ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah59k23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 509 e-141
2ref|NM_185419.2| Oryza sativa (japonica cultivar-group), mRNA 280 4e-72
3dbj|AK101334.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 4e-72
4dbj|AK062098.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 4e-72
5dbj|AK060117.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 4e-72
6gb|AY675582.1| Zea mays RuBisCo subunit binding-protein beta sub... 214 2e-52
7gb|AY103778.1| Zea mays PCO063180 mRNA sequence 214 2e-52
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
9dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
10ref|NM_179480.1| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA... 113 5e-22
11ref|NM_104424.2| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA... 113 5e-22
12gb|AY081501.1| Arabidopsis thaliana Rubisco subunit binding-prot... 113 5e-22
13gb|AF386945.1|AF386945 Arabidopsis thaliana Rubisco subunit bind... 113 5e-22
14emb|BX814891.1|CNS0ADZ4 Arabidopsis thaliana Full-length cDNA Co... 105 1e-19
15gb|M35600.1|BNA60CPNB B.napus plastid 60-kDa chaperonin-60 beta-... 103 5e-19
16ref|XM_463795.1| Oryza sativa (japonica cultivar-group), mRNA 98 3e-17
17ref|XM_506674.1| PREDICTED Oryza sativa (japonica cultivar-group... 98 3e-17
18dbj|AK101537.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
19dbj|AK070603.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
20gb|BT018779.1| Zea mays clone EL01N0526C09.d mRNA sequence 88 3e-14
21gb|BT018139.1| Zea mays clone EL01N0554H01.c mRNA sequence 88 3e-14
22gb|AY104969.1| Zea mays PCO070942 mRNA sequence 88 3e-14
23gb|DQ226886.1| Boechera divaricarpa isolate SLW-C-H11 mRNA sequence 70 7e-09
24gb|L27473.1|CRECPN1C Chlamydomonas reinhardtii chaperonin beta-l... 68 3e-08
25dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
26dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
27gb|L27471.1|CRECPN1A Chlamydomonas reinhardtii chaperonin beta-l... 62 2e-06
28ref|NM_112193.1| Arabidopsis thaliana ATP binding / protein bind... 58 3e-05
29dbj|AK118623.2| Arabidopsis thaliana At3g13470 mRNA for putative... 58 3e-05
30gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, comp... 56 1e-04
31dbj|AB158542.1| Ipomoea nil cpn60 beta mRNA for 60 kDa chaperoni... 52 0.002
32gb|BT013332.1| Lycopersicon esculentum clone 135060F, mRNA sequence 48 0.026
33gb|U21139.1|PSU21139 Pisum sativum chaperonin precursor mRNA, ch... 48 0.026
34gb|AY811022.1| Schistosoma japonicum SJCHGC03737 protein mRNA, p... 44 0.40
35gb|AF233387.1| Rhodococcus equi GroEL (groEL) gene, complete cds... 44 0.40
36ref|XM_975351.1| PREDICTED: Mus musculus similar to odd Oz/ten-m... 44 0.40
37emb|Z69885.1|CET04C10 Caenorhabditis elegans Cosmid T04C10, comp... 44 0.40
38gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome... 44 0.40
39gb|AC121888.3| Mus musculus BAC clone RP24-142M5 from chromosome... 44 0.40
40ref|XM_546253.2| PREDICTED: Canis familiaris similar to odd Oz/t... 44 0.40
41emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on ch... 44 0.40
42emb|AL606512.8| Mouse DNA sequence from clone RP23-155D19 on chr... 44 0.40
43ref|NM_078055.2| Caenorhabditis elegans ATF (cAMP-dependent tran... 44 0.40
44gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome 44 0.40
45ref|NM_011856.2| Mus musculus odd Oz/ten-m homolog 2 (Drosophila... 44 0.40
46gb|U46136.1|STU46136 Solanum tuberosum chaperonin-60 beta subuni... 44 0.40
47emb|AL671998.10| Mouse DNA sequence from clone RP23-71G11 on chr... 44 0.40
48dbj|AB025411.1| Mus musculus mRNA for Ten-m2, complete cds 44 0.40
49ref|NM_128753.2| Arabidopsis thaliana unknown protein AT2G31945 ... 42 1.6
50ref|XM_614930.2| PREDICTED: Bos taurus similar to odd Oz/ten-m h... 42 1.6
51emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chr... 42 1.6
52emb|AL592423.8| Human DNA sequence from clone RP11-1A24 on chrom... 42 1.6
53gb|AY097404.1| Arabidopsis thaliana At2g31940/F20M17.2 mRNA, com... 42 1.6
54gb|AC006533.8| Arabidopsis thaliana chromosome 2 clone F20M17 ma... 42 1.6
55gb|AC099665.2| Homo sapiens chromosome 3 clone RP11-15B21, compl... 42 1.6
56gb|AY075662.1| Arabidopsis thaliana At2g31940/F20M17.2 mRNA, com... 42 1.6
57gb|AC009774.18|AC009774 Homo sapiens 12 BAC RP11-524K8 (Roswell ... 42 1.6
58gb|AY086578.1| Arabidopsis thaliana clone 258917 mRNA, complete ... 42 1.6
59dbj|AB019234.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.6
60emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chr... 42 1.6
61ref|NM_125033.3| Arabidopsis thaliana ATP binding / protein bind... 40 6.2
62ref|NM_001037006.1| Arabidopsis thaliana ATP binding / protein b... 40 6.2
63ref|NM_130072.2| Arabidopsis thaliana cyclin-dependent protein k... 40 6.2
64gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome... 40 6.2
65ref|XM_641134.1| Dictyostelium discoideum hypothetical protein (... 40 6.2
66gb|AC169504.1| Mus musculus BAC clone RP23-416K3 from chromosome... 40 6.2
67gb|AC119889.13| Mus musculus chromosome 1, clone RP24-220M12, co... 40 6.2
68gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.2
69gb|AC117780.5| Mus musculus chromosome 16, clone RP24-540H15, co... 40 6.2
70gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.2
71gb|AC129219.3| Mus musculus BAC clone RP24-474C15 from chromosom... 40 6.2
72gb|AC116470.12| Mus musculus chromosome 16, clone RP23-383N18, c... 40 6.2
73gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome... 40 6.2
74gb|AC129595.3| Mus musculus BAC clone RP23-257H19 from chromosom... 40 6.2
75gb|AC131104.3| Mus musculus BAC clone RP23-245G19 from chromosom... 40 6.2
76gb|AC122028.3| Mus musculus BAC clone RP24-394D4 from 2, complet... 40 6.2
77gb|AY232267.1| Dictyostelium discoideum putative protein Roco5 (... 40 6.2
78emb|BX908811.1| Neurospora crassa DNA linkage group VI Cosmid co... 40 6.2
79emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.2
80emb|AL451022.1|NC2E4 Neurospora crassa DNA linkage group V Cosmi... 40 6.2
81emb|AL808115.10| Mouse DNA sequence from clone RP23-224M8 on chr... 40 6.2
82gb|AC023644.6| Homo sapiens chromosome 8, clone RP11-257P3, comp... 40 6.2
83gb|AC163654.2| Mus musculus BAC clone RP23-259M14 from chromosom... 40 6.2
84gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.2
85gb|AC115621.3| Homo sapiens BAC clone RP11-315D13 from 4, comple... 40 6.2
86gb|AY074650.1| Arabidopsis thaliana At2g45080/T14P1.11 mRNA, com... 40 6.2
87dbj|AK220921.1| Arabidopsis thaliana mRNA for RuBisCO subunit bi... 40 6.2
88gb|AC018616.5|AC018616 Homo sapiens chromosome 8, clone RP11-157... 40 6.2
89emb|BX832336.1|CNS09ZVE Arabidopsis thaliana Full-length cDNA Co... 40 6.2
90emb|BX831822.1|CNS09YNB Arabidopsis thaliana Full-length cDNA Co... 40 6.2
91gb|AF079317.1| Sphingomonas aromaticivorans plasmid pNL1, comple... 40 6.2
92gb|AC154383.2| Mus musculus BAC clone RP23-38N16 from chromosome... 40 6.2
93gb|AF065610.1|AF065610 Toxoplasma gondii strain 76K heat shock p... 40 6.2
94gb|AF065609.1|AF065609 Toxoplasma gondii strain 76K heat shock p... 40 6.2
95gb|AC141643.4| Mus musculus BAC clone RP23-198F6 from chromosome... 40 6.2
96gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II sectio... 40 6.2
97emb|BX284649.14| Mouse DNA sequence from clone RP23-42M7 on chro... 40 6.2
98gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.2
99emb|BX000537.11| Mouse DNA sequence from clone RP24-392J24 on ch... 40 6.2
100emb|AL627302.20| Mouse DNA sequence from clone RP23-272D10 on ch... 40 6.2

>emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60
          Length = 1707

 Score =  509 bits (257), Expect = e-141
 Identities = 331/354 (93%), Gaps = 2/354 (0%)
 Strand = Plus / Minus

                                                                        
Query: 110  caccatcaatctctcaaaacttggttcatgctaccaaaaattaaaccacatcctctggag 169
            ||||||||||||||||||||||||| ||||||||||||| ||||||||| || || ||||
Sbjct: 1579 caccatcaatctctcaaaacttggtccatgctaccaaaa-ttaaaccacgtcatccggag 1521

                                                                        
Query: 170  agactccaccgtgtcgctcatcagtatccgaagccggagttgtccatggggttgacgagg 229
            | ||||  || |||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1520 aaactcggccatgtcactcatcagtatccgaagccggagttgtccatggggttggcgagg 1461

                                                                        
Query: 230  ggagcgggctcaggctccttgatctcgacgaccaccacgtccgacgtcaggaaggtcttg 289
            || |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1460 ggcgcggcctcaggctccttgatctcgacgaccaccacgtcggacgtcaggaaggtcttg 1401

                                                                        
Query: 290  gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 349
            |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1400 gccaccgatgcggcgtgctccaggcaacatctcaccaccttggtggggtcgatgatacca 1341

                                                                        
Query: 350  gcagccatcaagtcctcgtactgcccagtggcagcgttgtagccgaacttgaagttgtcg 409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 gcagccatcaagtcctcgtactgcccagtggcagcgttgtagccgaacttgaagttgtcg 1281

                                                                  
Query: 410  ttagaaagaaccttntntggtaacaacactaccattgacaccancattcttggc 463
            |||||||||||||| |  |||||||||||| |||||||||||  ||||||||||
Sbjct: 1280 ttagaaagaaccttctc-ggtaacaacactgccattgacaccggcattcttggc 1228



 Score =  119 bits (60), Expect = 8e-24
 Identities = 80/84 (95%), Gaps = 2/84 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctgttccaattacatcaagnaaatttccgctaaatgtttctctgcttatttcgccattct 60
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1688 ctgttccaattacatcaag-aaatttccgctaaatgtttctctgcttatttcgccgttct 1630

                                    
Query: 61   ggcaggcacatcatattgcatttt 84
            ||| ||||||||| ||||||||||
Sbjct: 1629 ggc-ggcacatcacattgcatttt 1607



to top

>ref|NM_185419.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2131

 Score =  280 bits (141), Expect = 4e-72
 Identities = 241/274 (87%), Gaps = 1/274 (0%)
 Strand = Plus / Minus

                                                                        
Query: 187  tcatcagtatccgaagccggagttgtccatggggttgacgaggggagcgggctcaggctc 246
            ||||||||| ||| |||||||||||||||| ||||||  || ||| || |||||||||||
Sbjct: 1898 tcatcagtacccgtagccggagttgtccatcgggttggtgacgggcgcaggctcaggctc 1839

                                                                        
Query: 247  cttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatg 306
            ||||||||||||||| || || ||||| || ||||| ||||||||||||||||| |||||
Sbjct: 1838 cttgatctcgacgacgacgacatccgatgtgaggaatgtcttggccaccgacgcagcatg 1779

                                                                        
Query: 307  ctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctc 366
            ||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 1778 ctcaagacaacatctcaccaccttagtggggtcaatgataccagcagccatcaaatcctc 1719

                                                                        
Query: 367  gtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaagaaccttntn 426
            |||||| ||||| ||||| ||||| || ||||||||||| |||||||| |||||||| | 
Sbjct: 1718 gtactgtccagttgcagcattgtaaccaaacttgaagttatcgttagagagaaccttctc 1659

                                              
Query: 427  tggtaacaacactaccattgacaccancattctt 460
             ||||||||| || ||||| |||||| |||||||
Sbjct: 1658 -ggtaacaacgcttccattaacaccagcattctt 1626



to top

>dbj|AK101334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034I03, full
            insert sequence
          Length = 2131

 Score =  280 bits (141), Expect = 4e-72
 Identities = 241/274 (87%), Gaps = 1/274 (0%)
 Strand = Plus / Minus

                                                                        
Query: 187  tcatcagtatccgaagccggagttgtccatggggttgacgaggggagcgggctcaggctc 246
            ||||||||| ||| |||||||||||||||| ||||||  || ||| || |||||||||||
Sbjct: 1898 tcatcagtacccgtagccggagttgtccatcgggttggtgacgggcgcaggctcaggctc 1839

                                                                        
Query: 247  cttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatg 306
            ||||||||||||||| || || ||||| || ||||| ||||||||||||||||| |||||
Sbjct: 1838 cttgatctcgacgacgacgacatccgatgtgaggaatgtcttggccaccgacgcagcatg 1779

                                                                        
Query: 307  ctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctc 366
            ||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 1778 ctcaagacaacatctcaccaccttagtggggtcaatgataccagcagccatcaaatcctc 1719

                                                                        
Query: 367  gtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaagaaccttntn 426
            |||||| ||||| ||||| ||||| || ||||||||||| |||||||| |||||||| | 
Sbjct: 1718 gtactgtccagttgcagcattgtaaccaaacttgaagttatcgttagagagaaccttctc 1659

                                              
Query: 427  tggtaacaacactaccattgacaccancattctt 460
             ||||||||| || ||||| |||||| |||||||
Sbjct: 1658 -ggtaacaacgcttccattaacaccagcattctt 1626



to top

>dbj|AK062098.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A02, full
            insert sequence
          Length = 1781

 Score =  280 bits (141), Expect = 4e-72
 Identities = 241/274 (87%), Gaps = 1/274 (0%)
 Strand = Plus / Minus

                                                                        
Query: 187  tcatcagtatccgaagccggagttgtccatggggttgacgaggggagcgggctcaggctc 246
            ||||||||| ||| |||||||||||||||| ||||||  || ||| || |||||||||||
Sbjct: 1566 tcatcagtacccgtagccggagttgtccatcgggttggtgacgggcgcaggctcaggctc 1507

                                                                        
Query: 247  cttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatg 306
            ||||||||||||||| || || ||||| || ||||| ||||||||||||||||| |||||
Sbjct: 1506 cttgatctcgacgacgacgacatccgatgtgaggaatgtcttggccaccgacgcagcatg 1447

                                                                        
Query: 307  ctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctc 366
            ||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 1446 ctcaagacaacatctcaccaccttagtggggtcaatgataccagcagccatcaaatcctc 1387

