ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah59l23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT024029.1| Zea mays clone EL01N0421C12 mRNA sequence 137 5e-29
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 103 7e-19
4emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268... 103 7e-19
5dbj|AK106721.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 3e-18
6gb|AY107542.1| Zea mays PCO066796 mRNA sequence 58 4e-05
7gb|AY111333.1| Zea mays CL3351_1 mRNA sequence 46 0.14
8gb|AY105409.1| Zea mays PCO095801 mRNA sequence 46 0.14
9gb|AY129330.1| Mycobacteriopahge Che8, complete sequence 44 0.56
10gb|AC073424.8| Homo sapiens BAC clone RP11-653O17 from 7, comple... 42 2.2
11dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.2
12dbj|AP005668.2| Homo sapiens genomic DNA, chromosome 11 clone:CM... 42 2.2
13dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.2
14emb|CR352227.7| Zebrafish DNA sequence from clone CH211-67C21 in... 42 2.2
15gb|AC133456.11| Mus musculus chromosome 5, clone RP24-465G18, co... 40 8.8
16gb|AC093339.17| Mus musculus chromosome 19, clone RP23-5G6, comp... 40 8.8
17gb|AC121588.2| Mus musculus chromosome 3 clone RP23-275K22, comp... 40 8.8
18ref|XM_475611.1| Oryza sativa (japonica cultivar-group), predic... 40 8.8
19ref|XM_470158.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.8
20gb|AC162902.4| Mus musculus BAC clone RP23-448D23 from chromosom... 40 8.8
21gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, co... 40 8.8
22gb|AC123748.10| Mus musculus chromosome 5, clone RP24-176M16, co... 40 8.8
23gb|AC146377.5| Pan troglodytes BAC clone RP43-79B6 from 7, compl... 40 8.8
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.8
25gb|AC002067.2| Homo sapiens BAC clone CTB-126M9 from 7, complete... 40 8.8
26ref|XM_852461.1| PREDICTED: Canis familiaris similar to epoxide ... 40 8.8
27ref|XM_534566.2| PREDICTED: Canis familiaris similar to epoxide ... 40 8.8
28ref|XM_852378.1| PREDICTED: Canis familiaris similar to epoxide ... 40 8.8
29ref|XM_852337.1| PREDICTED: Canis familiaris similar to epoxide ... 40 8.8
30emb|CR936486.7| Zebrafish DNA sequence from clone DKEY-279C17 in... 40 8.8
31ref|XM_386920.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 8.8
32gb|AC119228.10| Mus musculus chromosome 19, clone RP24-209J17, c... 40 8.8
33gb|AC163283.3| Mus musculus BAC clone RP23-405A16 from chromosom... 40 8.8
34emb|AL445586.6| Human DNA sequence from clone RP11-352F21 on chr... 40 8.8
35emb|AL354798.13| Human DNA sequence from clone RP11-756A22 on ch... 40 8.8
36gb|AC164576.4| Mus musculus 10 BAC RP23-50F14 (Roswell Park Canc... 40 8.8
37gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, co... 40 8.8
38gb|AC009166.4| Homo sapiens chromosome 16 clone RP11-80B1, compl... 40 8.8
39gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genom... 40 8.8
40gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, comp... 40 8.8
41gb|AC087456.3| Homo sapiens chromosome 15, clone RP11-26A13, com... 40 8.8
42gb|AC155312.2| Mus musculus BAC clone RP23-411F11 from chromosom... 40 8.8
43gb|AC113889.6| Rattus norvegicus 2 BAC CH230-337K18 (Children's ... 40 8.8
44gb|AC153485.9| Mus musculus 10 BAC RP23-319B13 (Roswell Park Can... 40 8.8
45dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
46dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
47gb|AC138972.8| Homo sapiens 3 BAC RP11-1005I1 (Roswell Park Canc... 40 8.8
48gb|AC007498.7| Homo sapiens chromosome 16 clone RP11-424K7, comp... 40 8.8
49gb|AF094698.1|AF094698 Sphoeroides nephelus immune-type receptor... 40 8.8
50gb|AC140936.1| Gallus gallus chromosome UNK clone TAM31-90P6, co... 40 8.8
51dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.8
52gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genom... 40 8.8
53dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 8.8
54emb|BX005320.4| Zebrafish DNA sequence from clone DKEY-27P3, com... 40 8.8
55dbj|AK108175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
56dbj|AK100515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
57dbj|AK063239.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
58emb|AL928855.7| Mouse DNA sequence from clone RP23-452C10 on chr... 40 8.8
59gb|AC133513.3| Mus musculus BAC clone RP23-212E9 from 12, comple... 40 8.8
60emb|AL627425.15| Mouse DNA sequence from clone RP23-283L16 on ch... 40 8.8
61gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8 
>gb|BT024029.1| Zea mays clone EL01N0421C12 mRNA sequence
          Length = 1073

