ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah60c22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK111792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 462 e-127
2dbj|AK111521.1| Oryza sativa (japonica cultivar-group) cDNA clon... 454 e-124
3gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retro... 222 1e-54
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 153 8e-34
5emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa... 153 8e-34
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 151 3e-33
7emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112... 151 3e-33
8gb|AY087609.1| Arabidopsis thaliana clone 37028 mRNA, complete s... 68 4e-08
9ref|NM_100804.2| Arabidopsis thaliana unknown protein AT1G09340 ... 64 6e-07
10gb|AY070022.1| Arabidopsis thaliana putative RNA-binding protein... 64 6e-07
11gb|AY035050.1| Arabidopsis thaliana putative RNA-binding protein... 64 6e-07
12gb|AY062570.1| Arabidopsis thaliana g5bf protein (At1g09340; T31... 64 6e-07
13gb|AF428282.1|AF428282 Arabidopsis thaliana At1g09340/T31J12_6 m... 64 6e-07
14gb|AF325043.2|AF325043 Arabidopsis thaliana At1g09340 (At1g09340... 64 6e-07
15emb|BX815511.1|CNS0ABD7 Arabidopsis thaliana Full-length cDNA Co... 64 6e-07
16emb|BX831023.1|CNS09ZFQ Arabidopsis thaliana Full-length cDNA Co... 64 6e-07
17emb|Y15382.1|ATRNABIND Arabidopsis thaliana mRNA for putative RN... 64 6e-07
18emb|Y10557.1|AT55BF Arabidopsis thaliana g5bf mRNA 64 6e-07
19emb|BX815653.1|CNS0ABJP Arabidopsis thaliana Full-length cDNA Co... 60 9e-06
20emb|BX815609.1|CNS0ABEP Arabidopsis thaliana Full-length cDNA Co... 60 9e-06
21gb|DQ226766.1| Boechera divaricarpa isolate SLW-D-C04 mRNA sequence 54 6e-04
22gb|AY177617.1| Chlamydomonas reinhardtii 38 kDa ribosome-associa... 46 0.14
23dbj|AP006378.1| Lotus japonicus genomic DNA, chromosome 1, clone... 46 0.14
24gb|AC159288.4| Mus musculus BAC clone RP23-300L21 from chromosom... 44 0.56
25gb|AC103405.14| Mus musculus chromosome 19, clone RP23-98J4, com... 42 2.2
26gb|AC102751.14| Mus musculus chromosome 19, clone RP24-531N3, co... 42 2.2
27gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome 42 2.2
28gb|AC018907.5|ATAC018907 Arabidopsis thaliana chromosome III BAC... 42 2.2
29emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segmen... 42 2.2
30gb|AC007784.7| Homo sapiens 12p13 BAC RPCI11-1092P21 (Roswell Pa... 42 2.2
31emb|BX470204.13| Zebrafish DNA sequence from clone CH211-63C23 i... 42 2.2
32dbj|AK086872.1| Mus musculus 0 day neonate lung cDNA, RIKEN full... 42 2.2
33gb|AC068073.1|AC068073 Arabidopsis thaliana chromosome 3 BAC F24... 42 2.2
34gb|AC104516.2| Drosophila melanogaster clone BACR20O17, complete... 40 8.7
35gb|AC136730.9| Mus musculus chromosome 19, clone RP23-76E22, com... 40 8.7
36ref|XM_460516.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 8.7
37gb|AC148334.3| Mus musculus BAC clone RP23-213L20 from chromosom... 40 8.7
38ref|NM_173354.2| Homo sapiens SNF1-like kinase (SNF1LK), mRNA 40 8.7
39ref|XM_746470.1| Aspergillus fumigatus Af293 GATA transcription ... 40 8.7
40ref|XM_390273.1| Gibberella zeae PH-1 chromosome 1 GGPP_GIBFU Ge... 40 8.7
41ref|XM_548144.2| PREDICTED: Canis familiaris similar to MLN 64 p... 40 8.7
42ref|XM_846381.1| PREDICTED: Canis familiaris similar to MLN 64 p... 40 8.7
43ref|XM_858705.1| PREDICTED: Canis familiaris similar to MLN 64 p... 40 8.7
44ref|XM_858684.1| PREDICTED: Canis familiaris similar to MLN 64 p... 40 8.7
45ref|XM_858659.1| PREDICTED: Canis familiaris similar to MLN 64 p... 40 8.7
46gb|AC112521.4| Mus musculus BAC clone RP23-186C6 from 9, complet... 40 8.7
47gb|AC163221.4| Mus musculus chromosome 19, clone RP23-376A6, com... 40 8.7
48emb|AL135844.9| Human DNA sequence from clone RP5-1154G13 on chr... 40 8.7
49emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 40 8.7
50gb|BC038504.1| Homo sapiens SNF1-like kinase, mRNA (cDNA clone M... 40 8.7
51gb|AC163890.2| Glomus intraradices clone JGIATSX-5N24, complete ... 40 8.7
52gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell... 40 8.7
53gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell... 40 8.7
54gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 8.7
55gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 8.7
56gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 8.7
57gb|AC146911.11| Mus musculus chromosome 15, clone RP24-326O2, co... 40 8.7
58gb|U69730.1| Homo sapiens Xp22 Cosmids U98B4 and U24F2 (Lawrence... 40 8.7
59dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
60gb|AC084882.2|AC084882 Homo sapiens chromosome 15 clone RP11-408... 40 8.7
61gb|AC023905.6|AC023905 Homo sapiens chromosome 15 clone CTD-2050... 40 8.7
62dbj|AB047786.1| Homo sapiens SNF1LK mRNA for serine/threonine pr... 40 8.7
63dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 8.7
64dbj|AP005586.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
65emb|BX005057.8| Zebrafish DNA sequence from clone DKEY-12L12 in ... 40 8.7
66dbj|AK131076.1| Homo sapiens mRNA for FLJ00263 protein 40 8.7
67emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 40 8.7
68gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71... 40 8.7
69gb|AE003510.5| Drosophila melanogaster chromosome X, section 62 ... 40 8.7
70dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.7
71dbj|D15050.1|HUMAREB6 Homo sapiens mRNA for transcription factor... 40 8.7
72emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 8.7
73gb|AC147637.3| Mus musculus BAC clone RP23-205M20 from 9, comple... 40 8.7
74dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 8.7 
>dbj|AK111792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099N07, full
           insert sequence
          Length = 852

 Score =  462 bits (233), Expect = e-127
 Identities = 407/465 (87%)
 Strand = Plus / Minus

