AQH+TVLRVV+REDFSRT AERLVIDIEKV+ ELD LPSR     
Sbjct: 396 RRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDELPSRVIHKI 455

Query: 375 SSGPSLQHPNGD----TVSEKDLARQREVVSVWKRAVAARKKTQGVC 247
           S G      N D    TV + D+ +QR++++ WK+ VA RKKT G+C
Sbjct: 456 SLGQEKSESNSDNLMVTVKKSDIDKQRDIITGWKKFVADRKKTSGIC 502

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>DCE2_ARATH (Q42472) Glutamate decarboxylase 2 (EC 4.1.1.15) (GAD 2)|
          Length = 494

 Score =  213 bits (542), Expect = 5e-55
 Identities = 107/160 (66%), Positives = 125/160 (78%), Gaps = 2/160 (1%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKDSSRHDEFEISEFL 541
           GFEGY+N+M+NC EN +VLKEG+E+T RFNIVSKDQGVP+VAFSLKD S H+EFEISE L
Sbjct: 335 GFEGYKNVMENCIENMVVLKEGIEKTERFNIVSKDQGVPVVAFSLKDHSFHNEFEISEML 394

Query: 540 RRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELDALPSRSSGPS 361
           RRFGWIVPAYTMP DAQH+TVLRVV+REDFSRT AERLV DI KVLHELD LPS+ S   
Sbjct: 395 RRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVADISKVLHELDTLPSKISKKM 454

Query: 360 LQHPNGDTVSEKDLARQ--REVVSVWKRAVAARKKTQGVC 247
                 + V EK + ++   EV+  W++ V  RKK  GVC
Sbjct: 455 GIEGIAENVKEKKMEKEILMEVIVGWRKFVKERKKMNGVC 494

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>DCE_PETHY (Q07346) Glutamate decarboxylase (EC 4.1.1.15) (GAD)|
          Length = 500

 Score =  211 bits (536), Expect = 2e-54
 Identities = 108/165 (65%), Positives = 130/165 (78%), Gaps = 7/165 (4%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKDSSRHDEFEISEFL 541
           G+EGY+N+M+NCQENA VL+EGLE+TGRFNI+SK+ GVPLVAFSLKD+ +H+EFEISE L
Sbjct: 336 GYEGYKNVMENCQENASVLREGLEKTGRFNIISKEIGVPLVAFSLKDNRQHNEFEISETL 395

Query: 540 RRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELDALPSR----- 376
           RRFGWIVPAYTMPP+AQH+TVLRVV+REDFSRT AERLV DIEKVLHELD LP+R     
Sbjct: 396 RRFGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVRDIEKVLHELDTLPARVNAKL 455

Query: 375 SSGPSLQHPNGDTVSEK-DLARQREVVSVWKRAV-AARKKTQGVC 247
           +        NG  V +K D   Q E+++ WK+ V   +KKT  VC
Sbjct: 456 AVAEEQAAANGSEVHKKTDSEVQLEMITAWKKFVEEKKKKTNRVC 500

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>DCE_LYCES (P54767) Glutamate decarboxylase (EC 4.1.1.15) (GAD) (ERT D1)|
          Length = 502

 Score =  184 bits (468), Expect = 2e-46
 Identities = 96/173 (55%), Positives = 118/173 (68%), Gaps = 15/173 (8%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKDSSRHDEFEISEFL 541
           GFEGY+N+M NC  NA VL EG+ + GRF+IVSKD GVP+VAFSL+DSS++  FE+SE L
Sbjct: 337 GFEGYKNVMKNCLSNAKVLTEGITKMGRFDIVSKDVGVPVVAFSLRDSSKYTVFEVSEHL 396

Query: 540 RRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELDALPSR----- 376
           RRFGWIVPAYTMPPDA+H+ VLRVV+REDFS + AERLV DIEK+L ELD  P R     
Sbjct: 397 RRFGWIVPAYTMPPDAEHIAVLRVVIREDFSHSLAERLVSDIEKILSELDTQPPRLPTKA 456

Query: 375 ----------SSGPSLQHPNGDTVSEKDLARQREVVSVWKRAVAARKKTQGVC 247
                       G  L H + DTV       Q++++  W++   A KKT GVC
Sbjct: 457 VRVTAEEVRDDKGDGLHHFHMDTVE-----TQKDIIKHWRK--IAGKKTSGVC 502