                                                                        
Query: 367  gtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaagaaccttntn 426
            |||||| ||||| ||||| ||||| || ||||||||||| |||||||| |||||||| | 
Sbjct: 1386 gtactgtccagttgcagcattgtaaccaaacttgaagttatcgttagagagaaccttctc 1327

                                              
Query: 427  tggtaacaacactaccattgacaccancattctt 460
             ||||||||| || ||||| |||||| |||||||
Sbjct: 1326 -ggtaacaacgcttccattaacaccagcattctt 1294



to top

>dbj|AK060117.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E09, full
           insert sequence
          Length = 1097

 Score =  280 bits (141), Expect = 4e-72
 Identities = 241/274 (87%), Gaps = 1/274 (0%)
 Strand = Plus / Minus

                                                                       
Query: 187 tcatcagtatccgaagccggagttgtccatggggttgacgaggggagcgggctcaggctc 246
           ||||||||| ||| |||||||||||||||| ||||||  || ||| || |||||||||||
Sbjct: 892 tcatcagtacccgtagccggagttgtccatcgggttggtgacgggcgcaggctcaggctc 833

                                                                       
Query: 247 cttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatg 306
           ||||||||||||||| || || ||||| || ||||| ||||||||||||||||| |||||
Sbjct: 832 cttgatctcgacgacgacgacatccgatgtgaggaatgtcttggccaccgacgcagcatg 773

                                                                       
Query: 307 ctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctc 366
           ||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 772 ctcaagacaacatctcaccaccttagtggggtcaatgataccagcagccatcaaatcctc 713

                                                                       
Query: 367 gtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaagaaccttntn 426
           |||||| ||||| ||||| ||||| || ||||||||||| |||||||| |||||||| | 
Sbjct: 712 gtactgtccagttgcagcattgtaaccaaacttgaagttatcgttagagagaaccttctc 653

                                             
Query: 427 tggtaacaacactaccattgacaccancattctt 460
            ||||||||| || ||||| |||||| |||||||
Sbjct: 652 -ggtaacaacgcttccattaacaccagcattctt 620



to top

>gb|AY675582.1| Zea mays RuBisCo subunit binding-protein beta subunit mRNA, partial
            cds
          Length = 1471

 Score =  214 bits (108), Expect = 2e-52
 Identities = 227/266 (85%), Gaps = 1/266 (0%)
 Strand = Plus / Minus

                                                                        
Query: 186  ctcatcagtatccgaagccggagttgtccatggggttgacgaggggagcgggctcaggct 245
            |||||||||||||  |||| ||||||||||| |||||  |||  || |  | ||| ||||
Sbjct: 1235 ctcatcagtatccatagccagagttgtccatcgggtttgcgacaggtgtagcctccggct 1176

                                                                        
Query: 246  ccttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcat 305
            ||||||| ||||||||||| || || || ||||||||||||||||||||||||||||| |
Sbjct: 1175 ccttgatatcgacgaccacaacatctgatgtcaggaaggtcttggccaccgacgcggcgt 1116

                                                                        
Query: 306  gctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcct 365
            |||||| ||| |||||||||||||| |||||||| ||||||||||||||||||| |||||
Sbjct: 1115 gctccaagcagcatctcaccaccttggtggggtcaatgataccagcagccatcaggtcct 1056

                                                                        
Query: 366  cgtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaagaaccttnt 425
            ||||||| ||||| ||||| ||||| ||  |||||||||| || |||||||| ||||| |
Sbjct: 1055 cgtactgtccagtagcagcattgtaaccatacttgaagttatcattagaaaggaccttct 996

                                      
Query: 426  ntggtaacaacactaccattgacacc 451
               || |||||||| |||||||||||
Sbjct: 995  c-agtgacaacactgccattgacacc 971



to top

>gb|AY103778.1| Zea mays PCO063180 mRNA sequence
          Length = 2338

 Score =  214 bits (108), Expect = 2e-52
 Identities = 201/232 (86%)
 Strand = Plus / Minus

                                                                        
Query: 192  agtatccgaagccggagttgtccatggggttgacgaggggagcgggctcaggctccttga 251
            |||||||  |||| ||||||||||| |||||  | ||||| || | ||| |||||||| |
Sbjct: 2034 agtatccatagccagagttgtccatcgggttagcaaggggcgcagactctggctccttaa 1975

                                                                        
Query: 252  tctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctcca 311
            | ||||||||||| || || || |||||||||||||||||||||||||||||||||||||
Sbjct: 1974 tatcgacgaccacaacatcagatgtcaggaaggtcttggccaccgacgcggcatgctcca 1915

                                                                        
Query: 312  ggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctcgtact 371
              || ||||||||||||||||| || || |||||||||||||||||||||||||||||||
Sbjct: 1914 aacagcatctcaccaccttagtaggatcaatgataccagcagccatcaagtcctcgtact 1855

                                                                
Query: 372  gcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaagaacctt 423
            | ||||| ||||| ||||| ||  |||||||||| ||||||||||| |||||
Sbjct: 1854 gtccagtagcagcattgtaaccatacttgaagttatcgttagaaaggacctt 1803



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  133 bits (67), Expect = 6e-28
 Identities = 112/127 (88%)
 Strand = Plus / Plus

                                                                          
Query: 203    ccggagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgacc 262
              |||||||||||||| ||||||  || ||| || |||||||||||||||||||||||||| 
Sbjct: 810397 ccggagttgtccatcgggttggtgacgggcgcaggctcaggctccttgatctcgacgacg 810456

                                                                          
Query: 263    accacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctc 322
              || || ||||| || ||||| ||||||||||||||||| |||||||| || |||||||||
Sbjct: 810457 acgacatccgatgtgaggaatgtcttggccaccgacgcagcatgctcaagacaacatctc 810516

                     
Query: 323    accacct 329
              |||||||
Sbjct: 810517 accacct 810523



 Score =  121 bits (61), Expect = 2e-24
 Identities = 88/97 (90%)
 Strand = Plus / Plus

                                                                          
Query: 326    accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 385
              |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| 
Sbjct: 810972 accttagtggggtcaatgataccagcagccatcaaatcctcgtactgtccagttgcagca 811031

                                                   
Query: 386    ttgtagccgaacttgaagttgtcgttagaaagaacct 422
              ||||| || ||||||||||| |||||||| |||||||
Sbjct: 811032 ttgtaaccaaacttgaagttatcgttagagagaacct 811068



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                       
Query: 328    cttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagc 384
              |||||||||||| ||  | |||||| |||| |||||||||||||  ||||| |||||
Sbjct: 806511 cttagtggggtcaatagtcccagcaaccattaagtcctcgtacttgccagtagcagc 806567



to top

>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0541H01
          Length = 157519

 Score =  133 bits (67), Expect = 6e-28
 Identities = 112/127 (88%)
 Strand = Plus / Plus

                                                                         
Query: 203   ccggagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgacc 262
             |||||||||||||| ||||||  || ||| || |||||||||||||||||||||||||| 
Sbjct: 93531 ccggagttgtccatcgggttggtgacgggcgcaggctcaggctccttgatctcgacgacg 93590

                                                                         
Query: 263   accacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctc 322
             || || ||||| || ||||| ||||||||||||||||| |||||||| || |||||||||
Sbjct: 93591 acgacatccgatgtgaggaatgtcttggccaccgacgcagcatgctcaagacaacatctc 93650

                    
Query: 323   accacct 329
             |||||||
Sbjct: 93651 accacct 93657



 Score =  121 bits (61), Expect = 2e-24
 Identities = 88/97 (90%)
 Strand = Plus / Plus

                                                                         
Query: 326   accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 385
             |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| 
Sbjct: 94106 accttagtggggtcaatgataccagcagccatcaaatcctcgtactgtccagttgcagca 94165

