| Clone Name | rbah60b22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ011926.1|HVU011926 Hordeum vulgare mRNA for Mg-protoporphyrin IX, partial Length = 1454 Score = 1199 bits (605), Expect = 0.0 Identities = 636/646 (98%), Gaps = 2/646 (0%) Strand = Plus / Minus Query: 7 gatttacagggnagaattccgatatttacttacacgaagttacgctcggacttgagctct 66 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1388 gatttacaggg-agaattccgatatttacttacacgaagttacgctcggacttgagctct 1330 Query: 67 gctggcgctggtaaaagaggaagaaaaaagaccagaaaagctacaccaaaattgggccat 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1329 gctggcgctggtaaaagaggaagaaaaaagaccagaaaagctacaccaaaattgggccat 1270 Query: 127 aagagctgaaacgcacgtcccnnnnnnngttacagaaagaacgaagaacagctgcacaaa 186 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1269 aagagctgaaacgcacgtcccaaaaaaagttacagaaagaacgaagaacagctgcacaaa 1210 Query: 187 ttactgcacgggcgacttgtatcaacagacagtccgaacaacagtcgggcggtcgccgac 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1209 ttactgcacgggcgacttgtatcaacagacagtccgaacaacagtcgggcggtcgccgac 1150 Query: 247 cgat-gctccaagatcaccctctagctcttcaagtccgccagcgcggtcttggtggcggc 305 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1149 cgattgctccaagatcaccctctagctcttcaagtccgccagcgcggtcttggtggcggc 1090 Query: 306 ggaaatcacagcgtccgaagcgtttggcaggtagtagtatttcccttgggcaacccttgc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 ggaaatcacagcgtccgaagcgtttggcaggtagtagtatttcccttgggcaacccttgc 1030 Query: 366 gatttccttggcgaatcccgtagatacaaacttgttctcggtatcgatgacaagaagcga 425 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1029 gatttccttggcgaatcccgtagatacaaacttgttttcggtatcgatgacaagaagcga 970 Query: 426 cattcctgccttgaatatttttgcagacacgtcaagtatctcatccttcaattcttgagt 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 cattcctgccttgaatatttttgcagacacgtcaagtatctcatccttcaattcttgagt 910 Query: 486 agatggtcttggtgcgtctgaagcagcggcagcttctgggtcattggatttcttcagtga 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 909 agatggtcttggtgcgtctgaagcagcggcagcttctgggtcattggatttcttcagtga 850 Query: 546 tacattagctcttccatcggtgattgcaacgatcatgatacgcccaacgtcgccactctt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 tacattagctcttccatcggtgattgcaacgatcatgatacgcccaacgtcgccactctt 790 Query: 606 ttcagcattcaatcccactctgacagctgtactcaggccatgagct 651 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 ttcagcattcaatcccactctgacagctgtactcaggccatgagct 744
>gb|BT009490.1| Triticum aestivum clone wr1.pk0064.e2:fis, full insert mRNA sequence Length = 912 Score = 862 bits (435), Expect = 0.0 Identities = 572/617 (92%), Gaps = 2/617 (0%) Strand = Plus / Minus Query: 36 ttacacgaagttacgctcggacttgagctctgctggcgctggtaaaagaggaagaaaaaa 95 ||||||||||||| |||||||||| ||| ||||||| ||||||||||||| |||||| || Sbjct: 823 ttacacgaagttatgctcggactttagccctgctggtgctggtaaaagagaaagaaagaa 764 Query: 96 gaccagaaaagctacaccaaaattgggccataagagctgaaacgcacgtcccnnnnnnng 155 || |||||| |||||||||||||||| |||||||||||||||||||||||| | Sbjct: 763 gaaaagaaaacctacaccaaaattgggtcataagagctgaaacgcacgtcccaaaaaa-g 705 Query: 156 ttacagaaagaacgaagaacagctgcacaaattactgcacggg-cgacttgtatcaacag 214 ||||||||||||| ||| ||||||||||||||||||||||| | |||| ||||| ||| Sbjct: 704 ttacagaaagaactaaggacagctgcacaaattactgcacgaaacaacttttatcatcag 645 Query: 215 acagtccgaacaacagtcgggcggtcgccgaccgatgctccaagatcaccctctagctct 274 || || | ||||| ||| |||||| || || ||| ||||| ||||| | |||||||||| Sbjct: 644 acggtacaaacaatagttgggcgggtgctgatcgacgctccgagatcgctctctagctct 585 Query: 275 tcaagtccgccagcgcggtcttggtggcggcggaaatcacagcgtccgaagcgtttggca 334 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 584 tcaagtccgccagcgcggtcttggtggcggccgaaatcacggcgtccgaagcgtttggca 525 Query: 335 ggtagtagtatttcccttgggcaacccttgcgatttccttggcgaatcccgtagatacaa 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 ggtagtagtatttcccttgggcaacccttgcgatttccttggcgaatcccgtagatacaa 465 Query: 395 acttgttctcggtatcgatgacaagaagcgacattcctgccttgaatatttttgcagaca 454 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 464 acttgttctcggtatcgatgacgagaagcgacattcctgctttgaatatttttgcagaca 405 Query: 455 cgtcaagtatctcatccttcaattcttgagtagatggtcttggtgcgtctgaagcagcgg 514 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 404 catcaagtatctcatccttcaattcttgagtagatggtcttggtgcgtctgaagcagctg 345 Query: 515 cagcttctgggtcattggatttcttcagtgatacattagctcttccatcggtgattgcaa 574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 cagcttctgggtcattggatttcttcagtgatacattagctcttccatcggtgattgcaa 285 Query: 575 cgatcatgatacgcccaacgtcgccactcttttcagcattcaatcccactctgacagctg 634 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 284 cgatcatgatacgcccaacgtcgccactcttttcagcgttcaatcccactctgacagctg 225 Query: 635 tactcaggccatgagct 651 ||||||||||||||||| Sbjct: 224 tactcaggccatgagct 208
