ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf41j18 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ400725.1|HVU400725 Hordeum vulgare partial mRNA for putative kinetochore protein (skp1-2 gene) Length = 354 Score = 398 bits (201), Expect = e-107 Identities = 210/213 (98%) Strand = Plus / Plus Query: 260 gacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 gacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaag 76 Query: 320 gtcatcgagtactgcaacaagcacgtccaggccaagcccgccgacgccgccggagctggt 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 77 gtcatcgagtactgcaacaagcacgtccaggccaagcccgccgacgccgccggacctggt 136 Query: 380 gcgtccgatgcgccgccccccgccgatgacctcaagaattgggacgccgagttcgtcaag 439 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 137 gcgtccgatgcgctgccccccgccgatgacctcaagaactgggacgccgagttcgtcaag 196 Query: 440 gtcgaccaagccaccctcttcgacctcatcctg 472 ||||||||||||||||||||||||||||||||| Sbjct: 197 gtcgaccaagccaccctcttcgacctcatcctg 229
>emb|AJ577364.1|TAE577364 Triticum aestivum mRNA for putative SKP1 protein Length = 711 Score = 389 bits (196), Expect = e-104 Identities = 223/232 (96%) Strand = Plus / Plus Query: 134 gcgatggcggccgcgggagacgccggcgagaagaggatggtcacgctcaagagctcggac 193 |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 3 gcgatggcggccgcgggagacgccggcgagaagaagatgatcacgctcaagagctcggac 62 Query: 194 ggggaggaattcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacctg 253 || ||||| |||||||||||||||||||| ||| | ||||||||||| ||||||||| || Sbjct: 63 ggcgaggagttcgaggtggaggaggcggtggccatggagtcgcagacgatccgccacatg 122 Query: 254 atcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 atcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctc 182 Query: 314 tccaaggtcatcgagtactgcaacaagcacgtccaggccaagcccgccgacg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 tccaaggtcatcgagtactgcaacaagcacgtccaggccaagcccgccgacg 234 Score = 121 bits (61), Expect = 4e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 396 cccccgccgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccc 455 ||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 280 cccccgcggaggacctcaagaactgggacgccgagttcgtcaaggtcgaccaggccaccc 339 Query: 456 tcttcgacctcatcctg 472 ||||||||||||||||| Sbjct: 340 tcttcgacctcatcctg 356
>emb|AJ277096.1|HVU277096 Hordeum vulgare mRNA for putative kinetochore protein (skp1 gene) Length = 842 Score = 381 bits (192), Expect = e-102 Identities = 225/236 (95%) Strand = Plus / Plus Query: 133 ggcgatggcggccgcgggagacgccggcgagaagaggatggtcacgctcaagagctcgga 192 ||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 82 ggcgatggcggccgctggagacgccggcgagaagaagatgatcacgctcaagagctcgga 141 Query: 193 cggggaggaattcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacct 252 ||| ||||| |||||||||||||||||||||||| | ||||||||||| ||||||||| | Sbjct: 142 cggcgaggagttcgaggtggaggaggcggtcgccatggagtcgcagacaatccgccacat 201 Query: 253 gatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcct 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 gatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcct 261 Query: 313 ctccaaggtcatcgagtactgcaacaagcacgtccaggccaagcccgccgacgccg 368 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 262 ctccaaggtcatcgagtactgcaacaagcacgtccaggcaaagcccgcagacgccg 317 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 396 cccccgccgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccc 455 ||||||| || ||||||||||| |||||||| |||||||||||||| ||||| || |||| Sbjct: 363 cccccgctgaggacctcaagaactgggacgcagagttcgtcaaggttgaccaggcaaccc 422 Query: 456 tcttcgacctcatcctg 472 ||||||||||||||||| Sbjct: 423 tcttcgacctcatcctg 439
>gb|AY316293.1| Triticum aestivum SKP1/ASK1-like protein (skp1) mRNA, complete cds Length = 822 Score = 379 bits (191), Expect = e-101 Identities = 221/231 (95%) Strand = Plus / Plus Query: 133 ggcgatggcggccgcgggagacgccggcgagaagaggatggtcacgctcaagagctcgga 192 ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| Sbjct: 58 ggcgatggcggccgcgggagacgccggcgagaagaagatgatcacactcaagagctcgga 117 Query: 193 cggggaggaattcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacct 252 ||| ||||| |||||||||||||||||||| ||| | ||||||||||| ||||||||| | Sbjct: 118 cggcgaggagttcgaggtggaggaggcggtggccatggagtcgcagacgatccgccacat 177 Query: 253 gatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcct 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 gatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcct 237 Query: 313 ctccaaggtcatcgagtactgcaacaagcacgtccaggccaagcccgccga 363 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 ctccaaggtcatcgagtactgcaacaagcacgtccaggccaagcccgccga 288 Score = 129 bits (65), Expect = 2e-26 Identities = 74/77 (96%) Strand = Plus / Plus Query: 396 cccccgccgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccc 455 |||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 339 cccccgccgaggacctcaagaactgggacgccgagttcgtcaaggtcgaccaggccaccc 398 Query: 456 tcttcgacctcatcctg 472 ||||||||||||||||| Sbjct: 399 tcttcgacctcatcctg 415
>emb|CT829342.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA102L03, full insert sequence Length = 1190 Score = 272 bits (137), Expect = 2e-69 Identities = 173/185 (93%) Strand = Plus / Plus Query: 161 gagaagaggatggtcacgctcaagagctcggacggggaggaattcgaggtggaggaggcg 220 ||||||| |||| |||| || |||||||| ||||||||||| |||||||||||||||||| Sbjct: 458 gagaagaagatgatcaccctgaagagctccgacggggaggagttcgaggtggaggaggcg 517 Query: 221 gtcgccgtcgagtcgcagaccatccgccacctgatcgaggacgactgcgccgacaacggc 280 || || | ||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 518 gtggcgatggagtcgcagacgatccgccacatgatcgaggacgactgcgccgacaacggc 577 Query: 281 atcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaag 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 atcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaag 637 Query: 341 cacgt 345 ||||| Sbjct: 638 cacgt 642 Score = 117 bits (59), Expect = 6e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 390 cgccgccccccgccgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaag 449 |||||||| ||| ||| ||||||||||| ||||||||||| ||||||||||||||||| | Sbjct: 708 cgccgccctccggcgaggacctcaagaactgggacgccgacttcgtcaaggtcgaccagg 767 Query: 450 ccaccctcttcgacctcatcctg 472 ||||||||||||||||||||||| Sbjct: 768 ccaccctcttcgacctcatcctg 790
>gb|AY598357.1| Oryza sativa (japonica cultivar-group) skp1 protein mRNA, complete cds Length = 836 Score = 272 bits (137), Expect = 2e-69 Identities = 173/185 (93%) Strand = Plus / Plus Query: 161 gagaagaggatggtcacgctcaagagctcggacggggaggaattcgaggtggaggaggcg 220 ||||||| |||| |||| || |||||||| ||||||||||| |||||||||||||||||| Sbjct: 73 gagaagaagatgatcaccctgaagagctccgacggggaggagttcgaggtggaggaggcg 132 Query: 221 gtcgccgtcgagtcgcagaccatccgccacctgatcgaggacgactgcgccgacaacggc 280 || || | ||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 133 gtggcgatggagtcgcagacgatccgccacatgatcgaggacgactgcgccgacaacggc 192 Query: 281 atcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaag 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 atcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaag 252 Query: 341 cacgt 345 ||||| Sbjct: 253 cacgt 257 Score = 117 bits (59), Expect = 6e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 390 cgccgccccccgccgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaag 449 |||||||| ||| ||| ||||||||||| ||||||||||| ||||||||||||||||| | Sbjct: 323 cgccgccctccggcgaggacctcaagaactgggacgccgacttcgtcaaggtcgaccagg 382 Query: 450 ccaccctcttcgacctcatcctg 472 ||||||||||||||||||||||| Sbjct: 383 ccaccctcttcgacctcatcctg 405
>dbj|AK111678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158P16, full insert sequence Length = 867 Score = 272 bits (137), Expect = 2e-69 Identities = 173/185 (93%) Strand = Plus / Plus Query: 161 gagaagaggatggtcacgctcaagagctcggacggggaggaattcgaggtggaggaggcg 220 ||||||| |||| |||| || |||||||| ||||||||||| |||||||||||||||||| Sbjct: 135 gagaagaagatgatcaccctgaagagctccgacggggaggagttcgaggtggaggaggcg 194 Query: 221 gtcgccgtcgagtcgcagaccatccgccacctgatcgaggacgactgcgccgacaacggc 280 || || | ||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 195 gtggcgatggagtcgcagacgatccgccacatgatcgaggacgactgcgccgacaacggc 254 Query: 281 atcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaag 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 atcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaag 314 Query: 341 cacgt 345 ||||| Sbjct: 315 cacgt 319 Score = 117 bits (59), Expect = 6e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 390 cgccgccccccgccgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaag 449 |||||||| ||| ||| ||||||||||| ||||||||||| ||||||||||||||||| | Sbjct: 385 cgccgccctccggcgaggacctcaagaactgggacgccgacttcgtcaaggtcgaccagg 444 Query: 450 ccaccctcttcgacctcatcctg 472 ||||||||||||||||||||||| Sbjct: 445 ccaccctcttcgacctcatcctg 467
