ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf3m14 |
|---|---|
| Clone Library Name | barley_pub |
>P04399:RIP2_HORVU Protein synthesis inhibitor II - Hordeum vulgare (Barley)| Length = 280 Score = 46.6 bits (109), Expect(2) = 4e-10 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 2/86 (2%) Frame = +2 Query: 14 MENPAFTAELDVTRGSS-YGSFVSGVRDQLVLHAGATRHLELVLLPPQAEDPRKAPWFGV 190 ++ P FTA +V S+ Y +F++G+R++L A + H E VL P + P + WF V Sbjct: 8 VDKPLFTATFNVQASSADYATFIAGIRNKLRNPAHFS-HNEPVLPPVEPNVP-PSRWFHV 65 Query: 191 TLRCGSGQPAL-LRIRADNIYLCGYR 265 L+ L L IRADNIYL G++ Sbjct: 66 VLKASPTSAGLTLAIRADNIYLEGFK 91 Score = 39.3 bits (90), Expect(2) = 4e-10 Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 9/140 (6%) Frame = +1 Query: 271 GRLWSEFPGCSLIAGATPLPFGDSY----GAMARVAETAL--ESXXXXXXXXXXXXXXXX 432 G W PG LI GAT + FG +Y G ++ AL + Sbjct: 95 GTWWELTPG--LIPGATYVGFGGTYRDLLGDTDKLTNVALGRQQLEDAVTALHGRTKADK 152 Query: 433 XXXGTQQEIARSLMTMSVMVSEAIRFRSVGG---ALGHMMCNAARRGVLPTHMVDQVKNW 603 QQ+ ++ T+ +MV+EA RF++V G L H + G + M QV W Sbjct: 153 ASGPKQQQAREAVTTLLLMVNEATRFQTVSGFVAGLLHPKAVEKKSGKIGNEMKAQVNGW 212 Query: 604 SSLSEYWLGAVLYGQPSPRP 663 LS L + P P Sbjct: 213 QDLSAALLKTDVKPPPGKSP 232
>P22244:RIP1_HORVU Protein synthesis inhibitor I - Hordeum vulgare (Barley)| Length = 281 Score = 46.2 bits (108), Expect(2) = 5e-10 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Frame = +2 Query: 14 MENPAFTAELDVTRGSS-YGSFVSGVRDQLVLHAGATRHLELVLLPPQAEDPRKAPWFGV 190 ++ P FTA +V S+ Y +F++G+R++L A + + + LPP + + WF V Sbjct: 9 VDKPLFTATFNVQASSADYATFIAGIRNKLRNPAHFSHNRPV--LPPVEPNVPPSRWFHV 66 Query: 191 TLRCGSGQPAL-LRIRADNIYLCGYR 265 L+ L L IRADNIYL G++ Sbjct: 67 VLKASPTSAGLTLAIRADNIYLEGFK 92 Score = 39.3 bits (90), Expect(2) = 5e-10 Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 9/140 (6%) Frame = +1 Query: 271 GRLWSEFPGCSLIAGATPLPFGDSY----GAMARVAETAL--ESXXXXXXXXXXXXXXXX 432 G W PG LI GAT + FG +Y G ++ AL + Sbjct: 96 GTWWELTPG--LIPGATYVGFGGTYRDLLGDTDKLTNVALGRQQLADAVTALHGRTKADK 153 Query: 433 XXXGTQQEIARSLMTMSVMVSEAIRFRSVGG---ALGHMMCNAARRGVLPTHMVDQVKNW 603 QQ+ ++ T+ +MV+EA RF++V G L H + G + M QV W Sbjct: 154 PSGPKQQQAREAVTTLLLMVNEATRFQTVSGFVAGLLHPKAVEKKSGKIGNEMKAQVNGW 213 Query: 604 SSLSEYWLGAVLYGQPSPRP 663 LS L + P P Sbjct: 214 QDLSAALLKTDVKPPPGKSP 233
>P74476:RF2_SYNY3 Peptide chain release factor 2 - Synechocystis sp. (strain PCC 6803)| Length = 372 Score = 52.8 bits (125), Expect = 3e-06 Identities = 30/81 (37%), Positives = 41/81 (50%) Frame = -2 Query: 1144 TGERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELV 965 T ERS NK KA++ LKAKLLI+ E R + VE + R Y P +LV Sbjct: 277 TQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRGDMVEAAWGTQIRNYVFHPYQLV 336 Query: 964 HDLNTGIQLSDLNSVQHNTLT 902 DL T ++ +D+ V L+ Sbjct: 337 KDLRTNVETTDVGGVMDGELS 357