                                                                       
Query: 176 ctcagacgctcacgagcttcttgccgaggatcatgtcgtccgtggtgaagtcagcctcct 235
           |||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||
Sbjct: 597 ctcagacgctgacgagcttcttgccgaggatcatgtcgtcggtggtgaagtcggccgcct 538

                                                                       
Query: 236 ttctgaaggtcccgcggccgaagtcgaggttgtacgagtccgtcaagccgtcgaggaggt 295
           | ||||| || ||||||||||||||||||||||||||||| || | ||| || |  ||||
Sbjct: 537 tcctgaacgtgccgcggccgaagtcgaggttgtacgagtcggtgaggccctccaccaggt 478

                                                                       
Query: 296 cgtactccggcgtaaccccgaggtccttgctggccttctccacagacgcgaagaaatgct 355
           ||||||||||| |   |||||| |||  | | |||||||| |  ||||||||||||||||
Sbjct: 477 cgtactccggcttccacccgagctccaaggtcgccttctcgattgacgcgaagaaatgct 418

                                                                       
Query: 356 ggtctctgaaggggaaggccttcttcttgccgaaatcgaagtccttggggttgtagtgga 415
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 417 ggtctctgaaggggaaggccttcttcttcccgaaatcgaagtccttggggttgtagtgga 358

                                                                       
Query: 416 tgatctccggctcagggaaccctccagcctttgcgcatgcccgtgctagcccatcgaagg 475
            |||||||||||| ||||| ||||||||||| ||||| ||||||||||| || |||||||
Sbjct: 357 cgatctccggctcggggaatcctccagccttggcgcacgcccgtgctagaccgtcgaagg 298

                                                                       
Query: 476 tgacatacttgctgccggagatgttgtacacctgcttgctcgccttggggttgccgagga 535
           |||| ||||||  ||||||||||||| ||||||||||||||||||| |||||||||||  
Sbjct: 297 tgacgtacttggcgccggagatgttgaacacctgcttgctcgccttcgggttgccgagcg 238

                                                                       
Query: 536 ccttgatgaaggccgtcgccaaatccttgacatggccgagctgggtgatctggttcccag 595
           ||   | ||| ||||||||||| |||||||||||||||||||||||||| ||||| || |
Sbjct: 237 ccagcacgaacgccgtcgccaagtccttgacatggccgagctgggtgatttggttgccgg 178

                                                        
Query: 596 cgttagggatggggatcgggcgaccagccttgagccggtggaaga 640
           |    ||||  ||||| ||||| ||||||||||||||||||||||
Sbjct: 177 caccggggacagggatggggcggccagccttgagccggtggaaga 133
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>dbj|AK111521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M10, full
            insert sequence
          Length = 1479

 Score =  454 bits (229), Expect = e-124
 Identities = 406/465 (87%)
 Strand = Plus / Minus

                                                                        
Query: 176  ctcagacgctcacgagcttcttgccgaggatcatgtcgtccgtggtgaagtcagcctcct 235
            |||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||
Sbjct: 1224 ctcagacgctgacgagcttcttgccgaggatcatgtcgtcggtggtgaagtcggccgcct 1165

                                                                        
Query: 236  ttctgaaggtcccgcggccgaagtcgaggttgtacgagtccgtcaagccgtcgaggaggt 295
            | ||||| || ||||||||||||||||||||||||||||| || | ||| || |  ||||
Sbjct: 1164 tcctgaacgtgccgcggccgaagtcgaggttgtacgagtcggtgaggccctccaccaggt 1105

                                                                        
Query: 296  cgtactccggcgtaaccccgaggtccttgctggccttctccacagacgcgaagaaatgct 355
            ||||||||||| |   |||||| |||  | | |||||||| |  ||||||||||||||| 
Sbjct: 1104 cgtactccggcttccacccgagctccaaggtcgccttctcgattgacgcgaagaaatgcc 1045

                                                                        
Query: 356  ggtctctgaaggggaaggccttcttcttgccgaaatcgaagtccttggggttgtagtgga 415
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1044 ggtctctgaaggggaaggccttcttcttcccgaaatcgaagtccttggggttgtagtgga 985

                                                                        
Query: 416  tgatctccggctcagggaaccctccagcctttgcgcatgcccgtgctagcccatcgaagg 475
             |||||||||||| ||||| ||||||||||| ||||| ||||||||||| || |||||||
Sbjct: 984  cgatctccggctcggggaatcctccagccttggcgcacgcccgtgctagaccgtcgaagg 925

                                                                        
Query: 476  tgacatacttgctgccggagatgttgtacacctgcttgctcgccttggggttgccgagga 535
            |||| ||||||  ||||||||||||| ||||||||||||||||||| |||||||||||  
Sbjct: 924  tgacgtacttggcgccggagatgttgaacacctgcttgctcgccttcgggttgccgagcg 865

                                                                        
Query: 536  ccttgatgaaggccgtcgccaaatccttgacatggccgagctgggtgatctggttcccag 595
            ||   | ||| ||||||||||| |||||||||||||||||||||||||| ||||| || |
Sbjct: 864  ccagcacgaacgccgtcgccaagtccttgacatggccgagctgggtgatttggttgccgg 805

                                                         
Query: 596  cgttagggatggggatcgggcgaccagccttgagccggtggaaga 640
            |    ||||  ||||| ||||| ||||||||||||||||||||||
Sbjct: 804  caccggggacagggatggggcggccagccttgagccggtggaaga 760
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>gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retrotransposon grande1,
             xilon1 retrotransposon, helitron B73_14578, gypsy
             retrotransposon huck1 and ruda retrotransposon, complete
             sequence
          Length = 152384

 Score =  222 bits (112), Expect = 1e-54
 Identities = 163/180 (90%)
 Strand = Plus / Plus

                                                                         
Query: 354   ctggtctctgaaggggaaggccttcttcttgccgaaatcgaagtccttggggttgtagtg 413
             |||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct: 20424 ctggtctctgaatgggaaggccttcttctttccgaagtcgaattccttggggttgtagtg 20483

                                                                         
Query: 414   gatgatctccggctcagggaaccctccagcctttgcgcatgcccgtgctagcccatcgaa 473
             || || ||||||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 20484 gacgagctccggctcagggaaccctccagcctttgcgcatgcccgcgcaaggccgtcgaa 20543

                                                                         
Query: 474   ggtgacatacttgctgccggagatgttgtacacctgcttgctcgccttggggttgccgag 533
             |||||||||||||   |||||||||||| | | ||||||||||||||||||||| |||||
Sbjct: 20544 ggtgacatacttggccccggagatgttgaagatctgcttgctcgccttggggttcccgag 20603



 Score =  113 bits (57), Expect = 7e-22
 Identities = 78/85 (91%)
 Strand = Plus / Plus

