ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf78i24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os04g0381600:Os04g0381600 | 31 | 0.67 | 2 | AK110478: | 30 | 1.5 | 3 | Os04g0609500:Os04g0609500 | 29 | 2.5 | 4 | Os06g0251100:Os06g0251100 | 28 | 4.3 | 5 | AK070131:Os01g0120500 | 28 | 4.3 | 6 | AK120021:Os04g0635800 | 28 | 5.7 | 7 | AK104741:Os04g0635800 | 28 | 5.7 | 8 | AK099507:Os04g0635800 | 28 | 5.7 | 9 | AK068780:Os01g0931100 | 28 | 5.7 | 10 | AK064791:Os03g0237000 | 28 | 5.7 | 11 | AK060110:Os04g0635800 | 28 | 5.7 | 12 | AK059213:Os01g0931100 | 28 | 5.7 | 13 | AK110490: | 27 | 7.4 | 14 | AK102467:Os01g0747400 | 27 | 7.4 | 15 | AK101356:Os07g0679700 | 27 | 7.4 | 16 | AK099377:Os02g0175900 | 27 | 7.4 | 17 | AK064060:Os02g0175900 | 27 | 7.4 |
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>Os04g0381600:Os04g0381600 | Length = 552 Score = 30.8 bits (68), Expect = 0.67 Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 8/53 (15%) Frame = +3 Query: 18 AYTHDKTEARAS--CRRKPQPRSLLPPPYTFLH--VLVTRFQLP----VHHRP 152 A H KT RA+ CR P P PPP T H +L+ R LP HH P Sbjct: 57 AAPHPKTPRRAAAKCRSSPPPPPPPPPPATLPHLPLLLPRVLLPRRASSHHGP 109
>AK110478: | Length = 881 Score = 29.6 bits (65), Expect = 1.5 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +3 Query: 489 KVHACTSGIDLPHALLMPLHLKTVC 563 ++HA T G+D PH ++ P H + C Sbjct: 61 RLHALTRGVDRPHYVVFPEHFISTC 85
>Os04g0609500:Os04g0609500 | Length = 457 Score = 28.9 bits (63), Expect = 2.5 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = -2 Query: 274 GSPSPGGASWHDPWPAASGH 215 G+ +P AS+H PWPA +G+ Sbjct: 394 GTGAPAFASYHFPWPAGAGY 413
>Os06g0251100:Os06g0251100 | Length = 614 Score = 28.1 bits (61), Expect = 4.3 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = +3 Query: 102 FLHVLVTRFQLPVHHRPGQEAAGDDQGGRGRTFALAGR*PEAAGHGS 242 F HV +PV H P AAGD GGR + ++G H S Sbjct: 438 FAHVCT----VPVKHDPRWLAAGDGGGGRPAAYVVSGAQLHVKAHES 480
>AK070131:Os01g0120500 | Length = 254 Score = 28.1 bits (61), Expect = 4.3 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 78 SLLPPPYTFLHVLVTRFQLPVHHRPGQEAA--GDDQGGRGRTFALA 209 SLLPPP TF+ VL P+ P Q A G RGR +LA Sbjct: 8 SLLPPPSTFVPVL-----SPLRKPPPQHLAIRGSPHRRRGRRLSLA 48
>AK120021:Os04g0635800 | Length = 198 Score = 27.7 bits (60), Expect = 5.7 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 280 HKGSPSPGGASWHDPWPAASGHRPASA 200 H PGG HD PAASG P S+ Sbjct: 164 HHHHHGPGGCCSHDAPPAASGSSPPSS 190
>AK104741:Os04g0635800 | Length = 198 Score = 27.7 bits (60), Expect = 5.7 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 280 HKGSPSPGGASWHDPWPAASGHRPASA 200 H PGG HD PAASG P S+ Sbjct: 164 HHHHHGPGGCCSHDAPPAASGSSPPSS 190
>AK099507:Os04g0635800 | Length = 198 Score = 27.7 bits (60), Expect = 5.7 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 280 HKGSPSPGGASWHDPWPAASGHRPASA 200 H PGG HD PAASG P S+ Sbjct: 164 HHHHHGPGGCCSHDAPPAASGSSPPSS 190
