>gb|AY109595.1| Zea mays CL222_1 mRNA sequence
          Length = 1600

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 109/131 (83%), Gaps = 6/131 (4%)
 Strand = Plus / Minus

                                                                        
Query: 547  caaagcatgcctccattagccacccactgagcaaagcggtcagaatagtcgcgcgagtct 606
            ||||||||||||||||  || ||||| || ||||| |||||||||||||| ||   ||||
Sbjct: 1275 caaagcatgcctccatccgcgacccagtgcgcaaaccggtcagaatagtcccgaacgtct 1216

                                                                        
Query: 607  gagagctggctgcttgagcggga------caggtcatcccttccctcatcattgtgtcct 660
            |||| |||||||||||| |||||      || ||||||||||||||||||| ||||||||
Sbjct: 1215 gagacctggctgcttgaacgggaaagatccatgtcatcccttccctcatcagtgtgtcct 1156

                       
Query: 661  ggctcactgta 671
             | ||||||||
Sbjct: 1155 tgttcactgta 1145

>ref|XM_470554.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2340

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 157/197 (79%), Gaps = 6/197 (3%)
 Strand = Plus / Minus

                                                                        
Query: 541  tagtagcaaagcatgcctccattagccacccactgagcaaagcggtcagaatagtcgcgc 600
            ||||||||||||||||||||   | ||||||| || |  ||||||||||| ||||| || 
Sbjct: 2339 tagtagcaaagcatgcctccgccatccacccaatgcgtgaagcggtcagagtagtcacgg 2280

                                                                        
Query: 601  gagtctgagagctggctgcttgagcgggacag------gtcatcccttccctcatcattg 654
              |||||| |  |||||||||||||| |||||      |||||| |||||||||||||||
Sbjct: 2279 atgtctgacatttggctgcttgagcgtgacagatctgtgtcatctcttccctcatcattg 2220

                                                                        
Query: 655  tgtcctggctcactgtaagtagtagtagatccaacactgataccatccaatggtgagtga 714
            |||||  | |||||||| |  ||||| ||| ||| ||||| | ||||||  ||||| |  
Sbjct: 2219 tgtccctgttcactgtatgatgtagttgattcaatactgacaacatccatgggtgaattg 2160

                             
Query: 715  atgagtgatgacctctc 731
            |||||||||||||||||
Sbjct: 2159 atgagtgatgacctctc 2143

>dbj|AK100037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151A15, full
            insert sequence
          Length = 3741

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 157/200 (78%), Gaps = 9/200 (4%)
 Strand = Plus / Minus

                                                                        
Query: 541  tagtagcaaagcatgcctccattagccacccactgagcaaagcggtcagaatagtcgcgc 600
            ||||||||||||||||||||   | ||||||| || |  ||||||||||| ||||| || 
Sbjct: 2918 tagtagcaaagcatgcctccgccatccacccaatgcgtgaagcggtcagagtagtcacgg 2859

                                                                        
Query: 601  gagtctgagagctggctgcttgagcgggacag------gtcatcccttcc---ctcatca 651
              |||||| |  |||||||||||||| |||||      |||||| |||||   |||||||
Sbjct: 2858 atgtctgacatttggctgcttgagcgtgacagatctgtgtcatctcttccctgctcatca 2799

                                                                        
Query: 652  ttgtgtcctggctcactgtaagtagtagtagatccaacactgataccatccaatggtgag 711
            ||||||||  | |||||||| |  ||||| ||| ||| ||||| | ||||||  ||||| 
Sbjct: 2798 ttgtgtccctgttcactgtatgatgtagttgattcaatactgacaacatccatgggtgaa 2739

                                
Query: 712  tgaatgagtgatgacctctc 731
            |  |||||||||||||||||
Sbjct: 2738 ttgatgagtgatgacctctc 2719

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                           
Query: 541     tagtagcaaagcatgcctccattagccacccactgagcaaagcggtcagaatagtcgcgc 600
               ||||||||||||||||||||   | ||||||| || |  ||||||||||| ||||| || 
Sbjct: 4317074 tagtagcaaagcatgcctccgccatccacccaatgcgtgaagcggtcagagtagtcacgg 4317015

