ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf41j18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AY598357: 126 1e-29
2AK111678: 126 1e-29
3Os09g0539500:Os09g0539500 103 2e-22
4Os02g0101600:Os02g0101600 96 2e-20
5AY600992:Os08g0375700 91 6e-19
6AY336992:Os08g0375700 91 6e-19
7Os09g0274800:Os09g0274800 77 9e-15
8AK107960:Os09g0273800 76 2e-14
9Os09g0274700:Os09g0274700 75 4e-14
10Os07g0144900:Os07g0144900 65 4e-11
11AK064628:Os07g0625500 65 5e-11
12AY600991:Os06g0113800 65 6e-11
13Os07g0625600:Os07g0625600 64 1e-10
14AK111610:Os09g0272900 58 8e-09
15Os10g0438100:Os10g0438100 55 4e-08
16Os07g0624900:Os07g0624900 46 2e-05
17AK070953:Os09g0275200 45 4e-05
18AK073278:Os07g0625400 44 1e-04
19Os08g0375200:Os08g0375200 42 3e-04
20AK102131:Os07g0409500 40 0.002
21AK121616:Os01g0327000 33 0.20
22Os07g0588300:Os07g0588300 32 0.45
23AK105733:Os05g0475700 29 3.8
24AK109628:Os04g0389800 28 6.4
25AK109008:Os11g0702900 28 6.4
26AK105356:Os05g0298900 28 8.4

>AY598357: |
          Length = 173
 Score =  126 bits (317), Expect = 1e-29
 Identities = 68/114 (59%), Positives = 73/114 (64%), Gaps = 7/114 (6%)
 Frame = +2

Query: 158 GEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADNGIPLPNVNSKILSKVIEYCN 337
           GEK+M+TLKSSDG            SQTIRH+IEDDCADNGIPLPNVNSKILSKVIEYCN
Sbjct: 5   GEKKMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCN 64

Query: 338 KHV-------QXXXXXXXXXXXXXXXXXXXXLKNWDAEFVKVDQATLFDLILTS 478
           KHV                            LKNWDA+FVKVDQATLFDLIL +
Sbjct: 65  KHVHAAAAAASKAADDAASAAAAVPPPSGEDLKNWDADFVKVDQATLFDLILAA 118



to top

>AK111678: |
          Length = 173

 Score =  126 bits (317), Expect = 1e-29
 Identities = 68/114 (59%), Positives = 73/114 (64%), Gaps = 7/114 (6%)
 Frame = +2

Query: 158 GEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADNGIPLPNVNSKILSKVIEYCN 337
           GEK+M+TLKSSDG            SQTIRH+IEDDCADNGIPLPNVNSKILSKVIEYCN
Sbjct: 5   GEKKMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCN 64

Query: 338 KHV-------QXXXXXXXXXXXXXXXXXXXXLKNWDAEFVKVDQATLFDLILTS 478
           KHV                            LKNWDA+FVKVDQATLFDLIL +
Sbjct: 65  KHVHAAAAAASKAADDAASAAAAVPPPSGEDLKNWDADFVKVDQATLFDLILAA 118



to top

>Os09g0539500:Os09g0539500 |
          Length = 205

 Score =  103 bits (256), Expect = 2e-22
 Identities = 58/117 (49%), Positives = 69/117 (58%), Gaps = 8/117 (6%)
 Frame = +2

Query: 146 AGDAGEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADNGIPLPNVNSKILSKVI 325
           A +A  K M+TL+S +G            SQTIRH+IED CAD GIPLPNV++KILSKVI
Sbjct: 2   AAEAETKAMITLRSCEGQVFEVAEAVAMESQTIRHMIEDKCADTGIPLPNVSAKILSKVI 61

Query: 326 EYCNKHVQ--------XXXXXXXXXXXXXXXXXXXXLKNWDAEFVKVDQATLFDLIL 472
           EYC+KHV+                            LK +DAEFVKVDQ+TLFDLIL
Sbjct: 62  EYCSKHVEARGGAAAAADGDAPAPAAVEANKAVEDELKTFDAEFVKVDQSTLFDLIL 118



to top

>Os02g0101600:Os02g0101600 |
          Length = 101

 Score = 96.3 bits (238), Expect = 2e-20
 Identities = 51/70 (72%), Positives = 55/70 (78%)
 Frame = +2