                                                  
Query: 386   ttgtagccgaacttgaagttgtcgttagaaagaacct 422
             ||||| || ||||||||||| |||||||| |||||||
Sbjct: 94166 ttgtaaccaaacttgaagttatcgttagagagaacct 94202



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                      
Query: 328   cttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagc 384
             |||||||||||| ||  | |||||| |||| |||||||||||||  ||||| |||||
Sbjct: 89645 cttagtggggtcaatagtcccagcaaccattaagtcctcgtacttgccagtagcagc 89701



to top

>ref|NM_179480.1| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding /
            protein binding AT1G55490 (CPN60B) transcript variant
            AT1G55490.2 mRNA, complete cds
          Length = 2060

 Score =  113 bits (57), Expect = 5e-22
 Identities = 208/258 (80%), Gaps = 1/258 (0%)
 Strand = Plus / Minus

                                                                        
Query: 206  gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 265
            ||||||||||| |||||| ||| |||| | || ||||| ||||||||||| || || || 
Sbjct: 1890 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1831

                                                                        
Query: 266  acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 325
              ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| 
Sbjct: 1830 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1771

                                                                        
Query: 326  accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 385
            ||||| || || |||||||| || ||||||||||| ||||||||||  || || ||||| 
Sbjct: 1770 acctttgttggatcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagca 1711

                                                                        
Query: 386  ttgtagccgaacttgaagttgtcgttagaaagaaccttntntggtaacaacactaccatt 445
            ||||| ||||| || | ||| ||||| ||||| ||||| |  | |||| ||||| |||||
Sbjct: 1710 ttgtaaccgaatttcacgttatcgttggaaagcaccttctc-gctaactacacttccatt 1652

                              
Query: 446  gacaccancattcttggc 463
             |||||| ||||||||||
Sbjct: 1651 aacaccagcattcttggc 1634



to top

>ref|NM_104424.2| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding /
            protein binding AT1G55490 (CPN60B) transcript variant
            AT1G55490.1 mRNA, complete cds
          Length = 2087

 Score =  113 bits (57), Expect = 5e-22
 Identities = 208/258 (80%), Gaps = 1/258 (0%)
 Strand = Plus / Minus

                                                                        
Query: 206  gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 265
            ||||||||||| |||||| ||| |||| | || ||||| ||||||||||| || || || 
Sbjct: 1917 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1858

                                                                        
Query: 266  acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 325
              ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| 
Sbjct: 1857 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1798

                                                                        
Query: 326  accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 385
            ||||| || || |||||||| || ||||||||||| ||||||||||  || || ||||| 
Sbjct: 1797 acctttgttggatcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagca 1738

                                                                        
Query: 386  ttgtagccgaacttgaagttgtcgttagaaagaaccttntntggtaacaacactaccatt 445
            ||||| ||||| || | ||| ||||| ||||| ||||| |  | |||| ||||| |||||
Sbjct: 1737 ttgtaaccgaatttcacgttatcgttggaaagcaccttctc-gctaactacacttccatt 1679

                              
Query: 446  gacaccancattcttggc 463
             |||||| ||||||||||
Sbjct: 1678 aacaccagcattcttggc 1661



to top

>gb|AY081501.1| Arabidopsis thaliana Rubisco subunit binding-protein beta subunit
            (At1g55490) mRNA, complete cds
          Length = 1844

 Score =  113 bits (57), Expect = 5e-22
 Identities = 208/258 (80%), Gaps = 1/258 (0%)
 Strand = Plus / Minus

                                                                        
Query: 206  gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 265
            ||||||||||| |||||| ||| |||| | || ||||| ||||||||||| || || || 
Sbjct: 1787 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1728

                                                                        
Query: 266  acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 325
              ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| 
Sbjct: 1727 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1668

                                                                        
Query: 326  accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 385
            ||||| || || |||||||| || ||||||||||| ||||||||||  || || ||||| 
Sbjct: 1667 acctttgttggatcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagca 1608

                                                                        
Query: 386  ttgtagccgaacttgaagttgtcgttagaaagaaccttntntggtaacaacactaccatt 445
            ||||| ||||| || | ||| ||||| ||||| ||||| |  | |||| ||||| |||||
Sbjct: 1607 ttgtaaccgaatttcacgttatcgttggaaagcaccttctc-gctaactacacttccatt 1549

                              
Query: 446  gacaccancattcttggc 463
             |||||| ||||||||||
Sbjct: 1548 aacaccagcattcttggc 1531



to top

>gb|AF386945.1|AF386945 Arabidopsis thaliana Rubisco subunit binding-protein beta subunit
            (T5A14.11) mRNA, complete cds
          Length = 2060

 Score =  113 bits (57), Expect = 5e-22
 Identities = 208/258 (80%), Gaps = 1/258 (0%)
 Strand = Plus / Minus

                                                                        
Query: 206  gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 265
            ||||||||||| |||||| ||| |||| | || ||||| ||||||||||| || || || 
Sbjct: 1909 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1850

                                                                        
Query: 266  acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 325
              ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| 
Sbjct: 1849 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1790

                                                                        
Query: 326  accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 385
            ||||| || || |||||||| || ||||||||||| ||||||||||  || || ||||| 
Sbjct: 1789 acctttgttggatcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagca 1730

                                                                        
Query: 386  ttgtagccgaacttgaagttgtcgttagaaagaaccttntntggtaacaacactaccatt 445
            ||||| ||||| || | ||| ||||| ||||| ||||| |  | |||| ||||| |||||
Sbjct: 1729 ttgtaaccgaatttcacgttatcgttggaaagcaccttctc-gctaactacacttccatt 1671

                              
Query: 446  gacaccancattcttggc 463
             |||||| ||||||||||
Sbjct: 1670 aacaccagcattcttggc 1653



to top

>emb|BX814891.1|CNS0ADZ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS16ZG05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2000

 Score =  105 bits (53), Expect = 1e-19
 Identities = 208/258 (80%), Gaps = 2/258 (0%)
 Strand = Plus / Minus

                                                                        
Query: 206  gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 265
            ||||||||||| |||||| ||| |||| | || ||||| ||||||||||| || || || 
Sbjct: 1871 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1812

                                                                        
Query: 266  acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 325
              ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| 
Sbjct: 1811 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1752

                                                                        
Query: 326  accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 385
            ||||| || || |||||||| || ||||||||||| ||||||||||  || || ||||| 
Sbjct: 1751 acctttgttggatcgatgattcctgcagccatcaa-tcctcgtacttgccggttgcagca 1693

                                                                        
Query: 386  ttgtagccgaacttgaagttgtcgttagaaagaaccttntntggtaacaacactaccatt 445
            ||||| ||||| || | ||| ||||| ||||| ||||| |  | |||| ||||| |||||
Sbjct: 1692 ttgtaaccgaatttcacgttatcgttggaaagcaccttctc-gctaactacacttccatt 1634

                              
Query: 446  gacaccancattcttggc 463
             |||||| ||||||||||
Sbjct: 1633 aacaccagcattcttggc 1616



to top

>gb|M35600.1|BNA60CPNB B.napus plastid 60-kDa chaperonin-60 beta-polypeptide (cpn-60 beta)
            mRNA, partial cds
          Length = 1982

 Score =  103 bits (52), Expect = 5e-19
 Identities = 154/188 (81%)
 Strand = Plus / Minus

                                                                        
Query: 236  ggctcaggctccttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccacc 295
            |||||||||||||||||||| || |||||   ||| ||| ||| ||| ||||| || |||
Sbjct: 1820 ggctcaggctccttgatctcaacaaccacacagtcagacatcaagaatgtctttgcaacc 1761