                                               
Query: 601     gagtctgagagctggctgcttgagcgggacag 632
                 |||||| |  |||||||||||||| |||||
Sbjct: 4317014 atgtctgacatttggctgcttgagcgtgacag 4316983



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 69/85 (81%)
 Strand = Plus / Minus

                                                                           
Query: 644     cctcatcattgtgtcctggctcactgtaagtagtagtagatccaacactgataccatcca 703
               ||||||||||||||||  | |||||||| |  ||||| ||| ||| ||||| | ||||||
Sbjct: 4316416 cctcatcattgtgtccctgttcactgtatgatgtagttgattcaatactgacaacatcca 4316357

                                        
Query: 704     atggtgagtgaatgagtgatgacct 728
                 ||||| |  ||||||||||||||
Sbjct: 4316356 tgggtgaattgatgagtgatgacct 4316332

>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                          
Query: 541    tagtagcaaagcatgcctccattagccacccactgagcaaagcggtcagaatagtcgcgc 600
              ||||||||||||||||||||   | ||||||| || |  ||||||||||| ||||| || 
Sbjct: 109423 tagtagcaaagcatgcctccgccatccacccaatgcgtgaagcggtcagagtagtcacgg 109482

                                              
Query: 601    gagtctgagagctggctgcttgagcgggacag 632
                |||||| |  |||||||||||||| |||||
Sbjct: 109483 atgtctgacatttggctgcttgagcgtgacag 109514



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                          
Query: 644    cctcatcattgtgtcctggctcactgtaagtagtagtagatccaacactgataccatcca 703
              ||||||||||||||||  | |||||||| |  ||||| ||| ||| ||||| | ||||||
Sbjct: 110081 cctcatcattgtgtccctgttcactgtatgatgtagttgattcaatactgacaacatcca 110140

                                       
Query: 704    atggtgagtgaatgagtgatgacct 728
                ||||| |  ||||||||||||||
Sbjct: 110141 tgggtgaattgatgagtgatgacct 110165

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                           
Query: 541     tagtagcaaagcatgcctccattagccacccactgagcaaagcggtcagaatagtcgcgc 600
               ||||||||||||||||||||   | ||||||| || |  ||||||||||| ||||| || 
Sbjct: 4317189 tagtagcaaagcatgcctccgccatccacccaatgcgtgaagcggtcagagtagtcacgg 4317130

                                               
Query: 601     gagtctgagagctggctgcttgagcgggacag 632
                 |||||| |  |||||||||||||| |||||
Sbjct: 4317129 atgtctgacatttggctgcttgagcgtgacag 4317098



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 69/85 (81%)
 Strand = Plus / Minus

                                                                           
Query: 644     cctcatcattgtgtcctggctcactgtaagtagtagtagatccaacactgataccatcca 703
               ||||||||||||||||  | |||||||| |  ||||| ||| ||| ||||| | ||||||
Sbjct: 4316531 cctcatcattgtgtccctgttcactgtatgatgtagttgattcaatactgacaacatcca 4316472

                                        
Query: 704     atggtgagtgaatgagtgatgacct 728
                 ||||| |  ||||||||||||||
Sbjct: 4316471 tgggtgaattgatgagtgatgacct 4316447

>gb|AC139131.19| Mus musculus chromosome 7, clone RP23-301N20, complete sequence
          Length = 230772

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 509    tggagatgccaccaggacaaatt 531
              |||||||||||||||||||||||
Sbjct: 188892 tggagatgccaccaggacaaatt 188914

>gb|AC114404.12| Mus musculus chromosome 7, clone RP24-350D24, complete sequence
          Length = 188585

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 509   tggagatgccaccaggacaaatt 531
             |||||||||||||||||||||||
Sbjct: 17060 tggagatgccaccaggacaaatt 17082

