ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah60b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197682.1| Oryza sativa (japonica cultivar-group) putative... 244 3e-61
2dbj|AK099250.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
3dbj|AK068963.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
4gb|AY108352.1| Zea mays PCO148182 mRNA sequence 186 7e-44
5gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 geno... 121 3e-24
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 121 3e-24
8gb|AC113277.8| Mus musculus chromosome 3, clone RP23-386C15, com... 42 2.4
9gb|AC007381.3| Homo sapiens BAC clone RP11-158I21 from 2, comple... 42 2.4
10gb|AC148759.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
11gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
12ref|NM_001017923.1| Homo sapiens chromosome 14 open reading fram... 40 9.5
13gb|DQ175916.1| Hordeum vulgare subsp. vulgare clone 29-25A-LB fl... 40 9.5
14gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate h... 40 9.5
15gb|AC154570.2| Mus musculus BAC clone RP23-385M5 from chromosome... 40 9.5
16gb|AF483708.1| Ixodes scapularis clone ISTA15_cluster42 putative... 40 9.5
17gb|AC153967.5| Mus musculus 10 BAC RP24-372A5 (Roswell Park Canc... 40 9.5
18dbj|AK126985.1| Homo sapiens cDNA FLJ45039 fis, clone BRAWH3020318 40 9.5
19gb|AC139345.8| Papio anubis clone rp41-256p17, complete sequence 40 9.5
20gb|BC030258.1| Homo sapiens, Similar to hypothetical gene LOC122... 40 9.5
21ref|XM_931433.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 9.5
22gb|AC008871.5| Homo sapiens chromosome 5 clone CTD-2197I11, comp... 40 9.5
23gb|AC034207.6| Homo sapiens chromosome 5 clone CTC-329H14, compl... 40 9.5
24gb|AC137711.21| Mus musculus chromosome 5, clone RP23-282A16, co... 40 9.5
25gb|AC136742.15| Mus musculus chromosome 5, clone RP23-145H8, com... 40 9.5
26dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
27dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
28gb|AF250395.1| Homo sapiens dopamine receptor interacting protei... 40 9.5
29dbj|AP000047.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 9.5
30gb|AC010722.2|AC010722 Homo sapiens BAC clone RP11-122L9 from Y,... 40 9.5
31dbj|BS000181.1| Pan troglodytes chromosome 22 clone:PTB-128M13, ... 40 9.5
32gb|BC105032.1| Homo sapiens chromosome 14 open reading frame 28,... 40 9.5
33gb|BC105030.1| Homo sapiens chromosome 14 open reading frame 28,... 40 9.5
34gb|U15747.1|TBU15747 Trypanosoma brucei cDNA clone SL-1A-1 40 9.5
35emb|AL049870.3|CNS0000S Human chromosome 14 DNA sequence BAC R-8... 40 9.5
36dbj|AP001717.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 9.5
37dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 9.5
38emb|AJ872271.1| Thermotoga sp. SG1 16S rRNA gene, 23S rRNA gene,... 40 9.5
39dbj|AP000566.4| Homo sapiens genomic DNA, chromosome 21q, clone:... 40 9.5
40emb|AL772237.12| Mouse DNA sequence from clone RP23-14I13 on chr... 40 9.5
41dbj|AK116554.1| Ciona intestinalis cDNA, clone:citb040e17, full ... 40 9.5
42gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
43gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
44emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa... 40 9.5
45emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb... 40 9.5
46gb|AC004388.1|AC004388 Homo Sapiens Chromosome X clone bWXD306, ... 40 9.5
47emb|AL805982.10| Mouse DNA sequence from clone RP23-119K17 on ch... 40 9.5
48gb|AY865972.1| Saguinus labiatus microRNA mir-22 gene, complete ... 40 9.5
49gb|J03265.1|YSCRBARFA Yeast (S.kluyveri) k-STE2 gene encoding rh... 40 9.5
50dbj|AP000191.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 9.5
51dbj|AP000304.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 9.5
52dbj|AP000115.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 9.5 
>ref|NM_197682.1| Oryza sativa (japonica cultivar-group) putative enoyl-CoA-hydratase
            (OSJNBa0015J15.5), mRNA
          Length = 1651