 Score =  137 bits (69), Expect = 5e-29
 Identities = 140/164 (85%)
 Strand = Plus / Minus

                                                                       
Query: 482 cggtagtagttgaggggtcctgtgaagccagacttctgaaacttctcggcatactgcccc 541
           |||||||||||||||||||| ||||| ||| ||||    ||||| ||||| ||||| |||
Sbjct: 664 cggtagtagttgaggggtccagtgaacccaaactttccgaacttttcggcgtactggccc 605

                                                                       
Query: 542 agttcttcctcggacatccaaggaagtggggatgatgatgcctcgaaaaaatctatgatc 601
           ||||||||||||   |||||||||||||| ||||  |||||||||| ||| |||||||||
Sbjct: 604 agttcttcctcgctgatccaaggaagtggtgatggagatgcctcgagaaagtctatgatc 545

                                                       
Query: 602 tctactccaggaggagcagcaaggncatctaattcaatggagta 645
           || ||||||||||||||||  ||  |||||| ||||||||||||
Sbjct: 544 tccactccaggaggagcagtgagttcatctatttcaatggagta 501



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 124/153 (81%)
 Strand = Plus / Minus

                                                                       
Query: 177 tatctcagagttcaccctctcggcctgctcttgctggaggaaatggtggccttcaatgat 236
           |||||| || ||||||||||||||||| |||||  |||| |||||| |||||||||||| 
Sbjct: 893 tatctccgaattcaccctctcggcctgttcttgggggagaaaatgggggccttcaatgac 834

                                                                       
Query: 237 ggatacctcaaggtctggaacattggacttgaaacccccgctttcgatgtagctcttaac 296
           ||  || ||||| ||||| |||  ||| |||||  |||| || | ||||||  ||| |||
Sbjct: 833 ggggacttcaagatctgggacaggggatttgaattccccactcttgatgtacttctcaac 774

                                            
Query: 297 tccgaaggactcgaccccgatgtccttctcacc 329
            || ||||||| ||| ||||||||||| |||||
Sbjct: 773 cccaaaggactggacaccgatgtccttatcacc 741
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  103 bits (52), Expect = 7e-19
 Identities = 124/148 (83%)
 Strand = Plus / Plus

                                                                            
Query: 465      tttacatgtccatgttacggtagtagttgaggggtcctgtgaagccagacttctgaaact 524
                ||||| |||||||  | ||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 27323247 tttacgtgtccatcatgcggtagtagttgatgggtcctgtgaacccagacttctgaaact 27323306

                                                                            
Query: 525      tctcggcatactgccccagttcttcctcggacatccaaggaagtggggatgatgatgcct 584
                | || || ||||| || |||||||||||||| ||||| ||||| || |  ||   |||||
Sbjct: 27323307 tttccgcgtactggccaagttcttcctcggagatccatggaagcggtgtcgaacgtgcct 27323366

                                            
Query: 585      cgaaaaaatctatgatctctactccagg 612
                | | ||| ||||||||||| ||||||||
Sbjct: 27323367 caagaaagtctatgatctccactccagg 27323394



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                            
Query: 170      aggacagtatctcagagttcaccctctcggcctgctcttgctggaggaaatggtggcctt 229
                |||||| |||||| || ||||| |||||||||||||||||||||| ||||||||| ||||
Sbjct: 27322952 aggacaatatctccgaattcactctctcggcctgctcttgctggatgaaatggtgacctt 27323011

                                                         
Query: 230      caatgatggatacctcaaggtctggaacattggacttgaaa 270
                ||||||||   |||||||| | ||||||   ||||||||||
Sbjct: 27323012 caatgatgacaacctcaagatttggaacgacggacttgaaa 27323052



