ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah59i06 |
|---|---|
| Clone Library Name | barley_pub |
>THI42_MAIZE (Q41739) Thiazole biosynthetic enzyme 1-2, chloroplast precursor| Length = 354 Score = 128 bits (321), Expect = 9e-30 Identities = 62/81 (76%), Positives = 72/81 (88%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGID 278 ++ IVRLTR VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPN +D Sbjct: 269 EDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVD 328 Query: 277 GTLKNVTPALHPEMILAATNN 215 GT+ V+PAL E ++A+ ++ Sbjct: 329 GTIPEVSPALREEFVIASKDD 349
>THI4_CITSI (O23787) Thiazole biosynthetic enzyme, chloroplast precursor| Length = 356 Score = 124 bits (312), Expect = 1e-28 Identities = 63/83 (75%), Positives = 73/83 (87%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGID 278 ++AIVRLTR VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PN +D Sbjct: 273 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALD 332 Query: 277 GTLKNVTPALHPEMILAATNNAD 209 GT +HPE+ILAA ++A+ Sbjct: 333 GT---YVGGVHPELILAAADSAE 352
>THI4_ALNGL (Q38709) Thiazole biosynthetic enzyme, chloroplast precursor (AG6)| Length = 352 Score = 124 bits (312), Expect = 1e-28 Identities = 63/84 (75%), Positives = 73/84 (86%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGID 278 ++AIVRLTR +VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG PN +D Sbjct: 269 EDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALD 328 Query: 277 GTLKNVTPALHPEMILAATNNADI 206 G + +HPE+ILAA ++A+I Sbjct: 329 G---SYVGGIHPELILAAADSAEI 349
>THI4_ARATH (Q38814) Thiazole biosynthetic enzyme, chloroplast precursor (ARA6)| Length = 349 Score = 119 bits (298), Expect = 4e-27 Identities = 63/83 (75%), Positives = 70/83 (84%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGID 278 ++AIVRLTR VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKA LALKALG PN ID Sbjct: 266 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAID 325 Query: 277 GTLKNVTPALHPEMILAATNNAD 209 GTL L PE++LAA ++A+ Sbjct: 326 GTL---VGNLSPELVLAAADSAE 345
>THI41_MAIZE (Q41738) Thiazole biosynthetic enzyme 1-1, chloroplast precursor| Length = 354 Score = 119 bits (297), Expect = 5e-27 Identities = 60/77 (77%), Positives = 68/77 (88%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGID 278 ++ IVRLTR VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPN +D Sbjct: 272 EDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVD 331 Query: 277 GTLKNVTPALHPEMILA 227 GT+ +P L E+++A Sbjct: 332 GTM---SPPLREELMIA 345
>THI4_FUSSH (P23617) Thiazole biosynthetic enzyme, mitochondrial precursor| (Stress-inducible protein sti35) Length = 324 Score = 71.6 bits (174), Expect = 1e-12 Identities = 34/53 (64%), Positives = 45/53 (84%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 299 ++AIV+ TR +VPG+IV GME++E+DGA RMGPTFGAM++SG KAA ALK + Sbjct: 263 EDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEALKVI 315
>THI4_FUSOX (P23618) Thiazole biosynthetic enzyme, mitochondrial precursor| (Stress-inducible protein sti35) Length = 320 Score = 70.1 bits (170), Expect = 3e-12 Identities = 34/51 (66%), Positives = 43/51 (84%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 305 ++AIV+ TR +VPG+IV GME++E+DGA RMGPTFGAM +SG KAA ALK Sbjct: 259 EDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMALSGLKAAEEALK 309