 Score =  244 bits (123), Expect = 3e-61
 Identities = 301/359 (83%), Gaps = 1/359 (0%)
 Strand = Plus / Minus

                                                                        
Query: 320  aatgcctctcgctgttctgtaggcagcttcagctcaggctcgaattctcctagcggggca 379
            ||||||||||||  ||| ||||||||  ||| ||||||||| ||||| || || || |||
Sbjct: 1466 aatgcctctcgcgattcagtaggcagtgtcaactcaggctcaaattcacccaggggagca 1407

                                                                        
Query: 380  aagtaagaatctaccatgtcctcagaaacaaactcgagtgcaggaggatcccactttggg 439
            ||||||||||| ||||||||| | || ||| |||| || ||||| |||||||||||||| 
Sbjct: 1406 aagtaagaatcgaccatgtccgctgatacatactcaagggcaggtggatcccactttgga 1347

                                                                        
Query: 440  gtcaaatccttgtcaaccagccgcgctctcacaccctcacaaaaatcatgatacaatggc 499
            |  |  ||||| || || || || ||||| |||||||||| ||| |||||| | |||  |
Sbjct: 1346 gctaggtccttctccacaagacgtgctctgacaccctcacgaaattcatgagaaaatttc 1287

                                                                        
Query: 500  tttgaaatgccattgacagacatgcggtattcacgcacaaggcattcatcaagtgtctga 559
            | ||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1286 tctgagattccattgatagacatgcggtattcacgcacaaggcattcatcaagtgtctgg 1227

                                                                        
Query: 560  tatctaccttcacgtatcgatccgtagtgatactttcaaagcaagtggggaggcctcttt 619
            ||||||||||||||||||||| || ||||| |||||||| ||||| || || ||||||||
Sbjct: 1226 tatctaccttcacgtatcgat-cgcagtgaaactttcaacgcaagaggagaagcctcttt 1168

                                                                       
Query: 620  caatcttttcagtgccaacgtacaccattcttcattcaactgagctgcttcactttcca 678
            ||| | |||||| ||||| ||| |||| |||||||| |||  |||||||||| ||||||
Sbjct: 1167 caaccgtttcagggccaaggtagaccaatcttcatttaacctagctgcttcaatttcca 1109
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>dbj|AK099250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140N04, full
            insert sequence
          Length = 1487

 Score =  244 bits (123), Expect = 3e-61
 Identities = 301/359 (83%), Gaps = 1/359 (0%)
 Strand = Plus / Minus

                                                                        
Query: 320  aatgcctctcgctgttctgtaggcagcttcagctcaggctcgaattctcctagcggggca 379
            ||||||||||||  ||| ||||||||  ||| ||||||||| ||||| || || || |||
Sbjct: 1260 aatgcctctcgcgattcagtaggcagtgtcaactcaggctcaaattcacccaggggagca 1201

                                                                        
Query: 380  aagtaagaatctaccatgtcctcagaaacaaactcgagtgcaggaggatcccactttggg 439
            ||||||||||| ||||||||| | || ||| |||| || ||||| |||||||||||||| 
Sbjct: 1200 aagtaagaatcgaccatgtccgctgatacatactcaagggcaggtggatcccactttgga 1141

                                                                        
Query: 440  gtcaaatccttgtcaaccagccgcgctctcacaccctcacaaaaatcatgatacaatggc 499
            |  |  ||||| || || || || ||||| |||||||||| ||| |||||| | |||  |
Sbjct: 1140 gctaggtccttctccacaagacgtgctctgacaccctcacgaaattcatgagaaaatttc 1081

                                                                        
Query: 500  tttgaaatgccattgacagacatgcggtattcacgcacaaggcattcatcaagtgtctga 559
            | ||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1080 tctgagattccattgatagacatgcggtattcacgcacaaggcattcatcaagtgtctgg 1021