>gb|DQ125942.1| Hordeum vulgare chloroplast Mg-chelatase subunit XANTHA-G precursor, gene, complete cds; nuclear gene for chloroplast product Length = 7993 Score = 575 bits (290), Expect = e-161 Identities = 304/311 (97%) Strand = Plus / Minus Query: 41 cgaagttacgctcggacttgagctctgctggcgctggtaaaagaggaagaaaaaagacca 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7993 cgaagttacgctcggacttgagctctgctggcgctggtaaaagaggaagaaaaaagacca 7934 Query: 101 gaaaagctacaccaaaattgggccataagagctgaaacgcacgtcccnnnnnnngttaca 160 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 7933 gaaaagctacaccaaaattgggccataagagctgaaacgcacgtcccaaaaaaagttaca 7874 Query: 161 gaaagaacgaagaacagctgcacaaattactgcacgggcgacttgtatcaacagacagtc 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7873 gaaagaacgaagaacagctgcacaaattactgcacgggcgacttgtatcaacagacagtc 7814 Query: 221 cgaacaacagtcgggcggtcgccgaccgatgctccaagatcaccctctagctcttcaagt 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7813 cgaacaacagtcgggcggtcgccgaccgatgctccaagatcaccctctagctcttcaagt 7754 Query: 281 ccgccagcgcggtcttggtggcggcggaaatcacagcgtccgaagcgtttggcaggtagt 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7753 ccgccagcgcggtcttggtggcggcggaaatcacagcgtccgaagcgtttggcaggtagt 7694 Query: 341 agtatttccct 351 ||||||||||| Sbjct: 7693 agtatttccct 7683 Score = 323 bits (163), Expect = 4e-85 Identities = 163/163 (100%) Strand = Plus / Minus Query: 470 ccttcaattcttgagtagatggtcttggtgcgtctgaagcagcggcagcttctgggtcat 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7194 ccttcaattcttgagtagatggtcttggtgcgtctgaagcagcggcagcttctgggtcat 7135 Query: 530 tggatttcttcagtgatacattagctcttccatcggtgattgcaacgatcatgatacgcc 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7134 tggatttcttcagtgatacattagctcttccatcggtgattgcaacgatcatgatacgcc 7075 Query: 590 caacgtcgccactcttttcagcattcaatcccactctgacagc 632 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7074 caacgtcgccactcttttcagcattcaatcccactctgacagc 7032 Score = 248 bits (125), Expect = 2e-62 Identities = 125/125 (100%) Strand = Plus / Minus Query: 349 ccttgggcaacccttgcgatttccttggcgaatcccgtagatacaaacttgttctcggta 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7419 ccttgggcaacccttgcgatttccttggcgaatcccgtagatacaaacttgttctcggta 7360 Query: 409 tcgatgacaagaagcgacattcctgccttgaatatttttgcagacacgtcaagtatctca 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7359 tcgatgacaagaagcgacattcctgccttgaatatttttgcagacacgtcaagtatctca 7300 Query: 469 tcctt 473 ||||| Sbjct: 7299 tcctt 7295 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 ctgtactcaggccatgagct 651 |||||||||||||||||||| Sbjct: 6950 ctgtactcaggccatgagct 6931
>dbj|AK072463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114K24, full insert sequence Length = 2571 Score = 353 bits (178), Expect = 5e-94 Identities = 330/381 (86%), Gaps = 6/381 (1%) Strand = Plus / Minus Query: 271 ctcttcaagtccgccagcgcggtcttggtggcggcggaaatcacagcgtccgaagcgttt 330 ||||||| ||||| || || |||||||||||||||||||| |||||||| ||||| || Sbjct: 2283 ctcttcaggtccgagagtgcagtcttggtggcggcggaaataacagcgtctgaagcattc 2224 Query: 331 ggcaggtagtagtatttcccttgggcaacccttgcgatttccttggcgaatcccgtagat 390 |||||||| |||||||| |||||||| |||||||| ||||||||||| ||||| || ||| Sbjct: 2223 ggcaggtaatagtatttaccttgggcgacccttgcaatttccttggcaaatcctgtggat 2164 Query: 391 acaaacttgttctcggtatcgatgacaagaagcgacattcctgccttgaatatttttgca 450 |||||||||||||||||||| || |||||||| || ||||| |||||| ||||||| || Sbjct: 2163 acaaacttgttctcggtatcaataacaagaagtgaaattccagccttgtatattttgcca 2104 Query: 451 gacacgtcaagtatctcatccttcaattcttgagtagatggtcttggtgcgtctgaagca 510 | ||| ||||||||||||||||| |||||||||| ||| |||||||| || |||||| Sbjct: 2103 gccacctcaagtatctcatcctttaattcttgagaagaaggtcttggagcatctgaa--- 2047 Query: 511 gcggcagcttctgggtcattggatttcttcagtgatacattagctcttccatcggtgatt 570 | |||||||||||| | |||||||||||||| |||||||||||||||||||||||| Sbjct: 2046 ---gtggcttctgggtcagtcgatttcttcagtgacacattagctcttccatcggtgatt 1990 Query: 571 gcaacgatcatgatacgcccaacgtcgccactcttttcagcattcaatcccactctgaca 630 ||||| ||||||||||| ||||| || || ||||||||||||||||| |||||||||||| Sbjct: 1989 gcaacaatcatgatacgtccaacatcaccgctcttttcagcattcaaacccactctgaca 1930 Query: 631 gctgtactcaggccatgagct 651 ||||| || ||||| |||||| Sbjct: 1929 gctgtgctaaggccgtgagct 1909
>dbj|AK061963.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G05, full insert sequence Length = 1438 Score = 353 bits (178), Expect = 5e-94 Identities = 330/381 (86%), Gaps = 6/381 (1%) Strand = Plus / Minus Query: 271 ctcttcaagtccgccagcgcggtcttggtggcggcggaaatcacagcgtccgaagcgttt 330 ||||||| ||||| || || |||||||||||||||||||| |||||||| ||||| || Sbjct: 1221 ctcttcaggtccgagagtgcagtcttggtggcggcggaaataacagcgtctgaagcattc 1162 Query: 331 ggcaggtagtagtatttcccttgggcaacccttgcgatttccttggcgaatcccgtagat 390 |||||||| |||||||| |||||||| |||||||| ||||||||||| ||||| || ||| Sbjct: 1161 ggcaggtaatagtatttaccttgggcgacccttgcaatttccttggcaaatcctgtggat 1102 Query: 391 acaaacttgttctcggtatcgatgacaagaagcgacattcctgccttgaatatttttgca 450 |||||||||||||||||||| || |||||||| || ||||| |||||| ||||||| || Sbjct: 1101 acaaacttgttctcggtatcaataacaagaagtgaaattccagccttgtatattttgcca 1042 Query: 451 gacacgtcaagtatctcatccttcaattcttgagtagatggtcttggtgcgtctgaagca 510 | ||| ||||||||||||||||| |||||||||| ||| |||||||| || |||||| Sbjct: 1041 gccacctcaagtatctcatcctttaattcttgagaagaaggtcttggagcatctgaa--- 985 Query: 511 gcggcagcttctgggtcattggatttcttcagtgatacattagctcttccatcggtgatt 570 | |||||||||||| | |||||||||||||| |||||||||||||||||||||||| Sbjct: 984 ---gtggcttctgggtcagtcgatttcttcagtgacacattagctcttccatcggtgatt 928 Query: 571 gcaacgatcatgatacgcccaacgtcgccactcttttcagcattcaatcccactctgaca 630 ||||| ||||||||||| ||||| || || ||||||||||||||||| |||||||||||| Sbjct: 927 gcaacaatcatgatacgtccaacatcaccgctcttttcagcattcaaacccactctgaca 868 Query: 631 gctgtactcaggccatgagct 651 ||||| || ||||| |||||| Sbjct: 867 gctgtgctaaggccgtgagct 847