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>DCEC_LISIN (Q928K4) Probabl glutamate decarboxylase gamma (EC 4.1.1.15)|
           (GAD-gamma)
          Length = 467

 Score = 73.9 bits (180), Expect = 5e-13
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKD--SSRHDEFEISE 547
           GFEGYR I +  ++ A+ L + +E++G F I++    +P+V + LKD        +++++
Sbjct: 337 GFEGYREIHEKTKKTALYLSKTVEKSGYFEIINDGSNLPIVCYKLKDDLDVEWTLYDLAD 396

Query: 546 FLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELD 391
            L   GW VPAY +P D     + R V R D     AE    D    LH L+
Sbjct: 397 QLLMKGWQVPAYPLPADLSDTIIQRFVCRADLGYNVAEEFAADFADALHNLE 448

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>DCE_LACLC (O30418) Glutamate decarboxylase (EC 4.1.1.15)|
          Length = 466

 Score = 73.6 bits (179), Expect = 6e-13
 Identities = 36/112 (32%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKDSSRH--DEFEISE 547
           GF+GY+ I +   + AM L E +E+TG F I++    +P+V + LK++S    + +++++
Sbjct: 336 GFDGYKAIHERTHKVAMYLAEEIEKTGMFEIMNDGAQLPIVCYKLKENSNRGWNLYDLAD 395

Query: 546 FLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELD 391
            L   GW VPAY +P + ++  + R+V+R DF    A   V D+++ +  L+
Sbjct: 396 RLLMKGWQVPAYPLPKNLENEIIQRLVIRADFGMNMAFNYVQDMQEAIDALN 447

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>DCEB_LISIN (Q928R9) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)|
          Length = 464

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKDSS--RHDEFEISE 547
           GFEGYR I     + A  L   +E+TG F+I +    +P+V + LKD +  +   +++++
Sbjct: 334 GFEGYRTIHQKTSDVAQYLAHAVEQTGYFDIYNDGSHLPIVCYKLKDDANVKWTLYDLAD 393

Query: 546 FLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELD 391
            L+  GW VPAY +P + +++ + R V R D     AE  + D +  + EL+
Sbjct: 394 RLQMRGWQVPAYPLPKNLENIIIQRYVCRADLGFNMAEEFIQDFQASIQELN 445

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>DCE_LACLA (Q9CG20) Glutamate decarboxylase (EC 4.1.1.15) (GAD)|
          Length = 466

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 35/112 (31%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKDSSRH--DEFEISE 547
           GF+GY+ I +   + AM L + +E+TG F I++    +P+V + LK+ S    + +++++
Sbjct: 336 GFDGYKAIHERTHKVAMFLAKEIEKTGMFEIMNDGSQLPIVCYKLKEDSNRGWNLYDLAD 395

Query: 546 FLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELD 391
            L   GW VPAY +P + ++  + R+V+R DF    A   V D+++ +  L+
Sbjct: 396 RLLMKGWQVPAYPLPKNLENEIIQRLVIRADFGMNMAFNYVQDMQEAIEALN 447

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>DCEB_LISMO (Q9EYW9) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)|
          Length = 464

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKDSSRHD--EFEISE 547
           GFEGYR I     + A  L   +E+TG F+I +    +P+V + LKD +  +   +++++
Sbjct: 334 GFEGYRTIHQKTSDVAQYLAHAVEQTGYFDIFNDGSHLPIVCYKLKDDANVNWTLYDLAD 393

Query: 546 FLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELD 391
            L+  GW VPAY +P   +++ + R V R D     AE  + D +  + EL+
Sbjct: 394 RLQMRGWQVPAYPLPKSLENIIIQRYVCRADLGFNMAEEFIQDFQASIQELN 445

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>DCEC_LISMO (Q8Y4K4) Probabl glutamate decarboxylase gamma (EC 4.1.1.15)|
           (GAD-gamma)
          Length = 467

 Score = 69.7 bits (169), Expect = 8e-12
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKD--SSRHDEFEISE 547
           GFEGYR I +  ++ A+ L + +E++G F I++    +P+V + +K+        +++++
Sbjct: 337 GFEGYREIHEKTKKTAIYLAKTVEKSGYFEIINDGANLPIVCYKMKEGLDVEWTLYDLAD 396