                                                                        
Query: 560  tatctaccttcacgtatcgatccgtagtgatactttcaaagcaagtggggaggcctcttt 619
            ||||||||||||||||||||| || ||||| |||||||| ||||| || || ||||||||
Sbjct: 1020 tatctaccttcacgtatcgat-cgcagtgaaactttcaacgcaagaggagaagcctcttt 962

                                                                       
Query: 620  caatcttttcagtgccaacgtacaccattcttcattcaactgagctgcttcactttcca 678
            ||| | |||||| ||||| ||| |||| |||||||| |||  |||||||||| ||||||
Sbjct: 961  caaccgtttcagggccaaggtagaccaatcttcatttaacctagctgcttcaatttcca 903
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>dbj|AK068963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002D14, full
            insert sequence
          Length = 1503

 Score =  244 bits (123), Expect = 3e-61
 Identities = 301/359 (83%), Gaps = 1/359 (0%)
 Strand = Plus / Minus

                                                                        
Query: 320  aatgcctctcgctgttctgtaggcagcttcagctcaggctcgaattctcctagcggggca 379
            ||||||||||||  ||| ||||||||  ||| ||||||||| ||||| || || || |||
Sbjct: 1276 aatgcctctcgcgattcagtaggcagtgtcaactcaggctcaaattcacccaggggagca 1217

                                                                        
Query: 380  aagtaagaatctaccatgtcctcagaaacaaactcgagtgcaggaggatcccactttggg 439
            ||||||||||| ||||||||| | || ||| |||| || ||||| |||||||||||||| 
Sbjct: 1216 aagtaagaatcgaccatgtccgctgatacatactcaagggcaggtggatcccactttgga 1157

                                                                        
Query: 440  gtcaaatccttgtcaaccagccgcgctctcacaccctcacaaaaatcatgatacaatggc 499
            |  |  ||||| || || || || ||||| |||||||||| ||| |||||| | |||  |
Sbjct: 1156 gctaggtccttctccacaagacgtgctctgacaccctcacgaaattcatgagaaaatttc 1097

                                                                        
Query: 500  tttgaaatgccattgacagacatgcggtattcacgcacaaggcattcatcaagtgtctga 559
            | ||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1096 tctgagattccattgatagacatgcggtattcacgcacaaggcattcatcaagtgtctgg 1037

                                                                        
Query: 560  tatctaccttcacgtatcgatccgtagtgatactttcaaagcaagtggggaggcctcttt 619
            ||||||||||||||||||||| || ||||| |||||||| ||||| || || ||||||||
Sbjct: 1036 tatctaccttcacgtatcgat-cgcagtgaaactttcaacgcaagaggagaagcctcttt 978

                                                                       
Query: 620  caatcttttcagtgccaacgtacaccattcttcattcaactgagctgcttcactttcca 678
            ||| | |||||| ||||| ||| |||| |||||||| |||  |||||||||| ||||||
Sbjct: 977  caaccgtttcagggccaaggtagaccaatcttcatttaacctagctgcttcaatttcca 919
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>gb|AY108352.1| Zea mays PCO148182 mRNA sequence
          Length = 1638

 Score =  186 bits (94), Expect = 7e-44
 Identities = 310/378 (82%), Gaps = 3/378 (0%)
 Strand = Plus / Minus

                                                                        
Query: 320  aatgcctctcgctgttctgtaggcagcttcagctcaggctcgaattctcctagcggggca 379
            ||||||||||||  |||| |||||||||||| |||||||||  | || || || || || 
Sbjct: 1300 aatgcctctcgcgattctataggcagcttcaactcaggctccgaatcgccaagaggtgcg 1241

                                                                        
Query: 380  aagtaagaatctaccatgtcctcagaaacaaactcgagtgcaggaggatcccactttggg 439
            ||||| |  || |||||||| |  | |||| |||| || ||||||||||||||||| || 
Sbjct: 1240 aagtatgcgtcaaccatgtcattcgtaacatactcaagggcaggaggatcccacttagga 1181