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 367      tgccacggtgcagtaagcctccagttcctg 396
                ||||| ||||||||||||||||| ||||||
Sbjct: 27323149 tgccagggtgcagtaagcctccaattcctg 27323178
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  103 bits (52), Expect = 7e-19
 Identities = 124/148 (83%)
 Strand = Plus / Plus

                                                                            
Query: 465      tttacatgtccatgttacggtagtagttgaggggtcctgtgaagccagacttctgaaact 524
                ||||| |||||||  | ||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 27248847 tttacgtgtccatcatgcggtagtagttgatgggtcctgtgaacccagacttctgaaact 27248906

                                                                            
Query: 525      tctcggcatactgccccagttcttcctcggacatccaaggaagtggggatgatgatgcct 584
                | || || ||||| || |||||||||||||| ||||| ||||| || |  ||   |||||
Sbjct: 27248907 tttccgcgtactggccaagttcttcctcggagatccatggaagcggtgtcgaacgtgcct 27248966

                                            
Query: 585      cgaaaaaatctatgatctctactccagg 612
                | | ||| ||||||||||| ||||||||
Sbjct: 27248967 caagaaagtctatgatctccactccagg 27248994



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                            
Query: 170      aggacagtatctcagagttcaccctctcggcctgctcttgctggaggaaatggtggcctt 229
                |||||| |||||| || ||||| |||||||||||||||||||||| ||||||||| ||||
Sbjct: 27248552 aggacaatatctccgaattcactctctcggcctgctcttgctggatgaaatggtgacctt 27248611

                                                         
Query: 230      caatgatggatacctcaaggtctggaacattggacttgaaa 270
                ||||||||   |||||||| | ||||||   ||||||||||
Sbjct: 27248612 caatgatgacaacctcaagatttggaacgacggacttgaaa 27248652



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 367      tgccacggtgcagtaagcctccagttcctg 396
                ||||| ||||||||||||||||| ||||||
Sbjct: 27248749 tgccagggtgcagtaagcctccaattcctg 27248778
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>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 146585

 Score =  103 bits (52), Expect = 7e-19
 Identities = 124/148 (83%)
 Strand = Plus / Plus

                                                                          
Query: 465    tttacatgtccatgttacggtagtagttgaggggtcctgtgaagccagacttctgaaact 524
              ||||| |||||||  | ||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 136279 tttacgtgtccatcatgcggtagtagttgatgggtcctgtgaacccagacttctgaaact 136338

                                                                          
Query: 525    tctcggcatactgccccagttcttcctcggacatccaaggaagtggggatgatgatgcct 584
              | || || ||||| || |||||||||||||| ||||| ||||| || |  ||   |||||
Sbjct: 136339 tttccgcgtactggccaagttcttcctcggagatccatggaagcggtgtcgaacgtgcct 136398

                                          
Query: 585    cgaaaaaatctatgatctctactccagg 612
              | | ||| ||||||||||| ||||||||
Sbjct: 136399 caagaaagtctatgatctccactccagg 136426



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                          
Query: 170    aggacagtatctcagagttcaccctctcggcctgctcttgctggaggaaatggtggcctt 229
              |||||| |||||| || ||||| |||||||||||||||||||||| ||||||||| ||||
Sbjct: 135984 aggacaatatctccgaattcactctctcggcctgctcttgctggatgaaatggtgacctt 136043

                                                       
Query: 230    caatgatggatacctcaaggtctggaacattggacttgaaa 270
              ||||||||   |||||||| | ||||||   ||||||||||
Sbjct: 136044 caatgatgacaacctcaagatttggaacgacggacttgaaa 136084



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 367    tgccacggtgcagtaagcctccagttcctg 396
              ||||| ||||||||||||||||| ||||||
Sbjct: 136181 tgccagggtgcagtaagcctccaattcctg 136210
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>dbj|AK106721.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-G08, full
           insert sequence
          Length = 1215

 Score =  101 bits (51), Expect = 3e-18
 Identities = 111/131 (84%)
 Strand = Plus / Minus

                                                                       
Query: 482 cggtagtagttgaggggtcctgtgaagccagacttctgaaacttctcggcatactgcccc 541
           ||||||||||||| |||||||||||| ||||||||||||||||| || || ||||| || 
Sbjct: 717 cggtagtagttgatgggtcctgtgaacccagacttctgaaacttttccgcgtactggcca 658