Query: 137 MAAAGDAGEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADNGIPLPNVNSKILS 316
           MAAA + GEK+M+TLKSSDG            SQTIRH+IED CADNGIPLPNVNSKILS
Sbjct: 1   MAAAAE-GEKKMITLKSSDGEEFEVEAVGME-SQTIRHMIEDKCADNGIPLPNVNSKILS 58

Query: 317 KVIEYCNKHV 346
           KVIEYCNKHV
Sbjct: 59  KVIEYCNKHV 68



to top

>AY600992:Os08g0375700 |
          Length = 169

 Score = 91.3 bits (225), Expect = 6e-19
 Identities = 49/114 (42%), Positives = 64/114 (56%)
 Frame = +2

Query: 137 MAAAGDAGEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADNGIPLPNVNSKILS 316
           MAA  D GEK M+ L SSDG            S+T+ H+IEDDC DNG+PLPNV + +L+
Sbjct: 1   MAATADNGEK-MILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLA 59

Query: 317 KVIEYCNKHVQXXXXXXXXXXXXXXXXXXXXLKNWDAEFVKVDQATLFDLILTS 478
           KV+EY  KH                      LK++DAEFV VD+  +F+LIL +
Sbjct: 60  KVVEYFKKHAAVTPKPATEAVAADKAKREEELKSFDAEFVDVDRTMVFELILAA 113



to top

>AY336992:Os08g0375700 |
          Length = 169

 Score = 91.3 bits (225), Expect = 6e-19
 Identities = 49/114 (42%), Positives = 64/114 (56%)
 Frame = +2

Query: 137 MAAAGDAGEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADNGIPLPNVNSKILS 316
           MAA  D GEK M+ L SSDG            S+T+ H+IEDDC DNG+PLPNV + +L+
Sbjct: 1   MAATADNGEK-MILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLA 59

Query: 317 KVIEYCNKHVQXXXXXXXXXXXXXXXXXXXXLKNWDAEFVKVDQATLFDLILTS 478
           KV+EY  KH                      LK++DAEFV VD+  +F+LIL +
Sbjct: 60  KVVEYFKKHAAVTPKPATEAVAADKAKREEELKSFDAEFVDVDRTMVFELILAA 113



to top

>Os09g0274800:Os09g0274800 |
          Length = 172

 Score = 77.4 bits (189), Expect = 9e-15
 Identities = 49/113 (43%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = +2

Query: 134 AMAAAGDAGEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADNG-IPLPNVNSKI 310
           A AA G A  ++M+ L SSDG            S+T+ ++IEDDCA NG IPL NV S I
Sbjct: 5   AAAADGAADGEKMILLISSDGAKFELSEAAASLSKTLGNMIEDDCATNGAIPLANVASDI 64

Query: 311 LSKVIEYCNKHVQXXXXXXXXXXXXXXXXXXXXLKNWDAEFVKVDQATLFDLI 469
           L+KV+EYCNKH                      L  +DAEFV VD+  LF LI
Sbjct: 65  LAKVVEYCNKHA----AATATATAAAKASGEEELSKFDAEFVSVDRKKLFGLI 113



to top

>AK107960:Os09g0273800 |
          Length = 167

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
 Frame = +2

Query: 137 MAAAGD---AGEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADNGIPLPNVNSK 307
           MAAA D   AG+ +++ + SSDG            S+ + ++IEDDC +NG+PLPNV S 
Sbjct: 1   MAAANDGADAGDSKILLI-SSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASN 59

Query: 308 ILSKVIEYCNKHVQXXXXXXXXXXXXXXXXXXXXLKNWDAEFVKVDQATLFDLILTS 478
           +L+KV++YC KH                      LK++DA F+ VD   LF LIL +
Sbjct: 60  VLAKVLDYCKKHA-----AAAAAAAEDVAVKDQELKSFDASFIDVDNTMLFGLILAA 111



to top

>Os09g0274700:Os09g0274700 |
          Length = 165

 Score = 75.5 bits (184), Expect = 4e-14
 Identities = 41/115 (35%), Positives = 61/115 (53%)
 Frame = +2

Query: 134 AMAAAGDAGEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADNGIPLPNVNSKIL 313
           A+    DAG+ +++ + SSDG            S+ + ++IED C +NG+PLPNV S +L
Sbjct: 3   AVKEGADAGDSKILLI-SSDGQHFQVTEAEASMSKLVSNMIEDGCTENGVPLPNVASNVL 61