>gb|AY109815.1| Zea mays CL561_1 mRNA sequence Length = 2252 Score = 234 bits (118), Expect = 3e-58 Identities = 202/230 (87%) Strand = Plus / Minus Query: 269 agctcttcaagtccgccagcgcggtcttggtggcggcggaaatcacagcgtccgaagcgt 328 ||||||||||||| | ||| |||||||||||||| || ||||| ||||| |||||||| | Sbjct: 2024 agctcttcaagtctgtcagggcggtcttggtggcagcagaaattacagcatccgaagcat 1965 Query: 329 ttggcaggtagtagtatttcccttgggcaacccttgcgatttccttggcgaatcccgtag 388 | || ||||| || |||||||| |||||||||||||| ||||||||||| |||||||| | Sbjct: 1964 tagggaggtaataatatttcccctgggcaacccttgcaatttccttggcaaatcccgtgg 1905 Query: 389 atacaaacttgttctcggtatcgatgacaagaagcgacattcctgccttgaatatttttg 448 |||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||| Sbjct: 1904 atacaaacttgttctcagtgtcgatgacaagaagggacattcctgccttgtatattttgc 1845 Query: 449 cagacacgtcaagtatctcatccttcaattcttgagtagatggtcttggt 498 ||| ||| ||||||||||| ||||||| |||||||| ||| ||||||||| Sbjct: 1844 cagccacctcaagtatctcgtccttcagttcttgagaagaaggtcttggt 1795 Score = 208 bits (105), Expect = 2e-50 Identities = 126/133 (94%) Strand = Plus / Minus Query: 519 ttctgggtcattggatttcttcagtgatacattagctcttccatcggtgattgcaacgat 578 |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 1774 ttctgggtcagtggatctcttcagtgatacattagctcttccatcggtgattgcaacaat 1715 Query: 579 catgatacgcccaacgtcgccactcttttcagcattcaatcccactctgacagctgtact 638 ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1714 catgatacgcccaacatcgccactcttttcagcattcagacccactctgacagctgtact 1655 Query: 639 caggccatgagct 651 |||||||||||| Sbjct: 1654 taggccatgagct 1642
>dbj|AK060665.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C01, full insert sequence Length = 1226 Score = 161 bits (81), Expect = 4e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 271 ctcttcaagtccgccagcgcggtcttggtggcggcggaaatcacagcgtccgaagcgttt 330 ||||||| ||||| || || |||||||||||||||||||| |||||||| ||||| || Sbjct: 165 ctcttcaggtccgagagtgcagtcttggtggcggcggaaataacagcgtctgaagcattc 106 Query: 331 ggcaggtagtagtatttcccttgggcaacccttgcgatttccttggcgaatcccgtagat 390 |||||||| |||||||| |||||||| |||||||| ||||||||||| ||||| || ||| Sbjct: 105 ggcaggtaatagtatttaccttgggcgacccttgcaatttccttggcaaatcctgtggat 46 Query: 391 acaaacttgttctcggtatcgatgacaagaagcgacattcc 431 |||||||||||||||||||| || |||||||| || ||||| Sbjct: 45 acaaacttgttctcggtatcaataacaagaagtgaaattcc 5
>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete sequence Length = 166888 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Plus Query: 517 gcttctgggtcattggatttcttcagtgatacattagctcttccatcggtgattgcaacg 576 |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 8228 gcttctgggtcagtcgatttcttcagtgacacattagctcttccatcggtgattgcaaca 8287 Query: 577 atcatgatacgcccaacgtcgccactcttttcagcattcaatcccactctgacagc 632 ||||||||||| ||||| || || ||||||||||||||||| |||||||||||||| Sbjct: 8288 atcatgatacgtccaacatcaccgctcttttcagcattcaaacccactctgacagc 8343 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Plus Query: 349 ccttgggcaacccttgcgatttccttggcgaatcccgtagatacaaacttgttctcggta 408 |||||||| |||||||| ||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 7887 ccttgggcgacccttgcaatttccttggcaaatcctgtggatacaaacttgttctcggta 7946 Query: 409 tcgatgacaagaagcgacattcctgccttgaatatttttgcagacacgtcaagtatctca 468 || || |||||||| || ||||| |||||| ||||||| ||| ||| |||||||||||| Sbjct: 7947 tcaataacaagaagtgaaattccagccttgtatattttgccagccacctcaagtatctca 8006 Query: 469 tcctt 473 ||||| Sbjct: 8007 tcctt 8011 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 271 ctcttcaagtccgccagcgcggtcttggtggcggcggaaatcacagcgtccgaagcgttt 330 ||||||| ||||| || || |||||||||||||||||||| |||||||| ||||| || Sbjct: 7292 ctcttcaggtccgagagtgcagtcttggtggcggcggaaataacagcgtctgaagcattc 7351 Query: 331 ggcaggtagtagtattt 347 |||||||| |||||||| Sbjct: 7352 ggcaggtaatagtattt 7368
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Minus Query: 517 gcttctgggtcattggatttcttcagtgatacattagctcttccatcggtgattgcaacg 576 |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 33656852 gcttctgggtcagtcgatttcttcagtgacacattagctcttccatcggtgattgcaaca 33656793 Query: 577 atcatgatacgcccaacgtcgccactcttttcagcattcaatcccactctgacagc 632 ||||||||||| ||||| || || ||||||||||||||||| |||||||||||||| Sbjct: 33656792 atcatgatacgtccaacatcaccgctcttttcagcattcaaacccactctgacagc 33656737 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 349 ccttgggcaacccttgcgatttccttggcgaatcccgtagatacaaacttgttctcggta 408 |||||||| |||||||| ||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 33657193 ccttgggcgacccttgcaatttccttggcaaatcctgtggatacaaacttgttctcggta 33657134 Query: 409 tcgatgacaagaagcgacattcctgccttgaatatttttgcagacacgtcaagtatctca 468 || || |||||||| || ||||| |||||| ||||||| ||| ||| |||||||||||| Sbjct: 33657133 tcaataacaagaagtgaaattccagccttgtatattttgccagccacctcaagtatctca 33657074 Query: 469 tcctt 473 ||||| Sbjct: 33657073 tcctt 33657069 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 271 ctcttcaagtccgccagcgcggtcttggtggcggcggaaatcacagcgtccgaagcgttt 330 ||||||| ||||| || || |||||||||||||||||||| |||||||| ||||| || Sbjct: 33657788 ctcttcaggtccgagagtgcagtcttggtggcggcggaaataacagcgtctgaagcattc 33657729 Query: 331 ggcaggtagtagtattt 347 |||||||| |||||||| Sbjct: 33657728 ggcaggtaatagtattt 33657712