                                                                        
Query: 440  gtcaaatccttgtcaaccagccgcgctctcacaccctcacaaaaatcatgatacaatggc 499
            || || |||||||| || || || ||||| || ||||| || || |||||| | ||| ||
Sbjct: 1180 gtgaagtccttgtcgactagtcgtgctctgactccctcgcagaattcatgagaaaattgc 1121

                                                                        
Query: 500  tttgaaatgccattgacagacatgcggtattcacgcacaaggcattcatcaagtgtctga 559
            ||||| || ||||| |  ||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 1120 tttgagattccattcatggacatgcggtactcacggacaaggcactcatcaagtgtctga 1061

                                                                        
Query: 560  tatctaccttcacgtatcgatccgtagtgatactttcaaagcaagtggggaggcctcttt 619
            |||||||| || |||||||||| | ||||| || |||||||| |  || |||||||||||
Sbjct: 1060 tatctaccctcgcgtatcgatc-gcagtgagaccttcaaagctaacggagaggcctcttt 1002

                                                                        
Query: 620  caatcttttcagtgccaacgtacaccattcttcattcaa-ctgagctgcttcactttcca 678
            ||||| |||||| |||||  ||||||||||||||||  | ||| ||||||||||||||||
Sbjct: 1001 caatcgtttcagcgccaagatacaccattcttcatttgagctg-gctgcttcactttcca 943

                              
Query: 679  atgcatcgacgatctctt 696
            | ||||| || |||||||
Sbjct: 942  aggcatcaacaatctctt 925
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>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete
             sequence
          Length = 144798

 Score =  121 bits (61), Expect = 3e-24
 Identities = 67/69 (97%)
 Strand = Plus / Minus

                                                                         
Query: 509   ccattgacagacatgcggtattcacgcacaaggcattcatcaagtgtctgatatctacct 568
             ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 23445 ccattgatagacatgcggtattcacgcacaaggcattcatcaagtgtctggtatctacct 23386

                      
Query: 569   tcacgtatc 577
             |||||||||
Sbjct: 23385 tcacgtatc 23377



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                         
Query: 320   aatgcctctcgctgttctgtaggcagcttcagctcaggctcgaattctcctagcggggca 379
             ||||||||||||  ||| ||||||||  ||| ||||||||| ||||| || || || |||
Sbjct: 23901 aatgcctctcgcgattcagtaggcagtgtcaactcaggctcaaattcacccaggggagca 23842

                                                                    
Query: 380   aagtaagaatctaccatgtcctcagaaacaaactcgagtgcaggaggatcccact 434
             ||||||||||| ||||||||| | || ||| |||| || ||||| ||||||||||
Sbjct: 23841 aagtaagaatcgaccatgtccgctgatacatactcaagggcaggtggatcccact 23787



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                         
Query: 585   agtgatactttcaaagcaagtggggaggcctctttcaatcttttcagtgccaacgtacac 644
             ||||| |||||||| ||||| || || ||||||||||| | |||||| ||||| ||| ||
Sbjct: 23285 agtgaaactttcaacgcaagaggagaagcctctttcaaccgtttcagggccaaggtagac 23226

                                              
Query: 645   cattcttcattcaactgagctgcttcactttcc 677
             || |||||||| |||  |||||||||| |||||
Sbjct: 23225 caatcttcatttaacctagctgcttcaatttcc 23193
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  121 bits (61), Expect = 3e-24
 Identities = 67/69 (97%)
 Strand = Plus / Plus

                                                                            
Query: 509      ccattgacagacatgcggtattcacgcacaaggcattcatcaagtgtctgatatctacct 568
                ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 21182261 ccattgatagacatgcggtattcacgcacaaggcattcatcaagtgtctggtatctacct 21182320

                         
Query: 569      tcacgtatc 577
                |||||||||
Sbjct: 21182321 tcacgtatc 21182329



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 96/115 (83%)
 Strand = Plus / Plus