                                                                       
Query: 542 agttcttcctcggacatccaaggaagtggggatgatgatgcctcgaaaaaatctatgatc 601
           |||||||||||||| ||||| ||||| || |  ||   |||||| | ||| |||||||||
Sbjct: 657 agttcttcctcggagatccatggaagcggtgtcgaacgtgcctcaagaaagtctatgatc 598

                      
Query: 602 tctactccagg 612
           || ||||||||
Sbjct: 597 tccactccagg 587



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                       
Query: 170 aggacagtatctcagagttcaccctctcggcctgctcttgctggaggaaatggtggcctt 229
           |||||| |||||| || ||||| |||||||||||||||||||||| ||||||||| ||||
Sbjct: 953 aggacaatatctccgaattcactctctcggcctgctcttgctggatgaaatggtgacctt 894

                                                    
Query: 230 caatgatggatacctcaaggtctggaacattggacttgaaa 270
           ||||||||   |||||||| | ||||||   ||||||||||
Sbjct: 893 caatgatgacaacctcaagatttggaacgacggacttgaaa 853
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>gb|AY107542.1| Zea mays PCO066796 mRNA sequence
          Length = 519

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 482 cggtagtagttgaggggtcctgtgaagcc 510
           |||||||||||||||||||||||||||||
Sbjct: 29  cggtagtagttgaggggtcctgtgaagcc 1



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Minus

                                                                       
Query: 156 aaacttgtccaggaaggacagtatctcagagttcaccctctcggcctgctcttgctggag 215
           ||||||| | |||||||| ||||| || || |||||  || ||||||  || ||||||| 
Sbjct: 279 aaacttgccaaggaaggagagtatttccgaattcactgtcccggcctcttcctgctggac 220

                                                     
Query: 216 gaaatggtggccttcaatgatggatacctcaaggtctggaac 257
           ||||||||| || || ||||| || | |||||||||||||||
Sbjct: 219 gaaatggtgcccctcgatgatcgaaatctcaaggtctggaac 178
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>gb|AY111333.1| Zea mays CL3351_1 mRNA sequence
          Length = 604

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 178 atctcagagttcaccctctcggcctgc 204
           ||||| |||||||||||||||||||||
Sbjct: 362 atctccgagttcaccctctcggcctgc 388
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>gb|AY105409.1| Zea mays PCO095801 mRNA sequence
          Length = 741

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 472 gtccatgttacggtagtagttgaggggtcctgtgaagcc 510
           ||||||||| ||||||||||||| ||| || ||||||||
Sbjct: 375 gtccatgttgcggtagtagttgatgggccccgtgaagcc 337
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>gb|AY129330.1| Mycobacteriopahge Che8, complete sequence
          Length = 59471

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 313   ccgatgtccttctcacccccgatgaa 338
             ||||||||||||||||| ||||||||
Sbjct: 37432 ccgatgtccttctcaccgccgatgaa 37457
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>gb|AC073424.8| Homo sapiens BAC clone RP11-653O17 from 7, complete sequence
          Length = 191141

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 57    aatgtaaaaccagctcattattaca 81
             ||||||||||| |||||||||||||
Sbjct: 20342 aatgtaaaacctgctcattattaca 20366
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>dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7_A, complete
              sequence
          Length = 118828

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 23     tttgtatttcagtttagaaaa 43
              |||||||||||||||||||||
Sbjct: 109292 tttgtatttcagtttagaaaa 109312
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>dbj|AP005668.2| Homo sapiens genomic DNA, chromosome 11 clone:CMF9-412N3, complete
            sequence
          Length = 39955

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 23   tttgtatttcagtttagaaaa 43
            |||||||||||||||||||||
Sbjct: 4231 tttgtatttcagtttagaaaa 4251
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>dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7, complete
              sequence
          Length = 150474

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 23     tttgtatttcagtttagaaaa 43
              |||||||||||||||||||||
Sbjct: 109292 tttgtatttcagtttagaaaa 109312
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>emb|CR352227.7| Zebrafish DNA sequence from clone CH211-67C21 in linkage group 10,
              complete sequence
          Length = 168407

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 157    aacttgtccaggaaggacagt 177
              |||||||||||||||||||||
Sbjct: 142184 aacttgtccaggaaggacagt 142204
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>gb|AC133456.11| Mus musculus chromosome 5, clone RP24-465G18, complete sequence
          Length = 162210

