ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf57k22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001068866.1| Oryza sativa (japonica cultivar-group) Os08g0531100 (Os08g0531100) mRNA, complete cds Length = 2192 Score = 803 bits (405), Expect = 0.0 Identities = 878/1033 (84%), Gaps = 2/1033 (0%) Strand = Plus / Plus Query: 572 gtgatcgcctgtgcaaagttgaagagtataaagttctgatttgcaatttctcaaagatta 631 |||||||||||||||||||||||||||| || ||||| ||| ||| | | ||||||||| Sbjct: 656 gtgatcgcctgtgcaaagttgaagagtacaaggttctcattcacaactacgcaaagatta 715 Query: 632 tggggatggatccctcaaacgttcttgctagtgttcaccccagcttgctaattggagcaa 691 ||||||||||||||||||| | || ||| ||| ||| | |||||| || ||| |||| Sbjct: 716 tggggatggatccctcaaagatcctctctaatgtccacacaagcttgttagatggcgcaa 775 Query: 692 atgaacaacagaaaaagaacatcagtgacgacatccttaacaagctcaatactatggtcc 751 |||| ||||| | ||| ||||||||||| ||||| |||||||||||||| || ||||||| Sbjct: 776 atgatcaacaaacaaaaaacatcagtgatgacattcttaacaagctcaacaccatggtcc 835 Query: 752 agcagcttaaagaagagaagaaccacagactcgaaaagctccacagccttggaaaggcat 811 |||| |||||||||||||||||||| ||| | || |||||||| |||||||| || |||| Sbjct: 836 agcaacttaaagaagagaagaaccagagaatggacaagctccatagccttgggaaagcat 895 Query: 812 tgacaaacttatggaacatactagatattacaatggaagaacgccagccgtacgagcaaa 871 ||||||| |||||||| || || |||| || |||||||| ||| ||| || | ||| Sbjct: 896 tgacaaaattatggaatattctggatactaacatggaagagcgcaggccatatggtgaaa 955 Query: 872 ttaatatattttcattgacttcagcaaatggtatgctaggtcctgaaagtct-agactag 930 |||| |||| |||| ||||||||| || |||||||||| || | ||| || | ||| | Sbjct: 956 ttaagatatattcaatgacttcaggaagcagtatgctaggcccaggaagcctcacactcg 1015 Query: 931 agaaaattcagcagattgaatctgaagttcagcgactagatcagttaaaagcaagcaaaa 990 ||| ||||||| |||| ||||||||||||||||||||||| || |||| |||||||||| Sbjct: 1016 agacaattcagaagatcgaatctgaagttcagcgactagaccatctaaaggcaagcaaaa 1075 Query: 991 tgaaagaattattcatcaagaagaaagctgagattgaggaaatctgcaagatatcccaca 1050 ||||||| | ||||| | ||| || | ||||| ||||||| ||||||| || |||| Sbjct: 1076 tgaaagagctcttcatgataaagcaaaccgagataaaggaaatttgcaagaagtcacaca 1135 Query: 1051 tggatgtgccttaccagacagaaatggacaacataatggaactgataatgtcaggagacg 1110 ||||| |||||||||||||||| ||| |||| |||||||| ||||||||||||| || | Sbjct: 1136 tggatatgccttaccagacagagatgaacaaaataatggatgtgataatgtcaggggatg 1195 Query: 1111 tggaccatgataatctacttaagacaatggatggatatatatacaaaacaaaagaggagg 1170 ||||||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||| Sbjct: 1196 tggaccatgatgatctactaaagacaatggatgaatatatatacaaagtaaaagaggagg 1255 Query: 1171 ccacaagccgtaaagaaataatggacaaagtcgaaaaatggataacttcatgtgatgagg 1230 | ||||| |||||||||||||||||||| || ||||||||||| ||||||||||||| | Sbjct: 1256 caacaagtcgtaaagaaataatggacaaggttgaaaaatggatggcttcatgtgatgaag 1315 Query: 1231 agcgatggctagaagaatacagcagggatgaaagaaggtactcggtaagcagaggagccc 1290 || |||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| | Sbjct: 1316 agagatggctagaagaatacagcagggatgagagaaggtattcgataagcagaggagcac 1375 Query: 1291 acaggcacttgaaacgcgcagaacgtgctagaattatagcaaacaaaattccaggcctgg 1350 | | ||| ||||| || ||||| ||||||||||| || | |||||||| |||||||||| Sbjct: 1376 ataagcatttgaagcgtgcagagcgtgctagaatcattgtgaacaaaatcccaggcctgg 1435 Query: 1351 tagagcttctaattgcaaagacagagatctgggaacatgggagaaagaagatc-ttctac 1409 |||| || |||| ||||||||||||||||||||||| | ||| | ||| || |||||| Sbjct: 1436 tagaactcttaatggcaaagacagagatctgggaacaagagagggaaaaggtctttctac 1495 Query: 1410 tacgacgagcttccccttttggaaatgctgaaacagtacatgttaacactgaaggaaaag 1469 ||||||||||||||||| |||| ||||||||| | |||||| ||||||||||||||||| Sbjct: 1496 tacgacgagcttcccctattggccatgctgaaagactacatgctaacactgaaggaaaag 1555 Query: 1470 gaagaagagagatgcaggcaacgggagaataaaaaggtacagactcaacttgtaaagagg 1529 ||||| || | || ||||||| |||||||||||||||||||||||||||||| || |||| Sbjct: 1556 gaagaggaaaaatacaggcaatgggagaataaaaaggtacagactcaacttgcaaggagg 1615 Query: 1530 aatgaaaattcatttttatcaaggcccaacacaggctgcagtcgtccatccagcagaggc 1589 |||| ||||||||| ||| ||| ||||||||| |||||||||||||||| ||||||||| Sbjct: 1616 catgagaattcatttatattaagacccaacacaagctgcagtcgtccatcaagcagaggc 1675 Query: 1590 ttcaataccagcc 1602 ||||||||||||| Sbjct: 1676 ttcaataccagcc 1688 Score = 478 bits (241), Expect = e-131 Identities = 430/493 (87%) Strand = Plus / Plus Query: 62 ctgcccgagtcctcatctacctacttgcttcaagaactaaagatgatatgggacgaggtt 121 ||||| |||||||||| | ||||| ||||||||||||| |||||||||||||| || ||| Sbjct: 163 ctgccagagtcctcatgtgcctacctgcttcaagaactgaagatgatatgggatgaagtt 222 Query: 122 ggacaagaagaaaacgagagggaaagaatactggaagagttggagcaggagtgccaggaa 181 || ||||||||||| || || || |||||||| ||||| | |||||||| ||||||||| Sbjct: 223 gggcaagaagaaaatgaaagagagagaatacttcaagagatagagcaggaatgccaggaa 282 Query: 182 gtttacaggagaaaagtaaatagtgctaacatgttgcggattcaactgcatcaagcattg 241 ||||| |||||||||||||||||||| || |||| |||||||||||||||||||| ||| Sbjct: 283 gtttataggagaaaagtaaatagtgcaaatatgtctcggattcaactgcatcaagcgttg 342 Query: 242 gctgaatctgaagcagaatttaccaacctacttctttccctcggagaaagatcattccca 301 |||||||| || |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 343 gctgaatccgaggcagaatttaccaacctacttctttctcttggagaaagatcattccca 402 Query: 302 ggccggcctgagaaaatgaacggcactctaaaggagcagctgaattccatcacaccagcc 361 ||||| ||||||||||||| || || ||||||||||||||||||||||||||||||||| Sbjct: 403 ggccgacctgagaaaatgacaggtacgctaaaggagcagctgaattccatcacaccagcc 462 Query: 362 ctgcaagagatgcaaatgaagaaagaagccagactaaaacagttcacagaggttcaggct 421 |||||||| ||||| |||| |||||||||||||| || ||||||| ||||||||| || Sbjct: 463 ctgcaagaaatgcagatgagaaaagaagccagactgaagcagttcagagaggttcaaact 522 Query: 422 gaagttgagagaatcgcctccgaaatagcagggcgctcagagaatgaagttgtcacagta 481 || | | ||||| ||||| ||||||||||| ||| | |||||||||| ||||||| Sbjct: 523 gagatacaaagaattgcctctgaaatagcaggacgccctgagaatgaagccatcacagtg 582 Query: 482 aatgaagatgatttgtcgctcaagaaacttgaggagcaccaaagtgacctgcaaagactt 541 ||| |||| ||| |||| || |||||||| ||||||||||||||||| |||||||| ||| Sbjct: 583 aatcaagaagatctgtcactaaagaaactcgaggagcaccaaagtgaactgcaaaggctt 642 Query: 542 aaaagagaaaaga 554 ||||||||||||| Sbjct: 643 aaaagagaaaaga 655 Score = 89.7 bits (45), Expect = 4e-14 Identities = 68/75 (90%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 1646 tcaacaacctatttcagataa---ctcagctgaaaaagatatgcatataagaaaagttag 1702 ||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 1732 tcaacaacctagtgcagataattcctcagctgaaaaagatgtgcatataagaaaagttag 1791 Query: 1703 ggacagaagtatgca 1717 | ||||||||||||| Sbjct: 1792 gaacagaagtatgca 1806