Query: 546 FLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELD 391
            L   GW VPAY +P D     + R V R D     AE    D    +H L+
Sbjct: 397 QLLMKGWQVPAYPLPADLSDTIIQRFVCRADLGYNVAEEFAADFADAIHNLE 448

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>DCEB_SHIFL (P69912) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)|
          Length = 466

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSK---DQGVPLVAFSLKDSSR--HDEFE 556
           G EGY  + +   + A  L + + + G +  +     D+G+P V F LKD     +  ++
Sbjct: 335 GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYD 394

Query: 555 ISEFLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELDALP 382
           +SE LR  GW VPA+T+  +A  + V+R++ R  F   FAE L+ D +  L  L   P
Sbjct: 395 LSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452

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>DCEB_ECOLI (P69910) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)|
          Length = 466

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSK---DQGVPLVAFSLKDSSR--HDEFE 556
           G EGY  + +   + A  L + + + G +  +     D+G+P V F LKD     +  ++
Sbjct: 335 GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYD 394

Query: 555 ISEFLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELDALP 382
           +SE LR  GW VPA+T+  +A  + V+R++ R  F   FAE L+ D +  L  L   P
Sbjct: 395 LSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452

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>DCEB_ECOL6 (Q8FHG5) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)|
          Length = 466

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSK---DQGVPLVAFSLKDSSR--HDEFE 556
           G EGY  + +   + A  L + + + G +  +     D+G+P V F LKD     +  ++
Sbjct: 335 GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYD 394

Query: 555 ISEFLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELDALP 382
           +SE LR  GW VPA+T+  +A  + V+R++ R  F   FAE L+ D +  L  L   P
Sbjct: 395 LSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452

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>DCEB_ECO57 (P69911) Glutamate decarboxylase beta (EC 4.1.1.15) (GAD-beta)|
          Length = 466

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSK---DQGVPLVAFSLKDSSR--HDEFE 556
           G EGY  + +   + A  L + + + G +  +     D+G+P V F LKD     +  ++
Sbjct: 335 GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYD 394

Query: 555 ISEFLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELDALP 382
           +SE LR  GW VPA+T+  +A  + V+R++ R  F   FAE L+ D +  L  L   P
Sbjct: 395 LSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452

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>DCEA_SHIFL (Q83PR1) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)|
          Length = 466

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSK---DQGVPLVAFSLKDSSR--HDEFE 556
           G EGY  + +   + A  L + + + G +  +     D+G+P V F LKD     +  ++
Sbjct: 335 GREGYTKVQNASYQVAAYLADEIAKQGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYD 394

Query: 555 ISEFLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELDALP 382
           +SE LR  GW VPA+T+  +A  + V+R++ R  F   FAE L+ D +  L  L   P
Sbjct: 395 LSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452

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>DCEA_ECOLI (P69908) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)|
          Length = 466

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSK---DQGVPLVAFSLKDSSR--HDEFE 556
           G EGY  + +   + A  L + + + G +  +     D+G+P V F LKD     +  ++
Sbjct: 335 GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYD 394

Query: 555 ISEFLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELDALP 382
           +SE LR  GW VPA+T+  +A  + V+R++ R  F   FAE L+ D +  L  L   P
Sbjct: 395 LSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452

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>DCEA_ECOL6 (P69909) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)|
          Length = 466

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSK---DQGVPLVAFSLKDSSR--HDEFE 556
           G EGY  + +   + A  L + + + G +  +     D+G+P V F LKD     +  ++
Sbjct: 335 GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYD 394

Query: 555 ISEFLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELDALP 382
           +SE LR  GW VPA+T+  +A  + V+R++ R  F   FAE L+ D +  L  L   P
Sbjct: 395 LSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452

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>DCEA_LISMO (Q9F5P3) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)|
          Length = 462

 Score = 63.5 bits (153), Expect = 6e-10
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKDSSR--HDEFEISE 547
           G+EGYR I    ++ A+ L + +  TG F I +    +P+V + LKD +      +++++
Sbjct: 332 GYEGYRQIHMRTRDGALQLSQAVAETGLFEIYNDGANLPIVCYKLKDDANVAWTLYDLAD 391

Query: 546 FLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELD 391
            L+  GW VPAY +P +  +  + R V R D  +        D+ + + EL+
Sbjct: 392 RLQMKGWQVPAYPLPKEMGNTIIQRYVCRGDLGQNMVTAFKNDLSESIEELN 443