>gb|AC137507.3| Oryza sativa chromosome 3 BAC OSJNBb0033J23 genomic sequence, complete sequence Length = 126862 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Minus Query: 517 gcttctgggtcattggatttcttcagtgatacattagctcttccatcggtgattgcaacg 576 |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 28221 gcttctgggtcagtcgatttcttcagtgacacattagctcttccatcggtgattgcaaca 28162 Query: 577 atcatgatacgcccaacgtcgccactcttttcagcattcaatcccactctgacagc 632 ||||||||||| ||||| || || ||||||||||||||||| |||||||||||||| Sbjct: 28161 atcatgatacgtccaacatcaccgctcttttcagcattcaaacccactctgacagc 28106 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 349 ccttgggcaacccttgcgatttccttggcgaatcccgtagatacaaacttgttctcggta 408 |||||||| |||||||| ||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 28562 ccttgggcgacccttgcaatttccttggcaaatcctgtggatacaaacttgttctcggta 28503 Query: 409 tcgatgacaagaagcgacattcctgccttgaatatttttgcagacacgtcaagtatctca 468 || || |||||||| || ||||| |||||| ||||||| ||| ||| |||||||||||| Sbjct: 28502 tcaataacaagaagtgaaattccagccttgtatattttgccagccacctcaagtatctca 28443 Query: 469 tcctt 473 ||||| Sbjct: 28442 tcctt 28438 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 271 ctcttcaagtccgccagcgcggtcttggtggcggcggaaatcacagcgtccgaagcgttt 330 ||||||| ||||| || || |||||||||||||||||||| |||||||| ||||| || Sbjct: 29157 ctcttcaggtccgagagtgcagtcttggtggcggcggaaataacagcgtctgaagcattc 29098 Query: 331 ggcaggtagtagtattt 347 |||||||| |||||||| Sbjct: 29097 ggcaggtaatagtattt 29081
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Minus Query: 517 gcttctgggtcattggatttcttcagtgatacattagctcttccatcggtgattgcaacg 576 |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 33747324 gcttctgggtcagtcgatttcttcagtgacacattagctcttccatcggtgattgcaaca 33747265 Query: 577 atcatgatacgcccaacgtcgccactcttttcagcattcaatcccactctgacagc 632 ||||||||||| ||||| || || ||||||||||||||||| |||||||||||||| Sbjct: 33747264 atcatgatacgtccaacatcaccgctcttttcagcattcaaacccactctgacagc 33747209 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 349 ccttgggcaacccttgcgatttccttggcgaatcccgtagatacaaacttgttctcggta 408 |||||||| |||||||| ||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 33747665 ccttgggcgacccttgcaatttccttggcaaatcctgtggatacaaacttgttctcggta 33747606 Query: 409 tcgatgacaagaagcgacattcctgccttgaatatttttgcagacacgtcaagtatctca 468 || || |||||||| || ||||| |||||| ||||||| ||| ||| |||||||||||| Sbjct: 33747605 tcaataacaagaagtgaaattccagccttgtatattttgccagccacctcaagtatctca 33747546 Query: 469 tcctt 473 ||||| Sbjct: 33747545 tcctt 33747541 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 271 ctcttcaagtccgccagcgcggtcttggtggcggcggaaatcacagcgtccgaagcgttt 330 ||||||| ||||| || || |||||||||||||||||||| |||||||| ||||| || Sbjct: 33748260 ctcttcaggtccgagagtgcagtcttggtggcggcggaaataacagcgtctgaagcattc 33748201 Query: 331 ggcaggtagtagtattt 347 |||||||| |||||||| Sbjct: 33748200 ggcaggtaatagtattt 33748184
>ref|NM_100725.2| Arabidopsis thaliana PDE166; magnesium chelatase/ nucleoside-triphosphatase/ nucleotide binding AT1G08520 (PDE166) mRNA, complete cds Length = 2548 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 313 acagcgtccgaagcgtttggcaggtagtagtatttcccttgggcaacccttgcgatttcc 372 ||||| |||||||| ||||||| ||| || ||||| ||||| ||||| |||||||| ||| Sbjct: 2360 acagcatccgaagcatttggcaagtaataatattttccttgagcaactcttgcgatctcc 2301 Query: 373 ttggcgaatcccgtagatacaaacttgttctcggtatcgatgacaagaagcgacattcct 432 || || || || || || |||||||||||||||||||| || || ||||| ||||| ||| Sbjct: 2300 tttgcaaaaccagttgaaacaaacttgttctcggtatcaatcactagaagagacatccct 2241 Query: 433 gccttgaatatttttgcagacacgtcaagtatctcatccttcaattctt 481 |||||| |||| || ||| || || || ||||||||||||||||||| Sbjct: 2240 gccttgtatatcttcccagcaacttccagaatctcatccttcaattctt 2192
>gb|AY091402.1| Arabidopsis thaliana putative Mg-chelatase (At1g08520) mRNA, complete cds Length = 2314 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 313 acagcgtccgaagcgtttggcaggtagtagtatttcccttgggcaacccttgcgatttcc 372 ||||| |||||||| ||||||| ||| || ||||| ||||| ||||| |||||||| ||| Sbjct: 2234 acagcatccgaagcatttggcaagtaataatattttccttgagcaactcttgcgatctcc 2175 Query: 373 ttggcgaatcccgtagatacaaacttgttctcggtatcgatgacaagaagcgacattcct 432 || || || || || || |||||||||||||||||||| || || ||||| ||||| ||| Sbjct: 2174 tttgcaaaaccagttgaaacaaacttgttctcggtatcaatcactagaagagacatccct 2115 Query: 433 gccttgaatatttttgcagacacgtcaagtatctcatccttcaattctt 481 |||||| |||| || ||| || || || ||||||||||||||||||| Sbjct: 2114 gccttgtatatcttcccagcaacttccagaatctcatccttcaattctt 2066