>dbj|AK067790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119G06, full insert sequence Length = 2193 Score = 803 bits (405), Expect = 0.0 Identities = 878/1033 (84%), Gaps = 2/1033 (0%) Strand = Plus / Plus Query: 572 gtgatcgcctgtgcaaagttgaagagtataaagttctgatttgcaatttctcaaagatta 631 |||||||||||||||||||||||||||| || ||||| ||| ||| | | ||||||||| Sbjct: 658 gtgatcgcctgtgcaaagttgaagagtacaaggttctcattcacaactacgcaaagatta 717 Query: 632 tggggatggatccctcaaacgttcttgctagtgttcaccccagcttgctaattggagcaa 691 ||||||||||||||||||| | || ||| ||| ||| | |||||| || ||| |||| Sbjct: 718 tggggatggatccctcaaagatcctctctaatgtccacacaagcttgttagatggcgcaa 777 Query: 692 atgaacaacagaaaaagaacatcagtgacgacatccttaacaagctcaatactatggtcc 751 |||| ||||| | ||| ||||||||||| ||||| |||||||||||||| || ||||||| Sbjct: 778 atgatcaacaaacaaaaaacatcagtgatgacattcttaacaagctcaacaccatggtcc 837 Query: 752 agcagcttaaagaagagaagaaccacagactcgaaaagctccacagccttggaaaggcat 811 |||| |||||||||||||||||||| ||| | || |||||||| |||||||| || |||| Sbjct: 838 agcaacttaaagaagagaagaaccagagaatggacaagctccatagccttgggaaagcat 897 Query: 812 tgacaaacttatggaacatactagatattacaatggaagaacgccagccgtacgagcaaa 871 ||||||| |||||||| || || |||| || |||||||| ||| ||| || | ||| Sbjct: 898 tgacaaaattatggaatattctggatactaacatggaagagcgcaggccatatggtgaaa 957 Query: 872 ttaatatattttcattgacttcagcaaatggtatgctaggtcctgaaagtct-agactag 930 |||| |||| |||| ||||||||| || |||||||||| || | ||| || | ||| | Sbjct: 958 ttaagatatattcaatgacttcaggaagcagtatgctaggcccaggaagcctcacactcg 1017 Query: 931 agaaaattcagcagattgaatctgaagttcagcgactagatcagttaaaagcaagcaaaa 990 ||| ||||||| |||| ||||||||||||||||||||||| || |||| |||||||||| Sbjct: 1018 agacaattcagaagatcgaatctgaagttcagcgactagaccatctaaaggcaagcaaaa 1077 Query: 991 tgaaagaattattcatcaagaagaaagctgagattgaggaaatctgcaagatatcccaca 1050 ||||||| | ||||| | ||| || | ||||| ||||||| ||||||| || |||| Sbjct: 1078 tgaaagagctcttcatgataaagcaaaccgagataaaggaaatttgcaagaagtcacaca 1137 Query: 1051 tggatgtgccttaccagacagaaatggacaacataatggaactgataatgtcaggagacg 1110 ||||| |||||||||||||||| ||| |||| |||||||| ||||||||||||| || | Sbjct: 1138 tggatatgccttaccagacagagatgaacaaaataatggatgtgataatgtcaggggatg 1197 Query: 1111 tggaccatgataatctacttaagacaatggatggatatatatacaaaacaaaagaggagg 1170 ||||||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||| Sbjct: 1198 tggaccatgatgatctactaaagacaatggatgaatatatatacaaagtaaaagaggagg 1257 Query: 1171 ccacaagccgtaaagaaataatggacaaagtcgaaaaatggataacttcatgtgatgagg 1230 | ||||| |||||||||||||||||||| || ||||||||||| ||||||||||||| | Sbjct: 1258 caacaagtcgtaaagaaataatggacaaggttgaaaaatggatggcttcatgtgatgaag 1317 Query: 1231 agcgatggctagaagaatacagcagggatgaaagaaggtactcggtaagcagaggagccc 1290 || |||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| | Sbjct: 1318 agagatggctagaagaatacagcagggatgagagaaggtattcgataagcagaggagcac 1377 Query: 1291 acaggcacttgaaacgcgcagaacgtgctagaattatagcaaacaaaattccaggcctgg 1350 | | ||| ||||| || ||||| ||||||||||| || | |||||||| |||||||||| Sbjct: 1378 ataagcatttgaagcgtgcagagcgtgctagaatcattgtgaacaaaatcccaggcctgg 1437 Query: 1351 tagagcttctaattgcaaagacagagatctgggaacatgggagaaagaagatc-ttctac 1409 |||| || |||| ||||||||||||||||||||||| | ||| | ||| || |||||| Sbjct: 1438 tagaactcttaatggcaaagacagagatctgggaacaagagagggaaaaggtctttctac 1497 Query: 1410 tacgacgagcttccccttttggaaatgctgaaacagtacatgttaacactgaaggaaaag 1469 ||||||||||||||||| |||| ||||||||| | |||||| ||||||||||||||||| Sbjct: 1498 tacgacgagcttcccctattggccatgctgaaagactacatgctaacactgaaggaaaag 1557 Query: 1470 gaagaagagagatgcaggcaacgggagaataaaaaggtacagactcaacttgtaaagagg 1529 ||||| || | || ||||||| |||||||||||||||||||||||||||||| || |||| Sbjct: 1558 gaagaggaaaaatacaggcaatgggagaataaaaaggtacagactcaacttgcaaggagg 1617 Query: 1530 aatgaaaattcatttttatcaaggcccaacacaggctgcagtcgtccatccagcagaggc 1589 |||| ||||||||| ||| ||| ||||||||| |||||||||||||||| ||||||||| Sbjct: 1618 catgagaattcatttatattaagacccaacacaagctgcagtcgtccatcaagcagaggc 1677 Query: 1590 ttcaataccagcc 1602 ||||||||||||| Sbjct: 1678 ttcaataccagcc 1690 Score = 478 bits (241), Expect = e-131 Identities = 430/493 (87%) Strand = Plus / Plus Query: 62 ctgcccgagtcctcatctacctacttgcttcaagaactaaagatgatatgggacgaggtt 121 ||||| |||||||||| | ||||| ||||||||||||| |||||||||||||| || ||| Sbjct: 165 ctgccagagtcctcatgtgcctacctgcttcaagaactgaagatgatatgggatgaagtt 224 Query: 122 ggacaagaagaaaacgagagggaaagaatactggaagagttggagcaggagtgccaggaa 181 || ||||||||||| || || || |||||||| ||||| | |||||||| ||||||||| Sbjct: 225 gggcaagaagaaaatgaaagagagagaatacttcaagagatagagcaggaatgccaggaa 284 Query: 182 gtttacaggagaaaagtaaatagtgctaacatgttgcggattcaactgcatcaagcattg 241 ||||| |||||||||||||||||||| || |||| |||||||||||||||||||| ||| Sbjct: 285 gtttataggagaaaagtaaatagtgcaaatatgtctcggattcaactgcatcaagcgttg 344 Query: 242 gctgaatctgaagcagaatttaccaacctacttctttccctcggagaaagatcattccca 301 |||||||| || |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 345 gctgaatccgaggcagaatttaccaacctacttctttctcttggagaaagatcattccca 404 Query: 302 ggccggcctgagaaaatgaacggcactctaaaggagcagctgaattccatcacaccagcc 361 ||||| ||||||||||||| || || ||||||||||||||||||||||||||||||||| Sbjct: 405 ggccgacctgagaaaatgacaggtacgctaaaggagcagctgaattccatcacaccagcc 464 Query: 362 ctgcaagagatgcaaatgaagaaagaagccagactaaaacagttcacagaggttcaggct 421 |||||||| ||||| |||| |||||||||||||| || ||||||| ||||||||| || Sbjct: 465 ctgcaagaaatgcagatgagaaaagaagccagactgaagcagttcagagaggttcaaact 524 Query: 422 gaagttgagagaatcgcctccgaaatagcagggcgctcagagaatgaagttgtcacagta 481 || | | ||||| ||||| ||||||||||| ||| | |||||||||| ||||||| Sbjct: 525 gagatacaaagaattgcctctgaaatagcaggacgccctgagaatgaagccatcacagtg 584 Query: 482 aatgaagatgatttgtcgctcaagaaacttgaggagcaccaaagtgacctgcaaagactt 541 ||| |||| ||| |||| || |||||||| ||||||||||||||||| |||||||| ||| Sbjct: 585 aatcaagaagatctgtcactaaagaaactcgaggagcaccaaagtgaactgcaaaggctt 644 Query: 542 aaaagagaaaaga 554 ||||||||||||| Sbjct: 645 aaaagagaaaaga 657 Score = 89.7 bits (45), Expect = 4e-14 Identities = 68/75 (90%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 1646 tcaacaacctatttcagataa---ctcagctgaaaaagatatgcatataagaaaagttag 1702 ||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 1734 tcaacaacctagtgcagataattcctcagctgaaaaagatgtgcatataagaaaagttag 1793 Query: 1703 ggacagaagtatgca 1717 | ||||||||||||| Sbjct: 1794 gaacagaagtatgca 1808
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 232 bits (117), Expect = 4e-57 Identities = 183/205 (89%) Strand = Plus / Plus Query: 102 agatgatatgggacgaggttggacaagaagaaaacgagagggaaagaatactggaagagt 161 ||||||||||||| || ||||| ||||||||||| || || || |||||||| ||||| Sbjct: 26441466 agatgatatgggatgaagttgggcaagaagaaaatgaaagagagagaatacttcaagaga 26441525 Query: 162 tggagcaggagtgccaggaagtttacaggagaaaagtaaatagtgctaacatgttgcgga 221 | |||||||| |||||||||||||| |||||||||||||||||||| || |||| |||| Sbjct: 26441526 tagagcaggaatgccaggaagtttataggagaaaagtaaatagtgcaaatatgtctcgga 26441585 Query: 222 ttcaactgcatcaagcattggctgaatctgaagcagaatttaccaacctacttctttccc 281 |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||| | Sbjct: 26441586 ttcaactgcatcaagcgttggctgaatccgaggcagaatttaccaacctacttctttctc 26441645 Query: 282 tcggagaaagatcattcccaggccg 306 | ||||||||||||||||||||||| Sbjct: 26441646 ttggagaaagatcattcccaggccg 26441670 Score = 212 bits (107), Expect = 4e-51 Identities = 212/247 (85%) Strand = Plus / Plus Query: 307 gcctgagaaaatgaacggcactctaaaggagcagctgaattccatcacaccagccctgca 366 |||||||||||||| || || |||||||||||||||||||||||||||||||||||||| Sbjct: 26441754 gcctgagaaaatgacaggtacgctaaaggagcagctgaattccatcacaccagccctgca 26441813 Query: 367 agagatgcaaatgaagaaagaagccagactaaaacagttcacagaggttcaggctgaagt 426 ||| ||||| |||| |||||||||||||| || ||||||| ||||||||| |||| | Sbjct: 26441814 agaaatgcagatgagaaaagaagccagactgaagcagttcagagaggttcaaactgagat 26441873 Query: 427 tgagagaatcgcctccgaaatagcagggcgctcagagaatgaagttgtcacagtaaatga 486 | ||||| ||||| ||||||||||| ||| | |||||||||| ||||||| ||| | Sbjct: 26441874 acaaagaattgcctctgaaatagcaggacgccctgagaatgaagccatcacagtgaatca 26441933 Query: 487 agatgatttgtcgctcaagaaacttgaggagcaccaaagtgacctgcaaagacttaaaag 546 ||| ||| |||| || |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 26441934 agaagatctgtcactaaagaaactcgaggagcaccaaagtgaactgcaaaggcttaaaag 26441993 Query: 547 agaaaag 553 ||||||| Sbjct: 26441994 