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041C22, complete sequence Length = 161172 Score = 264 bits (133), Expect = 4e-67 Identities = 172/185 (92%) Strand = Plus / Plus Query: 161 gagaagaggatggtcacgctcaagagctcggacggggaggaattcgaggtggaggaggcg 220 ||||||| |||| |||| || |||||||| ||||||||||| ||||||||||||||| || Sbjct: 106705 gagaagaagatgatcaccctgaagagctccgacggggaggagttcgaggtggaggagccg 106764 Query: 221 gtcgccgtcgagtcgcagaccatccgccacctgatcgaggacgactgcgccgacaacggc 280 || || | ||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 106765 gtggcgatggagtcgcagacgatccgccacatgatcgaggacgactgcgccgacaacggc 106824 Query: 281 atcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaag 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106825 atcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaag 106884 Query: 341 cacgt 345 ||||| Sbjct: 106885 cacgt 106889 Score = 117 bits (59), Expect = 6e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 390 cgccgccccccgccgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaag 449 |||||||| ||| ||| ||||||||||| ||||||||||| ||||||||||||||||| | Sbjct: 106955 cgccgccctccggcgaggacctcaagaactgggacgccgacttcgtcaaggtcgaccagg 107014 Query: 450 ccaccctcttcgacctcatcctg 472 ||||||||||||||||||||||| Sbjct: 107015 ccaccctcttcgacctcatcctg 107037
>gb|DQ245406.1| Zea mays clone 15254 mRNA sequence Length = 816 Score = 224 bits (113), Expect = 3e-55 Identities = 167/185 (90%) Strand = Plus / Plus Query: 164 aagaggatggtcacgctcaagagctcggacggggaggaattcgaggtggaggaggcggtc 223 ||||||||| ||||||||| |||||| ||| ||||| |||||||||||||| ||||| Sbjct: 85 aagaggatgatcacgctcaggagctccgacttagaggagttcgaggtggaggaagcggtg 144 Query: 224 gccgtcgagtcgcagaccatccgccacctgatcgaggacgactgcgccgacaacggcatc 283 ||| | ||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 145 gccatggagtcgcagactctccgccacatgatcgaggacgactgcgccgacaacggcatc 204 Query: 284 ccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaagcac 343 |||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||| Sbjct: 205 ccgctccccaacgtcaactccaggatcctctctaaggtcatcgagtactgcaacagtcac 264 Query: 344 gtcca 348 ||||| Sbjct: 265 gtcca 269 Score = 67.9 bits (34), Expect = 5e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 407 gacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctc 466 |||||||||| |||||||| ||||||||||||| ||||| || || |||||||||||| Sbjct: 316 gacctcaagagctgggacgcgaagttcgtcaaggtggaccaggctacgctcttcgacctc 375 Query: 467 atcctg 472 |||||| Sbjct: 376 atcctg 381
>gb|DQ244447.1| Zea mays clone 7633 mRNA sequence Length = 948 Score = 198 bits (100), Expect = 2e-47 Identities = 166/188 (88%) Strand = Plus / Plus Query: 158 ggcgagaagaggatggtcacgctcaagagctcggacggggaggaattcgaggtggaggag 217 |||||||||| |||| | || ||||| ||||| || || ||||| ||||||||||| ||| Sbjct: 120 ggcgagaagaagatgataaccctcaaaagctccgatggcgaggagttcgaggtggaagag 179 Query: 218 gcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggacgactgcgccgacaac 277 ||||| || | ||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 180 gcggtggcgatggagtcgcagaccatccgccacatgatcgaggatgactgcgccgacaac 239 Query: 278 ggcatcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaac 337 || ||||| || || |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 240 ggtatccctcttcctaacgtcaactccaagatcctatccaaggtaatcgagtactgcaac 299 Query: 338 aagcacgt 345 |||||||| Sbjct: 300 aagcacgt 307 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 407 gacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctc 466 ||||||||||| ||||| || || ||||||||||||||||| ||||| || ||||||||| Sbjct: 399 gacctcaagaactgggatgcggacttcgtcaaggtcgaccaggccacgcttttcgacctc 458 Query: 467 atc 469 ||| Sbjct: 459 atc 461
>gb|BT016585.1| Zea mays clone Contig418 mRNA sequence Length = 892 Score = 198 bits (100), Expect = 2e-47 Identities = 166/188 (88%) Strand = Plus / Plus Query: 158 ggcgagaagaggatggtcacgctcaagagctcggacggggaggaattcgaggtggaggag 217 |||||||||| |||| | || ||||| ||||| || || ||| | ||||||||||| ||| Sbjct: 74 ggcgagaagaagatgataaccctcaaaagctccgatggcgagcagttcgaggtggaagag 133 Query: 218 gcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggacgactgcgccgacaac 277 ||||| || | ||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 134 gcggtggcgatggagtcgcagaccatccgccacatgatcgaggatgactgcgccgacaac 193 Query: 278 ggcatcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaac 337 |||||||| || || |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 194 ggcatccctcttcctaacgtcaactccaagatcctatccaaggtaatcgagtactgcaac 253 Query: 338 aagcacgt 345 |||||||| Sbjct: 254 aagcacgt 261 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 407 gacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctc 466 ||||||||||| ||||| || || ||||||||||||||||| ||||| || ||||||||| Sbjct: 353 gacctcaagaactgggatgcggacttcgtcaaggtcgaccaggccacgcttttcgacctc 412 Query: 467 atc 469 ||| Sbjct: 413 atc 415
>gb|AY103829.1| Zea mays PCO151935 mRNA sequence Length = 924 Score = 198 bits (100), Expect = 2e-47 Identities = 166/188 (88%) Strand = Plus / Plus Query: 158 ggcgagaagaggatggtcacgctcaagagctcggacggggaggaattcgaggtggaggag 217 |||||||||| |||| | || ||||| ||||| || || ||||| ||||||||||| ||| Sbjct: 123 ggcgagaagaagatgataaccctcaaaagctccgatggcgaggagttcgaggtggaagag 182 Query: 218 gcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggacgactgcgccgacaac 277 ||||| || | ||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 183 gcggtggcgatggagtcgcagaccatccgccacatgatcgaggatgactgcgccgacaac 242 Query: 278 ggcatcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaac 337 || ||||| || || |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 243 ggtatccctcttcctaacgtcaactccaagatcctatccaaggtaatcgagtactgcaac 302 Query: 338 aagcacgt 345 |||||||| Sbjct: 303 aagcacgt 310 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 407 gacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctc 466 ||||||||||| ||||| || || ||||||||||||||||| ||||| || ||||||||| Sbjct: 402 gacctcaagaactgggatgcggacttcgtcaaggtcgaccaggccacgcttttcgacctc 461 Query: 467 atc 469 ||| Sbjct: 462 atc 464
>dbj|AK241794.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065208D18, full insert sequence Length = 857 Score = 161 bits (81), Expect = 4e-36 Identities = 132/149 (88%) Strand = Plus / Plus Query: 203 ttcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggac 262 |||||||| | |||||| || ||| | ||||| ||||||||||||||| ||||||||||| Sbjct: 134 ttcgaggtcgcggaggccgtggccatggagtcccagaccatccgccacatgatcgaggac 193 Query: 263 gactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtc 322 | |||||||||| |||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 194 aagtgcgccgacaccggcatcccgctccccaacgtctccgccaagatcctctccaaggta 253 Query: 323 atcgagtactgcaacaagcacgtccaggc 351 ||||||||||||| |||||||||| |||| Sbjct: 254 atcgagtactgcagcaagcacgtcgaggc 282 Score = 77.8 bits (39), Expect = 5e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 422 gacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctcatcctg 472 |||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 377 gacgccgagttcgtcaaggtcgaccagtccaccctcttcgatctcatcctg 427
>ref|NM_001070340.1| Oryza sativa (japonica cultivar-group) Os09g0539500 (Os09g0539500) mRNA, complete cds Length = 618 Score = 161 bits (81), Expect = 4e-36 Identities = 132/149 (88%) Strand = Plus / Plus Query: 203 ttcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggac 262 |||||||| | |||||| || ||| | ||||| ||||||||||||||| ||||||||||| Sbjct: 61 ttcgaggtcgcggaggccgtggccatggagtcccagaccatccgccacatgatcgaggac 120 Query: 263 gactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtc 322 | |||||||||| |||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 121 aagtgcgccgacaccggcatcccgctccccaacgtctccgccaagatcctctccaaggta 180 Query: 323 atcgagtactgcaacaagcacgtccaggc 351 ||||||||||||| |||||||||| |||| Sbjct: 181 atcgagtactgcagcaagcacgtcgaggc 209 Score = 77.8 bits (39), Expect = 5e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 422 gacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctcatcctg 472 |||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 304 gacgccgagttcgtcaaggtcgaccagtccaccctcttcgatctcatcctg 354