>O67695:RF2_AQUAE Peptide chain release factor 2 - Aquifex aeolicus| Length = 373 Score = 44.7 bits (104), Expect = 9e-04 Identities = 24/73 (32%), Positives = 37/73 (50%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS + NK KA+ LKAKL + + K E + + G + R Y P +L+ D Sbjct: 275 ERSQYQNKRKALELLKAKLYQLEMKKLEEKKKQYEGEKTDIGWGHQIRSYVFHPYKLIKD 334 Query: 958 LNTGIQLSDLNSV 920 L TG + ++ +V Sbjct: 335 LRTGYETGNVEAV 347
>P28522:RIPX_MAIZE Ribosome-inactivating protein precursor - Zea mays (Maize)| Length = 301 Score = 38.5 bits (88), Expect = 0.062 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%) Frame = +2 Query: 23 PAFTAELDVTRGS-SYGSFVSGVRDQLVLHAGATRHLELVLLPPQAEDPRKAPWFGVTLR 199 P FT V + Y +F++ VR ++ H + + +LPP+ + P WF L+ Sbjct: 21 PKFTEIFPVEDANYPYSAFIASVRKDVIKHCTDHKGIFQPVLPPEKKVPEL--WFYTELK 78 Query: 200 CGSGQPALLRIRADNIYLCGYR 265 + L IR DN+YL G+R Sbjct: 79 TRTSS-ITLAIRMDNLYLVGFR 99
>P25892:RIP9_MAIZE Ribosome-inactivating protein 9 - Zea mays (Maize)| Length = 304 Score = 38.1 bits (87), Expect = 0.080 Identities = 21/67 (31%), Positives = 35/67 (52%) Frame = +2 Query: 65 YGSFVSGVRDQLVLHAGATRHLELVLLPPQAEDPRKAPWFGVTLRCGSGQPALLRIRADN 244 Y +F++ VR ++ H + + +LPP+ + P WF L+ + L IR DN Sbjct: 36 YSAFIASVRKDVIKHCTDHKGIFQPVLPPEKKVPEL--WFYTELKTRTSS-ITLAIRMDN 92 Query: 245 IYLCGYR 265 +YL G+R Sbjct: 93 LYLVGFR 99
>P10593:ALB3_MAIZE Albumin b-32 - Zea mays (Maize)| Length = 303 Score = 38.1 bits (87), Expect = 0.080 Identities = 21/67 (31%), Positives = 35/67 (52%) Frame = +2 Query: 65 YGSFVSGVRDQLVLHAGATRHLELVLLPPQAEDPRKAPWFGVTLRCGSGQPALLRIRADN 244 Y +F++ VR ++ H + + +LPP+ + P WF L+ + L IR DN Sbjct: 36 YSAFIASVRKDVIKHCTDHKGIFQPVLPPEKKVPEL--WFYTELKTRTSS-ITLAIRMDN 92 Query: 245 IYLCGYR 265 +YL G+R Sbjct: 93 LYLVGFR 99
>Q2SL95:RF1_HAHCH Peptide chain release factor 1 - Hahella chejuensis (strain KCTC| 2396) Length = 360 Score = 36.6 bits (83), Expect = 0.23 Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 4/94 (4%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS N+ KA+S LKAKLL +E + + K V G E R PQ + D Sbjct: 262 ERSQHKNRAKAMSLLKAKLLSSAQEKQAKEQAQTRKSLVGSGDRSERIRTYNYPQGRITD 321 Query: 958 LNTGIQLSDLNSVQHNTL----TARLIMYQMQML 869 + L L V L L YQ +ML Sbjct: 322 HRINLTLYKLEEVVQGDLDPVIQPLLQEYQAEML 355
>Q3AB98:IF2_CARHZ Translation initiation factor IF-2 - Carboxydothermus| hydrogenoformans (strain Z-2901 / DSM 6008) Length = 827 Score = 36.6 bits (83), Expect = 0.23 Identities = 17/58 (29%), Positives = 37/58 (63%) Frame = -1 Query: 1169 LNVLGWSLHR*KKLFRKQAKSREQVESEATHHNKRTKSTRPEDDGETSRGGRMQPRDE 996 LN+L +L+R K+ K+ + ++QVE +A ++ RP++ ++ +GG+ +PR++ Sbjct: 43 LNLLLKALNREKEEKEKKEQEKKQVEQKAEAQKLQSHPQRPKEQQQSKQGGQSRPREQ 100
>P25891:RIP3_MAIZE Ribosome-inactivating protein 3 - Zea mays (Maize)| Length = 300 Score = 36.2 bits (82), Expect = 0.31 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Frame = +2 Query: 23 PAFTAELDVTRGS-SYGSFVSGVRDQLVLHAGATRHLELVLLPPQAEDPRKAPWFGVTLR 199 P FT V + Y +F++ VR ++ H + + +LPP+ + P W L+ Sbjct: 21 PKFTEIFPVEDANYPYSAFIASVRKDVIKHCTDHKGIFQPVLPPEKKVPEL--WLYTELK 78 Query: 200 CGSGQPALLRIRADNIYLCGYR 265 + L IR DN+YL G+R Sbjct: 79 TRTSS-ITLAIRMDNLYLVGFR 99