agaaaag 26442000 Score = 190 bits (96), Expect = 1e-44 Identities = 135/148 (91%) Strand = Plus / Plus Query: 1110 gtggaccatgataatctacttaagacaatggatggatatatatacaaaacaaaagaggag 1169 |||||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||| Sbjct: 26443153 gtggaccatgatgatctactaaagacaatggatgaatatatatacaaagtaaaagaggag 26443212 Query: 1170 gccacaagccgtaaagaaataatggacaaagtcgaaaaatggataacttcatgtgatgag 1229 || ||||| |||||||||||||||||||| || ||||||||||| ||||||||||||| Sbjct: 26443213 gcaacaagtcgtaaagaaataatggacaaggttgaaaaatggatggcttcatgtgatgaa 26443272 Query: 1230 gagcgatggctagaagaatacagcaggg 1257 ||| |||||||||||||||||||||||| Sbjct: 26443273 gagagatggctagaagaatacagcaggg 26443300 Score = 168 bits (85), Expect = 5e-38 Identities = 175/205 (85%) Strand = Plus / Plus Query: 572 gtgatcgcctgtgcaaagttgaagagtataaagttctgatttgcaatttctcaaagatta 631 |||||||||||||||||||||||||||| || ||||| ||| ||| | | ||||||||| Sbjct: 26442098 gtgatcgcctgtgcaaagttgaagagtacaaggttctcattcacaactacgcaaagatta 26442157 Query: 632 tggggatggatccctcaaacgttcttgctagtgttcaccccagcttgctaattggagcaa 691 ||||||||||||||||||| | || ||| ||| ||| | |||||| || ||| |||| Sbjct: 26442158 tggggatggatccctcaaagatcctctctaatgtccacacaagcttgttagatggcgcaa 26442217 Query: 692 atgaacaacagaaaaagaacatcagtgacgacatccttaacaagctcaatactatggtcc 751 |||| ||||| | ||| ||||||||||| ||||| |||||||||||||| || ||||||| Sbjct: 26442218 atgatcaacaaacaaaaaacatcagtgatgacattcttaacaagctcaacaccatggtcc 26442277 Query: 752 agcagcttaaagaagagaagaacca 776 |||| |||||||||||||||||||| Sbjct: 26442278 agcaacttaaagaagagaagaacca 26442302 Score = 147 bits (74), Expect = 2e-31 Identities = 101/110 (91%) Strand = Plus / Plus Query: 1493 ggagaataaaaaggtacagactcaacttgtaaagaggaatgaaaattcatttttatcaag 1552 ||||||||||||||||||||||||||||| || |||| |||| ||||||||| ||| ||| Sbjct: 26445106 ggagaataaaaaggtacagactcaacttgcaaggaggcatgagaattcatttatattaag 26445165 Query: 1553 gcccaacacaggctgcagtcgtccatccagcagaggcttcaataccagcc 1602 ||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 26445166 acccaacacaagctgcagtcgtccatcaagcagaggcttcaataccagcc 26445215 Score = 119 bits (60), Expect = 4e-23 Identities = 138/164 (84%) Strand = Plus / Plus Query: 942 cagattgaatctgaagttcagcgactagatcagttaaaagcaagcaaaatgaaagaatta 1001 ||||| ||||||||||||||||||||||| || |||| ||||||||||||||||| | Sbjct: 26442890 cagatcgaatctgaagttcagcgactagaccatctaaaggcaagcaaaatgaaagagctc 26442949 Query: 1002 ttcatcaagaagaaagctgagattgaggaaatctgcaagatatcccacatggatgtgcct 1061 ||||| | ||| || | ||||| ||||||| ||||||| || ||||||||| ||||| Sbjct: 26442950 ttcatgataaagcaaaccgagataaaggaaatttgcaagaagtcacacatggatatgcct 26443009 Query: 1062 taccagacagaaatggacaacataatggaactgataatgtcagg 1105 ||||||||||| ||| |||| |||||||| ||||||||||||| Sbjct: 26443010 taccagacagagatgaacaaaataatggatgtgataatgtcagg 26443053 Score = 89.7 bits (45), Expect = 4e-14 Identities = 68/75 (90%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 1646 tcaacaacctatttcagataa---ctcagctgaaaaagatatgcatataagaaaagttag 1702 ||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 26445259 tcaacaacctagtgcagataattcctcagctgaaaaagatgtgcatataagaaaagttag 26445318 Query: 1703 ggacagaagtatgca 1717 | ||||||||||||| Sbjct: 26445319 gaacagaagtatgca 26445333 Score = 67.9 bits (34), Expect = 1e-07 Identities = 52/58 (89%) Strand = Plus / Plus Query: 1417 agcttccccttttggaaatgctgaaacagtacatgttaacactgaaggaaaaggaaga 1474 |||||||||| |||| ||||||||| | |||||| |||||||||||||||||||||| Sbjct: 26444950 agcttcccctattggccatgctgaaagactacatgctaacactgaaggaaaaggaaga 26445007 Score = 60.0 bits (30), Expect = 3e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 1256 ggatgaaagaaggtactcggtaagcagaggagcccacaggcacttgaaacgcgcagaacg 1315 |||||| |||||||| ||| ||||||||||||| || | ||| ||||| || ||||| || Sbjct: 26443374 ggatgagagaaggtattcgataagcagaggagcacataagcatttgaagcgtgcagagcg 26443433 Query: 1316 tgctagaattatagcaaacaaaattccagg 1345 ||||||||| || | |||||||| ||||| Sbjct: 26443434 tgctagaatcattgtgaacaaaatcccagg 26443463 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1342 caggcctggtagagcttctaattgcaaagacagagatctgggaaca 1387 ||||||||||||| || |||| ||||||||||||||||||||||| Sbjct: 26443530 caggcctggtagaactcttaatggcaaagacagagatctgggaaca 26443575 Score = 48.1 bits (24), Expect = 0.12 Identities = 36/40 (90%) Strand = Plus / Plus Query: 788 agctccacagccttggaaaggcattgacaaacttatggaa 827 ||||||| |||||||| || ||||||||||| |||||||| Sbjct: 26442651 agctccatagccttgggaaagcattgacaaaattatggaa 26442690 Score = 44.1 bits (22), Expect = 1.9 Identities = 34/38 (89%) Strand = Plus / Plus Query: 62 ctgcccgagtcctcatctacctacttgcttcaagaact 99 ||||| |||||||||| | ||||| ||||||||||||| Sbjct: 26441338 ctgccagagtcctcatgtgcctacctgcttcaagaact 26441375
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 232 bits (117), Expect = 4e-57 Identities = 183/205 (89%) Strand = Plus / Plus Query: 102 agatgatatgggacgaggttggacaagaagaaaacgagagggaaagaatactggaagagt 161 ||||||||||||| || ||||| ||||||||||| || || || |||||||| ||||| Sbjct: 91018 agatgatatgggatgaagttgggcaagaagaaaatgaaagagagagaatacttcaagaga 91077 Query: 162 tggagcaggagtgccaggaagtttacaggagaaaagtaaatagtgctaacatgttgcgga 221 | |||||||| |||||||||||||| |||||||||||||||||||| || |||| |||| Sbjct: 91078 tagagcaggaatgccaggaagtttataggagaaaagtaaatagtgcaaatatgtctcgga 91137 Query: 222 ttcaactgcatcaagcattggctgaatctgaagcagaatttaccaacctacttctttccc 281 |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||| | Sbjct: 91138 ttcaactgcatcaagcgttggctgaatccgaggcagaatttaccaacctacttctttctc 91197 Query: 282 tcggagaaagatcattcccaggccg 306 | ||||||||||||||||||||||| Sbjct: 91198 ttggagaaagatcattcccaggccg 91222 Score = 212 bits (107), Expect = 4e-51 Identities = 212/247 (85%) Strand = Plus / Plus Query: 307 gcctgagaaaatgaacggcactctaaaggagcagctgaattccatcacaccagccctgca 366 |||||||||||||| || || |||||||||||||||||||||||||||||||||||||| Sbjct: 91306 gcctgagaaaatgacaggtacgctaaaggagcagctgaattccatcacaccagccctgca 91365 Query: 367 agagatgcaaatgaagaaagaagccagactaaaacagttcacagaggttcaggctgaagt 426 ||| ||||| |||| |||||||||||||| || ||||||| ||||||||| |||| | Sbjct: 91366 agaaatgcagatgagaaaagaagccagactgaagcagttcagagaggttcaaactgagat 91425 Query: 427 tgagagaatcgcctccgaaatagcagggcgctcagagaatgaagttgtcacagtaaatga 486 | ||||| ||||| ||||||||||| ||| | |||||||||| ||||||| ||| | Sbjct: 91426 acaaagaattgcctctgaaatagcaggacgccctgagaatgaagccatcacagtgaatca 91485 Query: 487 agatgatttgtcgctcaagaaacttgaggagcaccaaagtgacctgcaaagacttaaaag 546 ||| ||| |||| || |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 91486 agaagatctgtcactaaagaaactcgaggagcaccaaagtgaactgcaaaggcttaaaag 91545 Query: 547 agaaaag 553 ||||||| Sbjct: 91546 agaaaag 91552 Score = 190 bits (96), Expect = 1e-44 Identities = 135/148 (91%) Strand = Plus / Plus Query: 1110 gtggaccatgataatctacttaagacaatggatggatatatatacaaaacaaaagaggag 1169 |||||||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||| Sbjct: 92705 gtggaccatgatgatctactaaagacaatggatgaatatatatacaaagtaaaagaggag 92764 Query: 1170 gccacaagccgtaaagaaataatggacaaagtcgaaaaatggataacttcatgtgatgag 1229 || ||||| |||||||||||||||||||| || ||||||||||| ||||||||||||| Sbjct: 92765 gcaacaagtcgtaaagaaataatggacaaggttgaaaaatggatggcttcatgtgatgaa 92824 Query: 1230 gagcgatggctagaagaatacagcaggg 1257 ||| |||||||||||||||||||||||| Sbjct: 92825 gagagatggctagaagaatacagcaggg 92852 Score = 168 bits (85), Expect = 5e-38 Identities = 175/205 (85%) Strand = Plus / Plus Query: 572 gtgatcgcctgtgcaaagttgaagagtataaagttctgatttgcaatttctcaaagatta 631 |||||||||||||||||||||||||||| || ||||| ||| ||| | | ||||||||| Sbjct: 91650 gtgatcgcctgtgcaaagttgaagagtacaaggttctcattcacaactacgcaaagatta 91709 Query: 632 tggggatggatccctcaaacgttcttgctagtgttcaccccagcttgctaattggagcaa 691 ||||||||||||||||||| | || ||| ||| ||| | |||||| || ||| |||| Sbjct: 91710 tggggatggatccctcaaagatcctctctaatgtccacacaagcttgttagatggcgcaa 91769 Query: 692 atgaacaacagaaaaagaacatcagtgacgacatccttaacaagctcaatactatggtcc 751 |||| ||||| | ||| ||||||||||| ||||| |||||||||||||| || ||||||| Sbjct: 91770 atgatcaacaaacaaaaaacatcagtgatgacattcttaacaagctcaacaccatggtcc 91829 Query: 752 agcagcttaaagaagagaagaacca 776 |||| |||||||||||||||||||| Sbjct: 91830 agcaacttaaagaagagaagaacca 91854 Score = 147 bits (74), Expect = 2e-31 Identities = 101/110 (91%) Strand = Plus / Plus Query: 1493 ggagaataaaaaggtacagactcaacttgtaaagaggaatgaaaattcatttttatcaag 1552 ||||||||||||||||||||||||||||| || |||| |||| ||||||||| ||| ||| Sbjct: 94658 ggagaataaaaaggtacagactcaacttgcaaggaggcatgagaattcatttatattaag 94717 Query: 1553 gcccaacacaggctgcagtcgtccatccagcagaggcttcaataccagcc 1602 ||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 94718 acccaacacaagctgcagtcgtccatcaagcagaggcttcaataccagcc 94767 Score = 119 bits (60), Expect = 4e-23 Identities = 138/164 (84%) Strand = Plus / Plus Query: 942 cagattgaatctgaagttcagcgactagatcagttaaaagcaagcaaaatgaaagaatta 1001 ||||| ||||||||||||||||||||||| || |||| ||||||||||||||||| | Sbjct: 92442 cagatcgaatctgaagttcagcgactagaccatctaaaggcaagcaaaatgaaagagctc 92501 Query: 1002 ttcatcaagaagaaagctgagattgaggaaatctgcaagatatcccacatggatgtgcct 1061 ||||| | ||| || | ||||| ||||||| ||||||| || ||||||||| ||||| Sbjct: 92502 ttcatgataaagcaaaccgagataaaggaaatttgcaagaagtcacacatggatatgcct 92561 Query: 1062 taccagacagaaatggacaacataatggaactgataatgtcagg 1105 ||||||||||| ||| |||| |||||||| ||||||||||||| Sbjct: 92562 taccagacagagatgaacaaaataatggatgtgataatgtcagg 92605 Score = 89.7 bits (45), Expect = 4e-14 Identities = 68/75 (90%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 1646 tcaacaacctatttcagataa---ctcagctgaaaaagatatgcatataagaaaagttag 1702 ||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 94811 tcaacaacctagtgcagataattcctcagctgaaaaagatgtgcatataagaaaagttag 94870 Query: 1703 ggacagaagtatgca 1717 | ||||||||||||| Sbjct: 94871 gaacagaagtatgca 94885 Score = 67.9 bits (34), Expect = 1e-07 Identities = 52/58 (89%) Strand = Plus / Plus Query: 1417 agcttccccttttggaaatgctgaaacagtacatgttaacactgaaggaaaaggaaga 1474 |||||||||| |||| ||||||||| | |||||| |||||||||||||||||||||| Sbjct: 94502 agcttcccctattggccatgctgaaagactacatgctaacactgaaggaaaaggaaga 94559 Score = 60.0 bits (30), Expect = 3e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 1256 ggatgaaagaaggtactcggtaagcagaggagcccacaggcacttgaaacgcgcagaacg 1315 |||||| |||||||| ||| ||||||||||||| || | ||| ||||| || ||||| || Sbjct: 92926 ggatgagagaaggtattcgataagcagaggagcacataagcatttgaagcgtgcagagcg 92985 Query: 1316 tgctagaattatagcaaacaaaattccagg 1345 ||||||||| || | |||||||| ||||| Sbjct: 92986 tgctagaatcattgtgaacaaaatcccagg 93015 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1342 caggcctggtagagcttctaattgcaaagacagagatctgggaaca 1387 ||||||||||||| || |||| ||||||||||||||||||||||| Sbjct: 93082 caggcctggtagaactcttaatggcaaagacagagatctgggaaca 93127 Score = 48.1 bits (24), Expect = 0.12 Identities = 36/40 (90%) Strand = Plus / Plus Query: 788 agctccacagccttggaaaggcattgacaaacttatggaa 827 ||||||| |||||||| || ||||||||||| |||||||| Sbjct: 92203 agctccatagccttgggaaagcattgacaaaattatggaa 92242 Score = 44.1 bits (22), Expect = 1.9 Identities = 34/38 (89%) Strand = Plus / Plus Query: 62 ctgcccgagtcctcatctacctacttgcttcaagaact 99 ||||| |||||||||| | ||||| ||||||||||||| Sbjct: 90890 ctgccagagtcctcatgtgcctacctgcttcaagaact 90927
>ref|NM_001068867.1| Oryza sativa (japonica cultivar-group) Os08g0531200 (Os08g0531200) mRNA, complete cds Length = 3155 Score = 147 bits (74), Expect = 2e-31 Identities = 101/110 (91%) Strand = Plus / Minus Query: 1493 ggagaataaaaaggtacagactcaacttgtaaagaggaatgaaaattcatttttatcaag 1552 ||||||||||||||||||||||||||||| || |||| |||| ||||||||| ||| ||| Sbjct: 2938 ggagaataaaaaggtacagactcaacttgcaaggaggcatgagaattcatttatattaag 2879 Query: 1553 gcccaacacaggctgcagtcgtccatccagcagaggcttcaataccagcc 1602 ||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 2878 acccaacacaagctgcagtcgtccatcaagcagaggcttcaataccagcc 2829 Score = 67.9 bits (34), Expect = 1e-07 Identities = 52/58 (89%) Strand = Plus / Minus Query: 1417 agcttccccttttggaaatgctgaaacagtacatgttaacactgaaggaaaaggaaga 1474 |||||||||| |||| ||||||||| | |||||| |||||||||||||||||||||| Sbjct: 3094 agcttcccctattggccatgctgaaagactacatgctaacactgaaggaaaaggaaga 3037
>dbj|AK120362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067O11, full insert sequence Length = 3156 Score = 147 bits (74), Expect = 2e-31 Identities = 101/110 (91%) Strand = Plus / Minus Query: 1493 ggagaataaaaaggtacagactcaacttgtaaagaggaatgaaaattcatttttatcaag 1552 ||||||||||||||||||||||||||||| || |||| |||| ||||||||| ||| ||| Sbjct: 2939 ggagaataaaaaggtacagactcaacttgcaaggaggcatgagaattcatttatattaag 2880 Query: 1553 gcccaacacaggctgcagtcgtccatccagcagaggcttcaataccagcc 1602 ||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 2879 acccaacacaagctgcagtcgtccatcaagcagaggcttcaataccagcc 2830 Score = 67.9 bits (34), Expect = 1e-07 Identities = 52/58 (89%) Strand = Plus / Minus Query: 1417 agcttccccttttggaaatgctgaaacagtacatgttaacactgaaggaaaaggaaga 1474 |||||||||| |||| ||||||||| | |||||| |||||||||||||||||||||| Sbjct: 3095 agcttcccctattggccatgctgaaagactacatgctaacactgaaggaaaaggaaga 3038
>emb|CT737180.5| M.truncatula DNA sequence from clone MTH2-117L19 on chromosome 3, complete sequence Length = 130239 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 1222 gtgatgaggagcgatggctagaagaatacagca 1254 ||||||||||||| ||||||||||||||||||| Sbjct: 10512 gtgatgaggagcgctggctagaagaatacagca 10544
>gb|AC192111.3| Pan troglodytes BAC clone CH251-726H14 from chromosome x, complete sequence Length = 184691 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 696 acaacagaaaaagaacatcagtga 719 |||||||||||||||||||||||| Sbjct: 154162 acaacagaaaaagaacatcagtga 154139
>emb|AL034406.1|HS571B2 Human DNA sequence from clone RP4-571B2 on chromosome Xq21.1-21.33 Contains part of the DACH2 gene for dachsund homolog 2 (Drosophila), complete sequence Length = 146111 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Plus Query: 696 acaacagaaaaagaacatcagtga 719 |||||||||||||||||||||||| Sbjct: 25215 acaacagaaaaagaacatcagtga 25238
>ref|NM_102557.1| Arabidopsis thaliana unknown protein (AT1G27920) mRNA, complete cds Length = 1779 Score = 46.1 bits (23), Expect = 0.48 Identities = 65/79 (82%) Strand = Plus / Plus Query: 935 aattcagcagattgaatctgaagttcagcgactagatcagttaaaagcaagcaaaatgaa 994 |||||||||| ||| ||||||| || |||||||||| | |||||||||| ||| || Sbjct: 996 aattcagcaggctgaggctgaagtcaagagactagatcaactgaaagcaagcagaatcaa 1055 Query: 995 agaattattcatcaagaag 1013 |||| | |||||||||||| Sbjct: 1056 agaacttttcatcaagaag 1074
>ref|NM_124539.2| Arabidopsis thaliana PLE (PLEIADE) (PLE) mRNA, complete cds Length = 2274 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Plus Query: 976 taaaagcaagcaaaatgaaagaa 998 ||||||||||||||||||||||| Sbjct: 929 taaaagcaagcaaaatgaaagaa 951