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>DCEA_ECO57 (P58228) Glutamate decarboxylase alpha (EC 4.1.1.15) (GAD-alpha)|
          Length = 466

 Score = 63.5 bits (153), Expect = 6e-10
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSK---DQGVPLVAFSLKDSSR--HDEFE 556
           G EGY  + +   + A  L + + + G +  +     D+G+P V F LK+     +  ++
Sbjct: 335 GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKEGEDPGYTLYD 394

Query: 555 ISEFLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELDALP 382
           +SE LR  GW VPA+T+  +A  + V+R++ R  F   FAE L+ D +  L  L   P
Sbjct: 395 LSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHP 452

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>DCE_YEAST (Q04792) Glutamate decarboxylase (EC 4.1.1.15) (GAD)|
          Length = 585

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
 Frame = -2

Query: 612 GVPLVAFSLKDSSRHDEFE------ISEFLRRFGWIVPAYTMPP---DAQHVTVLRVVVR 460
           GVPLVAF L     H+E+       +S  LR  GWI+P Y +P     +    VLRVV R
Sbjct: 441 GVPLVAFKLSKKF-HEEYPEVPQAILSSLLRGRGWIIPNYPLPKATDGSDEKEVLRVVFR 499

Query: 459 EDFSRTFAERLVIDIEKVLHEL 394
            +     A+ L++DIE +L +L
Sbjct: 500 SEMKLDLAQLLIVDIESILTKL 521

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>MFNA_ARCFU (O28275) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)|
          Length = 367

 Score = 38.5 bits (88), Expect = 0.021
 Identities = 28/106 (26%), Positives = 44/106 (41%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKDSSRHDEFEISEFL 541
           GFEG R ++ NC +N  +L E +   G   ++     V  V+F   ++ R     I E L
Sbjct: 273 GFEGMREVVKNCLKNTRILVEEMRDLGFEPVIEPVMNV--VSFRTDEAER-----IKEEL 325

Query: 540 RRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVL 403
            R  W++     P        +R VV    +    +  + D  KVL
Sbjct: 326 YRMRWVISTIREP------KAIRFVVMPHVTEEVIKNFISDFRKVL 365

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>PFDB_SULAC (Q4JB32) Prefoldin beta subunit (GimC beta subunit)|
          Length = 125

 Score = 36.6 bits (83), Expect = 0.080
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
 Frame = -2

Query: 507 MPPDAQHVTVLRVVVREDFSRTFAERLVID-----IEKVLHELDALPS-----RSSGPSL 358
           +PP+ Q   V    ++E  +R  AER VID     + KVL EL  LPS     +  G  L
Sbjct: 5   LPPELQTELVKLQQLQEQLNRVIAERSVIDSQLREVNKVLDELKQLPSDTIIYKIVGNLL 64

Query: 357 QHPNGDTVSEKDLARQREVVSVWKR 283
              N D V EK+L  Q+ ++ +  R
Sbjct: 65  VKVNKDNV-EKELDDQKTILELRSR 88

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>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
 Frame = -1

Query: 703 EHHGQLPGERDGA------QGGAGAHGPVQHRVQGSGRPAGGLLPQG 581
           +  GQ  G+RDG       + GAGA GP   R QG  RP GG  PQG
Sbjct: 248 QRDGQRDGQRDGQGNRGGQRQGAGAGGP---RPQGGPRPQGGSRPQG 291

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>Y1980_VIBPA (Q87N95) UPF0313 protein VP1980|
          Length = 777

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -1

Query: 694 GQLPGERDGAQGGAGAHGPVQHRVQGSGRPAGGLLPQGQQPARR 563
           GQ P        G GA+ P   + QG GRP G   P GQ+  +R
Sbjct: 733 GQRPASNGQRPSGNGANRPAGSKPQGQGRPQGQGKPAGQRKPKR 776

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>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor|
          Length = 1356

 Score = 33.9 bits (76), Expect = 0.52
 Identities = 28/86 (32%), Positives = 34/86 (39%), Gaps = 24/86 (27%)
 Frame = -1

Query: 715  RGVQEHHGQLPGERDGAQGGAGAHGPVQHR----------------VQGSGRPAGGLLPQ 584
            RG    HG  P  +DG  GG GA GPV HR                + G   PAGG   Q
Sbjct: 1047 RGPAGPHG--PPGKDGRAGGHGAIGPVGHRGSPGHLGPAGPPGSPGLPGPAGPAGGGYDQ 1104