                                                                            
Query: 320      aatgcctctcgctgttctgtaggcagcttcagctcaggctcgaattctcctagcggggca 379
                ||||||||||||  ||| ||||||||  ||| ||||||||| ||||| || || || |||
Sbjct: 21181805 aatgcctctcgcgattcagtaggcagtgtcaactcaggctcaaattcacccaggggagca 21181864

                                                                       
Query: 380      aagtaagaatctaccatgtcctcagaaacaaactcgagtgcaggaggatcccact 434
                ||||||||||| ||||||||| | || ||| |||| || ||||| ||||||||||
Sbjct: 21181865 aagtaagaatcgaccatgtccgctgatacatactcaagggcaggtggatcccact 21181919



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                            
Query: 585      agtgatactttcaaagcaagtggggaggcctctttcaatcttttcagtgccaacgtacac 644
                ||||| |||||||| ||||| || || ||||||||||| | |||||| ||||| ||| ||
Sbjct: 21182421 agtgaaactttcaacgcaagaggagaagcctctttcaaccgtttcagggccaaggtagac 21182480

                                                 
Query: 645      cattcttcattcaactgagctgcttcactttcc 677
                || |||||||| |||  |||||||||| |||||
Sbjct: 21182481 caatcttcatttaacctagctgcttcaatttcc 21182513
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  121 bits (61), Expect = 3e-24
 Identities = 67/69 (97%)
 Strand = Plus / Plus

                                                                            
Query: 509      ccattgacagacatgcggtattcacgcacaaggcattcatcaagtgtctgatatctacct 568
                ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 21193525 ccattgatagacatgcggtattcacgcacaaggcattcatcaagtgtctggtatctacct 21193584

                         
Query: 569      tcacgtatc 577
                |||||||||
Sbjct: 21193585 tcacgtatc 21193593



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 96/115 (83%)
 Strand = Plus / Plus

                                                                            
Query: 320      aatgcctctcgctgttctgtaggcagcttcagctcaggctcgaattctcctagcggggca 379
                ||||||||||||  ||| ||||||||  ||| ||||||||| ||||| || || || |||
Sbjct: 21193069 aatgcctctcgcgattcagtaggcagtgtcaactcaggctcaaattcacccaggggagca 21193128

                                                                       
Query: 380      aagtaagaatctaccatgtcctcagaaacaaactcgagtgcaggaggatcccact 434
                ||||||||||| ||||||||| | || ||| |||| || ||||| ||||||||||
Sbjct: 21193129 aagtaagaatcgaccatgtccgctgatacatactcaagggcaggtggatcccact 21193183



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                            
Query: 585      agtgatactttcaaagcaagtggggaggcctctttcaatcttttcagtgccaacgtacac 644
                ||||| |||||||| ||||| || || ||||||||||| | |||||| ||||| ||| ||
Sbjct: 21193685 agtgaaactttcaacgcaagaggagaagcctctttcaaccgtttcagggccaaggtagac 21193744

                                                 
Query: 645      cattcttcattcaactgagctgcttcactttcc 677
                || |||||||| |||  |||||||||| |||||
Sbjct: 21193745 caatcttcatttaacctagctgcttcaatttcc 21193777
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>gb|AC113277.8| Mus musculus chromosome 3, clone RP23-386C15, complete sequence
          Length = 210390

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 36     ttcctgagcaaaatctcccagattc 60
              ||||||||||||||||| |||||||
Sbjct: 168232 ttcctgagcaaaatctctcagattc 168208
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>gb|AC007381.3| Homo sapiens BAC clone RP11-158I21 from 2, complete sequence
          Length = 152081

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 197   ctcttgctgctcaaattccct 217
             |||||||||||||||||||||
Sbjct: 40706 ctcttgctgctcaaattccct 40686
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>gb|AC148759.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0030K09,
              complete sequence
          Length = 143355

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 600    gcaagtggggaggcctctttcaat 623
              |||||||| |||||||||||||||
Sbjct: 135864 gcaagtggtgaggcctctttcaat 135841
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>gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0047D03, complete sequence
          Length = 126165