                                                                        
Query: 296  gacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagcc 355
            || || ||||| |||| |||||||||||| |||||||| || |||||||| || ||||||
Sbjct: 1760 gaagctgcatgttccaagcaacatctcacaaccttagttggatcgatgattcctgcagcc 1701

                                                                        
Query: 356  atcaagtcctcgtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaa 415
            || |  ||||||||||  || || ||||| ||||| |||||||| |  || |||||||||
Sbjct: 1700 attagatcctcgtacttgccggttgcagcattgtaaccgaacttcacattatcgttagaa 1641

                    
Query: 416  agaacctt 423
            || |||||
Sbjct: 1640 agcacctt 1633



to top

>ref|XM_463795.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2155

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                        
Query: 290  gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 349
            ||||||||||| |||||||||| |||||||||||||||||| ||||| || || ||||||
Sbjct: 1789 gccaccgacgcagcatgctccaagcaacatctcaccaccttggtgggatcaataatacca 1730

                             
Query: 350  gcagccatcaagtcctc 366
            ||||||||||| |||||
Sbjct: 1729 gcagccatcaaatcctc 1713



to top

>ref|XM_506674.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1435_F07.26 mRNA
          Length = 2310

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                        
Query: 290  gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 349
            ||||||||||| |||||||||| |||||||||||||||||| ||||| || || ||||||
Sbjct: 1809 gccaccgacgcagcatgctccaagcaacatctcaccaccttggtgggatcaataatacca 1750

                             
Query: 350  gcagccatcaagtcctc 366
            ||||||||||| |||||
Sbjct: 1749 gcagccatcaaatcctc 1733



to top

>dbj|AK101537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E22, full
            insert sequence
          Length = 2154

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                        
Query: 290  gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 349
            ||||||||||| |||||||||| |||||||||||||||||| ||||| || || ||||||
Sbjct: 1788 gccaccgacgcagcatgctccaagcaacatctcaccaccttggtgggatcaataatacca 1729

                             
Query: 350  gcagccatcaagtcctc 366
            ||||||||||| |||||
Sbjct: 1728 gcagccatcaaatcctc 1712



to top

>dbj|AK070603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059D06, full
            insert sequence
          Length = 2310

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                        
Query: 290  gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 349
            ||||||||||| |||||||||| |||||||||||||||||| ||||| || || ||||||
Sbjct: 1809 gccaccgacgcagcatgctccaagcaacatctcaccaccttggtgggatcaataatacca 1750

                             
Query: 350  gcagccatcaagtcctc 366
            ||||||||||| |||||
Sbjct: 1749 gcagccatcaaatcctc 1733



to top

>gb|BT018779.1| Zea mays clone EL01N0526C09.d mRNA sequence
          Length = 2155

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                        
Query: 280  gaaggtcttggccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtc 339
            |||||| || |||||||| || |||||||||| ||| || ||||| ||||| ||||| ||
Sbjct: 1792 gaaggttttcgccaccgatgcagcatgctccaagcagcacctcacaaccttggtgggatc 1733

                                            
Query: 340  gatgataccagcagccatcaagtcctcgtact 371
             |||||||||||||||||||||||||| ||||
Sbjct: 1732 aatgataccagcagccatcaagtcctcatact 1701



to top

>gb|BT018139.1| Zea mays clone EL01N0554H01.c mRNA sequence
          Length = 975

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                       
Query: 280 gaaggtcttggccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtc 339
           |||||| || |||||||| || |||||||||| ||| || ||||| ||||| ||||| ||
Sbjct: 587 gaaggttttcgccaccgatgcagcatgctccaagcagcacctcacaaccttggtgggatc 528

                                           
Query: 340 gatgataccagcagccatcaagtcctcgtact 371
            |||||||||||||||||||||||||| ||||
Sbjct: 527 aatgataccagcagccatcaagtcctcatact 496



to top

>gb|AY104969.1| Zea mays PCO070942 mRNA sequence
          Length = 2290

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                        
Query: 280  gaaggtcttggccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtc 339
            |||||| || |||||||| || |||||||||| ||| || ||||| ||||| ||||| ||
Sbjct: 1920 gaaggttttcgccaccgatgcagcatgctccaagcagcacctcacaaccttggtgggatc 1861

                                            
Query: 340  gatgataccagcagccatcaagtcctcgtact 371
             |||||||||||||||||||||||||| ||||
Sbjct: 1860 aatgataccagcagccatcaagtcctcatact 1829



to top

>gb|DQ226886.1| Boechera divaricarpa isolate SLW-C-H11 mRNA sequence
          Length = 331

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 131/163 (80%)
 Strand = Plus / Minus

                                                                       
Query: 206 gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 265
           ||||||||||| |||||| ||| ||| || || ||||| ||||||||||| || || || 
Sbjct: 163 gagttgtccattgggttgccgacgggggctggttcaggttccttgatctcaacaacaaca 104

                                                                       
Query: 266 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 325
             ||||||| ||| ||| ||||| || || || || || || |||| |||||||||||| 
Sbjct: 103 cagtccgacatcaagaacgtctttgcaactgaagctgcgtgttccaagcaacatctcaca 44

                                                      
Query: 326 accttagtggggtcgatgataccagcagccatcaagtcctcgt 368
           ||||| || || |||||||| || |||||||| || |||||||
Sbjct: 43  acctttgttggatcgatgattcctgcagccattaaatcctcgt 1



to top

>gb|L27473.1|CRECPN1C Chlamydomonas reinhardtii chaperonin beta-like subunit, partial cds
          Length = 1618

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                       
Query: 250 gatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctc 309
           |||||||  |||||||||||| | |  |||||||||||||||||||||| |||| | |||
Sbjct: 729 gatctcggtgaccaccacgtcagccagcaggaaggtcttggccaccgacacggcgttctc 670

                                                                     
Query: 310 caggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctcg 367
           |||  | || |  |||||||| |||||||||||||| || ||  |||||| |||||||
Sbjct: 669 cagcgagcagcggaccaccttggtggggtcgatgatgccggcctccatcaggtcctcg 612



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                      
Query: 290    gccaccgacgcggcatgctccaggcaacatctcaccacct 329
              ||||||||||| |||||||||| |||||||||||||||||
Sbjct: 163146 gccaccgacgcagcatgctccaagcaacatctcaccacct 163107



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 326    accttagtggggtcgatgataccagcagccatcaagtcctc 366
              ||||| ||||| || || ||||||||||||||||| |||||
Sbjct: 162831 accttggtgggatcaataataccagcagccatcaaatcctc 162791



to top

>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1435_F07
          Length = 139041

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                      
Query: 290    gccaccgacgcggcatgctccaggcaacatctcaccacct 329
              ||||||||||| |||||||||| |||||||||||||||||
Sbjct: 112173 gccaccgacgcagcatgctccaagcaacatctcaccacct 112134



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 326    accttagtggggtcgatgataccagcagccatcaagtcctc 366
              ||||| ||||| || || ||||||||||||||||| |||||
Sbjct: 111858 accttggtgggatcaataataccagcagccatcaaatcctc 111818



to top

>gb|L27471.1|CRECPN1A Chlamydomonas reinhardtii chaperonin beta-like subunit, complete cds
          Length = 1970

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                        
Query: 259  gaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaaca 318
            |||||||||||||| |  |||||||||||||||||||||| |||| | ||||| | | ||
Sbjct: 1227 gaccaccacgtccgccagcaggaaggtcttggccaccgacacggcgttctccatggagca 1168

                                       
Query: 319  tctcaccaccttagtggggtcgatgat 345
             |  |||||||| | ||||||||||||
Sbjct: 1167 gcggaccaccttggaggggtcgatgat 1141



to top

>ref|NM_112193.1| Arabidopsis thaliana ATP binding / protein binding AT3G13470 mRNA,
            complete cds
          Length = 1922