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 161 bits (81), Expect = 4e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 203 ttcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggac 262 |||||||| | |||||| || ||| | ||||| ||||||||||||||| ||||||||||| Sbjct: 20944302 ttcgaggtcgcggaggccgtggccatggagtcccagaccatccgccacatgatcgaggac 20944243 Query: 263 gactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtc 322 | |||||||||| |||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 20944242 aagtgcgccgacaccggcatcccgctccccaacgtctccgccaagatcctctccaaggta 20944183 Query: 323 atcgagtactgcaacaagcacgtccaggc 351 ||||||||||||| |||||||||| |||| Sbjct: 20944182 atcgagtactgcagcaagcacgtcgaggc 20944154 Score = 77.8 bits (39), Expect = 5e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 422 gacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctcatcctg 472 |||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 20944059 gacgccgagttcgtcaaggtcgaccagtccaccctcttcgatctcatcctg 20944009 Score = 67.9 bits (34), Expect = 5e-08 Identities = 81/96 (84%), Gaps = 3/96 (3%) Strand = Plus / Minus Query: 252 tgatcgaggacgactgcgccgacaacggc---atcccgctccccaacgtcaactccaaga 308 |||||||||| ||||||||| ||||||| ||||| ||| |||||||| |||| | | Sbjct: 5540986 tgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtcgcctccgata 5540927 Query: 309 tcctctccaaggtcatcgagtactgcaacaagcacg 344 ||||| ||||||| ||||||||||||||||||||| Sbjct: 5540926 tcctcgccaaggtggtcgagtactgcaacaagcacg 5540891 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 252 tgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcc 311 ||||||||||||||||| | || |||||| |||| |||||||||||| |||||| ||| Sbjct: 5500590 tgatcgaggacgactgcacggagaacggcgtccctctccccaacgtcgcctccaacgtcc 5500531 Query: 312 tctccaaggtcatcgagtactgcaa 336 || ||||||| |||| |||||||| Sbjct: 5500530 tcgccaaggtgctcgactactgcaa 5500506 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 252 tgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcc 311 |||||||||||| |||| | || |||||| |||| |||||||||||| |||||| ||| Sbjct: 5534104 tgatcgaggacggctgcacggagaacggcgtccctctccccaacgtcgcctccaacgtcc 5534045 Query: 312 tctccaaggtcatcgagtactgcaa 336 || ||||||| ||||||||||||| Sbjct: 5534044 tcgccaaggtgctcgagtactgcaa 5534020 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 255 tcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctct 314 |||||||||| ||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 14573866 tcgaggacgagtgcaccgacaacggcgtccccctccccaacgtcccctccgccgtcctcg 14573807 Query: 315 ccaaggtcatcgagtactgcaacaagcacg 344 ||||||| |||||||||||| | |||||| Sbjct: 14573806 ccaaggtgctcgagtactgcagcgagcacg 14573777 Score = 46.1 bits (23), Expect = 0.18 Identities = 59/71 (83%) Strand = Plus / Minus Query: 274 caacggcatcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactg 333 |||||||||||| |||||||||||| | | | ||||| ||||||| |||||||||| Sbjct: 5418239 caacggcatccctctccccaacgtcgccggcgacgtcctcgccaaggtggtcgagtactg 5418180 Query: 334 caacaagcacg 344 || |||||||| Sbjct: 5418179 caccaagcacg 5418169 Score = 44.1 bits (22), Expect = 0.70 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand = Plus / Minus Query: 252 tgatcgaggacgactgcgccgacaacggc---atcccgctccccaacgtcaactccaaga 308 |||||||||| ||||||||| ||||||| ||||| ||| |||||||| | || | | Sbjct: 5521014 tgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtcgccgccgaca 5520955 Query: 309 tcctctccaaggtcatcgagtactgcaacaagcacg 344 ||||| ||| ||| ||||||||||||||| ||||| Sbjct: 5520954 tcctcgccatggtggtcgagtactgcaacaggcacg 5520919
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 161 bits (81), Expect = 4e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 203 ttcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggac 262 |||||||| | |||||| || ||| | ||||| ||||||||||||||| ||||||||||| Sbjct: 36391 ttcgaggtcgcggaggccgtggccatggagtcccagaccatccgccacatgatcgaggac 36332 Query: 263 gactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtc 322 | |||||||||| |||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 36331 aagtgcgccgacaccggcatcccgctccccaacgtctccgccaagatcctctccaaggta 36272 Query: 323 atcgagtactgcaacaagcacgtccaggc 351 ||||||||||||| |||||||||| |||| Sbjct: 36271 atcgagtactgcagcaagcacgtcgaggc 36243 Score = 77.8 bits (39), Expect = 5e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 422 gacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctcatcctg 472 |||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 36148 gacgccgagttcgtcaaggtcgaccagtccaccctcttcgatctcatcctg 36098
>ref|NM_001052125.1| Oryza sativa (japonica cultivar-group) Os02g0101600 (Os02g0101600) mRNA, complete cds Length = 306 Score = 159 bits (80), Expect = 2e-35 Identities = 148/170 (87%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 176 acgctcaagagctcggacggggaggaattcgaggtggaggaggcggtcgccgtcgagtcg 235 ||||| ||||||||||| || ||||||||||||||||||| |||| | | | ||||| Sbjct: 37 acgctgaagagctcggatggagaggaattcgaggtggagg---cggtgggcatggagtct 93 Query: 236 cagaccatccgccacctgatcgaggacgactgcgccgacaacggcatcccgctccccaac 295 ||||||||||| ||| |||||||||| | ||||||||||| || ||||| ||||||||| Sbjct: 94 cagaccatccggcacatgatcgaggataaatgcgccgacaatgggatccccctccccaac 153 Query: 296 gtcaactccaagatcctctccaaggtcatcgagtactgcaacaagcacgt 345 || || |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 154 gtgaattccaagatcctctccaaggttatcgagtactgcaacaagcacgt 203 Score = 87.7 bits (44), Expect = 5e-14 Identities = 60/64 (93%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 406 tgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacct 465 |||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 237 tgacctcaagaactgg-acgccgacttcgtcaaggtcgaccaggccaccctcttcgacct 295 Query: 466 catc 469 |||| Sbjct: 296 catc 299
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 159 bits (80), Expect = 2e-35 Identities = 148/170 (87%), Gaps = 3/170 (1%) Strand = Plus / Minus Query: 176 acgctcaagagctcggacggggaggaattcgaggtggaggaggcggtcgccgtcgagtcg 235 ||||| ||||||||||| || ||||||||||||||||||| |||| | | | ||||| Sbjct: 85601 acgctgaagagctcggatggagaggaattcgaggtggagg---cggtgggcatggagtct 85545 Query: 236 cagaccatccgccacctgatcgaggacgactgcgccgacaacggcatcccgctccccaac 295 ||||||||||| ||| |||||||||| | ||||||||||| || ||||| ||||||||| Sbjct: 85544 cagaccatccggcacatgatcgaggataaatgcgccgacaatgggatccccctccccaac 85485 Query: 296 gtcaactccaagatcctctccaaggtcatcgagtactgcaacaagcacgt 345 || || |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 85484 gtgaattccaagatcctctccaaggttatcgagtactgcaacaagcacgt 85435 Score = 87.7 bits (44), Expect = 5e-14 Identities = 60/64 (93%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 406 tgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacct 465 |||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 85401 tgacctcaagaactgg-acgccgacttcgtcaaggtcgaccaggccaccctcttcgacct 85343 Query: 466 catc 469 |||| Sbjct: 85342 catc 85339
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 159 bits (80), Expect = 2e-35 Identities = 148/170 (87%), Gaps = 3/170 (1%) Strand = Plus / Minus Query: 176 acgctcaagagctcggacggggaggaattcgaggtggaggaggcggtcgccgtcgagtcg 235 ||||| ||||||||||| || ||||||||||||||||||| |||| | | | ||||| Sbjct: 80210 acgctgaagagctcggatggagaggaattcgaggtggagg---cggtgggcatggagtct 80154 Query: 236 cagaccatccgccacctgatcgaggacgactgcgccgacaacggcatcccgctccccaac 295 ||||||||||| ||| |||||||||| | ||||||||||| || ||||| ||||||||| Sbjct: 80153 cagaccatccggcacatgatcgaggataaatgcgccgacaatgggatccccctccccaac 80094 Query: 296 gtcaactccaagatcctctccaaggtcatcgagtactgcaacaagcacgt 345 || || |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 80093 gtgaattccaagatcctctccaaggttatcgagtactgcaacaagcacgt 80044 Score = 87.7 bits (44), Expect = 5e-14 Identities = 60/64 (93%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 406 tgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacct 465 |||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 80010 tgacctcaagaactgg-acgccgacttcgtcaaggtcgaccaggccaccctcttcgacct 79952 Query: 466 catc 469 |||| Sbjct: 79951 catc 79948
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 159 bits (80), Expect = 2e-35 Identities = 148/170 (87%), Gaps = 3/170 (1%) Strand = Plus / Minus Query: 176 acgctcaagagctcggacggggaggaattcgaggtggaggaggcggtcgccgtcgagtcg 235 ||||| ||||||||||| || ||||||||||||||||||| |||| | | | ||||| Sbjct: 34628 acgctgaagagctcggatggagaggaattcgaggtggagg---cggtgggcatggagtct 34572 Query: 236 cagaccatccgccacctgatcgaggacgactgcgccgacaacggcatcccgctccccaac 295 ||||||||||| ||| |||||||||| | ||||||||||| || ||||| ||||||||| Sbjct: 34571 cagaccatccggcacatgatcgaggataaatgcgccgacaatgggatccccctccccaac 34512 Query: 296 gtcaactccaagatcctctccaaggtcatcgagtactgcaacaagcacgt 345 || || |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 34511 gtgaattccaagatcctctccaaggttatcgagtactgcaacaagcacgt 34462 Score = 87.7 bits (44), Expect = 5e-14 Identities = 60/64 (93%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 406 tgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacct 465 |||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 34428 tgacctcaagaactgg-acgccgacttcgtcaaggtcgaccaggccaccctcttcgacct 34370 Query: 466 catc 469 |||| Sbjct: 34369 catc 34366
