>gb|AC153997.3| Mus musculus 6 BAC RP24-571G22 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 150676

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 81    acacaaaacattccacatggca 102
             ||||||||||||||||||||||
Sbjct: 37830 acacaaaacattccacatggca 37851

>gb|AC104616.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0079H13 map E60284SA, complete sequence
          Length = 116863

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 199   tgacactagcgtccaaattctattt 223
             ||||||||||||| |||||||||||
Sbjct: 54123 tgacactagcgtcaaaattctattt 54147

>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0038H12 map E60284SA, complete sequence
          Length = 139190

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 199   tgacactagcgtccaaattctattt 223
             ||||||||||||| |||||||||||
Sbjct: 98294 tgacactagcgtcaaaattctattt 98270

>gb|AC157517.2| Mus musculus BAC clone RP24-69C11 from chromosome 9, complete sequence
          Length = 189253

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 298   cacaaacaccaccacagacct 318
             |||||||||||||||||||||
Sbjct: 49566 cacaaacaccaccacagacct 49586

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 199     tgacactagcgtccaaattctattt 223
               ||||||||||||| |||||||||||
Sbjct: 5825571 tgacactagcgtcaaaattctattt 5825595

>gb|AC073436.62| Mus musculus strain C57BL/6J chromosome 2 clone rp23-50k8, complete
              sequence
          Length = 203901

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 74     aacaaagacacaaaacattcc 94
              |||||||||||||||||||||
Sbjct: 170833 aacaaagacacaaaacattcc 170813

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 199     tgacactagcgtccaaattctattt 223
               ||||||||||||| |||||||||||
Sbjct: 5826320 tgacactagcgtcaaaattctattt 5826344

>emb|AL772265.5| Mouse DNA sequence from clone RP23-2D7 on chromosome 2, complete
             sequence
          Length = 212009

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 74    aacaaagacacaaaacattcc 94
             |||||||||||||||||||||
Sbjct: 50858 aacaaagacacaaaacattcc 50838

>gb|AC005736.1| Homo sapiens chromosome 16, BAC clone 462G18 (LANL), complete sequence
          Length = 215441

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    aaaacattccacatggcaac 104
             ||||||||||||||||||||
Sbjct: 61090 aaaacattccacatggcaac 61071

>gb|AC004753.1| Homo sapiens chromosome 16, cosmid clone RT272 (LANL), complete
           sequence
          Length = 30652

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 85  aaaacattccacatggcaac 104
           ||||||||||||||||||||
Sbjct: 93  aaaacattccacatggcaac 112

>gb|AC145512.33| Medicago truncatula clone mth2-19o18, complete sequence
          Length = 145524

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 12     taaatcaaatgctaaaaatcagat 35
              |||| |||||||||||||||||||
Sbjct: 112435 taaaacaaatgctaaaaatcagat 112458

>gb|AC121082.13| Mus musculus chromosome 7, clone RP23-32F14, complete sequence
          Length = 231678

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 266    catgcctgacattagaaggagtca 289
              ||||||||||| ||||||||||||
Sbjct: 150176 catgcctgacaatagaaggagtca 150153

>gb|AC141865.27| Medicago truncatula clone mth2-7b19, complete sequence
          Length = 117380

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    taaatcaaatgctaaaaatcagat 35
             |||| |||||||||||||||||||
Sbjct: 15133 taaaacaaatgctaaaaatcagat 15110

>gb|AC153002.15| Medicago truncatula clone mth2-95m8, complete sequence
          Length = 112714

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 12    taaatcaaatgctaaaaatcagat 35
             |||| |||||||||||||||||||
Sbjct: 19348 taaaacaaatgctaaaaatcagat 19371

>gb|AC140067.14| Medicago truncatula clone mth2-25n14, complete sequence
          Length = 116196

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    taaatcaaatgctaaaaatcagat 35
             |||| |||||||||||||||||||
Sbjct: 15131 taaaacaaatgctaaaaatcagat 15108

>emb|CR407567.2| Human DNA sequence from clone RP11-312O7 on chromosome 1 Contains a
             novel gene (MGC57827) and a CpG island, complete sequence
          Length = 90590

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   ataaggctatgtagtttgta 346
             ||||||||||||||||||||
Sbjct: 52468 ataaggctatgtagtttgta 52487

>emb|AL390374.16| Human DNA sequence from clone CTD-2182L9 on chromosome 20 Contains part
             of a novel gene (KIAA0964) and two CpG islands, complete
             sequence
          Length = 65831

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    tctacacaggtactgcacca 60
             ||||||||||||||||||||
Sbjct: 11272 tctacacaggtactgcacca 11253

>emb|AL390877.9| Human DNA sequence from clone RP11-134N8 on chromosome 1 Contains a
              proline-rich nuclear receptor coactivator 2 (PNRC2)
              pseudogene, complete sequence
          Length = 149598

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 11     ctaaatcaaatgctaaaaatcaga 34
              |||||||||||| |||||||||||
Sbjct: 142553 ctaaatcaaatgataaaaatcaga 142576

>emb|AL357493.8| Human DNA sequence from clone RP11-439A17 on chromosome 1 Contains four
             novel genes, a novel gene (MGC57827), a ribosomal protein
             L22 (RPL22) pseudogene, a histone 2 H3c (HIST2H3C)
             pseudogene, the HIST2H2BB gene for histone 2 H2bb, the
             FCGR1B gene for Fc fragment of IgG high affinity Ib
             receptor for (CD64) and three CpG islands, complete
             sequence
          Length = 189539