                                                                         
Query: 190   agcttcttgccgaggatcatgtcgtccgtggtgaagtcagcctcctttctgaaggtcccg 249
             ||||||||| |||||||||||||||| ||||||||||| |||||||| | ||| || |||
Sbjct: 20181 agcttcttgtcgaggatcatgtcgtctgtggtgaagtccgcctccttccggaacgtgccg 20240

                                      
Query: 250   cggccgaagtcgaggttgtacgagt 274
             |||||||||||||||||||||||||
Sbjct: 20241 cggccgaagtcgaggttgtacgagt 20265



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                         
Query: 560   ccttgacatggccgagctgggtgatctggttcccagcgttagggatggggatcgggcgac 619
             ||||||||||||||||||| ||||||||||| || |||   ||||||||||| ||||| |
Sbjct: 20708 ccttgacatggccgagctgcgtgatctggttgccggcgccggggatggggatggggcggc 20767

                                
Query: 620   cagccttgagccggtggaa 638
             | |||||||| ||||||||
Sbjct: 20768 cggccttgaggcggtggaa 20786
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  153 bits (77), Expect = 8e-34
 Identities = 155/181 (85%)
 Strand = Plus / Minus

                                                                            
Query: 176      ctcagacgctcacgagcttcttgccgaggatcatgtcgtccgtggtgaagtcagcctcct 235
                |||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||
Sbjct: 13150345 ctcagacgctgacgagcttcttgccgaggatcatgtcgtcggtggtgaagtcggccgcct 13150286

                                                                            
Query: 236      ttctgaaggtcccgcggccgaagtcgaggttgtacgagtccgtcaagccgtcgaggaggt 295
                | ||||| || ||||||||||||||||||||||||||||| || | ||| || |  ||||
Sbjct: 13150285 tcctgaacgtgccgcggccgaagtcgaggttgtacgagtcggtgaggccctccaccaggt 13150226

                                                                            
Query: 296      cgtactccggcgtaaccccgaggtccttgctggccttctccacagacgcgaagaaatgct 355
                ||||||||||| |   |||||| |||  | | |||||||| |  ||||||||||||||||
Sbjct: 13150225 cgtactccggcttccacccgagctccaaggtcgccttctcgattgacgcgaagaaatgct 13150166

                 
Query: 356      g 356
                |
Sbjct: 13150165 g 13150165



 Score =  151 bits (76), Expect = 3e-33
 Identities = 88/92 (95%)
 Strand = Plus / Minus

                                                                            
Query: 354      ctggtctctgaaggggaaggccttcttcttgccgaaatcgaagtccttggggttgtagtg 413
                |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 13150061 ctggtctctgaaggggaaggccttcttcttcccgaaatcgaagtccttggggttgtagtg 13150002

                                                
Query: 414      gatgatctccggctcagggaaccctccagcct 445
                || |||||||||||| ||||| ||||||||||
Sbjct: 13150001 gacgatctccggctcggggaatcctccagcct 13149970



 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                            
Query: 443      cctttgcgcatgcccgtgctagcccatcgaaggtgacatacttgctgccggagatgttgt 502
                |||| ||||| ||||||||||| || ||||||||||| ||||||  ||||||||||||| 
Sbjct: 13149873 ccttggcgcacgcccgtgctagaccgtcgaaggtgacgtacttggcgccggagatgttga 13149814

                                               
Query: 503      acacctgcttgctcgccttggggttgccgag 533
                ||||||||||||||||||| |||||||||||
Sbjct: 13149813 acacctgcttgctcgccttcgggttgccgag 13149783



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                            
Query: 560      ccttgacatggccgagctgggtgatctggttcccagcgttagggatggggatcgggcgac 619
                ||||||||||||||||||||||||| ||||| || ||    ||||  ||||| ||||| |
Sbjct: 13149664 ccttgacatggccgagctgggtgatttggttgccggcaccggggacagggatggggcggc 13149605

                                     
Query: 620      cagccttgagccggtggaaga 640
                |||||||||||||||||||||
Sbjct: 13149604 cagccttgagccggtggaaga 13149584
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>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 178827

 Score =  153 bits (77), Expect = 8e-34
 Identities = 155/181 (85%)
 Strand = Plus / Minus

                                                                          
Query: 176    ctcagacgctcacgagcttcttgccgaggatcatgtcgtccgtggtgaagtcagcctcct 235
              |||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||
Sbjct: 139548 ctcagacgctgacgagcttcttgccgaggatcatgtcgtcggtggtgaagtcggccgcct 139489

                                                                          
Query: 236    ttctgaaggtcccgcggccgaagtcgaggttgtacgagtccgtcaagccgtcgaggaggt 295
              | ||||| || ||||||||||||||||||||||||||||| || | ||| || |  ||||
Sbjct: 139488 tcctgaacgtgccgcggccgaagtcgaggttgtacgagtcggtgaggccctccaccaggt 139429

                                                                          
Query: 296    cgtactccggcgtaaccccgaggtccttgctggccttctccacagacgcgaagaaatgct 355
              ||||||||||| |   |||||| |||  | | |||||||| |  ||||||||||||||||
Sbjct: 139428 cgtactccggcttccacccgagctccaaggtcgccttctcgattgacgcgaagaaatgct 139369

               
Query: 356    g 356
              |
Sbjct: 139368 g 139368



 Score =  151 bits (76), Expect = 3e-33
 Identities = 88/92 (95%)
 Strand = Plus / Minus

                                                                          
Query: 354    ctggtctctgaaggggaaggccttcttcttgccgaaatcgaagtccttggggttgtagtg 413
              |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 139264 ctggtctctgaaggggaaggccttcttcttcccgaaatcgaagtccttggggttgtagtg 139205

                                              
Query: 414    gatgatctccggctcagggaaccctccagcct 445
              || |||||||||||| ||||| ||||||||||
Sbjct: 139204 gacgatctccggctcggggaatcctccagcct 139173



 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                          
Query: 443    cctttgcgcatgcccgtgctagcccatcgaaggtgacatacttgctgccggagatgttgt 502
              |||| ||||| ||||||||||| || ||||||||||| ||||||  ||||||||||||| 
Sbjct: 139076 ccttggcgcacgcccgtgctagaccgtcgaaggtgacgtacttggcgccggagatgttga 139017

                                             
Query: 503    acacctgcttgctcgccttggggttgccgag 533
              ||||||||||||||||||| |||||||||||
Sbjct: 139016 acacctgcttgctcgccttcgggttgccgag 138986



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                          
Query: 560    ccttgacatggccgagctgggtgatctggttcccagcgttagggatggggatcgggcgac 619
              ||||||||||||||||||||||||| ||||| || ||    ||||  ||||| ||||| |
Sbjct: 138867 ccttgacatggccgagctgggtgatttggttgccggcaccggggacagggatggggcggc 138808