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 600   gcaagtggggaggcctctttcaat 623
             |||||||| |||||||||||||||
Sbjct: 53250 gcaagtggtgaggcctctttcaat 53227
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>ref|NM_001017923.1| Homo sapiens chromosome 14 open reading frame 28 (C14orf28), mRNA
          Length = 2906

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 410 aactcgagtgcaggaggatc 429
           ||||||||||||||||||||
Sbjct: 749 aactcgagtgcaggaggatc 768
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>gb|DQ175916.1| Hordeum vulgare subsp. vulgare clone 29-25A-LB flanking T-DNA
           insertion sequence
          Length = 769

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 tctatatgaatgcctctcgc 331
           ||||||||||||||||||||
Sbjct: 477 tctatatgaatgcctctcgc 458
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>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
              through 10 and partial cds
          Length = 688489

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 503    gaaatgccattgacagacat 522
              ||||||||||||||||||||
Sbjct: 363652 gaaatgccattgacagacat 363671
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>gb|AC154570.2| Mus musculus BAC clone RP23-385M5 from chromosome 14, complete sequence
          Length = 209218

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 503    gaaatgccattgacagacat 522
              ||||||||||||||||||||
Sbjct: 145999 gaaatgccattgacagacat 145980
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>gb|AF483708.1| Ixodes scapularis clone ISTA15_cluster42 putative secreted protein
           mRNA, complete cds
          Length = 389

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 542 cattcatcaagtgtctgata 561
           ||||||||||||||||||||
Sbjct: 236 cattcatcaagtgtctgata 217
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>gb|AC153967.5| Mus musculus 10 BAC RP24-372A5 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 205657

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 593  tttcaaagcaagtggggagg 612
            ||||||||||||||||||||
Sbjct: 4953 tttcaaagcaagtggggagg 4934
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>dbj|AK126985.1| Homo sapiens cDNA FLJ45039 fis, clone BRAWH3020318
          Length = 3498

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 410 aactcgagtgcaggaggatc 429
           ||||||||||||||||||||
Sbjct: 505 aactcgagtgcaggaggatc 524
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>gb|AC139345.8| Papio anubis clone rp41-256p17, complete sequence
          Length = 179810

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 479   caaaaatcatgatacaatggctttgaaa 506
             ||||||||||| ||||| ||||||||||
Sbjct: 93469 caaaaatcatggtacaagggctttgaaa 93442
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>gb|BC030258.1| Homo sapiens, Similar to hypothetical gene LOC122525, clone
           IMAGE:4421196, mRNA, partial cds
          Length = 919

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 410 aactcgagtgcaggaggatc 429
           ||||||||||||||||||||
Sbjct: 487 aactcgagtgcaggaggatc 506
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>ref|XM_931433.1| PREDICTED: Homo sapiens hypothetical protein LOC643251
          (LOC643251), mRNA
          Length = 1056

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 29 gctagctttcctgagcaaaa 48
          ||||||||||||||||||||
Sbjct: 30 gctagctttcctgagcaaaa 11
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>gb|AC008871.5| Homo sapiens chromosome 5 clone CTD-2197I11, complete sequence
          Length = 174138

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    gggctagctttcctgagcaa 46
             ||||||||||||||||||||
Sbjct: 51141 gggctagctttcctgagcaa 51160
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>gb|AC034207.6| Homo sapiens chromosome 5 clone CTC-329H14, complete sequence
          Length = 163942

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    gggctagctttcctgagcaa 46
             ||||||||||||||||||||
Sbjct: 50886 gggctagctttcctgagcaa 50867
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>gb|AC137711.21| Mus musculus chromosome 5, clone RP23-282A16, complete sequence
          Length = 181459

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 500    tttgaaatgccattgacaga 519
              ||||||||||||||||||||
Sbjct: 152993 tttgaaatgccattgacaga 152974
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>gb|AC136742.15| Mus musculus chromosome 5, clone RP23-145H8, complete sequence
          Length = 197131