Query: 583  --------GQQPARRVRDLRVPAPLR 530
                      QP+ R +D  V A ++
Sbjct: 1105 SGGYDEYRADQPSFRAKDYEVDATIK 1130

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>GBRB_DROSI (Q9BLY8) Gamma-aminobutyric-acid receptor beta subunit precursor|
           (GABA(A) receptor) (Protein cyclodiene resistance)
          Length = 606

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -1

Query: 715 RGVQEHHGQLPGERDGAQGGAGAHGPVQHRVQGSGRPAGGLLPQGQQPA 569
           RG  + HG  PG+  G  GG G  G       G G P GG  P+   PA
Sbjct: 501 RGGPQSHGPGPGQGGGPPGGGGGGG------GGGGPPEGGGDPEAAVPA 543

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>GBRB_DROME (P25123) Gamma-aminobutyric-acid receptor beta subunit precursor|
           (GABA(A) receptor) (Protein cyclodiene resistance)
          Length = 606

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -1

Query: 715 RGVQEHHGQLPGERDGAQGGAGAHGPVQHRVQGSGRPAGGLLPQGQQPA 569
           RG  + HG  PG+  G  GG G  G       G G P GG  P+   PA
Sbjct: 501 RGGPQSHGPGPGQGGGPPGGGGGGG------GGGGPPEGGGDPEAAVPA 543

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>MFNA_PYRAB (Q9UZD5) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)|
          Length = 384

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 25/106 (23%), Positives = 48/106 (45%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKDSSRHDEFEISEFL 541
           GFEGYR I+    E +    E +++     +V ++  + +V+F  K+  +     +   L
Sbjct: 292 GFEGYREIVRKAMELSRWFAEEIKKLNNAWLV-REPMLNIVSFQTKNLRK-----VEREL 345

Query: 540 RRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVL 403
           +R GW + A        H   +R+V     ++   E  + D+ +VL
Sbjct: 346 KRRGWGISA--------HRGYIRIVFMPHVTKEMVEEFLRDLREVL 383

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>GRIK5_RAT (Q63273) Glutamate receptor, ionotropic kainate 5 precursor|
            (Glutamate receptor KA-2) (KA2)
          Length = 979

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 18/38 (47%), Positives = 19/38 (50%)
 Frame = -1

Query: 670  GAQGGAGAHGPVQHRVQGSGRPAGGLLPQGQQPARRVR 557
            GA G AGAHG  Q  +   G P GG  PQ   P   VR
Sbjct: 894  GAGGDAGAHGGPQRLLDDPG-PPGGPRPQAPTPCTHVR 930

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>GRIK5_MOUSE (Q61626) Glutamate receptor, ionotropic kainate 5 precursor|
            (Glutamate receptor KA-2) (KA2) (Glutamate receptor
            gamma-2) (GluR gamma-2)
          Length = 979

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 18/38 (47%), Positives = 19/38 (50%)
 Frame = -1

Query: 670  GAQGGAGAHGPVQHRVQGSGRPAGGLLPQGQQPARRVR 557
            GA G AGAHG  Q  +   G P GG  PQ   P   VR
Sbjct: 894  GAGGDAGAHGGPQRLLDDPG-PPGGPRPQAPTPCTHVR 930

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>ANC1_CAEEL (Q9N4M4) Nuclear anchorage protein 1 (Anchorage 1 protein) (Nesprin|
            homolog)
          Length = 8545

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = -2

Query: 399  ELDALPSRSSGPSLQHPNGDTVSEKDLARQREVVSVWKRAV 277
            E D+L SRS G     P+  T+SE+ L RQR   S W+R +
Sbjct: 8456 EFDSLDSRSDGLLSPIPDDSTLSEEQLRRQR---SRWRRVL 8493

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>CCHCR_GORGO (Q8HZ59) Coiled-coil alpha-helical rod protein 1 (Alpha helical|
           coiled-coil rod protein)
          Length = 782

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -2

Query: 366 PSLQHPNGDTVSEKDLARQREVVSVWKRAVAARKKTQG 253
           P +Q P    VSE+ L  QR  V++W+R V++ ++  G
Sbjct: 36  PLVQPPGHQDVSERQLDTQRPQVTMWERDVSSDRQEPG 73

