ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah59d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ... 366 e-101
2RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a... 292 6e-79
3RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ... 291 1e-78
4RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a... 287 2e-77
5RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ... 256 4e-68
6RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a... 254 1e-67
7RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a... 241 1e-63
8RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a... 241 2e-63
9RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ... 240 3e-63
10RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a... 238 8e-63
11RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ... 238 1e-62
12RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ... 234 2e-61
13RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a... 229 4e-60
14RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a... 221 1e-57
15RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a... 189 8e-48
16RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a... 162 8e-40
17RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a... 130 2e-30
18RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a... 125 1e-28
19RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase a... 47 5e-05
20ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2... 31 3.5
21LEPA_HELPY (O25122) GTP-binding protein lepA 30 4.5
22YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC... 30 4.5
23GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 pre... 30 5.9
24LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 p... 30 7.7
25CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like m... 30 7.7
26S20AB_XENLA (Q6PB26) Sodium-dependent phosphate transporter 1-B ... 30 7.7
27SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... 30 7.7

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  366 bits (939), Expect = e-101
 Identities = 177/177 (100%), Positives = 177/177 (100%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV
Sbjct: 288 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 347

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM
Sbjct: 348 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 407

Query: 270 SQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 100
           SQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 408 SQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464



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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  292 bits (747), Expect = 6e-79
 Identities = 137/177 (77%), Positives = 157/177 (88%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTR+DRIGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEV
Sbjct: 298 GRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEV 357

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           RK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+
Sbjct: 358 RKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYL 417

Query: 270 SQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 100
           SQAALGDAN DA+  G+FYGKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 418 SQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474



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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  291 bits (745), Expect = 1e-78
 Identities = 137/179 (76%), Positives = 157/179 (87%), Gaps = 2/179 (1%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEV
Sbjct: 298 GRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEV 357

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           RKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YM
Sbjct: 358 RKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYM 417

Query: 270 SQAALGDANQDAMKTGSFYGKGAQQ--GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 100
           S+AALGDAN DA+K G+FYG  A Q  G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 418 SEAALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476



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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  287 bits (735), Expect = 2e-77
 Identities = 134/175 (76%), Positives = 154/175 (88%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTR+DRIGVC GIF+TD V  E VVK+VD FPGQSIDFFGALRARVY DEV
Sbjct: 296 GRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEV 355

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           RKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YM
Sbjct: 356 RKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYM 415

Query: 270 SQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 106
           S AALGDAN+DA+  G+F+GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 416 SSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470



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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  256 bits (654), Expect = 4e-68
 Identities = 119/141 (84%), Positives = 133/141 (94%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEV
Sbjct: 285 GRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEV 344

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           RKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+
Sbjct: 345 RKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYL 404

Query: 270 SQAALGDANQDAMKTGSFYGK 208
           S+AALG AN DAMKTG+FYGK
Sbjct: 405 SEAALGQANDDAMKTGAFYGK 425



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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  254 bits (649), Expect = 1e-67
 Identities = 118/140 (84%), Positives = 132/140 (94%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTRDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEV
Sbjct: 288 GRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEV 347

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           RKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+
Sbjct: 348 RKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYL 407

Query: 270 SQAALGDANQDAMKTGSFYG 211
           S+AALGDAN DAMKTGSFYG
Sbjct: 408 SEAALGDANSDAMKTGSFYG 427



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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  241 bits (616), Expect = 1e-63
 Identities = 111/140 (79%), Positives = 130/140 (92%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTR+DRIGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEV
Sbjct: 298 GRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEV 357

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           RKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+
Sbjct: 358 RKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYL 417

Query: 270 SQAALGDANQDAMKTGSFYG 211
           S+AALGDAN DAM TG+FYG
Sbjct: 418 SEAALGDANSDAMNTGTFYG 437



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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  241 bits (614), Expect = 2e-63
 Identities = 110/139 (79%), Positives = 130/139 (93%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTR+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEV
Sbjct: 294 GRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEV 353

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           R+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+
Sbjct: 354 RRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYL 413

Query: 270 SQAALGDANQDAMKTGSFY 214
           ++AALG+AN+DAMKTGSF+
Sbjct: 414 NEAALGEANEDAMKTGSFF 432



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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  240 bits (612), Expect = 3e-63
 Identities = 114/138 (82%), Positives = 128/138 (92%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEV
Sbjct: 302 GRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEV 361

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           RKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+
Sbjct: 362 RKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYL 421

Query: 270 SQAALGDANQDAMKTGSF 217
            +AALGDAN DA+ TG+F
Sbjct: 422 KEAALGDANADAINTGNF 439



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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  238 bits (608), Expect = 8e-63
 Identities = 113/136 (83%), Positives = 128/136 (94%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEV
Sbjct: 297 GRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEV 356

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           RKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+
Sbjct: 357 RKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYL 416

Query: 270 SQAALGDANQDAMKTG 223
            +AALGDAN DA+ TG
Sbjct: 417 KEAALGDANADAINTG 432



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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  238 bits (607), Expect = 1e-62
 Identities = 109/138 (78%), Positives = 128/138 (92%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTR+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEV
Sbjct: 298 GRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEV 357

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           RKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YM
Sbjct: 358 RKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYM 417

Query: 270 SQAALGDANQDAMKTGSF 217
           S+AALGDANQDA+K G+F
Sbjct: 418 SEAALGDANQDAIKRGTF 435



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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  234 bits (597), Expect = 2e-61
 Identities = 112/139 (80%), Positives = 123/139 (88%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTR+DRIGVC GIF+TDNV  E VVKIVD FPGQSIDFFGALRARVYDDEV
Sbjct: 302 GRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEV 361