>O84026:RF1_CHLTR Peptide chain release factor 1 - Chlamydia trachomatis| Length = 359 Score = 35.8 bits (81), Expect = 0.40 Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 3/94 (3%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS NK KA+ LKA++ + R + M V G E R PQ V D Sbjct: 260 ERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSAQVGSGDRSERIRTYNFPQNRVTD 319 Query: 958 LNTGIQLSDLNSVQHNTL---TARLIMYQMQMLF 866 G+ L +L+ V L T L+ + + LF Sbjct: 320 HRIGLTLYNLDRVMEGELDMITTALVTHVHRQLF 353
>Q3KMZ9:RF1_CHLTA Peptide chain release factor 1 - Chlamydia trachomatis (strain| A/HAR-13 / ATCC VR-571B) Length = 359 Score = 35.8 bits (81), Expect = 0.40 Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 3/94 (3%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS NK KA+ LKA++ + R + M V G E R PQ V D Sbjct: 260 ERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSAQVGSGDRSERIRTYNFPQNRVTD 319 Query: 958 LNTGIQLSDLNSVQHNTL---TARLIMYQMQMLF 866 G+ L +L+ V L T L+ + + LF Sbjct: 320 HRIGLTLYNLDRVMEGELDMITTALVTHVHRQLF 353
>Q9X1R5:RF2_THEMA Peptide chain release factor 2 - Thermotoga maritima| Length = 369 Score = 35.4 bits (80), Expect = 0.52 Identities = 20/73 (27%), Positives = 38/73 (52%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS NK A+ LKAKL + E + + + ++ + + + R Y P +V D Sbjct: 276 ERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQGELKDISWGNQIRSYIFHPYTMVKD 335 Query: 958 LNTGIQLSDLNSV 920 TG++ +++++V Sbjct: 336 HRTGVETANVDAV 348
>Q9PL16:RF1_CHLMU Peptide chain release factor 1 - Chlamydia muridarum| Length = 359 Score = 35.4 bits (80), Expect = 0.52 Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 3/94 (3%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS NK KA+ LKA++ + R + M V G E R PQ V D Sbjct: 260 ERSQHKNKAKAMRVLKARIRDAEVQKREQEASAMRSAQVGSGDRSERIRTYNFPQNRVTD 319 Query: 958 LNTGIQLSDLNSVQHNTL---TARLIMYQMQMLF 866 G+ L +L+ V L T L+ + + LF Sbjct: 320 HRIGLTLYNLDRVMQGELDMITTALVSHAHRQLF 353
>Q255B5:RF1_CHLFF Peptide chain release factor 1 - Chlamydophila felis (strain Fe/C-56)| Length = 361 Score = 35.4 bits (80), Expect = 0.52 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 3/94 (3%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS NK KA+ LKA++ + R + M V G E R Q V D Sbjct: 260 ERSQHKNKAKAMRILKARIRDAEMQRRHKEASAMRSAQVGSGDRSERIRTYNFSQNRVTD 319 Query: 958 LNTGIQLSDLNSVQH---NTLTARLIMYQMQMLF 866 G+ L +L+ V +T+T+ L+ + LF Sbjct: 320 HRIGLTLYNLDKVMEGDLDTITSALVSHAYHQLF 353
>Q5YR52:RF2_NOCFA Peptide chain release factor 2 - Nocardia farcinica| Length = 372 Score = 35.0 bits (79), Expect = 0.68 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCN--RETRRYTLGPQELV 965 E+S NK+ A+ L+AKLL R + M+ EG + + R Y L P ++V Sbjct: 278 EKSQLQNKISAMRVLQAKLL---ERKRQEERAEMDALKTNEGASWGNQMRSYVLHPYQMV 334 Query: 964 HDLNTGIQLSDLNSV 920 DL T ++++ ++V Sbjct: 335 KDLRTNYEVNNPSAV 349