>gb|AY063821.1| Arabidopsis thaliana putative Mg-chelatase (At1g08520) mRNA, complete cds Length = 2493 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 313 acagcgtccgaagcgtttggcaggtagtagtatttcccttgggcaacccttgcgatttcc 372 ||||| |||||||| ||||||| ||| || ||||| ||||| ||||| |||||||| ||| Sbjct: 2292 acagcatccgaagcatttggcaagtaataatattttccttgagcaactcttgcgatctcc 2233 Query: 373 ttggcgaatcccgtagatacaaacttgttctcggtatcgatgacaagaagcgacattcct 432 || || || || || || |||||||||||||||||||| || || ||||| ||||| ||| Sbjct: 2232 tttgcaaaaccagttgaaacaaacttgttctcggtatcaatcactagaagagacatccct 2173 Query: 433 gccttgaatatttttgcagacacgtcaagtatctcatccttcaattctt 481 |||||| |||| || ||| || || || ||||||||||||||||||| Sbjct: 2172 gccttgtatatcttcccagcaacttccagaatctcatccttcaattctt 2124
>gb|AY114693.1| Arabidopsis thaliana magnesium-chelatase subunit ChlD-like protein, mRNA, complete cds Length = 1446 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 313 acagcgtccgaagcgtttggcaggtagtagtatttcccttgggcaacccttgcgatttcc 372 ||||| |||||||| ||||||| ||| || ||||| ||||| ||||| |||||||| ||| Sbjct: 1367 acagcatccgaagcatttggcaagtaataatattttccttgagcaactcttgcgatctcc 1308 Query: 373 ttggcgaatcccgtagatacaaacttgttctcggtatcgatgacaagaagcgacattcct 432 || || || || || || |||||||||||||||||||| || || ||||| ||||| ||| Sbjct: 1307 tttgcaaaaccagttgaaacaaacttgttctcggtatcaatcactagaagagacatccct 1248 Query: 433 gccttgaatatttttgcagacacgtcaagtatctcatccttcaattctt 481 |||||| |||| || ||| || || || ||||||||||||||||||| Sbjct: 1247 gccttgtatatcttcccagcaacttccagaatctcatccttcaattctt 1199
>gb|AY059906.1| Arabidopsis thaliana similar to magnesium-chelatase subunit ChlD precursor (T27G7.20) mRNA, complete cds Length = 2561 Score = 105 bits (53), Expect = 2e-19 Identities = 140/169 (82%) Strand = Plus / Minus Query: 313 acagcgtccgaagcgtttggcaggtagtagtatttcccttgggcaacccttgcgatttcc 372 ||||| |||||||| ||||||| ||| || ||||| ||||| ||||| |||||||| ||| Sbjct: 2374 acagcatccgaagcatttggcaagtaataatattttccttgagcaactcttgcgatctcc 2315 Query: 373 ttggcgaatcccgtagatacaaacttgttctcggtatcgatgacaagaagcgacattcct 432 || || || || || || |||||||||||||||||||| || || ||||| ||||| ||| Sbjct: 2314 tttgcaaaaccagttgaaacaaacttgttctcggtatcaatcactagaagagacatccct 2255 Query: 433 gccttgaatatttttgcagacacgtcaagtatctcatccttcaattctt 481 |||||| |||| || ||| || || || ||||||||||||||||||| Sbjct: 2254 gccttgtatatcttcccagcaacttccagaatctcatccttcaattctt 2206
>gb|AF083555.1|AF083555 Arabidopsis thaliana magnesium-chelatase subunit CHLD precursor, mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 2309 Score = 101 bits (51), Expect = 3e-18 Identities = 138/167 (82%) Strand = Plus / Minus Query: 313 acagcgtccgaagcgtttggcaggtagtagtatttcccttgggcaacccttgcgatttcc 372 ||||| |||||||| ||||||| ||| || ||||| ||||| ||||| |||||||| ||| Sbjct: 2133 acagcatccgaagcatttggcaagtaataatattttccttgagcaactcttgcgatctcc 2074 Query: 373 ttggcgaatcccgtagatacaaacttgttctcggtatcgatgacaagaagcgacattcct 432 || || || || || || |||||||||||||||||||| || || ||||| ||||| ||| Sbjct: 2073 tttgcaaaaccagttgaaacaaacttgttctcggtatcaatcactagaagagacatccct 2014 Query: 433 gccttgaatatttttgcagacacgtcaagtatctcatccttcaattc 479 |||||| |||| || ||| || || || ||||||||||||||||| Sbjct: 2013 gccttgtatatcttcccagcaacttccagaatctcatccttcaattc 1967
>emb|Y10022.1|NTCHLDMGC N.tabacum mRNA for CHLD magnesium chelatase subunit Length = 2495 Score = 93.7 bits (47), Expect = 7e-16 Identities = 250/317 (78%), Gaps = 3/317 (0%) Strand = Plus / Minus Query: 310 atcacagcgtccgaagcgtttggcaggtagtagtatttcccttgggcaacccttgcgatt 369 |||||||| || ||||| ||||| | || ||||| |||||||| || || || |||||| Sbjct: 2270 atcacagcatctgaagcatttggtaaataatagtacttcccttgagctactctcgcgatt 2211 Query: 370 tccttggcgaatcccgtagatacaaacttgttctcggtatcgatgacaagaagcgacatt 429 || || || || || ||||| |||||||| || || ||||| ||||| || || |||||| Sbjct: 2210 tctttcgcaaaaccagtagaaacaaacttattttctgtatctatgacgaggagagacatt 2151 Query: 430 cctgccttgaatatttttgcagacacgtcaagtatctcatccttcaattcttgagtagat 489 |||| ||| ||||||| ||| ||| || || ||||||||||||| ||||| | ||| Sbjct: 2150 cctgttttgtatattttaccagccacctcgagaatctcatccttcagctcttgggaagaa 2091 Query: 490 ggtcttggtgcgtctgaagcagcggcagcttctgggtcattggatttcttcagtgataca 549 ||||| ||||| || ||||| | |||||| ||||| ||||| | || || || | Sbjct: 2090 ggtctgggtgcatcagaagcttc---agcttcagggtctgtggatcttttaagagagatg 2034 Query: 550 ttagctcttccatcggtgattgcaacgatcatgatacgcccaacgtcgccactcttttca 609 |||||||| ||||| || |||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 2033 ttagctctaccatcagtaattgcaacaatcatgatacgtccaacatcaccactcttttct 1974 Query: 610 gcattcaatcccactct 626 ||||||| ||| ||||| Sbjct: 1973 gcattcattccaactct 1957