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>MFNA_METTH (O27188) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)|
          Length = 363

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 27/105 (25%), Positives = 43/105 (40%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKDSSRHDEFEISEFL 541
           G EGYR +          L++GL       +V  +  +  VAF+      H   E+++ L
Sbjct: 265 GREGYRKLALRVMGVTRRLRDGLVELDYQLVVEPELNI--VAFNHPAMGPH---ELADRL 319

Query: 540 RRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKV 406
              GW V   + PP       +RVV+         E L+ D+E +
Sbjct: 320 EELGWAVSVSSCPP------AIRVVLMPHIMEEHIELLLRDLEGI 358

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>MFNA_METMA (Q8PXA5) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)|
          Length = 398

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 29/109 (26%), Positives = 45/109 (41%)
 Frame = -2

Query: 720 GFEGYRNIMDNCQENAMVLKEGLERTGRFNIVSKDQGVPLVAFSLKDSSRHDEFEISEFL 541
           G+EGYR  +  C E    + E   + G   ++     V  +     D  R         L
Sbjct: 299 GYEGYRKNVQYCMELTSKIVEEARKLGFEPLIEPVMNVVALKVPNPDLVR------ERLL 352

Query: 540 RRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLHEL 394
           ++FGW V + T  P A     LR+V+    S    E  + D++KV  E+
Sbjct: 353 KKFGWNV-SITRTPRA-----LRLVLMPHNSPEDIELFLEDLKKVTAEI 395

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>SYQ_HAEDU (Q7VLM3) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA|
           ligase) (GlnRS)
          Length = 556

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
 Frame = -2

Query: 555 ISEFLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERL-VIDIEKVLHELDALPS 379
           + EF RR G      T   +      L   +RED +      + VI+  +V+ E  A P 
Sbjct: 313 LREFCRRIG-----VTKQDNVVEYAALEACIREDLNENAPRAMAVINPVRVVIENVAEPE 367

Query: 378 RSSGPSLQHPNGDTVSEKDLARQREV 301
               P+  HPN   + E+DL   RE+
Sbjct: 368 ILKAPN--HPNRPELGERDLPFTREI 391

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>TILS_ACIAD (Q6F880) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 459

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = -2

Query: 465 VREDFSRTFAERLVIDIEKVLHELDALPSRSSGPSLQHPNGDTVSEKDLARQREVVSVWK 286
           ++E  SRT    L+ D +++LHE+        G  L H +   + +  LARQR+++S W 
Sbjct: 217 MQEAISRTSI--LMQDADEILHEVLQQDLNQCG-DLNHLDLSRLQQLSLARQRQLLSFWM 273

Query: 285 RAVA 274
           +  A
Sbjct: 274 KGKA 277

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>IE62_VZVD (P09310) Transcriptional transactivator IE62 (Immediate-early|
           protein 62) (IE62)
          Length = 1310

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 19/62 (30%), Positives = 27/62 (43%)
 Frame = -1

Query: 715 RGVQEHHGQLPGERDGAQGGAGAHGPVQHRVQGSGRPAGGLLPQGQQPARRVRDLRVPAP 536
           R  Q   G+ PG+       A   G V  + Q   RPA     QG+ P ++   ++VP P
Sbjct: 207 RQTQSISGKKPGDEQAGHAHASGDGVVLQKTQ---RPA-----QGKSPKKKTLKVKVPLP 258

Query: 535 LR 530
            R
Sbjct: 259 AR 260

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>IF2_DESVH (Q72ER1) Translation initiation factor IF-2|
          Length = 1079

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 682 GERDGAQGGAGAHGPVQHRVQGSGRPAGGLLPQGQQ 575
           G R G     G + P   R +G  RPAGG  P+GQ+
Sbjct: 339 GYRPGGPRPEGGYRPGAPRPEGGYRPAGGPRPEGQR 374

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>IF2_COREF (Q8FPA7) Translation initiation factor IF-2|
          Length = 964

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = -1

Query: 694 GQLPGERDGA---QGGAGAHGPVQHRVQGSGRPAGGLLP--QGQQPAR 566
           GQ PG   G    QGG  A    Q R  G  RP+  ++P   GQ PA+
Sbjct: 240 GQRPGPGSGGPRPQGGNAAGAASQERQGGGRRPSPAMMPPTPGQMPAK 287

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>HLY1_AERHY (P55870) Hemolysin ahh1 precursor|
          Length = 577