>gb|AY601675.1| Zantedeschia hybrid cultivar Skp1/Ask1-like protein mRNA, complete cds Length = 807 Score = 143 bits (72), Expect = 1e-30 Identities = 141/164 (85%) Strand = Plus / Plus Query: 182 aagagctcggacggggaggaattcgaggtggaggaggcggtcgccgtcgagtcgcagacc 241 |||||||| |||||||||| ||||||||||||||| |||| ||| | |||||||||||| Sbjct: 155 aagagctccgacggggaggtgttcgaggtggaggagacggtagccatggagtcgcagacc 214 Query: 242 atccgccacctgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaac 301 ||||| |||||||||||||||||||| ||| | ||||| ||||||| |||||||||| | Sbjct: 215 atccggaacctgatcgaggacgactgcaccgccgacggcgtcccgctgcccaacgtcacc 274 Query: 302 tccaagatcctctccaaggtcatcgagtactgcaacaagcacgt 345 | ||||||| ||||||| ||||||| |||||| |||||||| Sbjct: 275 gggaggatcctcgccaaggtgatcgagttctgcaagaagcacgt 318 Score = 67.9 bits (34), Expect = 5e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 419 tgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctcatcctg 472 ||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 383 tgggatgccgacttcgtgaaggtcgaccagaccaccctcttcgacctcatcctg 436
>gb|AY104915.1| Zea mays PCO082477 mRNA sequence Length = 1855 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 255 tcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctct 314 ||||||||| |||||||||||| |||||||||||||||||||||| |||| | |||||| Sbjct: 236 tcgaggacggctgcgccgacaaaggcatcccgctccccaacgtcacctcccacatcctcg 295 Query: 315 ccaaggtcatcgagtactgcaacaagcacg 344 ||||||||||||||| ||||||||||||| Sbjct: 296 tcaaggtcatcgagtattgcaacaagcacg 325
>dbj|AB057431.1| Brassica juncea BjSKP1e mRNA for kinetochore protein, complete cds Length = 653 Score = 111 bits (56), Expect = 4e-21 Identities = 122/144 (84%) Strand = Plus / Plus Query: 203 ttcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggac 262 |||||||| || ||||| || ||| ||||||| ||||||||| ||| || |||| ||| Sbjct: 72 ttcgaggtcgacgaggccgtggccctcgagtctcagaccatcgctcacatggtcgaagac 131 Query: 263 gactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtc 322 ||||||| ||||||||| ||||| ||||||||||||| | |||||||||| ||||||| Sbjct: 132 gactgcgtcgacaacgggatccctctccccaacgtcaccagcaagatcctcgccaaggtg 191 Query: 323 atcgagtactgcaacaagcacgtc 346 || ||||||||||| ||||||||| Sbjct: 192 attgagtactgcaagaagcacgtc 215 Score = 67.9 bits (34), Expect = 5e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 403 cgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcga 462 ||||||||||||| ||||||||||||||| | ||| |||| ||||| ||||||||||| Sbjct: 266 cgatgacctcaaggcgtgggacgccgagttcatgaagatcgatcaagctaccctcttcga 325 Query: 463 cctcatcctg 472 ||||||||| Sbjct: 326 gctcatcctg 335
>gb|DQ244516.1| Zea mays clone 8749 mRNA sequence Length = 737 Score = 103 bits (52), Expect = 9e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 255 tcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctct 314 |||| ||||||||| |||||||||||||||| || |||||||||| | |||||||||| Sbjct: 135 tcgaagacgactgcaccgacaacggcatccctcttcccaacgtcaccggcaagatcctcg 194 Query: 315 ccaaggtcatcgagtactgcaacaagcacgtc 346 |||||||||||||||| ||||| ||||||||| Sbjct: 195 ccaaggtcatcgagtattgcaagaagcacgtc 226 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 407 gacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctc 466 ||||||||| |||||| ||||||||| | || |||| ||||| ||||||||||| ||| Sbjct: 284 gacctcaaggcttgggatgccgagttcatgaatatcgatcaagctaccctcttcgaactc 343 Query: 467 atcctg 472 |||||| Sbjct: 344 atcctg 349
>dbj|AB057427.1| Brassica juncea BjSKP1a mRNA for kinetochore protein, complete cds Length = 531 Score = 103 bits (52), Expect = 9e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 255 tcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctct 314 |||| ||||||||| |||||||||||||||| || |||||||||| | |||||||||| Sbjct: 123 tcgaagacgactgcaccgacaacggcatccctcttcccaacgtcaccggcaagatcctcg 182 Query: 315 ccaaggtcatcgagtactgcaacaagcacgtc 346 |||||||||||||||| ||||| ||||||||| Sbjct: 183 ccaaggtcatcgagtattgcaagaagcacgtc 214 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 407 gacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctc 466 ||||||||| |||||| ||||||||| | || |||| ||||| ||||||||||| ||| Sbjct: 272 gacctcaaggcttgggatgccgagttcatgaatatcgatcaagctaccctcttcgaactc 331 Query: 467 atcctg 472 |||||| Sbjct: 332 atcctg 337
>emb|AM111344.1| Plantago major partial mRNA for fimbriata-associated protein (fap2 gene) Length = 816 Score = 97.6 bits (49), Expect = 5e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 224 gccgtcgagtcgcagaccatccgccacctgatcgaggacgactgcgccgacaacggcatc 283 ||||| ||||| ||||||||| ||| ||||||||||||| ||||| ||||||| |||| Sbjct: 132 gccgtggagtctcagaccatcaagcacatgatcgaggacgattgcgctgacaacgtcatc 191 Query: 284 ccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaa 336 || ||||| || |||| | ||| ||||||||||||||||||||||||||||| Sbjct: 192 ccactcccaaatgtcaccggcaaaatcctctccaaggtcatcgagtactgcaa 244
>gb|AC189295.1| Brassica rapa subsp. pekinensis clone KBrB026G01, complete sequence Length = 122209 Score = 95.6 bits (48), Expect = 2e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 203 ttcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggac 262 |||||||| || |||||||| || ||||||| |||||||| |||| || |||| ||| Sbjct: 67790 ttcgaggtcgacgaggcggtggctctcgagtctcagaccatagcccacatggtcgaagac 67849 Query: 263 gactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtc 322 ||||||| ||||||||| ||||||| |||||||||| |||||||||| ||||||| Sbjct: 67850 gactgcgtcgacaacggagtcccgcttcccaacgtcacgagcaagatcctcgccaaggtg 67909 Query: 323 atcgagtactgcaacaagcacgtc 346 || ||||||||||| ||||||||| Sbjct: 67910 attgagtactgcaagaagcacgtc 67933 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Plus Query: 403 cgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcga 462 ||||||||||||| |||||| || ||||| | ||| |||| ||||| ||||||||||| Sbjct: 67984 cgatgacctcaaggcttgggatgctgagtttatgaagatcgatcaagctaccctcttcga 68043 Query: 463 cctcatcctg 472 ||||||||| Sbjct: 68044 actcatcctg 68053
>dbj|AB057432.1| Brassica juncea BjSKP1f mRNA for kinetochore protein, complete cds Length = 807 Score = 95.6 bits (48), Expect = 2e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 203 ttcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggac 262 |||||||| || |||||||||||| ||||||| |||||||| |||| || | || ||| Sbjct: 129 ttcgaggtcgacgaggcggtcgccctcgagtctcagaccatagcccacatggttgaagac 188 Query: 263 gactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtc 322 ||||||| ||||||||| |||| || |||||||||| |||||||||| ||||||| Sbjct: 189 gactgcgtcgacaacggtgtccctcttcccaacgtcacgagcaagatcctcgccaaggtg 248 Query: 323 atcgagtactgcaacaagcacgtc 346 || ||||||||||| ||||||||| Sbjct: 249 attgagtactgcaagaagcacgtc 272 Score = 44.1 bits (22), Expect = 0.70 Identities = 55/66 (83%) Strand = Plus / Plus Query: 407 gacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctc 466 ||||||||| |||||| || ||||| | ||| |||| ||||| ||||||||||| ||| Sbjct: 327 gacctcaaggcttgggatgctgagtttatgaagatcgatcaagctaccctcttcgaactc 386 Query: 467 atcctg 472 |||||| Sbjct: 387 atcctg 392
>gb|DQ206627.1| Brassica napus SKP1 (SKP1) mRNA, complete cds Length = 753 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 255 tcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctct 314 |||| ||||||||| ||||||||| |||||| || |||||||||| | |||||||||| Sbjct: 145 tcgaagacgactgcaccgacaacgacatccctcttcccaacgtcaccggcaagatcctcg 204 Query: 315 ccaaggtcatcgagtactgcaacaagcacgtc 346 ||||||| |||||||||||||| ||||||||| Sbjct: 205 ccaaggtgatcgagtactgcaagaagcacgtc 236 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 403 cgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcga 462 ||||||||||||| |||||| ||||||||| | ||| |||| || || ||||||||||| Sbjct: 287 cgatgacctcaaggcttgggatgccgagttcatgaagatcgatcaggctaccctcttcga 346 Query: 463 cctcatcctg 472 ||||||||| Sbjct: 347 actcatcctg 356
>gb|EF051310.1| Gymnadenia conopsea kinetochore protein-like mRNA, complete sequence Length = 789 Score = 93.7 bits (47), Expect = 8e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 232 gtcgcagaccatccgccacctgatcgaggacgactgcgccgacaacggcatcccgctccc 291 ||||||||| ||||| || |||| |||||||||||||| || | ||| || ||||| || Sbjct: 189 gtcgcagacgatccggcatatgattgaggacgactgcgcggagagcgggataccgcttcc 248 Query: 292 caacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaagcacgtc 346 |||||||||| |||||||||| ||||||| || ||||||||||| ||||||||| Sbjct: 249 caacgtcaacagcaagatcctcgccaaggttatagagtactgcaagaagcacgtc 303 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 410 ctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctcatc 469 ||||||||||||||| | || ||||||||||||||||| ||||| || |||||||| ||| Sbjct: 358 ctcaagaattgggactcggacttcgtcaaggtcgaccaggccactctattcgaccttatc 417 Query: 470 ctg 472 ||| Sbjct: 418 ctg 420