>gb|AY112497.1| Zea mays CL422_1 mRNA sequence
          Length = 801

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 633 gtcatcccttccctcatcattgtgtcctggctcactgta 671
           ||||||||||||||||||| | || ||| ||||||||||
Sbjct: 173 gtcatcccttccctcatcagtatgcccttgctcactgta 135

>ref|NM_017514.2| Homo sapiens plexin A3 (PLXNA3), mRNA
          Length = 6762

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 426  gcactgtgcggctgcagcttct 447
            ||||||||||||||||||||||
Sbjct: 2010 gcactgtgcggctgcagcttct 2031

>emb|BX936365.3| Human DNA sequence from clone WI2-81657B9 on chromosome X Contains the
             3' end of the GDI1 gene for GDP dissociation inhibitor 1,
             the FAM50A gene for family with sequence similarity 50,
             member A, a novel gene (DXS9879E) gene , the PLXNA3 gene
             for plexin A3 and a CpG island, complete sequence
          Length = 39835

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 426   gcactgtgcggctgcagcttct 447
             ||||||||||||||||||||||
Sbjct: 22403 gcactgtgcggctgcagcttct 22424

>emb|X87852.1|HSSEXGENE H.sapiens mRNA for SEX gene
          Length = 6039

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 426  gcactgtgcggctgcagcttct 447
            ||||||||||||||||||||||
Sbjct: 2022 gcactgtgcggctgcagcttct 2043

>gb|L44140.1|HUMFLNG6PD Homo sapiens chromosome X region from filamin (FLN) gene to
              glucose-6-phosphate dehydrogenase (G6PD) gene, complete
              cds's
          Length = 219447

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 426    gcactgtgcggctgcagcttct 447
              ||||||||||||||||||||||
Sbjct: 134840 gcactgtgcggctgcagcttct 134861

>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032N04, from chromosome 10, complete sequence
          Length = 159445

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    atatcctgtgttacaaacata 48
             |||||||||||||||||||||
Sbjct: 98481 atatcctgtgttacaaacata 98461

>dbj|AK091340.1| Homo sapiens cDNA FLJ34021 fis, clone FCBBF2002928
          Length = 2434

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 242  atcattcattgcctttccctt 262
            |||||||||||||||||||||
Sbjct: 1251 atcattcattgcctttccctt 1231

>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0019N10, from chromosome 10, complete sequence
          Length = 192267

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     atatcctgtgttacaaacata 48
              |||||||||||||||||||||
Sbjct: 133899 atatcctgtgttacaaacata 133919

>tpg|BK001426.1| TPA: TPA_exp: Homo sapiens selenoprotein I mRNA, complete cds
          Length = 8084

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 242  atcattcattgcctttccctt 262
            |||||||||||||||||||||
Sbjct: 6899 atcattcattgcctttccctt 6879

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 28       atatcctgtgttacaaacata 48
                |||||||||||||||||||||
Sbjct: 11780420 atatcctgtgttacaaacata 11780400

>ref|NM_033505.1| Homo sapiens selenoprotein I (SELI), mRNA
          Length = 8091

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 242  atcattcattgcctttccctt 262
            |||||||||||||||||||||
Sbjct: 6908 atcattcattgcctttccctt 6888

>gb|AC010896.15| Homo sapiens BAC clone RP11-499P9 from 2, complete sequence
          Length = 188780

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 242    atcattcattgcctttccctt 262
              |||||||||||||||||||||
Sbjct: 165039 atcattcattgcctttccctt 165019

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 28       atatcctgtgttacaaacata 48
                |||||||||||||||||||||
Sbjct: 11787760 atatcctgtgttacaaacata 11787740

>dbj|AB051511.1| Homo sapiens mRNA for KIAA1724 protein, partial cds
          Length = 8082

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 242  atcattcattgcctttccctt 262
            |||||||||||||||||||||
Sbjct: 6899 atcattcattgcctttccctt 6879


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,797,711
Number of Sequences: 3902068
Number of extensions: 7797711
Number of successful extensions: 175559
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 175319
Number of HSP's gapped (non-prelim): 235
length of query: 731
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 708
effective length of database: 17,143,297,704
effective search space: 12137454774432
effective search space used: 12137454774432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)