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   tttgaaatgccattgacaga 519
             ||||||||||||||||||||
Sbjct: 18143 tttgaaatgccattgacaga 18124
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 411      actcgagtgcaggaggatcccact 434
                |||||| |||||||||||||||||
Sbjct: 12406387 actcgactgcaggaggatcccact 12406410
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 600      gcaagtggggaggcctctttcaat 623
                |||||||| |||||||||||||||
Sbjct: 16672136 gcaagtggtgaggcctctttcaat 16672113
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>gb|AF250395.1| Homo sapiens dopamine receptor interacting protein 1 (DRIP1) mRNA,
           complete cds
          Length = 1449

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 410 aactcgagtgcaggaggatc 429
           ||||||||||||||||||||
Sbjct: 733 aactcgagtgcaggaggatc 752
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>dbj|AP000047.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 18/28, complete
             sequence
          Length = 50188

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   ctggatgaaaaggaaacaaa 185
             ||||||||||||||||||||
Sbjct: 10838 ctggatgaaaaggaaacaaa 10857
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>gb|AC010722.2|AC010722 Homo sapiens BAC clone RP11-122L9 from Y, complete sequence
          Length = 160723

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    gctagctttcctgagcaaaa 48
             ||||||||||||||||||||
Sbjct: 10872 gctagctttcctgagcaaaa 10853
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>dbj|BS000181.1| Pan troglodytes chromosome 22 clone:PTB-128M13, map 22, complete
              sequences
          Length = 199436

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    ctggatgaaaaggaaacaaa 185
              ||||||||||||||||||||
Sbjct: 108514 ctggatgaaaaggaaacaaa 108533
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>gb|BC105032.1| Homo sapiens chromosome 14 open reading frame 28, mRNA (cDNA clone
           MGC:132692 IMAGE:8144035), complete cds
          Length = 1232

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 410 aactcgagtgcaggaggatc 429
           ||||||||||||||||||||
Sbjct: 742 aactcgagtgcaggaggatc 761
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>gb|BC105030.1| Homo sapiens chromosome 14 open reading frame 28, mRNA (cDNA clone
           MGC:132690 IMAGE:8144033), complete cds
          Length = 1232

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 410 aactcgagtgcaggaggatc 429
           ||||||||||||||||||||
Sbjct: 742 aactcgagtgcaggaggatc 761
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>gb|U15747.1|TBU15747 Trypanosoma brucei cDNA clone SL-1A-1
          Length = 254

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 actggatgaaaaggaaacaa 184
           ||||||||||||||||||||
Sbjct: 212 actggatgaaaaggaaacaa 231
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>emb|AL049870.3|CNS0000S Human chromosome 14 DNA sequence BAC R-857B24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 205035

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 410   aactcgagtgcaggaggatc 429
             ||||||||||||||||||||
Sbjct: 51967 aactcgagtgcaggaggatc 51986
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>dbj|AP001717.1| Homo sapiens genomic DNA, chromosome 21q, section 61/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    ctggatgaaaaggaaacaaa 185
              ||||||||||||||||||||
Sbjct: 197988 ctggatgaaaaggaaacaaa 198007
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>dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, section 20/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 176   aggaaacaaaagggtgaattcctc 199
             ||||| ||||||||||||||||||
Sbjct: 60468 aggaagcaaaagggtgaattcctc 60491
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>emb|AJ872271.1| Thermotoga sp. SG1 16S rRNA gene, 23S rRNA gene, 5S rRNA gene, ORF1
             (partial), ORF2, ORF3, ahcY gene, topG gene, hppa gene,
             acp gene, ORF8, ORF9, priA gene, ORF10, ORF11, ORF12,
             ORF13, ORF14, mrsA gene, ORF16, rrp2 gene, fsr gene,
             ORF19, fbpA gene, fepD gene, sfuC gene, ORF23, ORF24,
             ORF25, gppA gene, tRNA-Ile gene, tRNA-Ala gene, tRNA-Ala
             gene,tRNA-Arg gene, tRNA-His gene, tRNA-Arg gene, tRNA-Gly
             gene, tRNA-Ser gene, tRNA-Arg gene, group I intron, IGS,
             ITS1 and ITS2, strain SG1
          Length = 32997