>gb|AC098731.3| Mus musculus BAC clone RP23-3L10 from 9, complete sequence Length = 220184 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 543 aaagagaaaagattttattttat 565 ||||||||||||||||||||||| Sbjct: 123145 aaagagaaaagattttattttat 123123
>dbj|AK085150.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430044H24 product:hypothetical protein, full insert sequence Length = 2140 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 543 aaagagaaaagattttattttat 565 ||||||||||||||||||||||| Sbjct: 1713 aaagagaaaagattttattttat 1691
>emb|AL137245.11| Human DNA sequence from clone RP11-196I2 on chromosome 13 Contains a novel gene, complete sequence Length = 146994 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 626 agattatggggatggatccctca 648 ||||||||||||||||||||||| Sbjct: 50056 agattatggggatggatccctca 50034
>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3, complete sequence Length = 241961 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1137 atggatggatatatatacaaaac 1159 ||||||||||||||||||||||| Sbjct: 89631 atggatggatatatatacaaaac 89653
>dbj|AB018109.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K17N15 Length = 81293 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 976 taaaagcaagcaaaatgaaagaa 998 ||||||||||||||||||||||| Sbjct: 61283 taaaagcaagcaaaatgaaagaa 61261
>emb|AL807252.5| Mouse DNA sequence from clone RP23-456B18 on chromosome 4, complete sequence Length = 195718 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 138 agagggaaagaatactggaagag 160 ||||||||||||||||||||||| Sbjct: 136867 agagggaaagaatactggaagag 136845
>gb|AC175455.3| Myotis lucifugus, clone XX-29880257P1, complete sequence Length = 36096 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 874 aatatattttcattgacttcag 895 |||||||||||||||||||||| Sbjct: 18430 aatatattttcattgacttcag 18409
>gb|AC158353.3| Mus musculus chromosome 8, clone RP24-363C18, complete sequence Length = 161841 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 543 aaagagaaaagattttattttatttc 568 |||||| ||||||||||||||||||| Sbjct: 11142 aaagaggaaagattttattttatttc 11167
>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome Length = 1176248 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1839 tgaaattaacaatactactcaa 1860 |||||||||||||||||||||| Sbjct: 1109098 tgaaattaacaatactactcaa 1109077
>gb|AC115778.11| Mus musculus chromosome 8, clone RP23-148F13, complete sequence Length = 234778 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 543 aaagagaaaagattttattttatttc 568 |||||| ||||||||||||||||||| Sbjct: 34195 aaagaggaaagattttattttatttc 34170
>gb|AC022494.25| Homo sapiens 3 BAC RP11-63E16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 24300 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 627 gattatggggatggatccctca 648 |||||||||||||||||||||| Sbjct: 8823 gattatggggatggatccctca 8844
>emb|AL591682.8| Human DNA sequence from clone RP11-356K24 on chromosome 6 Contains part of gene KIAA1733 and a CpG island, complete sequence Length = 164000 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 125 caagaagaaaacgagagggaaagaat 150 ||||||||||| |||||||||||||| Sbjct: 131967 caagaagaaaaggagagggaaagaat 131942
>gb|AC022598.10| Homo sapiens chromosome 8, clone RP11-119K7, complete sequence Length = 155323 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 627 gattatggggatggatccctca 648 |||||||||||||||||||||| Sbjct: 51608 gattatggggatggatccctca 51629
>emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4 Length = 313050 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 689 caaatgaacaacagaaaaagaa 710 |||||||||||||||||||||| Sbjct: 183155 caaatgaacaacagaaaaagaa 183134
>emb|AJ309927.1|PFA309927 Plasmodium falciparum gs gene for putative glutathione synthetase Length = 1968 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 689 caaatgaacaacagaaaaagaa 710 |||||||||||||||||||||| Sbjct: 1745 caaatgaacaacagaaaaagaa 1766
>gb|AC069471.4|AC069471 Arabidopsis thaliana chromosome 1 BAC F13K9 genomic sequence, complete sequence Length = 126991 Score = 44.1 bits (22), Expect = 1.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 964 gactagatcagttaaaagcaagcaaaatgaaagaattattcatcaagaag 1013 |||||||||| | |||||||||| ||| |||||| | |||||||||||| Sbjct: 14948 gactagatcaactgaaagcaagcagaatcaaagaacttttcatcaagaag 14997
>emb|BX547935.12| Zebrafish DNA sequence from clone CH211-207C1 in linkage group 16, complete sequence Length = 195252 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 546 gagaaaagattttattttattt 567 |||||||||||||||||||||| Sbjct: 140203 gagaaaagattttattttattt 140182
>gb|AC068121.8| Homo sapiens BAC clone RP11-181P21 from 2, complete sequence Length = 170846 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1460 gaaggaaaaggaagaagagaga 1481 |||||||||||||||||||||| Sbjct: 93692 gaaggaaaaggaagaagagaga 93713
>gb|AC078962.30| Homo sapiens 12 BAC RP11-338E21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162644 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 627 gattatggggatggatccctca 648 |||||||||||||||||||||| Sbjct: 117846 gattatggggatggatccctca 117867
>emb|BX842613.7| Zebrafish DNA sequence from clone CH211-227J9 in linkage group 19, complete sequence Length = 166128 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1150 tatacaaaacaaaagaggaggc 1171 |||||||||||||||||||||| Sbjct: 84806 tatacaaaacaaaagaggaggc 84827
>emb|AJ719155.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT2-44-390, cultivar Bright Yellow 2 Length = 311 Score = 44.1 bits (22), Expect = 1.9 Identities = 31/34 (91%) Strand = Plus / Minus Query: 964 gactagatcagttaaaagcaagcaaaatgaaaga 997 |||| |||||| ||||||||||||| |||||||| Sbjct: 48 gactggatcagctaaaagcaagcaagatgaaaga 15
>gb|BC092148.1| Xenopus laevis cDNA clone MGC:98998 IMAGE:5513759, complete cds Length = 4517 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1459 tgaaggaaaaggaagaagagag 1480 |||||||||||||||||||||| Sbjct: 3599 tgaaggaaaaggaagaagagag 3620
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 694 gaacaacagaaaaagaacatca 715 |||||||||||||||||||||| Sbjct: 97921 gaacaacagaaaaagaacatca 97942
>emb|AL732454.12| Mouse DNA sequence from clone RP23-289P8 on chromosome X, complete sequence Length = 179447 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 368 gagatgcaaatgaagaaagaag 389 |||||||||||||||||||||| Sbjct: 23746 gagatgcaaatgaagaaagaag 23725
>emb|CR848703.12| Zebrafish DNA sequence from clone DKEY-10H19 in linkage group 6, complete sequence Length = 170440 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 867 gcaaattaatatattttcatt 887 ||||||||||||||||||||| Sbjct: 95746 gcaaattaatatattttcatt 95726 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 867 gcaaattaatatattttcatt 887 ||||||||||||||||||||| Sbjct: 114856 gcaaattaatatattttcatt 114836 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 867 gcaaattaatatattttcatt 887 ||||||||||||||||||||| Sbjct: 147205 gcaaattaatatattttcatt 147185
>gb|AC188393.3| Rhesus macaque BAC clone CH250-92H12 from chromosome unknown, complete sequence Length = 154963 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 ttcaggctgaagttgagagaa 434 ||||||||||||||||||||| Sbjct: 43423 ttcaggctgaagttgagagaa 43443