                                   
Query: 620    cagccttgagccggtggaaga 640
              |||||||||||||||||||||
Sbjct: 138807 cagccttgagccggtggaaga 138787
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  151 bits (76), Expect = 3e-33
 Identities = 88/92 (95%)
 Strand = Plus / Minus

                                                                            
Query: 354      ctggtctctgaaggggaaggccttcttcttgccgaaatcgaagtccttggggttgtagtg 413
                |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 13104334 ctggtctctgaaggggaaggccttcttcttcccgaaatcgaagtccttggggttgtagtg 13104275

                                                
Query: 414      gatgatctccggctcagggaaccctccagcct 445
                || |||||||||||| ||||| ||||||||||
Sbjct: 13104274 gacgatctccggctcggggaatcctccagcct 13104243



 Score =  143 bits (72), Expect = 8e-31
 Identities = 93/100 (93%)
 Strand = Plus / Minus

                                                                            
Query: 176      ctcagacgctcacgagcttcttgccgaggatcatgtcgtccgtggtgaagtcagcctcct 235
                |||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||
Sbjct: 13104619 ctcagacgctgacgagcttcttgccgaggatcatgtcgtcggtggtgaagtcggccgcct 13104560

                                                        
Query: 236      ttctgaaggtcccgcggccgaagtcgaggttgtacgagtc 275
                | ||||| || |||||||||||||||||||||||||||||
Sbjct: 13104559 tcctgaacgtgccgcggccgaagtcgaggttgtacgagtc 13104520



 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                            
Query: 443      cctttgcgcatgcccgtgctagcccatcgaaggtgacatacttgctgccggagatgttgt 502
                |||| ||||| ||||||||||| || ||||||||||| ||||||  ||||||||||||| 
Sbjct: 13104146 ccttggcgcacgcccgtgctagaccgtcgaaggtgacgtacttggcgccggagatgttga 13104087

                                               
Query: 503      acacctgcttgctcgccttggggttgccgag 533
                ||||||||||||||||||| |||||||||||
Sbjct: 13104086 acacctgcttgctcgccttcgggttgccgag 13104056



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                            
Query: 560      ccttgacatggccgagctgggtgatctggttcccagcgttagggatggggatcgggcgac 619
                ||||||||||||||||||||||||| ||||| || ||    ||||  ||||| ||||| |
Sbjct: 13103937 ccttgacatggccgagctgggtgatttggttgccggcaccggggacagggatggggcggc 13103878

                                     
Query: 620      cagccttgagccggtggaaga 640
                |||||||||||||||||||||
Sbjct: 13103877 cagccttgagccggtggaaga 13103857
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>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 193499

 Score =  151 bits (76), Expect = 3e-33
 Identities = 88/92 (95%)
 Strand = Plus / Plus

                                                                          
Query: 354    ctggtctctgaaggggaaggccttcttcttgccgaaatcgaagtccttggggttgtagtg 413
              |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 180683 ctggtctctgaaggggaaggccttcttcttcccgaaatcgaagtccttggggttgtagtg 180742

                                              
Query: 414    gatgatctccggctcagggaaccctccagcct 445
              || |||||||||||| ||||| ||||||||||
Sbjct: 180743 gacgatctccggctcggggaatcctccagcct 180774



 Score =  143 bits (72), Expect = 8e-31
 Identities = 93/100 (93%)
 Strand = Plus / Plus

                                                                          
Query: 176    ctcagacgctcacgagcttcttgccgaggatcatgtcgtccgtggtgaagtcagcctcct 235
              |||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||
Sbjct: 180398 ctcagacgctgacgagcttcttgccgaggatcatgtcgtcggtggtgaagtcggccgcct 180457

                                                      
Query: 236    ttctgaaggtcccgcggccgaagtcgaggttgtacgagtc 275
              | ||||| || |||||||||||||||||||||||||||||
Sbjct: 180458 tcctgaacgtgccgcggccgaagtcgaggttgtacgagtc 180497



 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                          
Query: 443    cctttgcgcatgcccgtgctagcccatcgaaggtgacatacttgctgccggagatgttgt 502
              |||| ||||| ||||||||||| || ||||||||||| ||||||  ||||||||||||| 
Sbjct: 180871 ccttggcgcacgcccgtgctagaccgtcgaaggtgacgtacttggcgccggagatgttga 180930

                                             
Query: 503    acacctgcttgctcgccttggggttgccgag 533
              ||||||||||||||||||| |||||||||||
Sbjct: 180931 acacctgcttgctcgccttcgggttgccgag 180961



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                          
Query: 560    ccttgacatggccgagctgggtgatctggttcccagcgttagggatggggatcgggcgac 619
              ||||||||||||||||||||||||| ||||| || ||    ||||  ||||| ||||| |
Sbjct: 181080 ccttgacatggccgagctgggtgatttggttgccggcaccggggacagggatggggcggc 181139

                                   
Query: 620    cagccttgagccggtggaaga 640
              |||||||||||||||||||||
Sbjct: 181140 cagccttgagccggtggaaga 181160
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>gb|AY087609.1| Arabidopsis thaliana clone 37028 mRNA, complete sequence
          Length = 1337

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                        
Query: 331  ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
            |||||||| || || ||||||||||| || | ||| ||||| ||||||||||| || || 
Sbjct: 1071 ttctccaccgatgcaaagaaatgctgatcacggaaagggaatgccttcttcttcccaaag 1012

                                                                        
Query: 391  tcgaagtccttggggttgtagtggatgatctccggctcagggaaccctccagcctttgcg 450
            ||||| || || |||||||| || |  ||||| ||||| || ||||| || |||||||||
Sbjct: 1011 tcgaactctttcgggttgtaatgaacaatctctggctccggaaacccaccggcctttgcg 952

                                            
Query: 451  catgcccgtgctagcccatcgaaggtgacata 482
            || ||   ||||| |||||| ||||| |||||
Sbjct: 951  caagcttktgctaacccatcaaaggtaacata 920
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>ref|NM_100804.2| Arabidopsis thaliana unknown protein AT1G09340 mRNA, complete cds
          Length = 1423

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                        
Query: 331  ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
            |||||||| || || ||||||||||| || | ||| ||||| ||||||||||| || || 
Sbjct: 1070 ttctccaccgatgcaaagaaatgctgatcacggaaagggaatgccttcttcttcccaaag 1011

                                                                        
Query: 391  tcgaagtccttggggttgtagtggatgatctccggctcagggaaccctccagcctttgcg 450
            ||||| || || |||||||| || |  ||||| ||||| || ||||| || |||||||||
Sbjct: 1010 tcgaactctttcgggttgtaatgaacaatctctggctccggaaacccaccggcctttgcg 951

