>RNE_BUCAP (Q8K9J9) Ribonuclease E (EC 3.1.4.-) (RNase E)|
          Length = 968

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = -3

Query: 162 KQNTKKHMENNKKKRLLL*IYMVQINMLSHVLDGGLRVYVCNTGYTGXKKI 10
           K N    ++NNKKK+LL  +     +  SHV D        NT YT  KKI
Sbjct: 621 KDNQVSSIDNNKKKQLLNKVKKNNNHQYSHVFDN-------NTKYTSLKKI 664

>INAR1_HUMAN (P17181) Interferon-alpha/beta receptor alpha chain precursor|
           (IFN-alpha-REC)
          Length = 557

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
 Frame = +2

Query: 338 PQLSYCVRALIH----RANRAD--SSSVASALANGSTVRLQLLLEIDFPLF*LWSLCAAA 499
           P   YCV+A  H    + N++   S +V      G+T ++ L++ I   LF L  +  AA
Sbjct: 398 PLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPGNTSKIWLIVGICIALFALPFVIYAA 457

Query: 500 KIIWRCHQDKFF 535
           K+  RC    FF
Sbjct: 458 KVFLRCINYVFF 469

>LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A chain)|
          Length = 3084

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -2

Query: 436  PHSAAIRQG*SNRRRIGTIRSVDQSSNAVTQLRN 335
            PHS A+R+G S+R  +G I++++ S +    LRN
Sbjct: 2448 PHSKAVRKGVSSRSYVGCIKNLEISRSTFDLLRN 2481


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,613,963
Number of Sequences: 219361
Number of extensions: 1878114
Number of successful extensions: 5148
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5145
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7592921998
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)