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 446    aagaatataagtaatgaagt 465
              ||||||||||||||||||||
Sbjct: 159457 aagaatataagtaatgaagt 159438
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>gb|AC093339.17| Mus musculus chromosome 19, clone RP23-5G6, complete sequence
          Length = 218747

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     tattacactatccttttact 94
              ||||||||||||||||||||
Sbjct: 194956 tattacactatccttttact 194975
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>gb|AC121588.2| Mus musculus chromosome 3 clone RP23-275K22, complete sequence
          Length = 189679

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 342    tgcaggcaccgtgatctttg 361
              ||||||||||||||||||||
Sbjct: 127168 tgcaggcaccgtgatctttg 127149
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>ref|XM_475611.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1566

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 393  cctgtgtttgacgtggattt 412
            ||||||||||||||||||||
Sbjct: 1051 cctgtgtttgacgtggattt 1070
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>ref|XM_470158.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1017

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 471 tgtccatgttacggtagtagttga 494
           |||||||||| |||||||||||||
Sbjct: 754 tgtccatgttgcggtagtagttga 731
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>gb|AC162902.4| Mus musculus BAC clone RP23-448D23 from chromosome 12, complete
            sequence
          Length = 190357

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   tccttttactcagttctcag 104
            ||||||||||||||||||||
Sbjct: 5091 tccttttactcagttctcag 5110
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>gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, complete sequence
          Length = 172490

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    aacttttacaatgtaaaaccagct 71
             ||||||||||||| ||||||||||
Sbjct: 63687 aacttttacaatgaaaaaccagct 63710
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>gb|AC123748.10| Mus musculus chromosome 5, clone RP24-176M16, complete sequence
          Length = 158365

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 446    aagaatataagtaatgaagt 465
              ||||||||||||||||||||
Sbjct: 130657 aagaatataagtaatgaagt 130676
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>gb|AC146377.5| Pan troglodytes BAC clone RP43-79B6 from 7, complete sequence
          Length = 195459

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    cctgctcttgctggaggaaa 219
              ||||||||||||||||||||
Sbjct: 129192 cctgctcttgctggaggaaa 129211
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 471      tgtccatgttacggtagtagttga 494
                |||||||||| |||||||||||||
Sbjct: 34522055 tgtccatgttgcggtagtagttga 34522078
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>gb|AC002067.2| Homo sapiens BAC clone CTB-126M9 from 7, complete sequence
          Length = 162912

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    cctgctcttgctggaggaaa 219
              ||||||||||||||||||||
Sbjct: 102947 cctgctcttgctggaggaaa 102966
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>ref|XM_852461.1| PREDICTED: Canis familiaris similar to epoxide hydrolase 2,
            cytoplasmic, transcript variant 4 (LOC477373), mRNA
          Length = 2096

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 489  agttgaggggtcctgtgaagccagacttctgaaact 524
            |||||||||| ||| |||| ||||||||||| ||||
Sbjct: 1443 agttgaggggacctctgaaaccagacttctggaact 1408
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>ref|XM_534566.2| PREDICTED: Canis familiaris similar to epoxide hydrolase 2,
            cytoplasmic, transcript variant 1 (LOC477373), mRNA
          Length = 2102

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 489  agttgaggggtcctgtgaagccagacttctgaaact 524
            |||||||||| ||| |||| ||||||||||| ||||
Sbjct: 1449 agttgaggggacctctgaaaccagacttctggaact 1414
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>ref|XM_852378.1| PREDICTED: Canis familiaris similar to epoxide hydrolase 2,
            cytoplasmic, transcript variant 3 (LOC477373), mRNA
          Length = 2099

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 489  agttgaggggtcctgtgaagccagacttctgaaact 524
            |||||||||| ||| |||| ||||||||||| ||||
Sbjct: 1446 agttgaggggacctctgaaaccagacttctggaact 1411
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>ref|XM_852337.1| PREDICTED: Canis familiaris similar to epoxide hydrolase 2,
            cytoplasmic, transcript variant 2 (LOC477373), mRNA
          Length = 2102

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 489  agttgaggggtcctgtgaagccagacttctgaaact 524
            |||||||||| ||| |||| ||||||||||| ||||
Sbjct: 1449 agttgaggggacctctgaaaccagacttctggaact 1414
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>emb|CR936486.7| Zebrafish DNA sequence from clone DKEY-279C17 in linkage group 5,
             complete sequence
          Length = 90069