>dbj|AP004485.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08D14, TM0018, complete sequence Length = 86539 Score = 75.8 bits (38), Expect = 2e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 349 ccttgggcaacccttgcgatttccttggcgaatcccgtagatacaaacttgttctcggta 408 ||||||||||| || || || ||||||||||| ||||| || ||||||||||| || || Sbjct: 37048 ccttgggcaactctagcaatctccttggcgaaacccgttgaaacaaacttgttttcagtg 37107 Query: 409 tcgatgacaagaagcgacattcctgc 434 ||||||||||| || ||||||||||| Sbjct: 37108 tcgatgacaaggagggacattcctgc 37133 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 514 gcagcttctgggtcattggatttcttcagtgatacattagctcttccatcggtgattgca 573 |||||||| |||||||| ||| | |||| ||||| |||||||| ||||||||||| ||| Sbjct: 37451 gcagcttcagggtcatttgatcttttcaatgatatgttagctctgccatcggtgatagca 37510 Query: 574 acgatcatgatacgcccaacgtcgccactcttttcagcattcaatcc 620 || ||||| || || ||||| || ||||| || || ||||| ||||| Sbjct: 37511 acaatcattatccgtccaacatctccacttttctctgcatttaatcc 37557
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 349 ccttgggcaacccttgcgatttccttggcgaatcccgtagatacaaacttgttctcggta 408 ||||| ||||| |||||||| ||||| || || || || || |||||||||||||||||| Sbjct: 81479 ccttgagcaactcttgcgatctcctttgcaaaaccagttgaaacaaacttgttctcggta 81420 Query: 409 tcgatgacaagaagcgacattcctgccttgaatat 443 || || || ||||| ||||| ||||||||| |||| Sbjct: 81419 tcaatcactagaagagacatccctgccttgtatat 81385
>emb|CR955008.2| Medicago truncatula chromosome 5 clone mte1-51b2, COMPLETE SEQUENCE Length = 110446 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 559 ccatcggtgattgcaacgatcatgatacgcccaacgtcgccactcttttcagcattcaat 618 ||||| ||||||||||| ||||| ||||| ||||| |||||||| || || ||||| ||| Sbjct: 27122 ccatcagtgattgcaacaatcattatacgtccaacatcgccacttttctctgcatttaat 27063 Query: 619 cc 620 || Sbjct: 27062 cc 27061 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 349 ccttgggcaacccttgcgatttccttggcgaatcccgtagatacaaacttgttctcggta 408 ||||| ||||| || || || ||||| ||||| || || || ||||||||||| || || Sbjct: 27781 ccttgagcaactctagcaatctccttcgcgaaacctgtcgagacaaacttgttttcagtg 27722 Query: 409 tcgatgacaagaagcgacattcctg 433 ||||||||||| || |||||||||| Sbjct: 27721 tcgatgacaaggagagacattcctg 27697
>gb|AF014399.1|AF014399 Pisum sativum Mg-chelatase subunit D (ChlD) mRNA, complete cds Length = 2607 Score = 52.0 bits (26), Expect = 0.002 Identities = 95/118 (80%) Strand = Plus / Minus Query: 316 gcgtccgaagcgtttggcaggtagtagtatttcccttgggcaacccttgcgatttccttg 375 ||||| ||||| ||||||| || || || |||||||| ||||| || || || || || Sbjct: 2248 gcgtcagaagcatttggcaaataataatacttcccttgagcaactctagcaatctcttta 2189 Query: 376 gcgaatcccgtagatacaaacttgttctcggtatcgatgacaagaagcgacattcctg 433 ||||| || || || ||||||||||| || || ||||||||||| || |||||||||| Sbjct: 2188 gcgaaaccagttgacacaaacttgttttcagtgtcgatgacaaggagagacattcctg 2131 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 559 ccatcggtgattgcaacgatcatgatacgcccaacgtcgccactcttttcagcattcaat 618 ||||| ||||||||||| ||||| ||||| ||||| || ||||| || || ||||| ||| Sbjct: 2005 ccatcagtgattgcaacaatcattatacgtccaacatcaccacttttctctgcatttaat 1946 Query: 619 cccactctgacagctgt 635 || || || |||||||| Sbjct: 1945 ccaaccctaacagctgt 1929
>gb|AC007569.22| Homo sapiens 12 BAC RP11-689B22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111074 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 78 taaaagaggaagaaaaaagacca 100 ||||||||||||||||||||||| Sbjct: 90059 taaaagaggaagaaaaaagacca 90081
>emb|CR391914.17| Zebrafish DNA sequence from clone CH211-69O18 in linkage group 16, complete sequence Length = 170876 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 ccttgaatatttttgcagacac 455 |||||||||||||||||||||| Sbjct: 75250 ccttgaatatttttgcagacac 75271
>emb|AL162576.27| Human DNA sequence from clone RP11-568F20 on chromosome 13 Contains a ubiquitin pseudogene, complete sequence Length = 105783 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 74 ctggtaaaagaggaagaaaaaa 95 |||||||||||||||||||||| Sbjct: 14498 ctggtaaaagaggaagaaaaaa 14477
>emb|CR378674.1| Photobacterium profundum SS9; segment 12/12 Length = 251097 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 gttctcggtatcgatgacaaga 420 |||||||||||||||||||||| Sbjct: 223699 gttctcggtatcgatgacaaga 223720
>emb|BX296552.9| Zebrafish DNA sequence from clone CH211-247P22, complete sequence Length = 171208 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 ccttgaatatttttgcagacac 455 |||||||||||||||||||||| Sbjct: 26098 ccttgaatatttttgcagacac 26119
>gb|AY558358.1| Saccharomyces cerevisiae clone FLH111364.01X YKL153W gene, complete cds Length = 510 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 agcagcggcagcttctgggtc 527 ||||||||||||||||||||| Sbjct: 79 agcagcggcagcttctgggtc 99
>emb|Z71265.1|CEM05B5 Caenorhabditis elegans Cosmid M05B5, complete sequence Length = 19144 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 agaaaaaagaccagaaaagct 108 ||||||||||||||||||||| Sbjct: 10732 agaaaaaagaccagaaaagct 10712
>emb|Z26877.1|SCDCHR11 S.cerevisiae (S288C) 36.2kb DNA fragment from chromosome 11 Length = 36272 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 agcagcggcagcttctgggtc 527 ||||||||||||||||||||| Sbjct: 27771 agcagcggcagcttctgggtc 27791
>gb|AC090150.9| Homo sapiens chromosome 8, clone RP11-521M14, complete sequence Length = 210629 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 ttcctgccttgaatatttttg 448 ||||||||||||||||||||| Sbjct: 65206 ttcctgccttgaatatttttg 65226