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1151 atacaaaacaaaagaggaggccaca 1175 |||||||||||||| |||||||||| Sbjct: 10375807 atacaaaacaaaaggggaggccaca 10375783
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1520 tgtaaagaggaatgaaaattcattt 1544 |||||| |||||||||||||||||| Sbjct: 3183253 tgtaaataggaatgaaaattcattt 3183229
>ref|XM_640783.2| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0201689) mRNA, complete cds Length = 9678 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1750 tccatgatgaagataaaacat 1770 ||||||||||||||||||||| Sbjct: 3778 tccatgatgaagataaaacat 3758
>emb|CT030035.11| Mouse DNA sequence from clone RP24-192J9 on chromosome 13, complete sequence Length = 183134 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 agaaaagattttattttattt 567 ||||||||||||||||||||| Sbjct: 6648 agaaaagattttattttattt 6668
>gb|AC149883.2| Xenopus tropicalis clone CH216-80L11, complete sequence Length = 146021 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1057 tgccttaccagacagaaatgg 1077 ||||||||||||||||||||| Sbjct: 66408 tgccttaccagacagaaatgg 66388
>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence Length = 130146 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1007 caagaagaaagctgagattgaggaa 1031 ||||||||||| ||||||||||||| Sbjct: 112136 caagaagaaagatgagattgaggaa 112160
>emb|CR848789.11| Zebrafish DNA sequence from clone DKEYP-114B4 in linkage group 16, complete sequence Length = 195410 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1908 ttcatgtatttattattatat 1928 ||||||||||||||||||||| Sbjct: 180404 ttcatgtatttattattatat 180384
>gb|DQ366737.1| Uncultured Prochlorococcus marinus clone HOT0M-5C8 genomic sequence Length = 20051 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 aagaaacttgaggagcaccaa 523 ||||||||||||||||||||| Sbjct: 15875 aagaaacttgaggagcaccaa 15855
>ref|NM_129283.2| Arabidopsis thaliana ATRPS5B (RIBOSOMAL PROTEIN 5B); structural constituent of ribosome (ATRPS5B) mRNA, complete cds Length = 910 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1004 catcaagaagaaagctgagattgag 1028 |||||||||||||| |||||||||| Sbjct: 676 catcaagaagaaagatgagattgag 700
>ref|NM_001036425.1| Arabidopsis thaliana ATRPS5B (RIBOSOMAL PROTEIN 5B); structural constituent of ribosome (ATRPS5B) mRNA, complete cds Length = 991 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1004 catcaagaagaaagctgagattgag 1028 |||||||||||||| |||||||||| Sbjct: 737 catcaagaagaaagatgagattgag 761
>gb|AC115044.10| Mus musculus chromosome 3, clone RP24-297E7, complete sequence Length = 143527 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 agaaaagattttattttattt 567 ||||||||||||||||||||| Sbjct: 115191 agaaaagattttattttattt 115211
>gb|AC132837.11| Mus musculus chromosome 18, clone RP24-490M12, complete sequence Length = 139563 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1907 attcatgtatttattattata 1927 ||||||||||||||||||||| Sbjct: 38946 attcatgtatttattattata 38966
>gb|AC073162.9| Homo sapiens chromosome 10 clone RP11-536J24, complete sequence Length = 185754 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 701 agaaaaagaacatcagtgacg 721 ||||||||||||||||||||| Sbjct: 164640 agaaaaagaacatcagtgacg 164660
>gb|AC124602.5| Mus musculus BAC clone RP23-37L7 from chromosome 7, complete sequence Length = 189065 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1718 aagtaaggtggggaataacagaagc 1742 |||||||||||||||| |||||||| Sbjct: 71320 aagtaaggtggggaatgacagaagc 71296
>gb|AY458634.2| Uncultured bacterium 314 clone EBAC750-09G06 genomic sequence Length = 48824 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 gaaaacgagagggaaagaata 151 ||||||||||||||||||||| Sbjct: 1467 gaaaacgagagggaaagaata 1487
>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6 through 10 and partial cds Length = 688489 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 603 agttctgatttgcaatttctcaaagatta 631 |||||||||||| | |||||||||||||| Sbjct: 484333 agttctgatttgaattttctcaaagatta 484361
>gb|AC124412.3| Mus musculus BAC clone RP24-274J3 from chromosome 9, complete sequence Length = 175945 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 542 aaaagagaaaagattttattt 562 ||||||||||||||||||||| Sbjct: 141607 aaaagagaaaagattttattt 141587
>gb|AC121581.3| Mus musculus BAC clone RP23-256O22 from chromosome 3, complete sequence Length = 159314 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 agaaaagattttattttattt 567 ||||||||||||||||||||| Sbjct: 15060 agaaaagattttattttattt 15080
>gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome 13, complete sequence Length = 205173 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 agaaaagattttattttattt 567 ||||||||||||||||||||| Sbjct: 162194 agaaaagattttattttattt 162214
>gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosome 3, complete sequence Length = 190309 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1461 aaggaaaaggaagaagagaga 1481 ||||||||||||||||||||| Sbjct: 7993 aaggaaaaggaagaagagaga 7973
>ref|NM_206677.1| Drosophila melanogaster Protein phosphatase 4 regulatory subunit 2-related protein CG2890-RC, transcript variant C (PPP4R2r), mRNA Length = 2415 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1151 atacaaaacaaaagaggaggccaca 1175 |||||||||||||| |||||||||| Sbjct: 2245 atacaaaacaaaaggggaggccaca 2221
>ref|NM_167232.1| Drosophila melanogaster Protein phosphatase 4 regulatory subunit 2-related protein CG2890-RA, transcript variant A (PPP4R2r), mRNA Length = 2432 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1151 atacaaaacaaaagaggaggccaca 1175 |||||||||||||| |||||||||| Sbjct: 2262 atacaaaacaaaaggggaggccaca 2238
>ref|NM_080344.2| Drosophila melanogaster Protein phosphatase 4 regulatory subunit 2-related protein CG2890-RB, transcript variant B (PPP4R2r), mRNA Length = 2401 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1151 atacaaaacaaaagaggaggccaca 1175 |||||||||||||| |||||||||| Sbjct: 2231 atacaaaacaaaaggggaggccaca 2207
>gb|AC006834.3| Caenorhabditis elegans cosmid ZK973, complete sequence Length = 66626 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 938 tcagcagattgaatctgaagttcag 962 |||||||||| |||||||||||||| Sbjct: 45427 tcagcagattaaatctgaagttcag 45451
>gb|AY303171.1| Solanum bulbocastanum chromosome 8 clone UW177O13, complete sequence Length = 163635 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1901 tacaacattcatgtatttatt 1921 ||||||||||||||||||||| Sbjct: 158937 tacaacattcatgtatttatt 158957
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 ctgcaaagacttaaaagagaa 550 ||||||||||||||||||||| Sbjct: 3976630 ctgcaaagacttaaaagagaa 3976650
>gb|AC154570.2| Mus musculus BAC clone RP23-385M5 from chromosome 14, complete sequence Length = 209218 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 603 agttctgatttgcaatttctcaaagatta 631 |||||||||||| | |||||||||||||| Sbjct: 25331 agttctgatttgaattttctcaaagatta 25303
>gb|AC099506.3| Homo sapiens chromosome 16 clone RP11-22H5, complete sequence Length = 186318 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1911 atgtatttattattatatcac 1931 ||||||||||||||||||||| Sbjct: 44884 atgtatttattattatatcac 44904
>gb|AC107871.10| Homo sapiens chromosome 15, clone RP11-315D16, complete sequence Length = 171605 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 ccatcacaccagccctgcaag 368 ||||||||||||||||||||| Sbjct: 163435 ccatcacaccagccctgcaag 163455