                                            
Query: 451  catgcccgtgctagcccatcgaaggtgacata 482
            || ||   ||||| |||||| ||||| |||||
Sbjct: 950  caagcttttgctaacccatcaaaggtaacata 919
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>gb|AY070022.1| Arabidopsis thaliana putative RNA-binding protein (At1g09340) mRNA,
           complete cds
          Length = 1168

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                       
Query: 331 ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
           |||||||| || || ||||||||||| || | ||| ||||| ||||||||||| || || 
Sbjct: 983 ttctccaccgatgcaaagaaatgctgatcacggaaagggaatgccttcttcttcccaaag 924

                                                                       
Query: 391 tcgaagtccttggggttgtagtggatgatctccggctcagggaaccctccagcctttgcg 450
           ||||| || || |||||||| || |  ||||| ||||| || ||||| || |||||||||
Sbjct: 923 tcgaactctttcgggttgtaatgaacaatctctggctccggaaacccaccggcctttgcg 864

                                           
Query: 451 catgcccgtgctagcccatcgaaggtgacata 482
           || ||   ||||| |||||| ||||| |||||
Sbjct: 863 caagcttttgctaacccatcaaaggtaacata 832
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>gb|AY035050.1| Arabidopsis thaliana putative RNA-binding protein (At1g09340) mRNA,
            complete cds
          Length = 1448

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                        
Query: 331  ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
            |||||||| || || ||||||||||| || | ||| ||||| ||||||||||| || || 
Sbjct: 1057 ttctccaccgatgcaaagaaatgctgatcacggaaagggaatgccttcttcttcccaaag 998

                                                                        
Query: 391  tcgaagtccttggggttgtagtggatgatctccggctcagggaaccctccagcctttgcg 450
            ||||| || || |||||||| || |  ||||| ||||| || ||||| || |||||||||
Sbjct: 997  tcgaactctttcgggttgtaatgaacaatctctggctccggaaacccaccggcctttgcg 938

                                            
Query: 451  catgcccgtgctagcccatcgaaggtgacata 482
            || ||   ||||| |||||| ||||| |||||
Sbjct: 937  caagcttttgctaacccatcaaaggtaacata 906
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>gb|AY062570.1| Arabidopsis thaliana g5bf protein (At1g09340; T31J12.6) mRNA,
           complete cds
          Length = 1228

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                       
Query: 331 ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
           |||||||| || || ||||||||||| || | ||| ||||| ||||||||||| || || 
Sbjct: 995 ttctccaccgatgcaaagaaatgctgatcacggaaagggaatgccttcttcttcccaaag 936

                                                                       
Query: 391 tcgaagtccttggggttgtagtggatgatctccggctcagggaaccctccagcctttgcg 450
           ||||| || || |||||||| || |  ||||| ||||| || ||||| || |||||||||
Sbjct: 935 tcgaactctttcgggttgtaatgaacaatctctggctccggaaacccaccggcctttgcg 876

                                           
Query: 451 catgcccgtgctagcccatcgaaggtgacata 482
           || ||   ||||| |||||| ||||| |||||
Sbjct: 875 caagcttttgctaacccatcaaaggtaacata 844
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>gb|AF428282.1|AF428282 Arabidopsis thaliana At1g09340/T31J12_6 mRNA, complete cds
          Length = 1234

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                        
Query: 331  ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
            |||||||| || || ||||||||||| || | ||| ||||| ||||||||||| || || 
Sbjct: 1000 ttctccaccgatgcaaagaaatgctgatcacggaaagggaatgccttcttcttcccaaag 941

                                                                        
Query: 391  tcgaagtccttggggttgtagtggatgatctccggctcagggaaccctccagcctttgcg 450
            ||||| || || |||||||| || |  ||||| ||||| || ||||| || |||||||||
Sbjct: 940  tcgaactctttcgggttgtaatgaacaatctctggctccggaaacccaccggcctttgcg 881

                                            
Query: 451  catgcccgtgctagcccatcgaaggtgacata 482
            || ||   ||||| |||||| ||||| |||||
Sbjct: 880  caagcttttgctaacccatcaaaggtaacata 849
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>gb|AF325043.2|AF325043 Arabidopsis thaliana At1g09340 (At1g09340/T31J12_6) mRNA, complete
           cds
          Length = 1310

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                       
Query: 331 ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
           |||||||| || || ||||||||||| || | ||| ||||| ||||||||||| || || 
Sbjct: 987 ttctccaccgatgcaaagaaatgctgatcacggaaagggaatgccttcttcttcccaaag 928

                                                                       
Query: 391 tcgaagtccttggggttgtagtggatgatctccggctcagggaaccctccagcctttgcg 450
           ||||| || || |||||||| || |  ||||| ||||| || ||||| || |||||||||
Sbjct: 927 tcgaactctttcgggttgtaatgaacaatctctggctccggaaacccaccggcctttgcg 868

                                           
Query: 451 catgcccgtgctagcccatcgaaggtgacata 482
           || ||   ||||| |||||| ||||| |||||
Sbjct: 867 caagcttttgctaacccatcaaaggtaacata 836
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>emb|BX815511.1|CNS0ABD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS69ZB12 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1245

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                        
Query: 331  ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
            |||||||| || || ||||||||||| || | ||| ||||| ||||||||||| || || 
Sbjct: 1046 ttctccaccgatgcaaagaaatgctgatcacggaaagggaatgccttcttcttcccaaag 987

                                                                        
Query: 391  tcgaagtccttggggttgtagtggatgatctccggctcagggaaccctccagcctttgcg 450
            ||||| || || |||||||| || |  ||||| ||||| || ||||| || |||||||||
Sbjct: 986  tcgaactctttcgggttgtaatgaacaatctctggctccggaaacccaccggcctttgcg 927

                                            
Query: 451  catgcccgtgctagcccatcgaaggtgacata 482
            || ||   ||||| |||||| ||||| |||||
Sbjct: 926  caagcttttgctaacccatcaaaggtaacata 895
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>emb|BX831023.1|CNS09ZFQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS4ZG05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1259

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                       
Query: 331 ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
           |||||||| || || ||||||||||| || | ||| ||||| ||||||||||| || || 
Sbjct: 981 ttctccaccgatgcaaagaaatgctgatcacggaaagggaatgccttcttcttcccaaag 922

                                                                       
Query: 391 tcgaagtccttggggttgtagtggatgatctccggctcagggaaccctccagcctttgcg 450
           ||||| || || |||||||| || |  ||||| ||||| || ||||| || |||||||||
Sbjct: 921 tcgaactctttcgggttgtaatgaacaatctctggctccggaaacccaccggcctttgcg 862