>dbj|AB057429.1| Brassica juncea BjSKP1c mRNA for kinetochore protein, complete cds Length = 734 Score = 87.7 bits (44), Expect = 5e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 203 ttcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggac 262 |||||||| || ||||| || || ||||||| |||||||| |||| || |||| ||| Sbjct: 53 ttcgaggtcgacgaggccgtggctctcgagtctcagaccatagcccacatggtcgaagac 112 Query: 263 gactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtc 322 ||||||| ||||||||| ||||||| |||||||||| |||||||||| ||||||| Sbjct: 113 gactgcgtcgacaacggagtcccgcttcccaacgtcacgagcaagatcctcgccaaggtg 172 Query: 323 atcgagtactgcaacaagcacgtc 346 || ||||||||||| ||||||||| Sbjct: 173 attgagtactgcaagaagcacgtc 196 Score = 44.1 bits (22), Expect = 0.70 Identities = 58/70 (82%) Strand = Plus / Plus Query: 403 cgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcga 462 ||||||||||||| |||||| || ||||| | ||| |||| ||||| |||||||| || Sbjct: 247 cgatgacctcaaggcttgggatgctgagtttatgaagatcgatcaagctaccctctttga 306 Query: 463 cctcatcctg 472 ||||||||| Sbjct: 307 gctcatcctg 316
>dbj|AB057430.1| Brassica juncea BjSKP1d mRNA for kinetochore protein, complete cds Length = 596 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 255 tcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctct 314 |||| ||||||||| ||| ||||| ||||| ||||| ||||||| |||||||||| Sbjct: 118 tcgaagacgactgcatcgagaacggtatccctctccctaacgtcacgagcaagatcctcg 177 Query: 315 ccaaggtcatcgagtactgcaacaagcacgtc 346 |||||||||||||||||||||| ||||||||| Sbjct: 178 ccaaggtcatcgagtactgcaagaagcacgtc 209 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Plus Query: 403 cgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcga 462 ||||||||||||| ||||| |||||||| | ||| |||| ||||| ||||||||||| Sbjct: 263 cgatgacctcaaggcgtgggataccgagttcatgaagatcgatcaagcaaccctcttcga 322 Query: 463 cctcatcctg 472 ||||||||| Sbjct: 323 actcatcctg 332
>emb|Y14857.1|AMFAP2 Antirrhinum majus mRNA for fimbriata-associated protein 2, partial Length = 498 Score = 73.8 bits (37), Expect = 8e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 252 tgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcc 311 ||||||||||||| ||||||||||||| ||||| | || ||||||| | ||| |||| Sbjct: 107 tgatcgaggacgattgcgccgacaacgtgatccccttgcctaacgtcaccggcaaaatcc 166 Query: 312 tctccaaggtcatcgagtactgcaa 336 ||||||| ||||||||||||||||| Sbjct: 167 tctccaaagtcatcgagtactgcaa 191
>ref|NM_001069282.1| Oryza sativa (japonica cultivar-group) Os09g0274800 (Os09g0274800) mRNA, complete cds Length = 519 Score = 67.9 bits (34), Expect = 5e-08 Identities = 81/96 (84%), Gaps = 3/96 (3%) Strand = Plus / Plus Query: 252 tgatcgaggacgactgcgccgacaacggc---atcccgctccccaacgtcaactccaaga 308 |||||||||| ||||||||| ||||||| ||||| ||| |||||||| |||| | | Sbjct: 131 tgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtcgcctccgata 190 Query: 309 tcctctccaaggtcatcgagtactgcaacaagcacg 344 ||||| ||||||| ||||||||||||||||||||| Sbjct: 191 tcctcgccaaggtggtcgagtactgcaacaagcacg 226
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 287 ctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaagcacg 344 |||||||||||| ||||||| ||||| ||||||||||||| ||||||| |||||||| Sbjct: 2343741 ctccccaacgtcgcctccaaggtcctcgccaaggtcatcgaatactgcatcaagcacg 2343798 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 265 ctgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtcat 324 ||||| |||||| ||| ||||||||||||||||| ||||||||| |||| | | ||| || Sbjct: 25854338 ctgcgtcgacaagggcttcccgctccccaacgtcgactccaagaccctcgcgagggtgat 25854397 Query: 325 cgagtactgcaacaagcacg 344 | |||||||| || |||||| Sbjct: 25854398 ccagtactgcgacgagcacg 25854417 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 287 ctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaagcacg 344 |||||||||||| ||||||| ||||| ||||||||||||| |||||| |||||||| Sbjct: 2318323 ctccccaacgtcgcctccaaggtcctcgccaaggtcatcgaatactgcgtcaagcacg 2318266 Score = 58.0 bits (29), Expect = 5e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 280 catcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaa 339 ||||||||||||||||||| ||||||||| |||| | ||||| ||| ||||||| || | Sbjct: 25864975 catcccgctccccaacgtcgactccaagaccctcgcgaaggtgatcccgtactgcgacga 25865034 Query: 340 gcacg 344 ||||| Sbjct: 25865035 gcacg 25865039 Score = 46.1 bits (23), Expect = 0.18 Identities = 44/51 (86%) Strand = Plus / Plus Query: 282 tcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtact 332 ||||||||||||||||| |||| |||| |||| ||||| |||||||||| Sbjct: 25861375 tcccgctccccaacgtcgactctaagaccctcgagaaggtgatcgagtact 25861425 Score = 42.1 bits (21), Expect = 2.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 280 catcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaa 339 |||||||||||| |||||| || ||||| |||| ||||| ||||||||||| |||| Sbjct: 25844742 catcccgctcccggacgtcagctacaagaccctcaagaaggtggtcgagtactgcgacaa 25844801 Query: 340 gcacg 344 ||||| Sbjct: 25844802 gcacg 25844806
>dbj|AP005547.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1031_C12 Length = 157574 Score = 67.9 bits (34), Expect = 5e-08 Identities = 81/96 (84%), Gaps = 3/96 (3%) Strand = Plus / Minus Query: 252 tgatcgaggacgactgcgccgacaacggc---atcccgctccccaacgtcaactccaaga 308 |||||||||| ||||||||| ||||||| ||||| ||| |||||||| |||| | | Sbjct: 146825 tgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtcgcctccgata 146766 Query: 309 tcctctccaaggtcatcgagtactgcaacaagcacg 344 ||||| ||||||| ||||||||||||||||||||| Sbjct: 146765 tcctcgccaaggtggtcgagtactgcaacaagcacg 146730 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 252 tgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcc 311 ||||||||||||||||| | || |||||| |||| |||||||||||| |||||| ||| Sbjct: 106429 tgatcgaggacgactgcacggagaacggcgtccctctccccaacgtcgcctccaacgtcc 106370 Query: 312 tctccaaggtcatcgagtactgcaa 336 || ||||||| |||| |||||||| Sbjct: 106369 tcgccaaggtgctcgactactgcaa 106345 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 252 tgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcc 311 |||||||||||| |||| | || |||||| |||| |||||||||||| |||||| ||| Sbjct: 139943 tgatcgaggacggctgcacggagaacggcgtccctctccccaacgtcgcctccaacgtcc 139884 Query: 312 tctccaaggtcatcgagtactgcaa 336 || ||||||| ||||||||||||| Sbjct: 139883 tcgccaaggtgctcgagtactgcaa 139859 Score = 46.1 bits (23), Expect = 0.18 Identities = 59/71 (83%) Strand = Plus / Minus Query: 274 caacggcatcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactg 333 |||||||||||| |||||||||||| | | | ||||| ||||||| |||||||||| Sbjct: 24078 caacggcatccctctccccaacgtcgccggcgacgtcctcgccaaggtggtcgagtactg 24019 Query: 334 caacaagcacg 344 || |||||||| Sbjct: 24018 caccaagcacg 24008 Score = 44.1 bits (22), Expect = 0.70 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand = Plus / Minus Query: 252 tgatcgaggacgactgcgccgacaacggc---atcccgctccccaacgtcaactccaaga 308 |||||||||| ||||||||| ||||||| ||||| ||| |||||||| | || | | Sbjct: 126853 tgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtcgccgccgaca 126794 Query: 309 tcctctccaaggtcatcgagtactgcaacaagcacg 344 ||||| ||| ||| ||||||||||||||| ||||| Sbjct: 126793 tcctcgccatggtggtcgagtactgcaacaggcacg 126758
>dbj|AP005878.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0012I09 Length = 127774 Score = 67.9 bits (34), Expect = 5e-08 Identities = 81/96 (84%), Gaps = 3/96 (3%) Strand = Plus / Minus Query: 252 tgatcgaggacgactgcgccgacaacggc---atcccgctccccaacgtcaactccaaga 308 |||||||||| ||||||||| ||||||| ||||| ||| |||||||| |||| | | Sbjct: 19516 tgatcgaggatgactgcgccaccaacggcgccatccctctcgccaacgtcgcctccgata 19457 Query: 309 tcctctccaaggtcatcgagtactgcaacaagcacg 344 ||||| ||||||| ||||||||||||||||||||| Sbjct: 19456 tcctcgccaaggtggtcgagtactgcaacaagcacg 19421 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 252 tgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcc 311 |||||||||||| |||| | || |||||| |||| |||||||||||| |||||| ||| Sbjct: 12634 tgatcgaggacggctgcacggagaacggcgtccctctccccaacgtcgcctccaacgtcc 12575 Query: 312 tctccaaggtcatcgagtactgcaa 336 || ||||||| ||||||||||||| Sbjct: 12574 tcgccaaggtgctcgagtactgcaa 12550
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 287 ctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaagcacg 344 |||||||||||| ||||||| ||||| ||||||||||||| ||||||| |||||||| Sbjct: 46749 ctccccaacgtcgcctccaaggtcctcgccaaggtcatcgaatactgcatcaagcacg 46806 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 287 ctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaagcacg 344 |||||||||||| ||||||| ||||| ||||||||||||| |||||| |||||||| Sbjct: 21331 ctccccaacgtcgcctccaaggtcctcgccaaggtcatcgaatactgcgtcaagcacg 21274
>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_B12 Length = 121362 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 287 ctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaagcacg 344 |||||||||||| ||||||| ||||| ||||||||||||| ||||||| |||||||| Sbjct: 117440 ctccccaacgtcgcctccaaggtcctcgccaaggtcatcgaatactgcatcaagcacg 117497 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 287 ctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaagcacg 344 |||||||||||| ||||||| ||||| ||||||||||||| |||||| |||||||| Sbjct: 92022 ctccccaacgtcgcctccaaggtcctcgccaaggtcatcgaatactgcgtcaagcacg 91965