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = -1

Query: 694 GQLPGERDGAQGGAGAHGPVQHRVQGSGRPAGGLLPQGQQPARRVRDLRVPAPLR 530
           G  P  R      + A  P   R+ G   PA     + Q  AR +RD RVPA L+
Sbjct: 291 GPRPSWRRRPSSASSASSPTTPRITGLNAPAERPEGEFQLGARSIRDRRVPALLQ 345

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>RL3_LACLA (Q9CDW2) 50S ribosomal protein L3|
          Length = 207

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 691 QLPGERDGAQGGAGAHGPVQHRVQGS-GRPAGGLLPQGQQPARRVRDLRV 545
           Q P +R G   G  AHG   HR  GS G  A   +P+G++ A R+ + RV
Sbjct: 118 QGPIKRHGQSRGPMAHGSRYHRRPGSMGPVAANKVPKGKKLAGRMGNKRV 167

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>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)|
          Length = 1336

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = -1

Query: 670 GAQGGAGAHGPVQHRVQGSGRPAGGLLPQGQQ 575
           G QG  G  GP  H  QG G P G + PQG Q
Sbjct: 630 GPQGQMGPQGPPLH--QGGGGPQGFMGPQGPQ 659

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>CCHCR_PONPY (Q8HZ58) Coiled-coil alpha-helical rod protein 1 (Alpha helical|
           coiled-coil rod protein)
          Length = 782

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -2

Query: 366 PSLQHPNGDTVSEKDLARQREVVSVWKRAVAARKKTQG 253
           P +Q P    VSE+ L  QR  V++W+R V++ ++  G
Sbjct: 36  PLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQEPG 73

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>CCHCR_PANTR (Q8HZ60) Coiled-coil alpha-helical rod protein 1 (Alpha helical|
           coiled-coil rod protein)
          Length = 782

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -2

Query: 366 PSLQHPNGDTVSEKDLARQREVVSVWKRAVAARKKTQG 253
           P +Q P    VSE+ L  QR  V++W+R V++ ++  G
Sbjct: 36  PLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQEPG 73

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>CCHCR_PANPA (Q8HZ57) Coiled-coil alpha-helical rod protein 1 (Alpha helical|
           coiled-coil rod protein)
          Length = 782

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -2

Query: 366 PSLQHPNGDTVSEKDLARQREVVSVWKRAVAARKKTQG 253
           P +Q P    VSE+ L  QR  V++W+R V++ ++  G
Sbjct: 36  PLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQEPG 73

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>CCHCR_HUMAN (Q8TD31) Coiled-coil alpha-helical rod protein 1 (Alpha helical|
           coiled-coil rod protein) (Putative gene 8 protein) (Pg8)
          Length = 782

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -2

Query: 366 PSLQHPNGDTVSEKDLARQREVVSVWKRAVAARKKTQG 253
           P +Q P    VSE+ L  QR  V++W+R V++ ++  G
Sbjct: 36  PLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQEPG 73

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>BLNK_HUMAN (Q8WV28) B-cell linker protein (Cytoplasmic adapter protein)|
           (B-cell adapter containing SH2 domain protein) (B-cell
           adapter containing Src homology 2 domain protein) (Src
           homology 2 domain-containing leukocyte protein of 65
           kDa) (SLP-65)
          Length = 456

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +2

Query: 107 GSNNGARRTINPAP*KPSRTREA*HKIITEIKSSRTAGEVNRLSSAQQTP 256
           G N+GA  T +P P  PS    A  K  T +K++  A + N  S  ++ P
Sbjct: 226 GRNSGAWETKSPPPAAPSPLPRAGKKPTTPLKTTPVASQQNASSVCEEKP 275

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>TRIO_HUMAN (O75962) Triple functional domain protein (PTPRF-interacting protein)|
          Length = 3038

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 19/59 (32%), Positives = 22/59 (37%)
 Frame = -1

Query: 706  QEHHGQLPGERDGAQGGAGAHGPVQHRVQGSGRPAGGLLPQGQQPARRVRDLRVPAPLR 530
            + H G   G   G  GG G  G       GSG   G     G     R R  R+P P+R
Sbjct: 2229 RNHSGGGGGGGSGGSGGGGGSGGGGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQPVR 2287

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>PFDB_SULTO (Q975H2) Prefoldin beta subunit (GimC beta subunit)|
          Length = 125