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   ataaggctatgtagtttgta 346
             ||||||||||||||||||||
Sbjct: 78523 ataaggctatgtagtttgta 78542

>emb|AL354995.13| Human DNA sequence from clone RP11-512J14 on chromosome 13 Contains the
              3' end of the DACH gene for dachshund homolog (Drosophila)
              (DACH1, FLJ10138), complete sequence
          Length = 149582

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     ctaaatcaaatgctaaaaat 30
              ||||||||||||||||||||
Sbjct: 125084 ctaaatcaaatgctaaaaat 125103

>emb|AL672181.11| Mouse DNA sequence from clone RP23-223D16 on chromosome 11, complete
             sequence
          Length = 181460

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 72    gaaacaaagacacaaaacattccacatggcaa 103
             |||| ||||| | |||||||||||||||||||
Sbjct: 18075 gaaagaaagaaagaaaacattccacatggcaa 18106

>emb|CR589922.3| Human DNA sequence from clone WI2-2158M6 on chromosome 1, complete
            sequence
          Length = 43380

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  ataaggctatgtagtttgta 346
            ||||||||||||||||||||
Sbjct: 7774 ataaggctatgtagtttgta 7793

>emb|CR589924.4| Human DNA sequence from clone WI2-929E21 on chromosome 1, complete
             sequence
          Length = 42303

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   ataaggctatgtagtttgta 346
             ||||||||||||||||||||
Sbjct: 25231 ataaggctatgtagtttgta 25212

>ref|NM_168743.2| Drosophila melanogaster CG32177-PA (CG32177) mRNA, complete cds
          Length = 2093

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   tgaaacaaagacacaaaaca 90
            ||||||||||||||||||||
Sbjct: 1756 tgaaacaaagacacaaaaca 1775

>gb|AC010054.7| Drosophila melanogaster 3L BAC RP98-15E10 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 173109

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    tgaaacaaagacacaaaaca 90
             ||||||||||||||||||||
Sbjct: 81844 tgaaacaaagacacaaaaca 81825

>gb|AY069849.1| Drosophila melanogaster SD09769 full length cDNA
          Length = 2107

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   tgaaacaaagacacaaaaca 90
            ||||||||||||||||||||
Sbjct: 1731 tgaaacaaagacacaaaaca 1750

>gb|AC154839.3| Mus musculus BAC clone RP23-61L24 from chromosome 13, complete sequence
          Length = 209819

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     agacacaaaacattccacat 98
              ||||||||||||||||||||
Sbjct: 200407 agacacaaaacattccacat 200426

>gb|AC155301.2| Mus musculus BAC clone RP24-216J21 from chromosome 13, complete sequence
          Length = 192299

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     agacacaaaacattccacat 98
              ||||||||||||||||||||
Sbjct: 108724 agacacaaaacattccacat 108743

>emb|AL109844.14|HSJ636L22 Human DNA sequence from clone RP4-636L22 on chromosome 1, complete
             sequence
          Length = 136815

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   ataaggctatgtagtttgta 346
             ||||||||||||||||||||
Sbjct: 81402 ataaggctatgtagtttgta 81421

>gb|AC154517.2| Mus musculus BAC clone RP24-85L11 from chromosome 12, complete sequence
          Length = 167631

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 246    gttgcacgttatgtacactgcatg 269
              |||||| |||||||||||||||||
Sbjct: 166863 gttgcatgttatgtacactgcatg 166840

>dbj|BS000090.1| Pan troglodytes chromosome 22 clone:PTB-057C10, map 22, complete
             sequences
          Length = 158351

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    agatccccttctacacaggt 51
             ||||||||||||||||||||
Sbjct: 40670 agatccccttctacacaggt 40689

>dbj|BS000089.1| Pan troglodytes chromosome 22 clone:PTB-054B14, map 22, complete
              sequences
          Length = 139076

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     agatccccttctacacaggt 51
              ||||||||||||||||||||
Sbjct: 111327 agatccccttctacacaggt 111346

>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the complete
              sequence
          Length = 290640

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     tgaaacaaagacacaaaaca 90
              ||||||||||||||||||||
Sbjct: 160738 tgaaacaaagacacaaaaca 160719

>gb|AC154565.2| Mus musculus BAC clone RP23-403J19 from chromosome 16, complete
             sequence
          Length = 202981

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    atcaaatgctaaaaatcaga 34
             ||||||||||||||||||||
Sbjct: 87350 atcaaatgctaaaaatcaga 87331

>emb|CT010471.11| Mouse DNA sequence from clone RP23-20A5 on chromosome 13, complete
             sequence
          Length = 219145

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    agacacaaaacattccacat 98
             ||||||||||||||||||||
Sbjct: 75435 agacacaaaacattccacat 75454

>gb|AC132240.3| Mus musculus BAC clone RP24-411A22 from 3, complete sequence
          Length = 182978

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     tctgaaacaaagacacaaaa 88
              ||||||||||||||||||||
Sbjct: 130713 tctgaaacaaagacacaaaa 130732

>emb|CT030206.8| Mouse DNA sequence from clone RP23-100I15 on chromosome 12, complete
             sequence
          Length = 201135

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 246   gttgcacgttatgtacactgcatg 269
             |||||| |||||||||||||||||
Sbjct: 25858 gttgcatgttatgtacactgcatg 25835


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,133,125
Number of Sequences: 3902068
Number of extensions: 3133125
Number of successful extensions: 59537
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59461
Number of HSP's gapped (non-prelim): 76
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)