>dbj|AB057428.1| Brassica juncea BjSKP1b mRNA for kinetochore protein, partial cds Length = 472 Score = 67.9 bits (34), Expect = 5e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 403 cgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcga 462 ||||||||||||| ||||||||||||||| | ||| |||| ||||| ||||||||||| Sbjct: 262 cgatgacctcaaggcctgggacgccgagttcatgaagatcgatcaagctaccctcttcga 321 Query: 463 cctcatcctg 472 ||||||||| Sbjct: 322 actcatcctg 331 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 255 tcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctct 314 |||| |||||| ||| ||||||||| ||||| || |||||||||| |||||||||| Sbjct: 120 tcgaagacgacggcgtcgacaacgggatccctcttcccaacgtcacgagcaagatcctcg 179 Query: 315 ccaaggtcatcgagtactgcaacaagcacgtc 346 | ||||| || ||||||||||| || |||||| Sbjct: 180 cgaaggtgattgagtactgcaagaaacacgtc 211
>ref|NM_001069281.1| Oryza sativa (japonica cultivar-group) Os09g0274700 (Os09g0274700) mRNA, complete cds Length = 498 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 252 tgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcc 311 |||||||||||| |||| | || |||||| |||| |||||||||||| |||||| ||| Sbjct: 122 tgatcgaggacggctgcacggagaacggcgtccctctccccaacgtcgcctccaacgtcc 181 Query: 312 tctccaaggtcatcgagtactgcaa 336 || ||||||| ||||||||||||| Sbjct: 182 tcgccaaggtgctcgagtactgcaa 206
>ref|NM_001069278.1| Oryza sativa (japonica cultivar-group) Os09g0273800 (Os09g0273800) mRNA, complete cds Length = 804 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 252 tgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcc 311 ||||||||||||||||| | || |||||| |||| |||||||||||| |||||| ||| Sbjct: 252 tgatcgaggacgactgcacggagaacggcgtccctctccccaacgtcgcctccaacgtcc 311 Query: 312 tctccaaggtcatcgagtactgcaa 336 || ||||||| |||| |||||||| Sbjct: 312 tcgccaaggtgctcgactactgcaa 336
>dbj|AK107960.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-C08, full insert sequence Length = 803 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 252 tgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcc 311 ||||||||||||||||| | || |||||| |||| |||||||||||| |||||| ||| Sbjct: 252 tgatcgaggacgactgcacggagaacggcgtccctctccccaacgtcgcctccaacgtcc 311 Query: 312 tctccaaggtcatcgagtactgcaa 336 || ||||||| |||| |||||||| Sbjct: 312 tcgccaaggtgctcgactactgcaa 336
>ref|NM_001066865.1| Oryza sativa (japonica cultivar-group) Os07g0625500 (Os07g0625500) mRNA, complete cds Length = 843 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 265 ctgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtcat 324 ||||| |||||| ||| ||||||||||||||||| ||||||||| |||| | | ||| || Sbjct: 265 ctgcgtcgacaagggcttcccgctccccaacgtcgactccaagaccctcgcgagggtgat 324 Query: 325 cgagtactgcaacaagcacg 344 | |||||||| || |||||| Sbjct: 325 ccagtactgcgacgagcacg 344
>dbj|AK064628.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-F08, full insert sequence Length = 843 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 265 ctgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtcat 324 ||||| |||||| ||| ||||||||||||||||| ||||||||| |||| | | ||| || Sbjct: 265 ctgcgtcgacaagggcttcccgctccccaacgtcgactccaagaccctcgcgagggtgat 324 Query: 325 cgagtactgcaacaagcacg 344 | |||||||| || |||||| Sbjct: 325 ccagtactgcgacgagcacg 344
>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_F05 Length = 132708 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 265 ctgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtcat 324 ||||| |||||| ||| ||||||||||||||||| ||||||||| |||| | | ||| || Sbjct: 24786 ctgcgtcgacaagggcttcccgctccccaacgtcgactccaagaccctcgcgagggtgat 24845 Query: 325 cgagtactgcaacaagcacg 344 | |||||||| || |||||| Sbjct: 24846 ccagtactgcgacgagcacg 24865 Score = 58.0 bits (29), Expect = 5e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 280 catcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaa 339 ||||||||||||||||||| ||||||||| |||| | ||||| ||| ||||||| || | Sbjct: 35423 catcccgctccccaacgtcgactccaagaccctcgcgaaggtgatcccgtactgcgacga 35482 Query: 340 gcacg 344 ||||| Sbjct: 35483 gcacg 35487 Score = 46.1 bits (23), Expect = 0.18 Identities = 44/51 (86%) Strand = Plus / Plus Query: 282 tcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtact 332 ||||||||||||||||| |||| |||| |||| ||||| |||||||||| Sbjct: 31823 tcccgctccccaacgtcgactctaagaccctcgagaaggtgatcgagtact 31873 Score = 42.1 bits (21), Expect = 2.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 280 catcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactgcaacaa 339 |||||||||||| |||||| || ||||| |||| ||||| ||||||||||| |||| Sbjct: 15190 catcccgctcccggacgtcagctacaagaccctcaagaaggtggtcgagtactgcgacaa 15249 Query: 340 gcacg 344 ||||| Sbjct: 15250 gcacg 15254
>gb|DQ245250.1| Zea mays clone 14035 mRNA sequence Length = 806 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 263 gactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtc 322 ||||||| ||||| | ||||||| || |||||||||| ||||||||||| ||||||| Sbjct: 229 gactgcgacgacagtgacatcccggtcttcaacgtcaacgccaagatcctcgacaaggtc 288 Query: 323 atcgagtactgcaacaagcacg 344 |||| |||||||| ||||||| Sbjct: 289 atcgcgtactgcaggaagcacg 310
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 255 tcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctct 314 |||||||||| ||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 72155 tcgaggacgagtgcaccgacaacggcgtccccctccccaacgtcccctccgccgtcctcg 72096 Query: 315 ccaaggtcatcgagtactgcaacaagcacg 344 ||||||| |||||||||||| | |||||| Sbjct: 72095 ccaaggtgctcgagtactgcagcgagcacg 72066
>emb|AM111343.1| Plantago major partial mRNA for fimbriata-associated protein (fap1 gene) Length = 651 Score = 58.0 bits (29), Expect = 5e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 308 atcctctccaaggtcatcgagtactgcaa 336 ||||||||||||||||||||||||||||| Sbjct: 88 atcctctccaaggtcatcgagtactgcaa 116
>gb|DQ245282.1| Zea mays clone 14289 mRNA sequence Length = 769 Score = 54.0 bits (27), Expect = 7e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 308 atcctctccaaggtcatcgagtactgcaacaagcacgtc 346 |||||| ||||||| |||||||||||||| ||||||||| Sbjct: 230 atcctcgccaaggttatcgagtactgcaagaagcacgtc 268
>ref|NM_001063134.1| Oryza sativa (japonica cultivar-group) Os06g0113800 (Os06g0113800) mRNA, complete cds Length = 542 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 310 cctctccaaggtcatcgagtactgcaacaagcacg 344 |||| ||||||||||||||||||||| |||||||| Sbjct: 212 cctcgccaaggtcatcgagtactgcaccaagcacg 246
>gb|AY600991.1| Oryza sativa (japonica cultivar-group) skp1-like protein (osk2) mRNA, complete cds Length = 566 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 310 cctctccaaggtcatcgagtactgcaacaagcacg 344 |||| ||||||||||||||||||||| |||||||| Sbjct: 236 cctcgccaaggtcatcgagtactgcaccaagcacg 270
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 310 cctctccaaggtcatcgagtactgcaacaagcacg 344 |||||||||| ||||||||||||||| |||||||| Sbjct: 782025 cctctccaagatcatcgagtactgcaccaagcacg 781991 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 310 cctctccaaggtcatcgagtactgcaacaagcacg 344 |||| ||||||||||||||||||||| |||||||| Sbjct: 786194 cctcgccaaggtcatcgagtactgcaccaagcacg 786160
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 310 cctctccaaggtcatcgagtactgcaacaagcacg 344 |||||||||| ||||||||||||||| |||||||| Sbjct: 65159 cctctccaagatcatcgagtactgcaccaagcacg 65125 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 310 cctctccaaggtcatcgagtactgcaacaagcacg 344 |||| ||||||||||||||||||||| |||||||| Sbjct: 69328 cctcgccaaggtcatcgagtactgcaccaagcacg 69294
>gb|DQ245000.1| Zea mays clone 12107 mRNA sequence Length = 812 Score = 52.0 bits (26), Expect = 0.003 Identities = 68/82 (82%) Strand = Plus / Plus Query: 263 gactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtc 322 ||||||| ||||| | ||||||| || |||||||||| |||| |||||| ||||||| Sbjct: 230 gactgcgacgacagtgacatcccggtcttcaacgtcaacgccaatatcctcgacaaggtc 289 Query: 323 atcgagtactgcaacaagcacg 344 |||| |||||||| ||||||| Sbjct: 290 atcgcgtactgcaggaagcacg 311
>gb|AC189492.1| Brassica rapa subsp. pekinensis clone KBrB084M08, complete sequence Length = 129722 Score = 50.1 bits (25), Expect = 0.011 Identities = 28/29 (96%) Strand = Plus / Plus Query: 410 ctcaagaattgggacgccgagttcgtcaa 438 ||||||||||||||| ||||||||||||| Sbjct: 65391 ctcaagaattgggactccgagttcgtcaa 65419
>ref|NM_128129.2| Arabidopsis thaliana ASK3; protein binding / ubiquitin-protein ligase (ASK3) mRNA, complete cds Length = 734 Score = 50.1 bits (25), Expect = 0.011 Identities = 64/77 (83%) Strand = Plus / Plus Query: 203 ttcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggac 262 |||||||| ||||| || ||||| |||||||| ||||| || ||| ||||||||||| Sbjct: 127 ttcgaggtcgaggaagccgtcgcggtcgagtcccagacgattaagcacatgatcgaggac 186 Query: 263 gactgcgccgacaacgg 279 ||||||| ||| ||||| Sbjct: 187 gactgcgtcgataacgg 203