                                           
Query: 451 catgcccgtgctagcccatcgaaggtgacata 482
           || ||   ||||| |||||| ||||| |||||
Sbjct: 861 caagcttttgctaacccatcaaaggtaacata 830
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>emb|Y15382.1|ATRNABIND Arabidopsis thaliana mRNA for putative RNA binding protein
          Length = 1291

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                       
Query: 331 ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
           |||||||| || || ||||||||||| || | ||| ||||| ||||||||||| || || 
Sbjct: 999 ttctccaccgatgcaaagaaatgctgatcacggaaagggaatgccttcttcttcccaaag 940

                                                                       
Query: 391 tcgaagtccttggggttgtagtggatgatctccggctcagggaaccctccagcctttgcg 450
           ||||| || || |||||||| || |  ||||| ||||| || ||||| || |||||||||
Sbjct: 939 tcgaactctttcgggttgtaatgaacaatctctggctccggaaacccaccggcctttgcg 880

                                           
Query: 451 catgcccgtgctagcccatcgaaggtgacata 482
           || ||   ||||| |||||| ||||| |||||
Sbjct: 879 caagcttttgctaacccatcaaaggtaacata 848
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>emb|Y10557.1|AT55BF Arabidopsis thaliana g5bf mRNA
          Length = 1253

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                        
Query: 331  ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
            |||||||| || || ||||||||||| || | ||| ||||| ||||||||||| || || 
Sbjct: 1000 ttctccaccgatgcaaagaaatgctgatcacggaaagggaatgccttcttcttcccaaag 941

                                                                        
Query: 391  tcgaagtccttggggttgtagtggatgatctccggctcagggaaccctccagcctttgcg 450
            ||||| || || |||||||| || |  ||||| ||||| || ||||| || |||||||||
Sbjct: 940  tcgaactctttcgggttgtaatgaacaatctctggctccggaaacccaccggcctttgcg 881

                                            
Query: 451  catgcccgtgctagcccatcgaaggtgacata 482
            || ||   ||||| |||||| ||||| |||||
Sbjct: 880  caagcttttgctaacccatcaaaggtaacata 849
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>emb|BX815653.1|CNS0ABJP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS7ZH07 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1300

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 99/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 331  ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
            |||||||| || || ||||||||||| || | ||| ||||| ||||||||||| || || 
Sbjct: 1049 ttctccaccgatgcaaagaaatgctgatcacggaaagggaatgccttcttcttcccaaag 990

                                                                        
Query: 391  tcgaagtccttggggttgtagtggatgatctccggctcagggaaccctccagcctttgcg 450
            ||||| || || |||||||| || |  ||||| ||||| || ||||| || |||||||||
Sbjct: 989  tcgaactctttcgggttgtaatgaacaatctctggctccggaaacccaccggcctttgcg 930

              
Query: 451  ca 452
            ||
Sbjct: 929  ca 928
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>emb|BX815609.1|CNS0ABEP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS77ZE10 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1328

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 99/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 331  ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
            |||||||| || || ||||||||||| || | ||| ||||| ||||||||||| || || 
Sbjct: 1051 ttctccaccgatgcaaagaaatgctgatcacggaaagggaatgccttcttcttcccaaag 992

                                                                        
Query: 391  tcgaagtccttggggttgtagtggatgatctccggctcagggaaccctccagcctttgcg 450
            ||||| || || |||||||| || |  ||||| ||||| || ||||| || |||||||||
Sbjct: 991  tcgaactctttcgggttgtaatgaacaatctctggctccggaaacccaccggcctttgcg 932

              
Query: 451  ca 452
            ||
Sbjct: 931  ca 930
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>gb|DQ226766.1| Boechera divaricarpa isolate SLW-D-C04 mRNA sequence
          Length = 369

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 331 ttctccacagacgcgaagaaatgctggtctctgaaggggaaggccttcttcttgccgaaa 390
           |||||||| || || |||||||||||||| | ||| || || ||||||||||| || || 
Sbjct: 105 ttctccaccgatgcaaagaaatgctggtcacggaaaggaaatgccttcttcttcccaaag 46

                                  
Query: 391 tcgaagtccttggggttgtagtg 413
           ||||| || || |||||||||||
Sbjct: 45  tcgaactctttcgggttgtagtg 23
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>gb|AY177617.1| Chlamydomonas reinhardtii 38 kDa ribosome-associated protein
            precursor (Rap38) mRNA, complete cds; nuclear gene for
            chloroplast product
          Length = 1300

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 366  ggggaaggccttcttcttgccgaaatcgaagtccttggggttgtagtggat 416
            |||||||||||| | |||||| || || || ||||||| ||||||||||||
Sbjct: 1030 ggggaaggccttgtccttgccaaagtcaaactccttggcgttgtagtggat 980
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>dbj|AP006378.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44A10, TM0223,
             complete sequence
          Length = 101752

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 403   gggttgtagtggatgatctccggctcagggaaccctccagcct 445
             ||||||||||| |||||||| ||||| || ||||| |||||||
Sbjct: 41786 gggttgtagtgaatgatctctggctctggaaacccaccagcct 41828
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>gb|AC159288.4| Mus musculus BAC clone RP23-300L21 from chromosome 7, complete sequence
          Length = 201500

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 141    catgagccatgagccatgtgcc 162
              ||||||||||||||||||||||
Sbjct: 100681 catgagccatgagccatgtgcc 100660
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>gb|AC103405.14| Mus musculus chromosome 19, clone RP23-98J4, complete sequence
          Length = 227074

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   tgctggccttctccacagacg 343
             |||||||||||||||||||||
Sbjct: 22023 tgctggccttctccacagacg 22043
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>gb|AC102751.14| Mus musculus chromosome 19, clone RP24-531N3, complete sequence
          Length = 178150

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 323    tgctggccttctccacagacg 343
              |||||||||||||||||||||
Sbjct: 174772 tgctggccttctccacagacg 174792
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>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 526     ttgccgaggaccttgatgaag 546
               |||||||||||||||||||||
Sbjct: 1927029 ttgccgaggaccttgatgaag 1927049
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>gb|AC018907.5|ATAC018907 Arabidopsis thaliana chromosome III BAC F28L1 genomic sequence,
           complete sequence
          Length = 93478

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 184 ctcacgagcttcttgccgaggatcatgtc 212
           ||||||||||||||||| ||| |||||||
Sbjct: 121 ctcacgagcttcttgccaaggctcatgtc 149
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>emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segment 3/7
          Length = 347365