Query: 314 SKVIEYCNKHVQXXXXXXXXXXXXXXXXXXXXLKNWDAEFVKVDQATLFDLILTS 478
           +KV+EYC KH                      LK++DA F+ VD   LF+LIL +
Sbjct: 62  AKVLEYCKKHA-------AAAAAEDVAVKDQELKSFDASFIDVDNTMLFNLILAA 109



to top

>Os07g0144900:Os07g0144900 |
          Length = 172

 Score = 65.5 bits (158), Expect = 4e-11
 Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
 Frame = +2

Query: 134 AMAAAGDAGEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADNGIPLPNVNSKIL 313
           A A A   G  +M+ L S+DG            SQ I ++IEDDC +NG+ LPNV+  IL
Sbjct: 4   AAAEATTDGGGKMIILISADGKRFEVTEAVASQSQLISNMIEDDCTENGVRLPNVDGDIL 63

Query: 314 SKVIEYCNKHVQXXXXXXXXXXXXXXXXXXXXLKNWDAEFVK-VDQATLFDLILTS 478
           + V++YCN H                      LK +DAE V+ ++   LF LIL +
Sbjct: 64  TMVVDYCNMHA---GDAAAAGDTMKASSTEEELKKFDAELVQALENPVLFKLILAA 116



to top

>AK064628:Os07g0625500 |
          Length = 174

 Score = 65.1 bits (157), Expect = 5e-11
 Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
 Frame = +2

Query: 134 AMAAAGDAGEK----RMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDD-CADNGIPLPNV 298
           A AAA DA EK    RM+TL S++G            S TIR +++D  C D G PLPNV
Sbjct: 8   AAAAAADAEEKESGSRMITLTSNEGKAFVVTEASARQSATIRSMVDDGGCVDKGFPLPNV 67

Query: 299 NSKILSKVIEYCNKH 343
           +SK L++VI+YC++H
Sbjct: 68  DSKTLARVIQYCDEH 82



to top

>AY600991:Os06g0113800 |
          Length = 166

 Score = 64.7 bits (156), Expect = 6e-11
 Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
 Frame = +2

Query: 137 MAAAGDAGEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADN---GIPLPNVNSK 307
           MAAA +   K+M+ + SSDG            S+ + H+IED C  +   GI LPNV   
Sbjct: 1   MAAAAEEKNKKMIKVISSDGEAFEMTEAAASMSRILLHMIEDGCTGDGGAGITLPNVAGS 60

Query: 308 ILSKVIEYCNKHVQXXXXXXXXXXXXXXXXXXXXLKNWDAEFVKVDQATLFDLILTS 478
            L+KVIEYC KH                      LK +D EF++V    L+DLI+ +
Sbjct: 61  ALAKVIEYCTKHA-----IAAAEGSSSSRKAKEELKKFDVEFMEVGIDMLYDLIMAA 112



to top

>Os07g0625600:Os07g0625600 |
          Length = 178

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
 Frame = +2

Query: 131 QAMAAAGDAGEK-----RMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADNGIPLPN 295
           +A+AA  +  E+     RM+TLKS++G            S TI H+I+DDC    +PLPN
Sbjct: 10  EAVAADAEKAEEKESGSRMITLKSNEGKAFVVTEVSARQSTTIGHMIDDDCTREAVPLPN 69

Query: 296 VNSKILSKVIEYCNKH 343
           V+SK L KVIEY ++H
Sbjct: 70  VDSKTLEKVIEYFDEH 85



to top

>AK111610:Os09g0272900 |
          Length = 198

 Score = 57.8 bits (138), Expect = 8e-09
 Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
 Frame = +2

Query: 140 AAAGDAGEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDC--ADNGIPLPNVNSKIL 313
           AAAG+     MVTL SSDG            SQT+   ++ D   A NGIPLPNV   +L
Sbjct: 33  AAAGE-----MVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVL 87