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 31    tcagtttagaaaaagacaactttt 54
             ||||||||||||| ||||||||||
Sbjct: 75822 tcagtttagaaaatgacaactttt 75799
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>ref|XM_386920.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06744.1)
           partial mRNA
          Length = 1035

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 482 cggtagtagttgaggggtcc 501
           ||||||||||||||||||||
Sbjct: 758 cggtagtagttgaggggtcc 739
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>gb|AC119228.10| Mus musculus chromosome 19, clone RP24-209J17, complete sequence
          Length = 168362

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     tattacactatccttttact 94
              ||||||||||||||||||||
Sbjct: 115687 tattacactatccttttact 115668
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>gb|AC163283.3| Mus musculus BAC clone RP23-405A16 from chromosome 12, complete sequence
          Length = 197540

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     tccttttactcagttctcag 104
              ||||||||||||||||||||
Sbjct: 186113 tccttttactcagttctcag 186132
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>emb|AL445586.6| Human DNA sequence from clone RP11-352F21 on chromosome 9, complete
             sequence
          Length = 198498

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    ttagaaaaagacaactttta 55
             ||||||||||||||||||||
Sbjct: 37110 ttagaaaaagacaactttta 37091
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>emb|AL354798.13| Human DNA sequence from clone RP11-756A22 on chromosome 13 Contains the
             3' end of a novel gene, the CENJP gene for centromere
             protein J (LAP, CPAP, LIP1, BM032), 2 novel genes, a
             pseudogene similar to part of solute carrier family 25
             (mitochondrial carrier; ornithine transporter) member 15
             (SLC25A15), a TPTE and PTEN homologous inositol lipid
             phosphatase (TPIP) pseudogene, a 60S ribisomal protein L34
             (RPL34) pseudogene and 2 CpG islands, complete sequence
          Length = 167319

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 444   ggaagaatataagtaatgaagttt 467
             ||||||||| ||||||||||||||
Sbjct: 18879 ggaagaatagaagtaatgaagttt 18902
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>gb|AC164576.4| Mus musculus 10 BAC RP23-50F14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205209

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   gatggatacctcaaggtctg 253
             ||||||||||||||||||||
Sbjct: 96944 gatggatacctcaaggtctg 96963
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>gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, complete sequence
          Length = 180202

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 560   caaggaagtggggatgatga 579
             ||||||||||||||||||||
Sbjct: 42869 caaggaagtggggatgatga 42850
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>gb|AC009166.4| Homo sapiens chromosome 16 clone RP11-80B1, complete sequence
          Length = 174550

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 486   agtagttgaggggtcctgtg 505
             ||||||||||||||||||||
Sbjct: 32528 agtagttgaggggtcctgtg 32509
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>gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genomic sequence,
            complete sequence
          Length = 117505

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 471  tgtccatgttacggtagtagttga 494
            |||||||||| |||||||||||||
Sbjct: 4112 tgtccatgttgcggtagtagttga 4089
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>gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, complete sequence
          Length = 228283

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 48     aacttttacaatgtaaaaccagct 71
              ||||||||||||| ||||||||||
Sbjct: 152124 aacttttacaatgaaaaaccagct 152147
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>gb|AC087456.3| Homo sapiens chromosome 15, clone RP11-26A13, complete sequence
          Length = 170945

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   caaggaagtggggatgatga 579
             ||||||||||||||||||||
Sbjct: 27896 caaggaagtggggatgatga 27915
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>gb|AC155312.2| Mus musculus BAC clone RP23-411F11 from chromosome 12, complete
             sequence
          Length = 197795

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    tccttttactcagttctcag 104
             ||||||||||||||||||||
Sbjct: 92656 tccttttactcagttctcag 92675
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>gb|AC113889.6| Rattus norvegicus 2 BAC CH230-337K18 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 148510

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 588   aaaaatctatgatctctact 607
             ||||||||||||||||||||
Sbjct: 42896 aaaaatctatgatctctact 42915
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>gb|AC153485.9| Mus musculus 10 BAC RP23-319B13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 213412