>gb|AY139806.1| Arabidopsis thaliana At2g25700/F3N11.15 mRNA, complete cds Length = 492 Score = 50.1 bits (25), Expect = 0.011 Identities = 64/77 (83%) Strand = Plus / Plus Query: 203 ttcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggac 262 |||||||| ||||| || ||||| |||||||| ||||| || ||| ||||||||||| Sbjct: 52 ttcgaggtcgaggaagccgtcgcggtcgagtcccagacgattaagcacatgatcgaggac 111 Query: 263 gactgcgccgacaacgg 279 ||||||| ||| ||||| Sbjct: 112 gactgcgtcgataacgg 128
>gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map B68, complete sequence Length = 100745 Score = 50.1 bits (25), Expect = 0.011 Identities = 64/77 (83%) Strand = Plus / Minus Query: 203 ttcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggac 262 |||||||| ||||| || ||||| |||||||| ||||| || ||| ||||||||||| Sbjct: 66464 ttcgaggtcgaggaagccgtcgcggtcgagtcccagacgattaagcacatgatcgaggac 66405 Query: 263 gactgcgccgacaacgg 279 ||||||| ||| ||||| Sbjct: 66404 gactgcgtcgataacgg 66388
>gb|AY052700.1| Arabidopsis thaliana At2g25700/F3N11.15 mRNA, complete cds Length = 735 Score = 50.1 bits (25), Expect = 0.011 Identities = 64/77 (83%) Strand = Plus / Plus Query: 203 ttcgaggtggaggaggcggtcgccgtcgagtcgcagaccatccgccacctgatcgaggac 262 |||||||| ||||| || ||||| |||||||| ||||| || ||| ||||||||||| Sbjct: 127 ttcgaggtcgaggaagccgtcgcggtcgagtcccagacgattaagcacatgatcgaggac 186 Query: 263 gactgcgccgacaacgg 279 ||||||| ||| ||||| Sbjct: 187 gactgcgtcgataacgg 203
>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0058E19, complete sequence Length = 147706 Score = 48.1 bits (24), Expect = 0.045 Identities = 53/63 (84%), Gaps = 6/63 (9%) Strand = Plus / Plus Query: 407 gacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctc 466 ||||||||||| | ||||||||| ||||||||| || |||||||||||||||||| Sbjct: 48479 gacctcaagaacttggacgccgacttcgtcaag------caggccaccctcttcgacctc 48532 Query: 467 atc 469 ||| Sbjct: 48533 atc 48535
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 48.1 bits (24), Expect = 0.045 Identities = 53/63 (84%), Gaps = 6/63 (9%) Strand = Plus / Minus Query: 407 gacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctc 466 ||||||||||| | ||||||||| ||||||||| || |||||||||||||||||| Sbjct: 10632372 gacctcaagaacttggacgccgacttcgtcaag------caggccaccctcttcgacctc 10632319 Query: 467 atc 469 ||| Sbjct: 10632318 atc 10632316
>ref|NM_001069277.1| Oryza sativa (japonica cultivar-group) Os09g0272900 (Os09g0272900) mRNA, complete cds Length = 3898 Score = 46.1 bits (23), Expect = 0.18 Identities = 59/71 (83%) Strand = Plus / Plus Query: 274 caacggcatcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactg 333 |||||||||||| |||||||||||| | | | ||||| ||||||| |||||||||| Sbjct: 3329 caacggcatccctctccccaacgtcgccggcgacgtcctcgccaaggtggtcgagtactg 3388 Query: 334 caacaagcacg 344 || |||||||| Sbjct: 3389 caccaagcacg 3399
>ref|NM_001066866.1| Oryza sativa (japonica cultivar-group) Os07g0625600 (Os07g0625600) mRNA, complete cds Length = 537 Score = 46.1 bits (23), Expect = 0.18 Identities = 44/51 (86%) Strand = Plus / Plus Query: 282 tcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtact 332 ||||||||||||||||| |||| |||| |||| ||||| |||||||||| Sbjct: 194 tcccgctccccaacgtcgactctaagaccctcgagaaggtgatcgagtact 244
>gb|AC161107.24| Medicago truncatula clone mth2-192o12, complete sequence Length = 106909 Score = 46.1 bits (23), Expect = 0.18 Identities = 35/39 (89%) Strand = Plus / Minus Query: 431 ttcgtcaaggtcgaccaagccaccctcttcgacctcatc 469 ||||||||||| ||||||| ||||||||||| |||||| Sbjct: 90735 ttcgtcaaggttgaccaagataccctcttcgatctcatc 90697
>gb|AY280635.1| Uncultured bacterium clone pbiow genomic region, partial sequence Length = 30796 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Minus Query: 349 ggccaagcccgccgacgccgccg 371 ||||||||||||||||||||||| Sbjct: 15780 ggccaagcccgccgacgccgccg 15758
>dbj|AP005788.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515A04 Length = 146160 Score = 46.1 bits (23), Expect = 0.18 Identities = 59/71 (83%) Strand = Plus / Minus Query: 274 caacggcatcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactg 333 |||||||||||| |||||||||||| | | | ||||| ||||||| |||||||||| Sbjct: 101215 caacggcatccctctccccaacgtcgccggcgacgtcctcgccaaggtggtcgagtactg 101156 Query: 334 caacaagcacg 344 || |||||||| Sbjct: 101155 caccaagcacg 101145
>dbj|AK111610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100B16, full insert sequence Length = 3899 Score = 46.1 bits (23), Expect = 0.18 Identities = 59/71 (83%) Strand = Plus / Plus Query: 274 caacggcatcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactg 333 |||||||||||| |||||||||||| | | | ||||| ||||||| |||||||||| Sbjct: 3330 caacggcatccctctccccaacgtcgccggcgacgtcctcgccaaggtggtcgagtactg 3389 Query: 334 caacaagcacg 344 || |||||||| Sbjct: 3390 caccaagcacg 3400
>dbj|AK111519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H13, full insert sequence Length = 2619 Score = 46.1 bits (23), Expect = 0.18 Identities = 59/71 (83%) Strand = Plus / Plus Query: 274 caacggcatcccgctccccaacgtcaactccaagatcctctccaaggtcatcgagtactg 333 |||||||||||| |||||||||||| | | | ||||| ||||||| |||||||||| Sbjct: 2179 caacggcatccctctccccaacgtcgccggcgacgtcctcgccaaggtggtcgagtactg 2238 Query: 334 caacaagcacg 344 || |||||||| Sbjct: 2239 caccaagcacg 2249
>emb|CR855168.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0112G12, complete sequence Length = 103646 Score = 44.1 bits (22), Expect = 0.70 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 gatccccgatccgcccgccccc 120 |||||||||||||||||||||| Sbjct: 40519 gatccccgatccgcccgccccc 40498
>ref|XM_794074.2| PREDICTED: Strongylocentrotus purpuratus similar to skp1 (LOC594639), partial mRNA Length = 741 Score = 44.1 bits (22), Expect = 0.70 Identities = 25/26 (96%) Strand = Plus / Plus Query: 280 catcccgctccccaacgtcaactcca 305 |||||| ||||||||||||||||||| Sbjct: 32 catccctctccccaacgtcaactcca 57
>ref|XM_001192003.1| PREDICTED: Strongylocentrotus purpuratus similar to skp1 (LOC594639), partial mRNA Length = 741 Score = 44.1 bits (22), Expect = 0.70 Identities = 25/26 (96%) Strand = Plus / Plus Query: 280 catcccgctccccaacgtcaactcca 305 |||||| ||||||||||||||||||| Sbjct: 32 catccctctccccaacgtcaactcca 57
>gb|DQ068109.1| Brassica napus isolate mutant Cr3529 clone Bncr1 unknown mRNA Length = 467 Score = 44.1 bits (22), Expect = 0.70 Identities = 58/70 (82%) Strand = Plus / Plus Query: 403 cgatgacctcaagaattgggacgccgagttcgtcaaggtcgaccaagccaccctcttcga 462 ||||||||||||| |||||| || ||||| | ||| |||| ||||| |||||||| || Sbjct: 68 cgatgacctcaaggcttgggatgctgagtttatgaagatcgatcaagctaccctctttga 127 Query: 463 cctcatcctg 472 ||||||||| Sbjct: 128 gctcatcctg 137
>gb|AF494084.1| Nicotiana benthamiana SKP1 mRNA, complete cds Length = 462 Score = 44.1 bits (22), Expect = 0.70 Identities = 31/34 (91%) Strand = Plus / Plus Query: 252 tgatcgaggacgactgcgccgacaacggcatccc 285 ||||||| |||||||||||||||| | ||||||| Sbjct: 89 tgatcgaagacgactgcgccgacaccagcatccc 122
>gb|DQ066256.1| Ixodes scapularis isolate ISN-L-169 SCF ubiquitin ligase complex mRNA, complete cds Length = 489 Score = 44.1 bits (22), Expect = 0.70 Identities = 43/50 (86%) Strand = Plus / Plus Query: 419 tgggacgccgagttcgtcaaggtcgaccaagccaccctcttcgacctcat 468 ||||||||||| ||| ||||||| ||||| | |||||| ||||| ||||| Sbjct: 259 tgggacgccgacttcctcaaggtggaccagggcaccctgttcgagctcat 308
>gb|AF070967.1|AF070967 Nicotiana clevelandii SKP1-like protein mRNA, complete cds Length = 769 Score = 44.1 bits (22), Expect = 0.70 Identities = 31/34 (91%) Strand = Plus / Plus Query: 252 tgatcgaggacgactgcgccgacaacggcatccc 285 ||||||| |||||||||||||||| | ||||||| Sbjct: 125 tgatcgaagacgactgcgccgacaccagcatccc 158
>gb|DQ653099.1| Arabidopsis thaliana clone 0000012191_0000008855 unknown mRNA Length = 462 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 atcgagtactgcaacaagcac 343 ||||||||||||||||||||| Sbjct: 169 atcgagtactgcaacaagcac 189
>emb|CT830664.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103M20, full insert sequence Length = 1090 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cgccgacgccgccggagctgg 378 ||||||||||||||||||||| Sbjct: 704 cgccgacgccgccggagctgg 724
>emb|CT834259.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA044D20, full insert sequence Length = 962 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cgccgacgccgccggagctgg 378 ||||||||||||||||||||| Sbjct: 231 cgccgacgccgccggagctgg 251
>ref|NM_001068207.1| Oryza sativa (japonica cultivar-group) Os08g0375700 (Os08g0375700) mRNA, complete cds Length = 729 Score = 42.1 bits (21), Expect = 2.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 247 ccacctgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 299 |||| |||||||||| |||||| ||||||| || | || ||||||||||||| Sbjct: 168 ccacatgatcgaggatgactgcaccgacaatggggttcccctccccaacgtca 220
>ref|NM_001056425.1| Oryza sativa (japonica cultivar-group) Os03g0306800 (Os03g0306800) mRNA, complete cds Length = 622 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cgccgacgccgccggagctgg 378 ||||||||||||||||||||| Sbjct: 207 cgccgacgccgccggagctgg 227
