ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah60c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XYLT2_PANTR (Q5QQ51) Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyl... 29 6.2
2XYLT2_HUMAN (Q9H1B5) Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyl... 29 6.2
3GP112_HUMAN (Q8IZF6) Probable G-protein coupled receptor 112 29 6.2

>XYLT2_PANTR (Q5QQ51) Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyltransferase II)|
           (Peptide O-xylosyltransferase 2)
          Length = 865

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -3

Query: 411 MPKKLQSYCLLRSRLKAGLEWERRQAEK 328
           MPK +  +C L  ++  G++W+  QA++
Sbjct: 198 MPKAVPRHCQLTGKMSPGIQWDESQAQQ 225



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>XYLT2_HUMAN (Q9H1B5) Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyltransferase II)|
           (xylT-II) (XT-II) (Peptide O-xylosyltransferase 1)
          Length = 865

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -3

Query: 411 MPKKLQSYCLLRSRLKAGLEWERRQAEK 328
           MPK +  +C L  ++  G++W+  QA++
Sbjct: 198 MPKAVPRHCQLTGKMSPGIQWDESQAQQ 225



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>GP112_HUMAN (Q8IZF6) Probable G-protein coupled receptor 112|
          Length = 2799

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = -3

Query: 183  LPTATLSSS*WDVV*ILSSPRNFSIPEDTADSQSLLDTYTIATACKGS 40
            LP++T++SS W+ +   SSP    IP+ T D  SLL+  T  +   G+
Sbjct: 2083 LPSSTITSS-WNRIPTASSPSTLIIPKPTLD--SLLNIMTTTSTVPGA 2127


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,076,311
Number of Sequences: 219361
Number of extensions: 1164051
Number of successful extensions: 3709
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3709
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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