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 299  gcggcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatc 358
            |||||||| || | |||||||||||| ||||| || ||||||||||| || |||||||||
Sbjct: 1682 gcggcatgttctaagcaacatctcacaacctttgtcgggtcgatgatgcctgcagccatc 1623

             
Query: 359  a 359
            |
Sbjct: 1622 a 1622



to top

>dbj|AK118623.2| Arabidopsis thaliana At3g13470 mRNA for putative chaperonin 60
           beta, complete cds, clone: RAFL19-88-M03
          Length = 471

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                       
Query: 299 gcggcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatc 358
           |||||||| || | |||||||||||| ||||| || ||||||||||| || |||||||||
Sbjct: 185 gcggcatgttctaagcaacatctcacaacctttgtcgggtcgatgatgcctgcagccatc 126

            
Query: 359 a 359
           |
Sbjct: 125 a 125



to top

>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence
          Length = 87967

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 100/124 (80%)
 Strand = Plus / Minus

                                                                         
Query: 206   gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 265
             ||||||||||| |||||| ||| |||| | || ||||| ||||||||||| || || || 
Sbjct: 55104 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 55045

                                                                         
Query: 266   acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 325
               ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| 
Sbjct: 55044 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 54985

                 
Query: 326   acct 329
             ||||
Sbjct: 54984 acct 54981



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                         
Query: 338   tcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcgttgtagccgaac 397
             |||||||| || ||||||||||| ||||||||||  || || ||||| ||||| ||||| 
Sbjct: 54880 tcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagcattgtaaccgaat 54821

                                      
Query: 398   ttgaagttgtcgttagaaagaacct 422
             || | ||| ||||| ||||| ||||
Sbjct: 54820 ttcacgttatcgttggaaagcacct 54796



to top

>dbj|AB158542.1| Ipomoea nil cpn60 beta mRNA for 60 kDa chaperonin beta subunit-like
           protein, partial cds
          Length = 437

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 314 caacatctcaccaccttagtggggtcgatgataccagcagccatcaagtc 363
           ||||||||||||||||| || || || || || |||||||||||||||||
Sbjct: 50  caacatctcaccaccttggttggatcaataattccagcagccatcaagtc 1



to top

>gb|BT013332.1| Lycopersicon esculentum clone 135060F, mRNA sequence
          Length = 2189

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 302  gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 357
            |||||||||| ||||||||| ||||| || || || || || ||||||||||||||
Sbjct: 1754 gcatgctccaagcaacatcttaccacttttgtaggatcaattataccagcagccat 1699



to top

>gb|U21139.1|PSU21139 Pisum sativum chaperonin precursor mRNA, chloroplast gene encoding
            chloroplast protein, complete cds
          Length = 2162

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 302  gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 357
            ||||| |||||||||||||| |||||||| || || || ||||| || ||||||||
Sbjct: 1794 gcatgttccaggcaacatctgaccacctttgttggatcaatgatccctgcagccat 1739



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 432  acaacactaccattgacaccancattctt 460
            |||||||||||||| |||||| |||||||
Sbjct: 1665 acaacactaccattaacaccagcattctt 1637



to top

>gb|AY811022.1| Schistosoma japonicum SJCHGC03737 protein mRNA, partial cds
          Length = 568

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  aactacatcatcatcaccatca 117
           ||||||||||||||||||||||
Sbjct: 282 aactacatcatcatcaccatca 303



to top

>gb|AF233387.1| Rhodococcus equi GroEL (groEL) gene, complete cds; and unknown genes
          Length = 4713

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 335  gggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcgttg 388
            |||||| |||| |||||||||| || |||||||||||  || ||||| ||||||
Sbjct: 4311 gggtcgttgatgccagcagccagcaggtcctcgtactcaccggtggcggcgttg 4258



to top

>ref|XM_975351.1| PREDICTED: Mus musculus similar to odd Oz/ten-m homolog 2
            (LOC669490), mRNA
          Length = 7697

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 205  ggagttgtccatggggttgacg 226
            ||||||||||||||||||||||
Sbjct: 2277 ggagttgtccatggggttgacg 2256



to top

>emb|Z69885.1|CET04C10 Caenorhabditis elegans Cosmid T04C10, complete sequence
          Length = 20958

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 101  catcatcatcaccatcaatctc 122
            ||||||||||||||||||||||
Sbjct: 1554 catcatcatcaccatcaatctc 1533



to top

>gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome 1, complete
            sequence
          Length = 163778

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 97   actacatcatcatcaccatcaa 118
            ||||||||||||||||||||||
Sbjct: 8500 actacatcatcatcaccatcaa 8521



to top

>gb|AC121888.3| Mus musculus BAC clone RP24-142M5 from chromosome 1, complete sequence
          Length = 158354

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 97     actacatcatcatcaccatcaa 118
              ||||||||||||||||||||||
Sbjct: 102961 actacatcatcatcaccatcaa 102982



to top

>ref|XM_546253.2| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 2
            (LOC489135), mRNA
          Length = 8210

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 205  ggagttgtccatggggttgacg 226
            ||||||||||||||||||||||
Sbjct: 3873 ggagttgtccatggggttgacg 3852



to top

>emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on chromosome 11 Contains the
              5' end of the gene for a novel protein similar to human
              KIBRA, a pseudogene similar to part of actin, the Odz2 gene
              for odd Oz/ten-m homolog 2 (Drosophila) and two CpG
              islands, complete sequence
          Length = 186736

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 205    ggagttgtccatggggttgacg 226
              ||||||||||||||||||||||
Sbjct: 113689 ggagttgtccatggggttgacg 113710



to top

>emb|AL606512.8| Mouse DNA sequence from clone RP23-155D19 on chromosome 11, complete
              sequence
          Length = 157494

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 31     taaatgtttctctgcttatttc 52
              ||||||||||||||||||||||
Sbjct: 138017 taaatgtttctctgcttatttc 138038



to top

>ref|NM_078055.2| Caenorhabditis elegans ATF (cAMP-dependent transciption factor)
           family member (atf-5) (atf-5) mRNA, complete cds
          Length = 1044

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 101 catcatcatcaccatcaatctc 122
           ||||||||||||||||||||||
Sbjct: 320 catcatcatcaccatcaatctc 341



to top

>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome
          Length = 1993564

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 326    accttagtggggtcgatgataccagc 351
              |||||||| |||||||||||||||||
Sbjct: 381194 accttagttgggtcgatgataccagc 381169



to top

>ref|NM_011856.2| Mus musculus odd Oz/ten-m homolog 2 (Drosophila) (Odz2), mRNA
          Length = 8797

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 205  ggagttgtccatggggttgacg 226
            ||||||||||||||||||||||
Sbjct: 4366 ggagttgtccatggggttgacg 4345



to top

>gb|U46136.1|STU46136 Solanum tuberosum chaperonin-60 beta subunit mRNA, nuclear gene
            encoding chloroplast protein, complete cds
          Length = 2078

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 97/122 (79%)
 Strand = Plus / Minus

                                                                        
Query: 242  ggctccttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcg 301
            |||||||||||||| || |||||    || ||| ||| ||| ||||| ||||| || || 
Sbjct: 1785 ggctccttgatctcaaccaccacgcaatctgacatcaagaatgtcttagccacagatgca 1726

                                                                        
Query: 302  gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaag 361
            || || || || ||||| ||||||||||| || || || ||||| ||||||||||| |||
Sbjct: 1725 gcgtgttctagacaacacctcaccacctttgttggatcaatgatgccagcagccattaag 1666