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
 Frame = -2

Query: 507 MPPDAQHVTVLRVVVREDFSRTFAERLVID-----IEKVLHELDALPSRSS-----GPSL 358
           +PP+ Q   V    +++  +R   E+ VID     + K+L EL  LP+ ++     G  L
Sbjct: 5   IPPELQTQLVKLQQLQDQLNRLLTEKNVIDSELREVNKILQELSQLPAGTTVYKIVGNLL 64

Query: 357 QHPNGDTVSEKDLARQREVVSVWKR 283
              + +TV +K+L  ++E++ +  R
Sbjct: 65  VKTDKETV-QKELDDRKEILELRSR 88

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>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1|
          Length = 346

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -1

Query: 715 RGVQEHHGQLPGERDGAQGGAGAHGPVQHRVQGS-GRPAGG 596
           RG +   GQ  G   G  GG G  GP Q    G+ G P GG
Sbjct: 207 RGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGG 247

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>NIFM_AZOVI (P14890) Protein nifM|
          Length = 292

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = -2

Query: 495 AQHVTVLRVVVREDFSRTFAERLVIDIEKVLHELDALPSRSSGPSLQHPNGDTVSEKDL 319
           AQH   + V + EDF     E     IE +L  L   P R +  +++H    T  +  L
Sbjct: 143 AQHKAHILVTINEDFPENTREAARTRIETILKRLRGKPERFAEQAMKHSECPTAMQGGL 201

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>TRMD_MYCPA (Q73VN9) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)|
           (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
          Length = 239

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = -2

Query: 579 SSRHDEFEISEFLRRFGWIVPAYTMPPDAQHVTVLRVVVREDFSRTFAERLVIDIEKVLH 400
           +SRHD+       RR     P+YT PP  + + V  V++  D +R  A R  + +++   
Sbjct: 164 ASRHDDSHSPALDRRLEG--PSYTRPPSWRGLDVPEVLLSGDHARIAAWRREVSLQRTRE 221

Query: 399 ELDALPSRSSGP 364
               L +   GP
Sbjct: 222 RRPELLADPVGP 233

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>UVRC_BRUSU (Q8G1L5) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 611

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 19/40 (47%), Positives = 22/40 (55%)
 Frame = +1

Query: 334 HRVAVGVLQGRPAAARGERVELVEHLLDVDDEALGEGAAE 453
           H+V V V Q      RGE+ ELV+H L    EALG   AE
Sbjct: 326 HKVQVSVPQ------RGEKKELVQHALTNAREALGRRLAE 359

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>UVRC_BRUME (Q8YGA9) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 611

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 19/40 (47%), Positives = 22/40 (55%)
 Frame = +1

Query: 334 HRVAVGVLQGRPAAARGERVELVEHLLDVDDEALGEGAAE 453
           H+V V V Q      RGE+ ELV+H L    EALG   AE
Sbjct: 326 HKVQVSVPQ------RGEKKELVQHALTNAREALGRRLAE 359

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>UVRC_BRUAB (Q57E41) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 627

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 19/40 (47%), Positives = 22/40 (55%)
 Frame = +1

Query: 334 HRVAVGVLQGRPAAARGERVELVEHLLDVDDEALGEGAAE 453
           H+V V V Q      RGE+ ELV+H L    EALG   AE
Sbjct: 342 HKVQVSVPQ------RGEKKELVQHALTNAREALGRRLAE 375

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>UVRC_BRUA2 (Q2YN35) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 611

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 19/40 (47%), Positives = 22/40 (55%)
 Frame = +1

Query: 334 HRVAVGVLQGRPAAARGERVELVEHLLDVDDEALGEGAAE 453
           H+V V V Q      RGE+ ELV+H L    EALG   AE
Sbjct: 326 HKVQVSVPQ------RGEKKELVQHALTNAREALGRRLAE 359

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>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor|
          Length = 1355

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -1

Query: 682 GERD--GAQGGAGAHGPVQHRVQGSGRPAGGLLPQGQQ 575
           GER   G  GGAG HGP      GS  P+G   P GQ+
Sbjct: 580 GERGAPGESGGAGPHGP-----SGSRGPSGAPGPDGQK 612


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,064,869
Number of Sequences: 219361
Number of extensions: 1498070
Number of successful extensions: 5678
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 5321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5645
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7366267610
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result