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           RKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+
Sbjct: 362 RKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYL 421

Query: 270 SQAALGDANQDAMKTGSFY 214
            +AALGDAN DA+  GSF+
Sbjct: 422 KEAALGDANADAINNGSFF 440



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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  229 bits (585), Expect = 4e-60
 Identities = 102/139 (73%), Positives = 128/139 (92%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTRDDR+GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEV
Sbjct: 300 GRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEV 359

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           RKW+   G++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+
Sbjct: 360 RKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYL 419

Query: 270 SQAALGDANQDAMKTGSFY 214
           ++AALG+AN+DA+K+GSF+
Sbjct: 420 NEAALGNANEDAIKSGSFF 438



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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  221 bits (563), Expect = 1e-57
 Identities = 99/139 (71%), Positives = 126/139 (90%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYWAPTR+DRIGVCKGIF+TD V ++ +V++VD  PGQSIDFFGALRARVYDDEV
Sbjct: 302 GRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEV 361

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           RKW+   G++++GK+LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+
Sbjct: 362 RKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYL 421

Query: 270 SQAALGDANQDAMKTGSFY 214
           ++AALG+AN+DA+K+GSF+
Sbjct: 422 NEAALGNANEDAIKSGSFF 440



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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  189 bits (479), Expect = 8e-48
 Identities = 86/115 (74%), Positives = 101/115 (87%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRM+KFYWAPTR+DRIG+C GIF+TD V  E +VK+VDTFPGQSIDFFGALRARVYDDEV
Sbjct: 295 GRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEV 354

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 286
           RKW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 355 RKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409



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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  162 bits (410), Expect = 8e-40
 Identities = 79/125 (63%), Positives = 95/125 (76%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEK+YW PTR+DRIGVC GIFQ DNV    V  +VDTFPGQSIDFFGALRARVYDD V
Sbjct: 271 GRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMV 330

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYM 271
           R+W+  TG++ IG++LVN+R   V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+
Sbjct: 331 RQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYL 389

Query: 270 SQAAL 256
           S A L
Sbjct: 390 SGAEL 394



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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  130 bits (328), Expect = 2e-30
 Identities = 57/119 (47%), Positives = 82/119 (68%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYW P RD+++G+  GIF  D +S   V K+VD+FP QSIDFF ALR+R+YD+++
Sbjct: 171 GRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQI 230

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 274
           R ++   G EN+  R+VNS +GP  F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 231 RDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289



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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  125 bits (314), Expect = 1e-28
 Identities = 56/119 (47%), Positives = 80/119 (67%)
 Frame = -2

Query: 630 GRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV 451
           GRMEKFYW P RDD++G+  GIF  D +S   + ++VDTFP QSIDFF ALR+R+YD ++
Sbjct: 171 GRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQI 230

Query: 450 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 274
           R ++   G E I  R+VNS + P  F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 231 RDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289



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>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -2

Query: 525 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 346
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32



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>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 23) (DHHC-23)
          Length = 409

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
 Frame = +2

Query: 173 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLSCSWTSMCPYSSSF 349
           P G+ K+P  +P   KE       L  P  AW   +   C  R+   C W + C   S+ 
Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301

Query: 350 STVI 361
              I
Sbjct: 302 QAFI 305



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>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = -2

Query: 528 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 349
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 348 KLLEYGHMLVQEQDNVKRV 292
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251



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>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 442 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 567
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44



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>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 278 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 382
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453



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>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -2

Query: 444 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 337
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257



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>CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like mitochondrial|
           protein
          Length = 442

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 19/36 (52%), Positives = 21/36 (58%)
 Frame = -1

Query: 226 WFLLR*RSTARYFARAGRLHRPKCQELRPNGKERRR 119
           +FL R RS  R  AR     R K Q LRPNG E+RR
Sbjct: 139 FFLARDRSAKRERAR-----RRKGQTLRPNGNEQRR 169



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>S20AB_XENLA (Q6PB26) Sodium-dependent phosphate transporter 1-B (Solute carrier|
           family 20 member 1-B)
          Length = 685

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +1

Query: 103 GVKAAAVVAPCRWVVVLGILVG--ATFRHGQSTLLCSFTVEGTSLHRILVSITQSCLAHV 276
           G++   ++AP  W++VLG ++     F  G + +  SF   GT++   +V++ Q+C+   
Sbjct: 15  GIQDVHIMAPYLWMLVLGFVIAFVLAFSVGANDVANSF---GTAVGSGVVTLRQACIL-- 69

Query: 277 GVSKLHTLDIVLL 315
             S   T+  VLL
Sbjct: 70  -ASIFETVGSVLL 81



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>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
            (LeuRS)
          Length = 868

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 4/137 (2%)
 Frame = +1

Query: 214  VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXXEGHGPVP 393
            VEG+  HR L  + +   AHVG     +LDI  L DE   V            +  G   
Sbjct: 671  VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728

Query: 394  RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE- 564
            + +  +A V        +  + V+  + Q+T +   L  EG++ +   L  +T  +  E 
Sbjct: 729  KFNTAVAQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHEL 780

Query: 565  -DTLADTDTVVTGGSPV 612
               L   + V+  G PV
Sbjct: 781  WTQLGHNEPVIDAGWPV 797


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,885,142
Number of Sequences: 219361
Number of extensions: 1703870
Number of successful extensions: 5167
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5164
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5824436538
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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