>Q00973:B4GN1_HUMAN Beta-1,4 N-acetylgalactosaminyltransferase 1 - Homo sapiens (Human)| Length = 533 Score = 34.3 bits (77), Expect = 1.2 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Frame = +1 Query: 148 SPGRGSPQGPMVRRHAPVRLRAAGAAPHTRRQHLPLRLPE--LGRLWSEFPGCSLIAGAT 321 +PG P P +P R AP R H+P+R+ E +G L C G Sbjct: 30 APGLRLPLAPWAPPQSPRRPELPDLAPEPRYAHIPVRIKEQVVGLLAWNNCSCESSGGGL 89 Query: 322 PLPF 333 PLPF Sbjct: 90 PLPF 93
>P28367:RF2_BACSU Peptide chain release factor 2 - Bacillus subtilis| Length = 366 Score = 32.7 bits (73), Expect = 3.4 Identities = 21/85 (24%), Positives = 37/85 (43%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS N+ +A+ LKAKL E + + + + E G + R Y P +V D Sbjct: 276 ERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKD 335 Query: 958 LNTGIQLSDLNSVQHNTLTARLIMY 884 T ++ ++ +V + + Y Sbjct: 336 HRTNTEMGNVQAVMDGDIDTFIDAY 360
>Q49Z65:RF1_STAS1 Peptide chain release factor 1 - Staphylococcus saprophyticus subsp.| saprophyticus (strain ATCC 15305 / DSM 20229) Length = 358 Score = 32.7 bits (73), Expect = 3.4 Identities = 29/98 (29%), Positives = 40/98 (40%) Frame = -2 Query: 1198 AGRNPHIAAG*MYWVGLSTGERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVE 1019 A R HI G V ++ E+S N+ KA+ LKA+L + + K AV Sbjct: 241 AVRITHIPTG----VIATSSEKSQIQNREKALKVLKARLFDMKLQEEQQKYAAQRKSAVG 296 Query: 1018 EGCNRETRRYTLGPQELVHDLNTGIQLSDLNSVQHNTL 905 G E R PQ V D G+ L L+ + L Sbjct: 297 TGDRSERIRTYNYPQSRVTDHRIGLTLQKLDQIMEGKL 334
>Q2KI39:SPIN2_BOVIN Spindlin-2 - Bos taurus (Bovine)| Length = 258 Score = 32.3 bits (72), Expect = 4.4 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = +3 Query: 459 REIADDH-VGDGQRSHQVQERRRRARPHDVQRRPARGAADAHG-RPGEE 599 REI DDH + R ++ ++++R RP RR G +HG + G+E Sbjct: 15 REIVDDHTLSASMRKKKISQKKQRGRPSSQTRRNIVGCRISHGWKEGDE 63
>P56906:RF2_CHLPN Peptide chain release factor 2 - Chlamydia pneumoniae (Chlamydophila| pneumoniae) Length = 369 Score = 32.3 bits (72), Expect = 4.4 Identities = 21/83 (25%), Positives = 34/83 (40%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS N+ + L+AKL + R+ + K E + R Y P LV D Sbjct: 276 ERSQIQNRESCMKMLQAKLYQQVLQERLEKQSLDRKDKKEIAWGSQIRNYVFQPYTLVKD 335 Query: 958 LNTGIQLSDLNSVQHNTLTARLI 890 + TG + ++ ++ L I Sbjct: 336 VRTGHETGNVQAMLDGELLDEFI 358
>Q3BX07:RF1_XANC5 Peptide chain release factor 1 - Xanthomonas campestris pv.| vesicatoria (strain 85-10) Length = 361 Score = 32.3 bits (72), Expect = 4.4 Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS AN+ KA+ RLKA+LL R K V G + R PQ + D Sbjct: 260 ERSQHANRDKAMKRLKAQLLDAERSKAAAAEAQTRKLQVGSGDRSQRIRTYSFPQGRITD 319 Query: 958 LNT-GIQLSDLNSVQHNTLTA 899 G+ L DL ++ L A Sbjct: 320 HRVEGLTLYDLPNIIEGDLDA 340
>Q8PNU5:RF1_XANAC Peptide chain release factor 1 - Xanthomonas axonopodis pv. citri| Length = 361 Score = 32.3 bits (72), Expect = 4.4 Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS AN+ KA+ RLKA+LL R K V G + R PQ + D Sbjct: 260 ERSQHANRDKAMKRLKAQLLDTERSKAAAAEAQTRKLQVGSGDRSQRIRTYSFPQGRITD 319 Query: 958 LNT-GIQLSDLNSVQHNTLTA 899 G+ L DL ++ L A Sbjct: 320 HRVEGLTLYDLPNIIEGDLDA 340