>gb|AC023683.4| Drosophila melanogaster X BAC RP98-29G2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160194 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1151 atacaaaacaaaagaggaggccaca 1175 |||||||||||||| |||||||||| Sbjct: 9870 atacaaaacaaaaggggaggccaca 9894
>emb|CT025560.9| Mouse DNA sequence from clone RP23-432N22 on chromosome 16, complete sequence Length = 212903 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1531 atgaaaattcatttttatcaa 1551 ||||||||||||||||||||| Sbjct: 127542 atgaaaattcatttttatcaa 127562
>ref|NM_058955.1| Caenorhabditis elegans ZK973.8 (ZK973.8) mRNA, complete cds Length = 1179 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 938 tcagcagattgaatctgaagttcag 962 |||||||||| |||||||||||||| Sbjct: 574 tcagcagattaaatctgaagttcag 550
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1151 atacaaaacaaaagaggaggccaca 1175 |||||||||||||| |||||||||| Sbjct: 149726 atacaaaacaaaaggggaggccaca 149750
>gb|AC021553.14| Homo sapiens chromosome 15, clone RP11-709B3, complete sequence Length = 185596 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 ccatcacaccagccctgcaag 368 ||||||||||||||||||||| Sbjct: 32651 ccatcacaccagccctgcaag 32671
>emb|BX927392.9| Zebrafish DNA sequence from clone DKEY-17E11 in linkage group 11, complete sequence Length = 158543 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1322 aattatagcaaacaaaattcc 1342 ||||||||||||||||||||| Sbjct: 19108 aattatagcaaacaaaattcc 19088
>dbj|AK038380.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130099P21 product:unclassifiable, full insert sequence Length = 941 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1461 aaggaaaaggaagaagagaga 1481 ||||||||||||||||||||| Sbjct: 277 aaggaaaaggaagaagagaga 297
>gb|AC005896.3| Arabidopsis thaliana chromosome 2 clone F3G5 map ve018, complete sequence Length = 119001 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1004 catcaagaagaaagctgagattgag 1028 |||||||||||||| |||||||||| Sbjct: 17145 catcaagaagaaagatgagattgag 17121
>gb|AY081669.1| Arabidopsis thaliana 40S ribosomal protein S5 (At2g37270) mRNA, complete cds Length = 691 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1004 catcaagaagaaagctgagattgag 1028 |||||||||||||| |||||||||| Sbjct: 576 catcaagaagaaagatgagattgag 600
>gb|AC026884.7| Homo sapiens chromosome 10 clone RP11-123G9, complete sequence Length = 142093 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 983 aagcaaaatgaaagaattatt 1003 ||||||||||||||||||||| Sbjct: 75614 aagcaaaatgaaagaattatt 75634
>gb|AC095035.2| Homo sapiens chromosome 1 clone RP11-159J16, complete sequence Length = 173084 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1459 tgaaggaaaaggaagaagaga 1479 ||||||||||||||||||||| Sbjct: 79121 tgaaggaaaaggaagaagaga 79101
>gb|AC079946.11| Homo sapiens 3q BAC RP11-482E8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 200788 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 agaaaagattttattttattt 567 ||||||||||||||||||||| Sbjct: 157959 agaaaagattttattttattt 157979
>emb|BX293997.14| Zebrafish DNA sequence from clone DKEY-15L7 in linkage group 6, complete sequence Length = 233655 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 867 gcaaattaatatattttcatt 887 ||||||||||||||||||||| Sbjct: 74377 gcaaattaatatattttcatt 74397 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 867 gcaaattaatatattttcatt 887 ||||||||||||||||||||| Sbjct: 86820 gcaaattaatatattttcatt 86840 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 867 gcaaattaatatattttcatt 887 ||||||||||||||||||||| Sbjct: 103063 gcaaattaatatattttcatt 103083
>gb|AC149155.3| Xenopus tropicalis clone ISB-242B17, complete sequence Length = 94528 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 ttcaagaactaaagatgatat 110 ||||||||||||||||||||| Sbjct: 40354 ttcaagaactaaagatgatat 40374
>gb|AC093926.6| Genomic sequence for Mus musculus, clone RP23-342N3, complete sequence Length = 210913 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 542 aaaagagaaaagattttattt 562 ||||||||||||||||||||| Sbjct: 32310 aaaagagaaaagattttattt 32290
>gb|AC008929.3| Homo sapiens chromosome 5, complete sequence Length = 125403 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 catcacaccagccctgcaaga 369 ||||||||||||||||||||| Sbjct: 108163 catcacaccagccctgcaaga 108143
>emb|AL391476.20| Human DNA sequence from clone RP11-229A19 on chromosome 1 Contains the 3' end of the TTF2 gene for RNA polymerase II transcription termination factor, the TRIM45 gene for tripartite motif-containing 45, a ribosomal protein S15a (RPS15A) pseudogene, the gene for immune costimulatory protein B7-H4 and a CpG island, complete sequence Length = 171595 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 698 aacagaaaaagaacatcagtg 718 ||||||||||||||||||||| Sbjct: 91981 aacagaaaaagaacatcagtg 91961
>emb|AL358053.31| Human DNA sequence from clone RP11-415J4 on chromosome 9, complete sequence Length = 50156 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 aagaaagaagccagactaaaa 400 ||||||||||||||||||||| Sbjct: 21129 aagaaagaagccagactaaaa 21149
>emb|AL354877.25| Human DNA sequence from clone RP11-430K21 on chromosome 9 Contains the 5' end of a novel gene and a pseudogene similar to part of HLA-B associated transcript 2 (BAT2), complete sequence Length = 116236 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1460 gaaggaaaaggaagaagagag 1480 ||||||||||||||||||||| Sbjct: 62477 gaaggaaaaggaagaagagag 62457
>emb|AL138752.5| Human DNA sequence from clone RP11-3J10 on chromosome 9p12-13.3 Contains the 3' end of the SHB gene for SHB (Src homology 2 domain containing) adaptor protein B, the MCART1 gene for mitochondrial carrier triple repeat 1 (MGC14836), a novel gene, a novel pseudogene, a phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase (PAICS) pseudogene, a novel gene (MGC10765,FLJ23201), a mitochondrial ribosomal protein S10 (MRP-S10, FLJ10567, PNAS-122) (MRPS10) psueodgene, the gene for exosome component RRP40, a novel gene (FLJ31455) and four CpG islands, complete sequence Length = 189271 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 983 aagcaaaatgaaagaattatt 1003 ||||||||||||||||||||| Sbjct: 174578 aagcaaaatgaaagaattatt 174598
>emb|AL136321.5| Human DNA sequence from clone RP11-31E23 on chromosome 1q31.3-32.1 Contains a novel gene, complete sequence Length = 170632 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1536 aattcatttttatcaaggcccaacacagg 1564 ||||||||||||| ||||||||| ||||| Sbjct: 9537 aattcatttttataaaggcccaaaacagg 9565
>gb|AY059849.1| Arabidopsis thaliana 40S ribosomal protein S5 (At2g37270; F3G5.6) mRNA, complete cds Length = 856 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1004 catcaagaagaaagctgagattgag 1028 |||||||||||||| |||||||||| Sbjct: 673 catcaagaagaaagatgagattgag 697
>emb|CR933736.12| Mouse DNA sequence from clone DN-183N8 on chromosome 11, complete sequence Length = 194230 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 549 aaaagattttattttatttca 569 ||||||||||||||||||||| Sbjct: 24806 aaaagattttattttatttca 24786
>gb|AY051757.1| Drosophila melanogaster LD28993 full length cDNA Length = 2440 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1151 atacaaaacaaaagaggaggccaca 1175 |||||||||||||| |||||||||| Sbjct: 2253 atacaaaacaaaaggggaggccaca 2229