>emb|X06408.1|SCGPM Yeast GPM gene for phosphoglycerate mutase (EC 5.4.2.1) Length = 1154 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 agcagcggcagcttctgggtc 527 ||||||||||||||||||||| Sbjct: 963 agcagcggcagcttctgggtc 943
>gb|AC093329.6| Homo sapiens chromosome 8, clone RP11-662G23, complete sequence Length = 191820 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 agaaaaaagaccagaaaagct 108 ||||||||||||||||||||| Sbjct: 100446 agaaaaaagaccagaaaagct 100426
>gb|AC068510.8| Homo sapiens chromosome 8, clone RP11-662E23, complete sequence Length = 191820 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 agaaaaaagaccagaaaagct 108 ||||||||||||||||||||| Sbjct: 100445 agaaaaaagaccagaaaagct 100425
>gb|AC160394.2| Mus musculus BAC clone RP23-116C19 from chromosome 9, complete sequence Length = 201200 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 502 tctgaagcagcggcagcttctgggt 526 ||||||||||||||||||| ||||| Sbjct: 105606 tctgaagcagcggcagcttgtgggt 105582
>gb|AC105137.17| Homo sapiens chromosome 15, clone CTD-2562G15, complete sequence Length = 178059 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 agaggaagaaaaaagaccaga 102 ||||||||||||||||||||| Sbjct: 100632 agaggaagaaaaaagaccaga 100612
>gb|AC016813.20| Homo sapiens chromosome 8, clone RP11-495O10, complete sequence Length = 183568 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 ctgccttgaatatttttgcag 451 ||||||||||||||||||||| Sbjct: 38340 ctgccttgaatatttttgcag 38320
>emb|X58789.1|SCGPM1 S.cerevisiae gene for phosphoglycerate mutase Length = 2432 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 agcagcggcagcttctgggtc 527 ||||||||||||||||||||| Sbjct: 1461 agcagcggcagcttctgggtc 1441
>emb|Z28152.1|SCYKL153W S.cerevisiae chromosome XI reading frame ORF YKL153w Length = 2581 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 agcagcggcagcttctgggtc 527 ||||||||||||||||||||| Sbjct: 1343 agcagcggcagcttctgggtc 1363
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 tttcccttgggcaacccttgc 365 ||||||||||||||||||||| Sbjct: 332951 tttcccttgggcaacccttgc 332931
>gb|DQ332621.1| Synthetic construct Saccharomyces cerevisiae clone FLH201438.01X GPM1 gene, complete sequence Length = 744 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 agcagcggcagcttctgggtc 527 ||||||||||||||||||||| Sbjct: 708 agcagcggcagcttctgggtc 688
>emb|AL935285.6| Zebrafish DNA sequence from clone DKEY-37A1, complete sequence Length = 230323 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 433 gccttgaatatttttgcagacacgt 457 ||||||||||||||| ||||||||| Sbjct: 89893 gccttgaatatttttccagacacgt 89869
>ref|NM_104127.1| Arabidopsis thaliana unknown protein AT1G52490 mRNA, complete cds Length = 1272 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 taaaagaggaagaaaaaaga 97 |||||||||||||||||||| Sbjct: 98 taaaagaggaagaaaaaaga 117
>ref|XM_637631.1| Dictyostelium discoideum hypothetical protein (DDB0169108), partial mRNA Length = 678 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 taaaagaggaagaaaaaaga 97 |||||||||||||||||||| Sbjct: 642 taaaagaggaagaaaaaaga 661
>gb|AC093102.2| Drosophila melanogaster clone BACR34C10, complete sequence Length = 179428 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ggtaaaagaggaagaaaaaa 95 |||||||||||||||||||| Sbjct: 146985 ggtaaaagaggaagaaaaaa 146966
>ref|XM_365374.1| Magnaporthe grisea 70-15 predicted protein (MG02076.4) partial mRNA Length = 1050 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 aagaggaagaaaaaagaccagaaa 104 |||||||||||||||||| ||||| Sbjct: 298 aagaggaagaaaaaagacaagaaa 321
>gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence Length = 302156 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 taaaagaggaagaaaaaaga 97 |||||||||||||||||||| Sbjct: 119229 taaaagaggaagaaaaaaga 119248
>gb|AC139863.5| Mus musculus chromosome 14, clone RP23-19M21, complete sequence Length = 194221 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gaagaaaaaagaccagaaaa 105 |||||||||||||||||||| Sbjct: 125911 gaagaaaaaagaccagaaaa 125892
>ref|XM_650441.1| Entamoeba histolytica HM-1:IMSS actin (27.t00041) partial mRNA Length = 2631 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 taaaagaggaagaaaaaaga 97 |||||||||||||||||||| Sbjct: 35 taaaagaggaagaaaaaaga 54
>emb|CR450841.7| Zebrafish DNA sequence from clone DKEY-16N9 in linkage group 11, complete sequence Length = 263287 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ttgaatatttttgcagacac 455 |||||||||||||||||||| Sbjct: 159442 ttgaatatttttgcagacac 159461
>emb|CR450706.7| Zebrafish DNA sequence from clone CH211-14K11 in linkage group 25, complete sequence Length = 192643 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ttgaatatttttgcagacac 455 |||||||||||||||||||| Sbjct: 181166 ttgaatatttttgcagacac 181185
>emb|CR728015.2|CNS0GOOL Tetraodon nigroviridis full-length cDNA Length = 1087 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 tggtaaaagaggaagaaaaa 94 |||||||||||||||||||| Sbjct: 46 tggtaaaagaggaagaaaaa 65