>THI4_UROFA (Q9UVF8) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 338 Score = 69.7 bits (169), Expect = 4e-12 Identities = 31/57 (54%), Positives = 46/57 (80%) Frame = -3 Query: 463 RXKNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 293 R ++ I TR ++PG+IV GME++E DG+ RMGPTFGAM++SG++AA +AL++L R Sbjct: 269 RAEDHIANKTREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQSLDR 325
>THI2_SCHPO (P40998) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 328 Score = 66.2 bits (160), Expect = 4e-11 Identities = 34/52 (65%), Positives = 39/52 (75%) Frame = -3 Query: 463 RXKNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLAL 308 R ++ IV+ TR V PGMIV GME++E DGA RMGPTFG MM SG KAA AL Sbjct: 263 RAEDLIVKGTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSGIKAAQEAL 314
>THI4_ASPOR (Q9UUZ9) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 327 Score = 64.7 bits (156), Expect = 1e-10 Identities = 32/51 (62%), Positives = 41/51 (80%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 305 ++AIV+ TR V G+I+ GME++EIDG RMGPTFGAM++SG KAA ALK Sbjct: 266 EDAIVKNTREVTKGLIIGGMELSEIDGFNRMGPTFGAMVLSGVKAAEEALK 316
>THI4_AERPE (Q9Y9Z0) Putative thiazole biosynthetic enzyme| Length = 274 Score = 63.9 bits (154), Expect = 2e-10 Identities = 30/56 (53%), Positives = 41/56 (73%) Frame = -3 Query: 463 RXKNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 296 R ++ +V T V PG++V G+ VAE+ G PRMGPTFGAM++SG+KAA L + LG Sbjct: 206 RSEDLVVEKTGEVYPGLVVAGIAVAEVYGLPRMGPTFGAMLLSGEKAAALIGEKLG 261
>THI4_PYRHO (O59082) Putative thiazole biosynthetic enzyme| Length = 255 Score = 57.4 bits (137), Expect = 2e-08 Identities = 29/49 (59%), Positives = 33/49 (67%) Frame = -3 Query: 445 VRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 299 V+ TR V PG+ VTGM I GAPRMGP FG M +SG+KAA LK L Sbjct: 205 VKNTREVFPGLYVTGMAANAIAGAPRMGPIFGGMFLSGRKAAQEILKKL 253
>THI4_PYRFU (Q8U0Q5) Putative thiazole biosynthetic enzyme| Length = 252 Score = 55.8 bits (133), Expect = 5e-08 Identities = 27/50 (54%), Positives = 33/50 (66%) Frame = -3 Query: 445 VRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 296 V T+ V PG+ VTGM + GAPRMGP FG M +SG+KAA L+ LG Sbjct: 202 VENTKEVFPGLYVTGMAANAVSGAPRMGPIFGGMFLSGRKAAMEILQKLG 251
>THI4_PYRKO (Q5JD25) Putative thiazole biosynthetic enzyme| Length = 251 Score = 55.5 bits (132), Expect = 7e-08 Identities = 27/51 (52%), Positives = 34/51 (66%) Frame = -3 Query: 445 VRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 293 V TR V PG+ TGM + GAPRMGP FG M++SG+KAA L+ LG+ Sbjct: 201 VEHTREVFPGLYATGMAANALAGAPRMGPIFGGMLLSGRKAALEILQKLGK 251
>THI4_PYRAB (Q9V0J8) Putative thiazole biosynthetic enzyme| Length = 252 Score = 55.1 bits (131), Expect = 9e-08 Identities = 28/49 (57%), Positives = 32/49 (65%) Frame = -3 Query: 445 VRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 299 V TR V PG+ VTGM I GAPRMGP FG M +SG+KAA L+ L Sbjct: 202 VENTREVFPGLYVTGMAANAIAGAPRMGPIFGGMFLSGKKAAQEILEKL 250
>THI4_METAC (Q8TM19) Putative thiazole biosynthetic enzyme| Length = 260 Score = 54.3 bits (129), Expect = 2e-07 Identities = 26/49 (53%), Positives = 32/49 (65%) Frame = -3 Query: 445 VRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 299 V T+ + PG+IV GM APRMGP FG M++SG+KAA LAL L Sbjct: 209 VNATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257