>gb|AC067837.6| Homo sapiens chromosome 15, clone RP11-65B16, complete sequence Length = 173919 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 348 ccatcacaccagccctgcaag 368 ||||||||||||||||||||| Sbjct: 61867 ccatcacaccagccctgcaag 61847
>gb|AY088613.1| Arabidopsis thaliana clone 8397 mRNA, complete sequence Length = 839 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1004 catcaagaagaaagctgagattgag 1028 |||||||||||||| |||||||||| Sbjct: 676 catcaagaagaaagatgagattgag 700
>emb|AL596096.7| Mouse DNA sequence from clone RP23-42P20 on chromosome 11 Contains the 5' end of the Alox12e gene for epidermal arachidonate lipoxygenase, the gene for arachidonate 15-lipoxygenase, a novel pseudogene, two genes for novel proteins (4930563C04Rik, 1110030J09Rik), a Mitochondrial 28S ribosomal protein pseudogene, a NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 (Ndufb8) pseudogene, the gene for a novel protein similar to Beta-arrestin 2 (Arrestin, beta 2) (LOC216869), the Cxcl16 gene for chemokine (C-X-C motif) ligand 16, the gene for a novel protein similar to human zinc finger MYND domain containg 15 (ZMYND15), the 5' end of the gene for a novel protein (2010003F10Rik) and three CpG islands, complete sequence Length = 193277 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 549 aaaagattttattttatttca 569 ||||||||||||||||||||| Sbjct: 185468 aaaagattttattttatttca 185448
>gb|AC152946.1| Mus musculus 10 BAC RP23-40N7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224018 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 549 aaaagattttattttatttca 569 ||||||||||||||||||||| Sbjct: 47446 aaaagattttattttatttca 47426
>emb|CR931728.1| Medicago truncatula chromosome 5 clone mth2-175g3, COMPLETE SEQUENCE Length = 115300 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1145 atatatatacaaaacaaaaga 1165 ||||||||||||||||||||| Sbjct: 33534 atatatatacaaaacaaaaga 33514
>gb|AC137741.5| Homo sapiens chromosome 8, clone CTD-2059D3, complete sequence Length = 117100 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1757 tgaagataaaacatcagggatctcc 1781 ||||||||||| ||||||||||||| Sbjct: 56845 tgaagataaaatatcagggatctcc 56869
>gb|AC008226.10|AC008226 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone BACR02B19, complete sequence Length = 171286 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1520 tgtaaagaggaatgaaaattcattt 1544 |||||| |||||||||||||||||| Sbjct: 73487 tgtaaataggaatgaaaattcattt 73463
>gb|AC021665.7|AC021665 Arabidopsis thaliana chromosome 1 BAC F17M19 genomic sequence, complete sequence Length = 80413 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 tttgtcgctcaagaaacttga 513 ||||||||||||||||||||| Sbjct: 68760 tttgtcgctcaagaaacttga 68740
>emb|BX890576.12| Zebrafish DNA sequence from clone DKEY-203O14 in linkage group 18, complete sequence Length = 172599 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1137 atggatggatatatatacaaaacaaaaga 1165 |||||||||| ||||||||||||||||| Sbjct: 17103 atggatggatggatatacaaaacaaaaga 17131
>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 ttaaaagagaaaagattttat 560 ||||||||||||||||||||| Sbjct: 6156 ttaaaagagaaaagattttat 6176
>gb|AC116365.2| Homo sapiens chromosome 5 clone RP11-797O11, complete sequence Length = 117723 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 catcacaccagccctgcaaga 369 ||||||||||||||||||||| Sbjct: 105634 catcacaccagccctgcaaga 105654
>gb|AC079337.5| Homo sapiens BAC clone CTD-2171G21 from 2, complete sequence Length = 161804 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 aagaaagaagccagactaaaa 400 ||||||||||||||||||||| Sbjct: 78922 aagaaagaagccagactaaaa 78942
>emb|BX072568.5| Zebrafish DNA sequence from clone DKEY-238I7 in linkage group 6, complete sequence Length = 148322 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 867 gcaaattaatatattttcatt 887 ||||||||||||||||||||| Sbjct: 70097 gcaaattaatatattttcatt 70077
>gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete sequence Length = 214016 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1461 aaggaaaaggaagaagagaga 1481 ||||||||||||||||||||| Sbjct: 90589 aaggaaaaggaagaagagaga 90609
>dbj|AP006543.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1250F11, complete sequence Length = 98657 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1757 tgaagataaaacatcagggatctcc 1781 ||||||||||| ||||||||||||| Sbjct: 15636 tgaagataaaatatcagggatctcc 15612
>dbj|AP006183.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1169H7, complete sequence Length = 158699 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1757 tgaagataaaacatcagggatctcc 1781 ||||||||||| ||||||||||||| Sbjct: 139481 tgaagataaaatatcagggatctcc 139457
>gb|AC149222.4| Mus musculus BAC clone RP23-325D10 from 7, complete sequence Length = 220651 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1718 aagtaaggtggggaataacagaagc 1742 |||||||||||||||| |||||||| Sbjct: 128284 aagtaaggtggggaatgacagaagc 128308
>gb|AC154414.2| Mus musculus BAC clone RP24-231D24 from 16, complete sequence Length = 157232 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1531 atgaaaattcatttttatcaa 1551 ||||||||||||||||||||| Sbjct: 82428 atgaaaattcatttttatcaa 82408
>gb|AC115017.11| Mus musculus chromosome 3, clone RP24-220A11, complete sequence Length = 167811 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 agaaaagattttattttattt 567 ||||||||||||||||||||| Sbjct: 123189 agaaaagattttattttattt 123209
>emb|AL670231.7| Mouse DNA sequence from clone RP23-329G7 on chromosome 4, complete sequence Length = 229957 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 aaagagaaaagattttatttt 563 ||||||||||||||||||||| Sbjct: 97863 aaagagaaaagattttatttt 97843
>emb|AL833771.4| Mouse DNA sequence from clone RP23-228H14 on chromosome 2, complete sequence Length = 189283 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1461 aaggaaaaggaagaagagaga 1481 ||||||||||||||||||||| Sbjct: 13023 aaggaaaaggaagaagagaga 13003
>gb|L08427.1|MZEABP5X Zea mays auxin-binding protein (abp5) gene, exons 1-4 and 5' end of cds Length = 2718 Score = 42.1 bits (21), Expect = 7.6 Identities = 66/81 (81%) Strand = Plus / Plus Query: 344 aattccatcacaccagccctgcaagagatgcaaatgaagaaagaagccagactaaaacag 403 ||||||||||| || ||||| ||||| ||||| |||| || || |||||| |||| ||| Sbjct: 1 aattccatcacgcccgccctacaagaaatgcagatgagaaaggacgccagagtaaagcag 60 Query: 404 ttcacagaggttcaggctgaa 424 ||| ||||||||| ||||| Sbjct: 61 ttcgtggaggttcagactgaa 81
>gb|AC169127.3| Mus musculus BAC clone RP24-493G21 from chromosome 9, complete sequence Length = 156163 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1460 gaaggaaaaggaagaagagag 1480 ||||||||||||||||||||| Sbjct: 58031 gaaggaaaaggaagaagagag 58051 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 468,177,909 Number of extensions: 29062020 Number of successful extensions: 824029 Number of sequences better than 10.0: 113 Number of HSP's gapped: 824013 Number of HSP's successfully gapped: 145 Length of query: 1978 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1955 Effective length of database: 18,503,978,556 Effective search space: 36175278076980 Effective search space used: 36175278076980 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