>ref|XM_759415.1| Theileria parva strain Muguga chromosome 4 phenylalanyl-tRNA synthetase beta subunit (TP04_0871) partial mRNA Length = 1885 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 agaaaagctacaccaaaatt 119 |||||||||||||||||||| Sbjct: 429 agaaaagctacaccaaaatt 448
>gb|AC134791.8| Mus musculus chromosome 14, clone RP23-377F8, complete sequence Length = 210013 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gaagaaaaaagaccagaaaa 105 |||||||||||||||||||| Sbjct: 38393 gaagaaaaaagaccagaaaa 38374
>ref|XM_668841.1| Plasmodium berghei strain ANKA hypothetical protein (PB402155.00.0) partial mRNA Length = 1877 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gtaaaagaggaagaaaaaag 96 |||||||||||||||||||| Sbjct: 1441 gtaaaagaggaagaaaaaag 1460
>gb|AC154380.2| Mus musculus BAC clone RP23-52F1 from chromosome 14, complete sequence Length = 244524 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gaagaaaaaagaccagaaaa 105 |||||||||||||||||||| Sbjct: 16389 gaagaaaaaagaccagaaaa 16370
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 gccagcgcggtcttggtggcggcg 306 |||||| ||||||||||||||||| Sbjct: 87230 gccagcacggtcttggtggcggcg 87207
>emb|CR391928.7| Zebrafish DNA sequence from clone DKEYP-21F4 in linkage group 5, complete sequence Length = 72746 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ttgaatatttttgcagacac 455 |||||||||||||||||||| Sbjct: 62134 ttgaatatttttgcagacac 62115
>emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on chromosome 13 Contains the 3' end of the Csh1 gene for chorionic somatomammotropin hormone 1, two genes for novel proteins similar to chorionic somatomammotropin hormone 1 (Csh1), the Prlpi gene for prolactin-like protein I (Prlpj, decidualin), the Csh2 gene for chorionic somatomammotropin hormone 2, the gene for protein 1600016E11RIK similar to prolactin and a novel gene (4930511O05Rik), complete sequence Length = 207737 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 atttcttcagtgatacatta 552 |||||||||||||||||||| Sbjct: 50401 atttcttcagtgatacatta 50382 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 atttcttcagtgatacatta 552 |||||||||||||||||||| Sbjct: 15280 atttcttcagtgatacatta 15261
>dbj|AB192509.2| Sus scrofa genomic DNA, chromosome 7, BAC clone: L139G16, complete sequence Length = 157870 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 gatttcttcagtgatacatt 551 |||||||||||||||||||| Sbjct: 45842 gatttcttcagtgatacatt 45861
>gb|AC158533.2| Mus musculus BAC clone RP23-107I15 from chromosome 14, complete sequence Length = 199608 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 gaagaaaaaagaccagaaaa 105 |||||||||||||||||||| Sbjct: 13021 gaagaaaaaagaccagaaaa 13040
>ref|NM_059630.3| Caenorhabditis elegans M05B5.6 (M05B5.6) mRNA, complete cds Length = 1699 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 agaaaaaagaccagaaaagc 107 |||||||||||||||||||| Sbjct: 323 agaaaaaagaccagaaaagc 304
>gb|AC068138.6| Homo sapiens BAC clone RP11-813K12 from 2, complete sequence Length = 168698 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aaaagaggaagaaaaaagac 98 |||||||||||||||||||| Sbjct: 44012 aaaagaggaagaaaaaagac 43993
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 aaaagaggaagaaaaaagac 98 |||||||||||||||||||| Sbjct: 3830480 aaaagaggaagaaaaaagac 3830499
>gb|AC008016.2|F6D8 Arabidopsis thaliana chromosome 1 BAC F6D8 sequence, complete sequence Length = 117737 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 taaaagaggaagaaaaaaga 97 |||||||||||||||||||| Sbjct: 86607 taaaagaggaagaaaaaaga 86626
>gb|AC007451.1|AC007451 Drosophila melanogaster, chromosome 2L, region 31D1-31F4, BAC clones DS00953 and BACR48K04, complete sequence Length = 161754 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ggtaaaagaggaagaaaaaa 95 |||||||||||||||||||| Sbjct: 102125 ggtaaaagaggaagaaaaaa 102144
>gb|AE003628.2| Drosophila melanogaster chromosome 2L, section 37 of 83 of the complete sequence Length = 269102 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ggtaaaagaggaagaaaaaa 95 |||||||||||||||||||| Sbjct: 204393 ggtaaaagaggaagaaaaaa 204412
>gb|BC084879.1| Xenopus laevis hypothetical LOC495403, mRNA (cDNA clone MGC:86225 IMAGE:6958189), complete cds Length = 1917 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 agctgcacaaattactgcac 195 |||||||||||||||||||| Sbjct: 1030 agctgcacaaattactgcac 1049
>emb|AL672096.4| Mouse DNA sequence from clone RP23-293N20 on chromosome X, complete sequence Length = 179420 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gctggtaaaagaggaagaaa 92 |||||||||||||||||||| Sbjct: 77190 gctggtaaaagaggaagaaa 77209 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,287,373 Number of Sequences: 3902068 Number of extensions: 5287373 Number of successful extensions: 131344 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 131025 Number of HSP's gapped (non-prelim): 309 length of query: 651 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 628 effective length of database: 17,143,297,704 effective search space: 10765990958112 effective search space used: 10765990958112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)