>ref|XM_001082280.1| PREDICTED: Macaca mulatta similar to ADAM metallopeptidase with thrombospondin type 1 motif, 17 preproprotein, transcript variant 2 (LOC693447), mRNA Length = 3448 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 203 ttcgaggtggaggaggcggtcgccg 227 ||||||||||||||||||| ||||| Sbjct: 342 ttcgaggtggaggaggcgggcgccg 366
>gb|CP000376.1| Silicibacter sp. TM1040 mega plasmid, complete sequence Length = 821788 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 120 cagcccggatccaggcgatggcggc 144 ||||||||||| ||||||||||||| Sbjct: 478848 cagcccggatcgaggcgatggcggc 478824
>gb|DQ446683.1| Arabidopsis thaliana clone pENTR221-At3g21850 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3g21850) mRNA, complete cds Length = 462 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 atcgagtactgcaacaagcac 343 ||||||||||||||||||||| Sbjct: 169 atcgagtactgcaacaagcac 189
>ref|NM_113081.1| Arabidopsis thaliana ASK10; ubiquitin-protein ligase (ASK10) mRNA, complete cds Length = 459 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 atcgagtactgcaacaagcac 343 ||||||||||||||||||||| Sbjct: 166 atcgagtactgcaacaagcac 186
>ref|NM_113079.2| Arabidopsis thaliana ASK7; ubiquitin-protein ligase (ASK7) mRNA, complete cds Length = 709 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 atcgagtactgcaacaagcac 343 ||||||||||||||||||||| Sbjct: 235 atcgagtactgcaacaagcac 255
>ref|NM_113080.1| Arabidopsis thaliana ASK9 (ARABIDOPSIS SKP1-LIKE 9); ubiquitin-protein ligase (ASK9) mRNA, complete cds Length = 462 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 atcgagtactgcaacaagcac 343 ||||||||||||||||||||| Sbjct: 169 atcgagtactgcaacaagcac 189
>ref|NM_113078.1| Arabidopsis thaliana ASK8; ubiquitin-protein ligase (ASK8) mRNA, complete cds Length = 459 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 atcgagtactgcaacaagcac 343 ||||||||||||||||||||| Sbjct: 166 atcgagtactgcaacaagcac 186
>gb|AY702087.1| Nicotiana tabacum cultivar Samsun NN SKP1 (SKP1) mRNA, complete cds Length = 653 Score = 42.1 bits (21), Expect = 2.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 182 aagagctcggacggggaggaattcgaggtggaggaggcggt 222 |||||||||||||| ||| |||||||||||||| ||||| Sbjct: 100 aagagctcggacggcgagactttcgaggtggaggaagcggt 140
>gb|AY600992.1| Oryza sativa (japonica cultivar-group) skp1-like protein (osk3) mRNA, complete cds Length = 626 Score = 42.1 bits (21), Expect = 2.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 247 ccacctgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 299 |||| |||||||||| |||||| ||||||| || | || ||||||||||||| Sbjct: 126 ccacatgatcgaggatgactgcaccgacaatggggttcccctccccaacgtca 178
>gb|AY961948.1| Picea abies SCF ubiquitin ligase (SCF E3) mRNA, complete cds Length = 874 Score = 42.1 bits (21), Expect = 2.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 304 caagatcctctccaaggtcatcgagtactgcaa 336 |||||| ||||| ||||||||||| |||||||| Sbjct: 283 caagatactctctaaggtcatcgaatactgcaa 315
>gb|AC104846.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0004C07, complete sequence Length = 135425 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 650 agttgtgttacagacttacag 670 ||||||||||||||||||||| Sbjct: 41385 agttgtgttacagacttacag 41365
>gb|AY336992.1| Oryza sativa (japonica cultivar-group) SKP1 mRNA, complete cds Length = 751 Score = 42.1 bits (21), Expect = 2.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 247 ccacctgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 299 |||| |||||||||| |||||| ||||||| || | || ||||||||||||| Sbjct: 168 ccacatgatcgaggatgactgcaccgacaatggggttcccctccccaacgtca 220
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 ggatccaggcgatggcggccg 146 ||||||||||||||||||||| Sbjct: 2310727 ggatccaggcgatggcggccg 2310707
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 cgccgacgccgccggagctgg 378 ||||||||||||||||||||| Sbjct: 98468 cgccgacgccgccggagctgg 98448
>gb|DQ056602.1| Arabidopsis thaliana E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3g21860) mRNA, complete cds Length = 459 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 atcgagtactgcaacaagcac 343 ||||||||||||||||||||| Sbjct: 166 atcgagtactgcaacaagcac 186
>gb|DQ056601.1| Arabidopsis thaliana putative E3 ubiquitin ligase SCF complex subunit SKP1/ASK (At3g21830) mRNA, complete cds Length = 459 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 atcgagtactgcaacaagcac 343 ||||||||||||||||||||| Sbjct: 166 atcgagtactgcaacaagcac 186
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 650 agttgtgttacagacttacag 670 ||||||||||||||||||||| Sbjct: 24440294 agttgtgttacagacttacag 24440274
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 2.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 247 ccacctgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 299 |||| |||||||||| |||||| ||||||| || | || ||||||||||||| Sbjct: 17618140 ccacatgatcgaggatgactgcaccgacaatggggttcccctccccaacgtca 17618192
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cgccgacgccgccggagctgg 378 ||||||||||||||||||||| Sbjct: 10880662 cgccgacgccgccggagctgg 10880682
>gb|AC093597.3| Homo sapiens BAC clone RP11-187O17 from 4, complete sequence Length = 17211 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 ccaagatcctctccaaggtca 323 ||||||||||||||||||||| Sbjct: 5568 ccaagatcctctccaaggtca 5588
>emb|AL161457.13| Human DNA sequence from clone RP11-88I18 on chromosome 9 Contains part of the PGM5 gene for phosphoglucomutase 5 and 2 novel genes, complete sequence Length = 124388 Score = 42.1 bits (21), Expect = 2.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 652 ttgtgttacagacttacagtcacttctga 680 ||||||||||||||| |||||||| |||| Sbjct: 75285 ttgtgttacagacttgcagtcactactga 75257
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 ccaagcccgccgacgccgccg 371 ||||||||||||||||||||| Sbjct: 8157058 ccaagcccgccgacgccgccg 8157078
>emb|Y14856.1|AMFAP1 Antirrhinum majus mRNA for fimbriata-associated protein 1, partial Length = 486 Score = 42.1 bits (21), Expect = 2.7 Identities = 69/85 (81%) Strand = Plus / Plus Query: 252 tgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatcc 311 ||||||||||||| || ||||| |||| || || ||||| ||||||| | ||| |||| Sbjct: 95 tgatcgaggacgattgtgccgataacgttattcccctcccaaacgtcaccggcaaaatcc 154 Query: 312 tctccaaggtcatcgagtactgcaa 336 |||| || || ||||| |||||||| Sbjct: 155 tctcgaaagtgatcgaatactgcaa 179
>dbj|AB025634.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSD21 Length = 59793 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 atcgagtactgcaacaagcac 343 ||||||||||||||||||||| Sbjct: 50656 atcgagtactgcaacaagcac 50636 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 atcgagtactgcaacaagcac 343 ||||||||||||||||||||| Sbjct: 52584 atcgagtactgcaacaagcac 52564 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 atcgagtactgcaacaagcac 343 ||||||||||||||||||||| Sbjct: 54264 atcgagtactgcaacaagcac 54244 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 atcgagtactgcaacaagcac 343 ||||||||||||||||||||| Sbjct: 56952 atcgagtactgcaacaagcac 56932
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 42.1 bits (21), Expect = 2.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 247 ccacctgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 299 |||| |||||||||| |||||| ||||||| || | || ||||||||||||| Sbjct: 94790 ccacatgatcgaggatgactgcaccgacaatggggttcccctccccaacgtca 94842
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 42.1 bits (21), Expect = 2.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 247 ccacctgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtca 299 |||| |||||||||| |||||| ||||||| || | || ||||||||||||| Sbjct: 3529 ccacatgatcgaggatgactgcaccgacaatggggttcccctccccaacgtca 3581
>dbj|AK103722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138B13, full insert sequence Length = 623 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cgccgacgccgccggagctgg 378 ||||||||||||||||||||| Sbjct: 208 cgccgacgccgccggagctgg 228
>gb|AY107728.1| Zea mays PCO148914 mRNA sequence Length = 538 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 348 aggccaagcccgccgacgccg 368 ||||||||||||||||||||| Sbjct: 428 aggccaagcccgccgacgccg 408 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 98,495,598 Number of extensions: 5277321 Number of successful extensions: 113235 Number of sequences better than 10.0: 109 Number of HSP's gapped: 113228 Number of HSP's successfully gapped: 167 Length of query: 733 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 711 Effective length of database: 18,508,616,841 Effective search space: 13159626573951 Effective search space used: 13159626573951 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