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 565   acatggccgagctgggtgatc 585
             |||||||||||||||||||||
Sbjct: 55932 acatggccgagctgggtgatc 55952
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>gb|AC007784.7| Homo sapiens 12p13 BAC RPCI11-1092P21 (Roswell Park Cancer Library Human
              BAC Library) complete sequence
          Length = 188364

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 317    ggtccttgctggccttctcca 337
              |||||||||||||||||||||
Sbjct: 180269 ggtccttgctggccttctcca 180249
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>emb|BX470204.13| Zebrafish DNA sequence from clone CH211-63C23 in linkage group 10,
              complete sequence
          Length = 185190

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 144    gagccatgagccatgtgcccatcca 168
              ||||||| |||||||||||||||||
Sbjct: 129414 gagccattagccatgtgcccatcca 129438
to top
>dbj|AK086872.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
            library, clone:E030007B21 product:unclassifiable, full
            insert sequence
          Length = 2098

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 323  tgctggccttctccacagacg 343
            |||||||||||||||||||||
Sbjct: 1848 tgctggccttctccacagacg 1868
to top
>gb|AC068073.1|AC068073 Arabidopsis thaliana chromosome 3 BAC F24F17 genomic sequence, complete
             sequence
          Length = 24745

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 184   ctcacgagcttcttgccgaggatcatgtc 212
             ||||||||||||||||| ||| |||||||
Sbjct: 19509 ctcacgagcttcttgccaaggctcatgtc 19537
to top
>gb|AC104516.2| Drosophila melanogaster clone BACR20O17, complete sequence
          Length = 174404

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   gccatgagccatgagccatg 158
             ||||||||||||||||||||
Sbjct: 97083 gccatgagccatgagccatg 97102



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   gccatgagccatgagccatg 158
             ||||||||||||||||||||
Sbjct: 97076 gccatgagccatgagccatg 97095
to top
>gb|AC136730.9| Mus musculus chromosome 19, clone RP23-76E22, complete sequence
          Length = 146616

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 111366 gccatgagccatgagccatg 111385
to top
>ref|XM_460516.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F03828g)
            partial mRNA
          Length = 1341

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 400  ttggggttgtagtggatgat 419
            ||||||||||||||||||||
Sbjct: 1042 ttggggttgtagtggatgat 1023
to top
>gb|AC148334.3| Mus musculus BAC clone RP23-213L20 from chromosome 13, complete sequence
          Length = 207106

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 436    cctccagcctttgcgcatgc 455
              ||||||||||||||||||||
Sbjct: 201053 cctccagcctttgcgcatgc 201034
to top
>ref|NM_173354.2| Homo sapiens SNF1-like kinase (SNF1LK), mRNA
          Length = 4723

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  gccatgagccatgagccatg 158
            ||||||||||||||||||||
Sbjct: 3402 gccatgagccatgagccatg 3383
to top
>ref|XM_746470.1| Aspergillus fumigatus Af293 GATA transcription factor LreB
           (Afu4g12690) partial mRNA
          Length = 1176

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 440 cagcctttgcgcatgcccgtgcta 463
           ||||||| ||||||||||||||||
Sbjct: 929 cagccttggcgcatgcccgtgcta 906
to top
>ref|XM_390273.1| Gibberella zeae PH-1 chromosome 1 GGPP_GIBFU Geranylgeranyl
            pyrophosphate synthetase (GGPP synthetase) (GGPPSASE)
            (Geranylgeranyl diphosphate synthase) (FG10097.1) partial
            mRNA
          Length = 1251

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 528  gccgaggaccttgatgaaggccgt 551
            |||||||| |||||||||||||||
Sbjct: 1177 gccgaggagcttgatgaaggccgt 1200
to top
>ref|XM_548144.2| PREDICTED: Canis familiaris similar to MLN 64 protein (StAR-related
           lipid transfer protein 3) (StARD3) (START
           domain-containing protein 3) (CAB1 protein), transcript
           variant 1 (LOC491024), mRNA
          Length = 1444

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 405 gttgtagtggatgatctccggctc 428
           ||||||||||||||||||| ||||
Sbjct: 375 gttgtagtggatgatctcctgctc 352
to top
>ref|XM_846381.1| PREDICTED: Canis familiaris similar to MLN 64 protein (StAR-related
           lipid transfer protein 3) (StARD3) (START
           domain-containing protein 3) (CAB1 protein), transcript
           variant 2 (LOC491024), mRNA
          Length = 1492

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 405 gttgtagtggatgatctccggctc 428
           ||||||||||||||||||| ||||
Sbjct: 423 gttgtagtggatgatctcctgctc 400
to top
>ref|XM_858705.1| PREDICTED: Canis familiaris similar to MLN 64 protein (StAR-related
           lipid transfer protein 3) (StARD3) (START
           domain-containing protein 3) (CAB1 protein), transcript
           variant 5 (LOC491024), mRNA
          Length = 1393

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 405 gttgtagtggatgatctccggctc 428
           ||||||||||||||||||| ||||
Sbjct: 423 gttgtagtggatgatctcctgctc 400
to top
>ref|XM_858684.1| PREDICTED: Canis familiaris similar to MLN 64 protein (StAR-related
           lipid transfer protein 3) (StARD3) (START
           domain-containing protein 3) (CAB1 protein), transcript
           variant 4 (LOC491024), mRNA
          Length = 1342

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 405 gttgtagtggatgatctccggctc 428
           ||||||||||||||||||| ||||
Sbjct: 372 gttgtagtggatgatctcctgctc 349
to top
>ref|XM_858659.1| PREDICTED: Canis familiaris similar to MLN 64 protein (StAR-related
           lipid transfer protein 3) (StARD3) (START
           domain-containing protein 3) (CAB1 protein), transcript
           variant 3 (LOC491024), mRNA
          Length = 1510

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 405 gttgtagtggatgatctccggctc 428
           ||||||||||||||||||| ||||
Sbjct: 423 gttgtagtggatgatctcctgctc 400
to top
>gb|AC112521.4| Mus musculus BAC clone RP23-186C6 from 9, complete sequence
          Length = 230334

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 484    ttgctgccggagatgttgta 503
              ||||||||||||||||||||
Sbjct: 103655 ttgctgccggagatgttgta 103674
to top
>gb|AC163221.4| Mus musculus chromosome 19, clone RP23-376A6, complete sequence
          Length = 188740

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 175862 gccatgagccatgagccatg 175881
to top
>emb|AL135844.9| Human DNA sequence from clone RP5-1154G13 on chromosome 20 Contains the
             3' end of the gene for a novel glycosyl hydrolase family
             47 protein, ESTs, STSs and GSSs, complete sequence
          Length = 37027