              
Query: 362  tc 363
            ||
Sbjct: 1665 tc 1664



to top

>emb|AL671998.10| Mouse DNA sequence from clone RP23-71G11 on chromosome X, complete
              sequence
          Length = 220669

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 94     aaaactacatcatcatcaccatcaat 119
              |||| |||||||||||||||||||||
Sbjct: 165706 aaaaatacatcatcatcaccatcaat 165731



to top

>dbj|AB025411.1| Mus musculus mRNA for Ten-m2, complete cds
          Length = 8797

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 205  ggagttgtccatggggttgacg 226
            ||||||||||||||||||||||
Sbjct: 4366 ggagttgtccatggggttgacg 4345



to top

>ref|NM_128753.2| Arabidopsis thaliana unknown protein AT2G31945 mRNA, complete cds
          Length = 546

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  aactacatcatcatcaccatc 116
           |||||||||||||||||||||
Sbjct: 374 aactacatcatcatcaccatc 394



to top

>ref|XM_614930.2| PREDICTED: Bos taurus similar to odd Oz/ten-m homolog 2 (LOC541183),
            mRNA
          Length = 4770

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 205  ggagttgtccatggggttgac 225
            |||||||||||||||||||||
Sbjct: 1563 ggagttgtccatggggttgac 1543



to top

>emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chromosome 1, complete
             sequence
          Length = 129844

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    actacatcatcatcaccatca 117
             |||||||||||||||||||||
Sbjct: 33931 actacatcatcatcaccatca 33911



to top

>emb|AL592423.8| Human DNA sequence from clone RP11-1A24 on chromosome 6 Contains part
            of the GRM1 gene for metabotropic glutamate receptor 1
            and a novel pseudogene, complete sequence
          Length = 53728

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 77   tgcatttttcttatctcaaaa 97
            |||||||||||||||||||||
Sbjct: 4551 tgcatttttcttatctcaaaa 4531



to top

>gb|AY097404.1| Arabidopsis thaliana At2g31940/F20M17.2 mRNA, complete cds
          Length = 288

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  aactacatcatcatcaccatc 116
           |||||||||||||||||||||
Sbjct: 264 aactacatcatcatcaccatc 284



to top

>gb|AC006533.8| Arabidopsis thaliana chromosome 2 clone F20M17 map nga361, complete
            sequence
          Length = 100665

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   aactacatcatcatcaccatc 116
            |||||||||||||||||||||
Sbjct: 4484 aactacatcatcatcaccatc 4464



to top

>gb|AC099665.2| Homo sapiens chromosome 3 clone RP11-15B21, complete sequence
          Length = 192063

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 97    actacatcatcatcaccatcaatct 121
             ||||||||||||||| |||||||||
Sbjct: 58078 actacatcatcatcatcatcaatct 58102



to top

>gb|AY075662.1| Arabidopsis thaliana At2g31940/F20M17.2 mRNA, complete cds
          Length = 546

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  aactacatcatcatcaccatc 116
           |||||||||||||||||||||
Sbjct: 374 aactacatcatcatcaccatc 394



to top

>gb|AC009774.18|AC009774 Homo sapiens 12 BAC RP11-524K8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 153081

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 97    actacatcatcatcaccatca 117
             |||||||||||||||||||||
Sbjct: 35629 actacatcatcatcaccatca 35649



to top

>gb|AY086578.1| Arabidopsis thaliana clone 258917 mRNA, complete sequence
          Length = 525

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  aactacatcatcatcaccatc 116
           |||||||||||||||||||||
Sbjct: 369 aactacatcatcatcaccatc 389



to top

>dbj|AB019234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKN22
          Length = 27229

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 302  gcatgctccaggcaacatctcaccacctt 330
            |||||||| |||||||||||||| |||||
Sbjct: 2197 gcatgctctaggcaacatctcacaacctt 2169



to top

>emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chromosome 2, complete
             sequence
          Length = 174188

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    actacatcatcatcaccatca 117
             |||||||||||||||||||||
Sbjct: 11062 actacatcatcatcaccatca 11042



to top

>ref|NM_125033.3| Arabidopsis thaliana ATP binding / protein binding AT5G56500
            transcript variant AT5G56500.1 mRNA, complete cds
          Length = 2315

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 302  gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 357
            |||||||| |||||||||||||| || || || || || ||||| || ||||||||
Sbjct: 1770 gcatgctctaggcaacatctcacaactttggttggatcaatgattcctgcagccat 1715



to top

>ref|NM_001037006.1| Arabidopsis thaliana ATP binding / protein binding AT5G56500
            transcript variant AT5G56500.2 mRNA, complete cds
          Length = 2355

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 302  gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 357
            |||||||| |||||||||||||| || || || || || ||||| || ||||||||
Sbjct: 1810 gcatgctctaggcaacatctcacaactttggttggatcaatgattcctgcagccat 1755



to top

>ref|NM_130072.2| Arabidopsis thaliana cyclin-dependent protein kinase AT2G45080
           mRNA, complete cds
          Length = 704

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 acatcatcatcaccatcaat 119
           ||||||||||||||||||||
Sbjct: 653 acatcatcatcaccatcaat 672



to top

>gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome 14, complete sequence
          Length = 216566

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 155   ccacatcctctggagagactccac 178
             |||| |||||||||||||||||||
Sbjct: 70428 ccacttcctctggagagactccac 70405



to top

>ref|XM_641134.1| Dictyostelium discoideum hypothetical protein (DDB0216691), partial
           mRNA
          Length = 3039

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 acatcatcatcaccatcaat 119
           ||||||||||||||||||||
Sbjct: 556 acatcatcatcaccatcaat 575



to top

>gb|AC169504.1| Mus musculus BAC clone RP23-416K3 from chromosome 17, complete sequence
          Length = 215554

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    ctacatcatcatcaccatca 117
             ||||||||||||||||||||
Sbjct: 15711 ctacatcatcatcaccatca 15692



to top

>gb|AC119889.13| Mus musculus chromosome 1, clone RP24-220M12, complete sequence
          Length = 153713

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   catcatcatcaccatcaatc 120
             ||||||||||||||||||||
Sbjct: 59298 catcatcatcaccatcaatc 59317



to top

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   tctcgacgaccaccacgtcc 271
             ||||||||||||||||||||
Sbjct: 36065 tctcgacgaccaccacgtcc 36084



to top

>gb|AC117780.5| Mus musculus chromosome 16, clone RP24-540H15, complete sequence
          Length = 153703

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 93     caaaactacatcatcatcaccatc 116
              |||||| |||||||||||||||||
Sbjct: 151235 caaaacaacatcatcatcaccatc 151212



to top

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    tctcgacgaccaccacgtcc 271
              ||||||||||||||||||||
Sbjct: 839910 tctcgacgaccaccacgtcc 839929



to top

>gb|AC129219.3| Mus musculus BAC clone RP24-474C15 from chromosome 14, complete sequence
          Length = 195935

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 155    ccacatcctctggagagactccac 178
              |||| |||||||||||||||||||
Sbjct: 148108 ccacttcctctggagagactccac 148085



to top

>gb|AC116470.12| Mus musculus chromosome 16, clone RP23-383N18, complete sequence
          Length = 194593

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ctctcaaaacttggttcatg 139
             ||||||||||||||||||||
Sbjct: 46054 ctctcaaaacttggttcatg 46073



to top

>gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome 9, complete sequence
          Length = 174764

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   catcatcatcaccatcaatc 120
             ||||||||||||||||||||
Sbjct: 85920 catcatcatcaccatcaatc 85901



to top

>gb|AC129595.3| Mus musculus BAC clone RP23-257H19 from chromosome 7, complete sequence
          Length = 214318