>THI4_METMA (Q8Q0B5) Putative thiazole biosynthetic enzyme| Length = 260 Score = 53.5 bits (127), Expect = 3e-07 Identities = 26/49 (53%), Positives = 32/49 (65%) Frame = -3 Query: 445 VRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 299 V T+ + PG+IV GM APRMGP FG M++SG+KAA LAL L Sbjct: 209 VDATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257
>THI4_THEMA (Q9WZP4) Putative thiazole biosynthetic enzyme| Length = 250 Score = 53.1 bits (126), Expect = 4e-07 Identities = 23/50 (46%), Positives = 33/50 (66%) Frame = -3 Query: 448 IVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 299 +V T + PG++V+GM V + G PRMGP FG M++SGQK A + + L Sbjct: 200 VVDNTGEIFPGLLVSGMAVCAVHGGPRMGPIFGGMILSGQKVARIVSERL 249
>THI4_METTH (O27657) Putative thiazole biosynthetic enzyme| Length = 266 Score = 50.8 bits (120), Expect = 2e-06 Identities = 22/51 (43%), Positives = 33/51 (64%) Frame = -3 Query: 451 AIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 299 A++ TR V P + V GM + GAPRMGP FG M++SG++ A + ++ L Sbjct: 215 ALIENTREVYPNLYVAGMASNAVYGAPRMGPIFGGMLVSGRRVAEMIIEKL 265
>THI4_YEAST (P32318) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 326 Score = 49.7 bits (117), Expect = 4e-06 Identities = 25/40 (62%), Positives = 27/40 (67%) Frame = -3 Query: 424 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 305 V M GMEVAE+DG RMGPTFGAM +SG AA LK Sbjct: 283 VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILK 322
>THI4_ARCFU (O29556) Putative thiazole biosynthetic enzyme| Length = 260 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/50 (44%), Positives = 30/50 (60%) Frame = -3 Query: 448 IVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 299 IV T +V G+ GM VA + PRMGP FG M++SG+K A + + L Sbjct: 209 IVEKTGKIVKGLYAAGMAVAAVHNLPRMGPIFGGMLLSGKKVAEIVAEDL 258
>THI4_HALSA (Q9HMC7) Putative thiazole biosynthetic enzyme| Length = 310 Score = 47.0 bits (110), Expect = 3e-05 Identities = 21/53 (39%), Positives = 33/53 (62%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 299 ++ +V T V G++ G+ A + G RMGPTFGAM++SG+ AA+ + L Sbjct: 238 EDKVVEQTGKVHDGLVTAGLSTATVHGLTRMGPTFGAMLLSGKVAANAVMDEL 290
>THI4_POPEU (P84548) Thiazole biosynthetic enzyme (Fragments)| Length = 48 Score = 46.2 bits (108), Expect = 4e-05 Identities = 22/30 (73%), Positives = 26/30 (86%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPR 368 ++ IV+ R +VPGMIVTGMEVAEIDGAPR Sbjct: 19 EDLIVKGGREIVPGMIVTGMEVAEIDGAPR 48
>THI4_METMP (Q6LXJ8) Putative thiazole biosynthetic enzyme| Length = 262 Score = 45.8 bits (107), Expect = 6e-05 Identities = 23/55 (41%), Positives = 31/55 (56%) Frame = -3 Query: 463 RXKNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 299 + +N++ R TR V PG+ V GM RMG FG M +SG+K A L L+ L Sbjct: 205 KGENSLTRNTREVFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAELILEKL 259
>THI4_METJA (Q58018) Putative thiazole biosynthetic enzyme| Length = 263 Score = 42.7 bits (99), Expect = 5e-04 Identities = 22/55 (40%), Positives = 30/55 (54%) Frame = -3 Query: 463 RXKNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 299 + +NA++R TR V P + V GM G RMG FG M +SG+ A L + L Sbjct: 205 KGENALLRNTREVYPNLFVCGMAANASHGGYRMGAIFGGMYLSGKLCAELITEKL 259