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 614   ctctttcaatcttttcagtgccaa 637
             |||||||||||||||| |||||||
Sbjct: 11551 ctctttcaatcttttccgtgccaa 11528
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>dbj|AP000566.4| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-102B11, complete
             sequence
          Length = 104542

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 176   aggaaacaaaagggtgaattcctc 199
             ||||| ||||||||||||||||||
Sbjct: 46770 aggaagcaaaagggtgaattcctc 46793
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>emb|AL772237.12| Mouse DNA sequence from clone RP23-14I13 on chromosome 4, complete
             sequence
          Length = 169452

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 495   atggctttgaaatgccattg 514
             ||||||||||||||||||||
Sbjct: 65121 atggctttgaaatgccattg 65140
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>dbj|AK116554.1| Ciona intestinalis cDNA, clone:citb040e17, full insert sequence
          Length = 2207

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 169  gatgaaaaggaaacaaaagg 188
            ||||||||||||||||||||
Sbjct: 1232 gatgaaaaggaaacaaaagg 1251
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 600      gcaagtggggaggcctctttcaat 623
                |||||||| |||||||||||||||
Sbjct: 16765959 gcaagtggtgaggcctctttcaat 16765936
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 411      actcgagtgcaggaggatcccact 434
                |||||| |||||||||||||||||
Sbjct: 12360757 actcgactgcaggaggatcccact 12360780
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>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 163702

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 411    actcgagtgcaggaggatcccact 434
              |||||| |||||||||||||||||
Sbjct: 120752 actcgactgcaggaggatcccact 120775
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>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 132241

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 411  actcgagtgcaggaggatcccact 434
            |||||| |||||||||||||||||
Sbjct: 7865 actcgactgcaggaggatcccact 7888
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>gb|AC004388.1|AC004388 Homo Sapiens Chromosome X clone bWXD306, complete sequence
          Length = 243041

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    gctagctttcctgagcaaaa 48
             ||||||||||||||||||||
Sbjct: 61003 gctagctttcctgagcaaaa 60984
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>emb|AL805982.10| Mouse DNA sequence from clone RP23-119K17 on chromosome X, complete
              sequence
          Length = 166357

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    ggctattgtatacatgaata 253
              ||||||||||||||||||||
Sbjct: 139854 ggctattgtatacatgaata 139873
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>gb|AY865972.1| Saguinus labiatus microRNA mir-22 gene, complete sequence
          Length = 702

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 460 ccgcgctctcacaccctcac 479
           ||||||||||||||||||||
Sbjct: 436 ccgcgctctcacaccctcac 455
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>gb|J03265.1|YSCRBARFA Yeast (S.kluyveri) k-STE2 gene encoding rhodopsin/beta-adrenergic
           receptor, complete cds
          Length = 1560

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 400 ctcagaaacaaactcgagtg 419
           ||||||||||||||||||||
Sbjct: 540 ctcagaaacaaactcgagtg 521
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>dbj|AP000191.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 18/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   ctggatgaaaaggaaacaaa 185
             ||||||||||||||||||||
Sbjct: 16814 ctggatgaaaaggaaacaaa 16833
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>dbj|AP000304.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:T377, complete sequence
          Length = 36781

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   ctggatgaaaaggaaacaaa 185
             ||||||||||||||||||||
Sbjct: 29398 ctggatgaaaaggaaacaaa 29417
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>dbj|AP000115.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 18/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   ctggatgaaaaggaaacaaa 185
             ||||||||||||||||||||
Sbjct: 16814 ctggatgaaaaggaaacaaa 16833


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,829,921
Number of Sequences: 3902068
Number of extensions: 5829921
Number of successful extensions: 108165
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107851
Number of HSP's gapped (non-prelim): 307
length of query: 696
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 673
effective length of database: 17,143,297,704
effective search space: 11537439354792
effective search space used: 11537439354792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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