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 127   aacttggttcatgctaccaaaaat 150
             |||||||||||||||| |||||||
Sbjct: 67422 aacttggttcatgctatcaaaaat 67399



to top

>gb|AC131104.3| Mus musculus BAC clone RP23-245G19 from chromosome 12, complete
             sequence
          Length = 151046

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   catcatcatcaccatcaatc 120
             ||||||||||||||||||||
Sbjct: 51396 catcatcatcaccatcaatc 51415



to top

>gb|AC122028.3| Mus musculus BAC clone RP24-394D4 from 2, complete sequence
          Length = 173301

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 94     aaaactacatcatcatcaccatca 117
              |||||||||||||||||| |||||
Sbjct: 145629 aaaactacatcatcatcatcatca 145652



to top

>gb|AY232267.1| Dictyostelium discoideum putative protein Roco5 (roco5) gene,
            complete cds
          Length = 8880

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 101  catcatcatcaccatcaatctctcaaaa 128
            |||||||||||||||||| | |||||||
Sbjct: 5222 catcatcatcaccatcaaccactcaaaa 5249



to top

>emb|BX908811.1| Neurospora crassa DNA linkage group VI Cosmid contig H4H7
          Length = 108058

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   atcatcatcaccatcaatct 121
             ||||||||||||||||||||
Sbjct: 84049 atcatcatcaccatcaatct 84030



to top

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    tctcgacgaccaccacgtcc 271
              ||||||||||||||||||||
Sbjct: 682326 tctcgacgaccaccacgtcc 682345



to top

>emb|AL451022.1|NC2E4 Neurospora crassa DNA linkage group V Cosmid contig 2E4
          Length = 62070

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   catcatcatcaccatcaatc 120
             ||||||||||||||||||||
Sbjct: 53238 catcatcatcaccatcaatc 53219



to top

>emb|AL808115.10| Mouse DNA sequence from clone RP23-224M8 on chromosome X, complete
              sequence
          Length = 163408

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    atcatcatcaccatcaatct 121
              ||||||||||||||||||||
Sbjct: 155608 atcatcatcaccatcaatct 155589



to top

>gb|AC023644.6| Homo sapiens chromosome 8, clone RP11-257P3, complete sequence
          Length = 60057

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   catcatcatcaccatcaatc 120
             ||||||||||||||||||||
Sbjct: 59125 catcatcatcaccatcaatc 59144



to top

>gb|AC163654.2| Mus musculus BAC clone RP23-259M14 from chromosome 16, complete
             sequence
          Length = 159273

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   catcatcatcaccatcaatc 120
             ||||||||||||||||||||
Sbjct: 71096 catcatcatcaccatcaatc 71077



to top

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 322     caccaccttagtggggtcgatgat 345
               ||||||||| ||||||||||||||
Sbjct: 3516159 caccaccttggtggggtcgatgat 3516136



to top

>gb|AC115621.3| Homo sapiens BAC clone RP11-315D13 from 4, complete sequence
          Length = 148726

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     tttttcttatctcaaaacta 100
              ||||||||||||||||||||
Sbjct: 110055 tttttcttatctcaaaacta 110036



to top

>gb|AY074650.1| Arabidopsis thaliana At2g45080/T14P1.11 mRNA, complete cds
          Length = 704

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 acatcatcatcaccatcaat 119
           ||||||||||||||||||||
Sbjct: 653 acatcatcatcaccatcaat 672



to top

>dbj|AK220921.1| Arabidopsis thaliana mRNA for RuBisCO subunit binding-protein beta
           subunit precursor, partial cds, clone: RAFL22-49-H21
          Length = 766

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 302 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 357
           |||||||| |||||||||||||| || || || || || ||||| || ||||||||
Sbjct: 408 gcatgctctaggcaacatctcacaactttggttggatcaatgattcctgcagccat 353



to top

>gb|AC018616.5|AC018616 Homo sapiens chromosome 8, clone RP11-157I4, complete sequence
          Length = 165948

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  catcatcatcaccatcaatc 120
            ||||||||||||||||||||
Sbjct: 1069 catcatcatcaccatcaatc 1088



to top

>emb|BX832336.1|CNS09ZVE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH66ZD09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 916

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 302 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 357
           |||||||| |||||||||||||| || || || || || ||||| || ||||||||
Sbjct: 631 gcatgctctaggcaacatctcacaactttggttggatcaatgattcctgcagccat 576



to top

>emb|BX831822.1|CNS09YNB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH31ZC11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1462

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 302  gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 357
            |||||||| |||||||||||||| || || || || || ||||| || ||||||||
Sbjct: 1164 gcatgctctaggcaacatctcacaactttggttggatcaatgattcctgcagccat 1109



to top

>gb|AF079317.1| Sphingomonas aromaticivorans plasmid pNL1, complete plasmid sequence
          Length = 184457

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 244   ctccttgatctcgacgaccaccac 267
             ||||||||||||| ||||||||||
Sbjct: 73942 ctccttgatctcgccgaccaccac 73965



to top

>gb|AC154383.2| Mus musculus BAC clone RP23-38N16 from chromosome 16, complete sequence
          Length = 205926

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 93    caaaactacatcatcatcaccatc 116
             |||||| |||||||||||||||||
Sbjct: 30259 caaaacaacatcatcatcaccatc 30236



to top

>gb|AF065610.1|AF065610 Toxoplasma gondii strain 76K heat shock protein 60 pseudogene, mRNA
            sequence
          Length = 2442

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 332  gtggggtcgatgataccagcagccatca 359
            |||||||||||||| || ||||||||||
Sbjct: 1633 gtggggtcgatgatgccggcagccatca 1606



to top

>gb|AF065609.1|AF065609 Toxoplasma gondii strain 76K heat shock protein 60 mRNA, complete cds
          Length = 2430

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 332  gtggggtcgatgataccagcagccatca 359
            |||||||||||||| || ||||||||||
Sbjct: 1621 gtggggtcgatgatgccggcagccatca 1594



to top

>gb|AC141643.4| Mus musculus BAC clone RP23-198F6 from chromosome 7, complete sequence
          Length = 237233

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    cgtcaggaaggtcttggcca 293
              ||||||||||||||||||||
Sbjct: 177375 cgtcaggaaggtcttggcca 177394



to top

>gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II section 241 of 255 of the complete
             sequence. Sequence from clones T13E15, T14P1
          Length = 87885

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   acatcatcatcaccatcaat 119
             ||||||||||||||||||||
Sbjct: 58032 acatcatcatcaccatcaat 58051



to top

>emb|BX284649.14| Mouse DNA sequence from clone RP23-42M7 on chromosome 2, complete
              sequence
          Length = 127220

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 94     aaaactacatcatcatcaccatca 117
              |||||||||||||||||| |||||
Sbjct: 114436 aaaactacatcatcatcatcatca 114413



to top

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    tctcgacgaccaccacgtcc 271
              ||||||||||||||||||||
Sbjct: 590826 tctcgacgaccaccacgtcc 590845



to top

>emb|BX000537.11| Mouse DNA sequence from clone RP24-392J24 on chromosome X, complete
            sequence
          Length = 162188

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 150  ttaaaccacatcctctggag 169
            ||||||||||||||||||||
Sbjct: 5328 ttaaaccacatcctctggag 5347



to top

>emb|AL627302.20| Mouse DNA sequence from clone RP23-272D10 on chromosome X, complete
              sequence
          Length = 191439

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     atctcaaaactacatcatca 108
              ||||||||||||||||||||
Sbjct: 140042 atctcaaaactacatcatca 140061


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,130,887
Number of Sequences: 3902068
Number of extensions: 4130887
Number of successful extensions: 100395
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99992
Number of HSP's gapped (non-prelim): 390
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top