Query: 314 SKVIEYCNKHVQ-XXXXXXXXXXXXXXXXXXXXLKNWDAEFVKVDQATLFDLI 469
           +KV+EYC KH                       +K++D EF+ VD   L+ L+
Sbjct: 88  AKVVEYCTKHASAAAAAINADTAKTSKEEEELMMKSFDDEFILVDNHMLYSLL 140



to top

>Os10g0438100:Os10g0438100 |
          Length = 220

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 22/135 (16%)
 Frame = +2

Query: 140 AAAGDAGEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADNGIPLPNVNSKILSK 319
           AAA + GEK  + L S DG            S+T+R +IED+CA   IP+  V+S +L+ 
Sbjct: 32  AAAEEEGEK--LVLVSDDGVEVLASVAAARVSKTLRGMIEDECATGAIPIAGVHSDVLAL 89

Query: 320 VIEYCNKH----------------------VQXXXXXXXXXXXXXXXXXXXXLKNWDAEF 433
           ++EYC +H                      +                     LK +D +F
Sbjct: 90  LVEYCERHAPHYDPEASDRDRYPFPPFPVELPPTASSIKPVTFVDPDADPHGLKAFDKKF 149

Query: 434 VKVDQATLFDLILTS 478
           + VD +TLF++I+ +
Sbjct: 150 LDVDNSTLFEIIMAA 164



to top

>Os07g0624900:Os07g0624900 |
          Length = 200

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
 Frame = +2

Query: 158 GEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLI----EDDCADNGIPLPNVNSKILSKVI 325
           G +R + LKS DG            S+TI  +I        AD  IP P+++   L  V+
Sbjct: 46  GGRRTIHLKSKDGKQHDVTEASARLSKTIAGMILAGGGGGGADQCIPTPDIDHDTLRVVM 105

Query: 326 EYCNKHVQXXXXXXXXXXXXXXXXXXXXLKNWDAEFV-KVDQATLFDLI 469
           +YC+KH                      LK WD +FV ++DQ  LFD+I
Sbjct: 106 QYCDKHA-------------ADDADEEDLKEWDEDFVDELDQDALFDVI 141



to top

>AK070953:Os09g0275200 |
          Length = 160

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
 Frame = +2

Query: 140 AAAGDAGE--KRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIEDDCADNGIPLPNVNSKIL 313
           AA G  GE  K+ + L S DG             +T+R +I+       IPLPNV S IL
Sbjct: 3   AADGTTGEEVKKTIDLVSKDGERFEVARDAALLCKTLRWMIKGGYGR--IPLPNVASPIL 60

Query: 314 SKVIEYCNKHVQXXXXXXXXXXXXXXXXXXXXLKNWDAEFVK-VDQATLFDLILTS 478
           ++V++Y  +H                      L  +D +F+  VDQ TLFDL+L +
Sbjct: 61  ARVVDYLARHA-----------AAAAAMDDDGLDRFDRDFLAGVDQDTLFDLLLAA 105



to top

>AK073278:Os07g0625400 |
          Length = 182

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
 Frame = +2

Query: 233 SQTIRHLIEDDCADNGIPLPNVNSKILSKVIEYCNKHVQXXXXXXXXXXXXXXXXXXXXL 412
           S+ +  +I++ CAD+GIPLP V+ K + K+ EY NKH                      L
Sbjct: 53  SKLVGDMIDNVCADHGIPLPKVDIKTVRKMAEYMNKH--------------FAITNKEEL 98

Query: 413 KNWDAEFVK-----VDQATLFDLILTS 478
           K WD  F+       D+ +LF +I  S
Sbjct: 99  KIWDEGFINELDGDEDKYSLFKIIRAS 125



to top

>Os08g0375200:Os08g0375200 |
          Length = 132

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = +2

Query: 260 DDCADNGIPLPNVNSKILSKVIEYCNKHV---QXXXXXXXXXXXXXXXXXXXXLKNWDAE 430
           D  +D  + LPNV + +L+KV+EY NKH                         LK++DA+
Sbjct: 17  DSDSDPAVLLPNVTAIVLAKVVEYFNKHAAVNPKASATDSSTKTSAPKASKEELKSFDAK 76

Query: 431 FVKVDQATLFDLILTS 478
           FV VD+  L  LIL +
Sbjct: 77  FVNVDKTMLVGLILAA 92



to top

>AK102131:Os07g0409500 |
          Length = 190

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 34/124 (27%), Positives = 49/124 (39%), Gaps = 14/124 (11%)
 Frame = +2

Query: 149 GDAGEKRMVTLKSSDGXXXXXXXXXXXXSQTIRHLIED-DCADNG--IPLPN-VNSKILS 316
           G+    + ++ + SDG            S  IR + +     D+G  I LP+ ++S I  
Sbjct: 9   GEKAGGKTISFRCSDGQAFHMPVAAAMLSTAIRKMFDKYPSIDHGGVIELPHQISSGIFP 68