>GSCL_HUMAN (O15499) Homeobox protein goosecoid-like (GSC-2)| Length = 205 Score = 32.7 bits (73), Expect = 0.50 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +3 Query: 285 PFGRPRA---LSARCAAFWPEIIMAPKVGPILGAPSISATSMPVTIMPGTTXRVRRTMAF 455 P G P A L AR A WP + + P V LGAP+ + ++P + PG+ R RR Sbjct: 76 PCGPPEAAAGLGARLA--WP-LRLGPAVPLSLGAPAGGSGALPGAVGPGSQRRTRRHRTI 132 Query: 456 F 458 F Sbjct: 133 F 133
>RPOB_LEPBI (Q9KK59) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1228 Score = 31.6 bits (70), Expect = 1.1 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 281 ++ ++R+ V PG I+ GM + G + P + + I G+KA + +L PNG Sbjct: 878 ESGVIRVGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKEVRDSSLRMPNGF 935 Query: 280 DGTLKNV 260 +GT+ ++ Sbjct: 936 EGTVIDI 942
>RPOB_LEPIN (Q8F0S2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1226 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 281 + ++R+ V PG I+ GM + G + P + + I G+KA + +L PNG Sbjct: 876 ETGVIRIGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGF 933 Query: 280 DGTLKNV 260 +GT+ ++ Sbjct: 934 EGTVIDI 940
>RPOB_LEPIC (Q72UA8) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1226 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 281 + ++R+ V PG I+ GM + G + P + + I G+KA + +L PNG Sbjct: 876 ETGVIRIGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGF 933 Query: 280 DGTLKNV 260 +GT+ ++ Sbjct: 934 EGTVIDI 940
>RPOB_BORGA (Q661M9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1155 Score = 30.8 bits (68), Expect = 1.9 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMM-ISGQKAAHLALKALGRPNGI 281 +N I+R+ V PG I+ G + +G + P F + I G+KA + +L P+G Sbjct: 816 ENGIIRIGTYVKPGDILVGKVTPKSEGD--ITPEFRLLTSIFGEKAKDVKNNSLKVPHGT 873 Query: 280 DGTLKNV 260 +GT+ +V Sbjct: 874 EGTVIDV 880
>RPOB_BORBU (Q59191) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1155 Score = 30.8 bits (68), Expect = 1.9 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMM-ISGQKAAHLALKALGRPNGI 281 +N I+R+ V PG I+ G + +G + P F + I G+KA + +L P+G Sbjct: 816 ENGIIRIGTYVKPGDILVGKVTPKSEGD--ITPEFRLLTSIFGEKAKDVKNNSLKVPHGT 873 Query: 280 DGTLKNV 260 +GT+ +V Sbjct: 874 EGTVIDV 880
>ARNB_PSEU2 (Q4ZSZ4) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate| aminotransferase (EC 2.6.1.-) (UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase) (UDP-Ara4O aminotransferase) (Polymyxin resistance protein pmrH) Length = 382 Score = 29.6 bits (65), Expect = 4.2 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Frame = -3 Query: 448 IVRLTRXVVPGMIVTGMEVAEIDG--APRMGPTFGAMMISGQKAAHLALKALG 296 I +TR + G I TG E +++ A R+G + S A H+AL ALG Sbjct: 18 IAAVTRVLRSGWITTGPECQKLEEEFAARVGARHAVALSSATGAMHVALLALG 70
>CN159_MOUSE (Q8BH86) Protein C14orf159 homolog, mitochondrial precursor| Length = 617 Score = 29.6 bits (65), Expect = 4.2 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Frame = +3 Query: 108 HIGKPSSLSILCFTEPSY-*FVAPKHQLVAYFFXMSALLVAARIISGCSAGVTFLSVPSM 284 HIG P L I ++P Y +V + + V F+ + L + + C A + F S P Sbjct: 195 HIGDPGLLGIEALSKPDYGSYVECRPEDVPVFW--PSPLTSLEAVISCKAPLAFASPPGC 252 Query: 285 PFGRPRALSARCAAFWPEIIMAPKVGPILGAP 380 P+ ++ + PE M P+V I P Sbjct: 253 MVMVPKDTASSASCLTPE--MVPEVHAISKDP 282