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    gatggatacctcaaggtctg 253
              ||||||||||||||||||||
Sbjct: 191472 gatggatacctcaaggtctg 191491
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 393     cctgtgtttgacgtggattt 412
               ||||||||||||||||||||
Sbjct: 3311267 cctgtgtttgacgtggattt 3311286
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 471      tgtccatgttacggtagtagttga 494
                |||||||||| |||||||||||||
Sbjct: 34612127 tgtccatgttgcggtagtagttga 34612150
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>gb|AC138972.8| Homo sapiens 3 BAC RP11-1005I1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 137843

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    taaaaccagctcattattac 80
             ||||||||||||||||||||
Sbjct: 54488 taaaaccagctcattattac 54469
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>gb|AC007498.7| Homo sapiens chromosome 16 clone RP11-424K7, complete sequence
          Length = 176248

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 486  agtagttgaggggtcctgtg 505
            ||||||||||||||||||||
Sbjct: 3202 agtagttgaggggtcctgtg 3183
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>gb|AF094698.1|AF094698 Sphoeroides nephelus immune-type receptor 1-5, 7 and 9-26 genes,
             complete cds and immune-type receptor 6 and 8,
             pseudogenes, complete sequence
          Length = 113426

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    acaacttttacaatgtaaaa 65
             ||||||||||||||||||||
Sbjct: 10188 acaacttttacaatgtaaaa 10169
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>gb|AC140936.1| Gallus gallus chromosome UNK clone TAM31-90P6, complete sequence
          Length = 89690

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   tggtggccttcaatgatgga 239
             ||||||||||||||||||||
Sbjct: 80994 tggtggccttcaatgatgga 80975
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 534  actgccccagttcttcctcggaca 557
            ||||| ||||||||||||||||||
Sbjct: 4477 actgcgccagttcttcctcggaca 4454
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>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete
              sequence
          Length = 129302

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 471    tgtccatgttacggtagtagttga 494
              |||||||||| |||||||||||||
Sbjct: 121278 tgtccatgttgcggtagtagttga 121255
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 202     tgctcttgctggaggaaatg 221
               ||||||||||||||||||||
Sbjct: 2534267 tgctcttgctggaggaaatg 2534286
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>emb|BX005320.4| Zebrafish DNA sequence from clone DKEY-27P3, complete sequence
          Length = 142827

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    gaaaaagacaacttttacaa 58
             ||||||||||||||||||||
Sbjct: 18718 gaaaaagacaacttttacaa 18737
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>dbj|AK108175.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-A05, full
           insert sequence
          Length = 1264

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 471 tgtccatgttacggtagtagttga 494
           |||||||||| |||||||||||||
Sbjct: 825 tgtccatgttgcggtagtagttga 802
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>dbj|AK100515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100B19, full
            insert sequence
          Length = 2699

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 471  tgtccatgttacggtagtagttga 494
            |||||||||| |||||||||||||
Sbjct: 2393 tgtccatgttgcggtagtagttga 2370
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>dbj|AK063239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-G02, full
           insert sequence
          Length = 1293

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 471 tgtccatgttacggtagtagttga 494
           |||||||||| |||||||||||||
Sbjct: 825 tgtccatgttgcggtagtagttga 802
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>emb|AL928855.7| Mouse DNA sequence from clone RP23-452C10 on chromosome 2, complete
              sequence
          Length = 196567

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 446    aagaatataagtaatgaagt 465
              ||||||||||||||||||||
Sbjct: 100521 aagaatataagtaatgaagt 100502
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>gb|AC133513.3| Mus musculus BAC clone RP23-212E9 from 12, complete sequence
          Length = 177034

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     acaacttttacaatgtaaaa 65
              ||||||||||||||||||||
Sbjct: 142095 acaacttttacaatgtaaaa 142114
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>emb|AL627425.15| Mouse DNA sequence from clone RP23-283L16 on chromosome 4, complete
             sequence
          Length = 226967

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   ctcaccagcttagttcttag 135
             ||||||||||||||||||||
Sbjct: 14338 ctcaccagcttagttcttag 14319
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>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05,
              complete sequence
          Length = 167317

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 393    cctgtgtttgacgtggattt 412
              ||||||||||||||||||||
Sbjct: 105091 cctgtgtttgacgtggattt 105110


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,701,439
Number of Sequences: 3902068
Number of extensions: 5701439
Number of successful extensions: 108188
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107897
Number of HSP's gapped (non-prelim): 290
length of query: 645
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 622
effective length of database: 17,143,297,704
effective search space: 10663131171888
effective search space used: 10663131171888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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