Query: 317 KVIEYCNKH----------VQXXXXXXXXXXXXXXXXXXXXLKNWDAEFVKVDQATLFDL 466
           KV EYC KH          V                     LKNWD EFV ++   L DL
Sbjct: 69  KVKEYCTKHAKVDDKGNPTVSTNTGAAAAASSSSTDDEEEDLKNWDKEFVNMEVKPLHDL 128

Query: 467 ILTS 478
           +L +
Sbjct: 129 LLVA 132



to top

>AK121616:Os01g0327000 |
          Length = 357

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 25/71 (35%), Positives = 33/71 (46%)
 Frame = +1

Query: 256 RGRLRRQRHPAPQRQLQDPLQGHRVLQQARPGQAXXXXXSWCVRCAAPRR*PQELGRRVR 435
           R R  RQR P  +R L  PL+  R  +  RPG+      +   R  A R+  Q++  R  
Sbjct: 80  RVRRPRQRQPHRRRLLPGPLRPPRRQRLRRPGRHRQPPPAHLHRRPARRQLRQQVAHRRG 139

Query: 436 QGRPSHPLRPH 468
            GRP    RPH
Sbjct: 140 DGRPLR--RPH 148



to top

>Os07g0588300:Os07g0588300 |
          Length = 648

 Score = 32.0 bits (71), Expect = 0.45
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -2

Query: 663 SVTQLDQTVKRNDKTESEVILLHSCRKDDDFTHGYK 556
           SVT +D T   +D  ES+V  L S R++ DFT G K
Sbjct: 227 SVTSIDGTSTDDDDEESDVSSLSSARRNWDFTGGVK 262



to top

>AK105733:Os05g0475700 |
          Length = 432

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
 Frame = +1

Query: 235 ADHPPPDRGRLRRQ-----RHPAPQRQLQDPLQGHRVLQQ 339
           A  PPPDR  + R      RH + +R+ Q  LQ HR L Q
Sbjct: 204 AHQPPPDRPGVPRHVRDYPRHRSLRRRRQHRLQVHRALDQ 243



to top

>AK109628:Os04g0389800 |
          Length = 639

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 32/94 (34%), Positives = 35/94 (37%), Gaps = 23/94 (24%)
 Frame = +1

Query: 241 HPPPDRGR----LRRQR----------------HPAPQRQLQDPLQGHRVLQQARPGQAX 360
           HPP  R R    LRR+R                HP       D   GHR L Q RP  A 
Sbjct: 263 HPPRRRRREARPLRRRRVLRVGLRAAALRGADGHPG-----DDHPHGHRELPQRRPALAA 317

Query: 361 XXXXSW-CVR--CAAPRR*PQELGRRVRQGRPSH 453
               +W CVR      RR P    R +R  RP H
Sbjct: 318 DARDAWHCVRQLRRRQRRPPPRARRALR--RPRH 349



to top

>AK109008:Os11g0702900 |
          Length = 225

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 17/58 (29%)
 Frame = +1

Query: 235 ADHPPPDRGRLRRQRHPAPQRQLQDPL----------------QGHRVLQQ-ARPGQA 357
           A  P P  G +R + H AP+R+ Q PL                Q H VL+Q ARP  A
Sbjct: 55  APPPAPVAGAVRGEVHGAPERRAQPPLLEPVRRHHHRHVEPVHQAHAVLRQPARPVHA 112



to top

>AK105356:Os05g0298900 |
          Length = 79

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 17/35 (48%), Positives = 19/35 (54%)
 Frame = +1

Query: 241 HPPPDRGRLRRQRHPAPQRQLQDPLQGHRVLQQAR 345
           H PP R RLRR   PA  R    P++G   L QAR
Sbjct: 38  HHPPSRARLRRAVRPA-LRGAPAPVRGGDGLVQAR 71


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 14,317,035
Number of extensions: 265004
Number of successful extensions: 816
Number of sequences better than 10.0: 26
Number of HSP's gapped: 801
Number of HSP's successfully gapped: 27
Length of query: 244
Length of database: 15,399,855
Length adjustment: 98
Effective length of query: 146
Effective length of database: 11,475,837
Effective search space: 1675472202
Effective search space used: 1675472202
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top