>RPOBC_HELHP (Q7VJ82) Bifunctional DNA-directed RNA polymerase, beta and beta'| chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit); DNA-directed RNA polymerase beta' chain (Transcri Length = 2894 Score = 29.3 bits (64), Expect = 5.5 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Frame = -3 Query: 457 KNAIVRLTRXVVPGMIVTGMEVAEIDGAPRMGPTFGAMM---ISGQKAAHLALKALGRPN 287 ++ IVR+ V GMI+ G ++ + PT + I G+KA H+ K+L P Sbjct: 878 ESGIVRIGTYVSAGMILVG----KVSPKGEVKPTPEERLLRAIFGEKAGHVVNKSLYCPP 933 Query: 286 GIDGTLKNV 260 ++GT+ +V Sbjct: 934 SLEGTVVDV 942
>SYFB_AZOSE (Q5P7Y0) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 792 Score = 28.5 bits (62), Expect = 9.4 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +2 Query: 197 FFXDVGVVGRRQDHLRVQRRGNVLERPVDAVRPAEGLERQVRRLL 331 FF + GR + + V + ER VD PA +ER R +L Sbjct: 336 FFAPAAIAGRARSYGFVSDASHRFERGVDFELPARAIERATRLIL 380
>ENPP2_HUMAN (Q13822) Ectonucleotide pyrophosphatase/phosphodiesterase 2 (E-NPP| 2) (Phosphodiesterase I/nucleotide pyrophosphatase 2) (Phosphodiesterase I alpha) (PD-Ialpha) (Autotaxin) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide pyro Length = 863 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +2 Query: 236 HLRVQRRGNVLERPVDAVRPAEGLERQVRRLLAGDHHGAEGRAHSRGTVDLG 391 HL V+RR +V +P+D + G + GD HG + + +S TV +G Sbjct: 445 HLLVERRWHVARKPLDVYKKPSG-----KCFFQGD-HGFDNKVNSMQTVFVG 490
>AATM_MOUSE (P05202) Aspartate aminotransferase, mitochondrial precursor (EC| 2.6.1.1) (Transaminase A) (Glutamate oxaloacetate transaminase 2) Length = 430 Score = 28.5 bits (62), Expect = 9.4 Identities = 20/54 (37%), Positives = 29/54 (53%) Frame = +3 Query: 213 ALLVAARIISGCSAGVTFLSVPSMPFGRPRALSARCAAFWPEIIMAPKVGPILG 374 ALL ++RI+SG +A + G A SAR +++W + M P PILG Sbjct: 2 ALLHSSRILSGMAA--------AFHPGLAAAASARASSWWTHVEMGPP-DPILG 46
>ENPP2_MOUSE (Q9R1E6) Ectonucleotide pyrophosphatase/phosphodiesterase 2 (E-NPP| 2) (Phosphodiesterase I/nucleotide pyrophosphatase 2) (Phosphodiesterase I alpha) (PD-Ialpha) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide pyrophosphatase Length = 862 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +2 Query: 236 HLRVQRRGNVLERPVDAVRPAEGLERQVRRLLAGDHHGAEGRAHSRGTVDLG 391 HL V+RR +V +P+D + G + GD HG + + +S TV +G Sbjct: 444 HLLVERRWHVARKPLDVYKKPSG-----KCFFQGD-HGFDNKVNSMQTVFVG 489
>EMRB_HAEIN (P44927) Multidrug resistance protein B homolog| Length = 510 Score = 28.5 bits (62), Expect = 9.4 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = +3 Query: 219 LVAARIISGCSAG-VTFLSVPSMPFGRPRALSARCAAFWP-EIIMAPKVGPILG 374 L+ R+I G AG V LS + P AFW I++AP GPILG Sbjct: 109 LIIFRVIQGAVAGPVIPLSQSLLLNNYPPEKRGMALAFWSMTIVVAPIFGPILG 162
>CCR10_MOUSE (Q9JL21) C-C chemokine receptor type 10 (C-C CKR-10) (CC-CKR-10)| (CCR-10) (Chemokine C-C receptor 9) (G-protein coupled receptor 2) Length = 362 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = +3 Query: 264 FLSVPSMPFGR--PRALSARCAAFWPEIIMAPKVGPILGAPSISATSMPVTIMPGTTXRV 437 FL++P++ F R PR RC +PE + G A + ++P+ +M + Sbjct: 171 FLALPALLFSRDGPREGQRRCRLIFPESLTQTVKGASAVAQVVLGFALPLGVMAACYALL 230 Query: 438 RRTM 449 RT+ Sbjct: 231 GRTL 234 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,016,082 Number of Sequences: 219361 Number of extensions: 1078952 Number of successful extensions: 3371 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 3260 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3360 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