>AK068780:Os01g0931100 | Length = 488 Score = 27.7 bits (60), Expect = 5.7 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = +3 Query: 390 RNRRSSEDKPCGFVI--VYFSVWLPICTILVHWCSKVH 497 +N + + GF I +YFS W+ C ILV + S V+ Sbjct: 181 KNAKVQDQSSSGFSIFRMYFSQWIVACCILVIYLSLVY 218
>AK064791:Os03g0237000 | Length = 595 Score = 27.7 bits (60), Expect = 5.7 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 9 GALAYTHDKTEARASCRRKPQPRSLLPPPY 98 G +A + KTE +A CR PR + P P+ Sbjct: 419 GGIAGKNSKTEFQAPCRTTKYPREIPPLPW 448
>AK060110:Os04g0635800 | Length = 198 Score = 27.7 bits (60), Expect = 5.7 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 280 HKGSPSPGGASWHDPWPAASGHRPASA 200 H PGG HD PAASG P S+ Sbjct: 164 HHHHHGPGGCCSHDAPPAASGSSPPSS 190
>AK059213:Os01g0931100 | Length = 488 Score = 27.7 bits (60), Expect = 5.7 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = +3 Query: 390 RNRRSSEDKPCGFVI--VYFSVWLPICTILVHWCSKVH 497 +N + + GF I +YFS W+ C ILV + S V+ Sbjct: 181 KNAKVQDQSSSGFSIFRMYFSQWIVACCILVIYLSLVY 218
>AK110490: | Length = 1049 Score = 27.3 bits (59), Expect = 7.4 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 3 VGGALAYTHDKTEARASCRRKPQPRSLLPPP 95 V GA + T+ ++S ++P PRS LPPP Sbjct: 486 VSGA-SETYSGLAKKSSLNKRPDPRSSLPPP 515
>AK102467:Os01g0747400 | Length = 637 Score = 27.3 bits (59), Expect = 7.4 Identities = 20/82 (24%), Positives = 31/82 (37%) Frame = +1 Query: 19 PIPMTKQKQEQAAAESPSPALFSLHPTLFFMFSSLDSNFQFITAPARRQPATTKADEDEP 198 P P KQ+ P LF + S+ +F T P RR+P++ A P Sbjct: 234 PKPKPKQRARSPPLRRDVPELFK---------EAKSSSKRFSTPPPRRKPSSPPAPSRSP 284 Query: 199 SHSQGDDRKLPAMDHARKRHQE 264 H R H + +H++ Sbjct: 285 PHVFATARA-----HGKPKHKK 301
>AK101356:Os07g0679700 | Length = 949 Score = 27.3 bits (59), Expect = 7.4 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = -2 Query: 271 SPSPGGASWHDPWPAASG 218 +PSP G W WP SG Sbjct: 26 APSPAGGEWRKGWPLRSG 43
>AK099377:Os02g0175900 | Length = 425 Score = 27.3 bits (59), Expect = 7.4 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = +1 Query: 142 ITAPARRQPATTKAD-EDEPSHSQGDDRKLPAMDHARKR 255 + A A +P TT AD ED+ S+ DD ++P + +++ Sbjct: 167 VNAIAPERPDTTSADDEDDESNGSSDDDEMPVPEEQQEQ 205
>AK064060:Os02g0175900 | Length = 425 Score = 27.3 bits (59), Expect = 7.4 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = +1 Query: 142 ITAPARRQPATTKAD-EDEPSHSQGDDRKLPAMDHARKR 255 + A A +P TT AD ED+ S+ DD ++P + +++ Sbjct: 167 VNAIAPERPDTTSADDEDDESNGSSDDDEMPVPEEQQEQ 205 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,488,826 Number of extensions: 345299 Number of successful extensions: 1230 Number of sequences better than 10.0: 17 Number of HSP's gapped: 1229 Number of HSP's successfully gapped: 17 Length of query: 192 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 97 Effective length of database: 11,595,960 Effective search space: 1124808120 Effective search space used: 1124808120 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