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   gccatgagccatgagccatg 158
             ||||||||||||||||||||
Sbjct: 33138 gccatgagccatgagccatg 33157
to top
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 400    ttggggttgtagtggatgat 419
              ||||||||||||||||||||
Sbjct: 317584 ttggggttgtagtggatgat 317603
to top
>gb|BC038504.1| Homo sapiens SNF1-like kinase, mRNA (cDNA clone MGC:33415
            IMAGE:4831049), complete cds
          Length = 4762

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  gccatgagccatgagccatg 158
            ||||||||||||||||||||
Sbjct: 3402 gccatgagccatgagccatg 3383
to top
>gb|AC163890.2| Glomus intraradices clone JGIATSX-5N24, complete sequence
          Length = 41409

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   gccatgagccatgagccatg 158
             ||||||||||||||||||||
Sbjct: 29124 gccatgagccatgagccatg 29105
to top
>gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 168652

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 139    gccatgagccatgagccatgtgcc 162
              ||||| ||||||||||||||||||
Sbjct: 137210 gccatcagccatgagccatgtgcc 137187
to top
>gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179283

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 139   gccatgagccatgagccatgtgcc 162
             ||||| ||||||||||||||||||
Sbjct: 12579 gccatcagccatgagccatgtgcc 12556
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     cagacgcgaagaaatgctgg 357
               ||||||||||||||||||||
Sbjct: 2672754 cagacgcgaagaaatgctgg 2672773
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     cttcttcttgccgaaatcga 394
               ||||||||||||||||||||
Sbjct: 1048207 cttcttcttgccgaaatcga 1048226
to top
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 177     tcagacgctcacgagcttct 196
               ||||||||||||||||||||
Sbjct: 1504315 tcagacgctcacgagcttct 1504296
to top
>gb|AC146911.11| Mus musculus chromosome 15, clone RP24-326O2, complete sequence
          Length = 194421

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   gccatgagccatgagccatg 158
             ||||||||||||||||||||
Sbjct: 58279 gccatgagccatgagccatg 58260
to top
>gb|U69730.1| Homo sapiens Xp22 Cosmids U98B4 and U24F2 (Lawrence Livermore human
             cosmid library) complete sequence
          Length = 64767

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   gccatgagccatgagccatg 158
             ||||||||||||||||||||
Sbjct: 42597 gccatgagccatgagccatg 42616
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     tccttgctggccttctccac 338
               ||||||||||||||||||||
Sbjct: 8266460 tccttgctggccttctccac 8266441
to top
>gb|AC084882.2|AC084882 Homo sapiens chromosome 15 clone RP11-408J6 map 15q21.1, complete
              sequence
          Length = 193804

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 428    cagggaaccctccagccttt 447
              ||||||||||||||||||||
Sbjct: 189562 cagggaaccctccagccttt 189581
to top
>gb|AC023905.6|AC023905 Homo sapiens chromosome 15 clone CTD-2050N2 map 15q21, complete
             sequence
          Length = 55367

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   cagggaaccctccagccttt 447
             ||||||||||||||||||||
Sbjct: 12082 cagggaaccctccagccttt 12101
to top
>dbj|AB047786.1| Homo sapiens SNF1LK mRNA for serine/threonine protein kinase,
            complete cds
          Length = 4706

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  gccatgagccatgagccatg 158
            ||||||||||||||||||||
Sbjct: 3396 gccatgagccatgagccatg 3377
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 572     cgagctgggtgatctggttc 591
               ||||||||||||||||||||
Sbjct: 4798695 cgagctgggtgatctggttc 4798714
to top
>dbj|AP005586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0450F09
          Length = 148752

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   tccttgctggccttctccac 338
             ||||||||||||||||||||
Sbjct: 90382 tccttgctggccttctccac 90363
to top
>emb|BX005057.8| Zebrafish DNA sequence from clone DKEY-12L12 in linkage group 24,
             complete sequence
          Length = 238625

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   ctgccatgagccatgagccatgtg 160
             |||||||| |||||||||||||||
Sbjct: 58152 ctgccatgtgccatgagccatgtg 58175
to top
>dbj|AK131076.1| Homo sapiens mRNA for FLJ00263 protein
          Length = 4513

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  gccatgagccatgagccatg 158
            ||||||||||||||||||||
Sbjct: 3213 gccatgagccatgagccatg 3194
to top
>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 210519 gccatgagccatgagccatg 210500



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 210512 gccatgagccatgagccatg 210493



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 210505 gccatgagccatgagccatg 210486



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 210498 gccatgagccatgagccatg 210479



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 210491 gccatgagccatgagccatg 210472



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 210484 gccatgagccatgagccatg 210465



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 210477 gccatgagccatgagccatg 210458



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 210470 gccatgagccatgagccatg 210451



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 210463 gccatgagccatgagccatg 210444



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 210456 gccatgagccatgagccatg 210437



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 210449 gccatgagccatgagccatg 210430



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 204998 gccatgagccatgagccatg 204979



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 204991 gccatgagccatgagccatg 204972



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 204984 gccatgagccatgagccatg 204965
to top
>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
             sequence
          Length = 299903

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 139   gccatgagccatgagccatgtgcc 162
             ||||| ||||||||||||||||||
Sbjct: 55596 gccatcagccatgagccatgtgcc 55573
to top
>gb|AE003510.5| Drosophila melanogaster chromosome X, section 62 of 74 of the complete
              sequence
          Length = 297236

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 271758 gccatgagccatgagccatg 271777



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 271751 gccatgagccatgagccatg 271770
to top
>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 148443 gccatgagccatgagccatg 148462
to top
>dbj|D15050.1|HUMAREB6 Homo sapiens mRNA for transcription factor AREB6, complete cds
          Length = 5316

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  gccatgagccatgagccatg 158
            ||||||||||||||||||||
Sbjct: 4013 gccatgagccatgagccatg 3994
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 284     cgtcgaggaggtcgtactcc 303
               ||||||||||||||||||||
Sbjct: 1460724 cgtcgaggaggtcgtactcc 1460705
to top
>gb|AC147637.3| Mus musculus BAC clone RP23-205M20 from 9, complete sequence
          Length = 211684

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 484    ttgctgccggagatgttgta 503
              ||||||||||||||||||||
Sbjct: 188972 ttgctgccggagatgttgta 188991
to top
>dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:KB43F12, MX1-D21S171
              region, complete sequence
          Length = 158063

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    gccatgagccatgagccatg 158
              ||||||||||||||||||||
Sbjct: 148443 gccatgagccatgagccatg 148462


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,097,163
Number of Sequences: 3902068
Number of extensions: 4097163
Number of successful extensions: 70850
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70325
Number of HSP's gapped (non-prelim): 514
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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