>Q822M2:RF1_CHLCV Peptide chain release factor 1 - Chlamydophila caviae| Length = 361 Score = 32.3 bits (72), Expect = 4.4 Identities = 25/80 (31%), Positives = 33/80 (41%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS NK KA+ LKA++ + R + M V G E R Q V D Sbjct: 260 ERSQHKNKAKAMRILKARIRDAEMQRRQKEASAMRSAQVGSGDRSERIRTYNFSQNRVTD 319 Query: 958 LNTGIQLSDLNSVQHNTLTA 899 G+ L +L+ V L A Sbjct: 320 HRIGLTLYNLDKVMEGDLDA 339
>P27884:CAC1A_RABIT Voltage-dependent P/Q-type calcium channel subunit alpha-1A -| Oryctolagus cuniculus (Rabbit) Length = 2424 Score = 32.3 bits (72), Expect = 4.4 Identities = 40/127 (31%), Positives = 45/127 (35%), Gaps = 28/127 (22%) Frame = +3 Query: 483 GDGQRSHQVQERRRRARPHDVQRRPARGAADAHGRPGEELE*PVRVLAR----------- 629 G G+ S V RRRR P + RPAR A AH R P R+L Sbjct: 2231 GPGRVSPGVSARRRRRGPV-ARVRPARAPALAHARARARA--PARLLPELRLRRARRPRP 2287 Query: 630 -------------GRPLRSAV----PAASRRGRL*PTACLHPSASARAGQDRLPGPRHDG 758 GR LR A P A P+ CL +A Q LPGPR Sbjct: 2288 RQRRRPRRRRGGGGRALRRAPGPREPLAQDSPGRGPSVCLARAARPAGPQRLLPGPRTGQ 2347 Query: 759 ARRRAEP 779 A R P Sbjct: 2348 APRARLP 2354
>Q7MAF0:RISB_WOLSU 6,7-dimethyl-8-ribityllumazine synthase - Wolinella succinogenes| Length = 156 Score = 32.0 bits (71), Expect = 5.8 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 77 VSGVRDQLVLHAGATRHLELVLLPPQAEDP 166 V G RD V H G HL+L+L+P E P Sbjct: 32 VEGARDSFVRHGGKDEHLDLILVPGAFELP 61
>P47849:RF1_COXBU Peptide chain release factor 1 - Coxiella burnetii| Length = 361 Score = 32.0 bits (71), Expect = 5.8 Identities = 24/73 (32%), Positives = 32/73 (43%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS NK +A+S L++KLL R + + K V G E R PQ V D Sbjct: 262 ERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKSLVGSGDRSERIRTYNFPQGRVTD 321 Query: 958 LNTGIQLSDLNSV 920 + L L+ V Sbjct: 322 HRINLTLYQLDEV 334
>Q5L5L4:RF1_CHLAB Peptide chain release factor 1 - Chlamydophila abortus| Length = 361 Score = 32.0 bits (71), Expect = 5.8 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS NK KA+ LKA++ + R + M V G E R Q V D Sbjct: 260 ERSQHKNKAKAMRILKARIRDAEIQRRHKEASAMRSAQVGSGDRSERIRTYNFSQNRVTD 319 Query: 958 LNTGIQLSDLNSVQH---NTLTARLIMYQMQML 869 G+ L L+ V +T+T+ L+ + L Sbjct: 320 HRIGLTLYSLDKVMEGDLDTITSALVSHAYHQL 352
>Q88UZ4:RECA_LACPL Protein recA - Lactobacillus plantarum| Length = 380 Score = 32.0 bits (71), Expect = 5.8 Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = -3 Query: 675 GHDGRPRGRLTVEDGPEPVLGQATPVLHLVDHVRRQHPSPGGVAHHV-AERAAD 517 G G PRGR+ GPE G+ T LH V V++Q GG A ++ AE A D Sbjct: 51 GVGGYPRGRIVEIYGPES-SGKTTVALHAVAEVQKQ----GGTAAYIDAENALD 99
>Q6KCK3:RECA_LACPE Protein recA - Lactobacillus pentosus| Length = 378 Score = 32.0 bits (71), Expect = 5.8 Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = -3 Query: 675 GHDGRPRGRLTVEDGPEPVLGQATPVLHLVDHVRRQHPSPGGVAHHV-AERAAD 517 G G PRGR+ GPE G+ T LH V V++Q GG A ++ AE A D Sbjct: 51 GVGGYPRGRIVEIYGPES-SGKTTVALHAVAEVQKQ----GGTAAYIDAENALD 99
>Q06076:ABRD_ABRPR Abrin-d precursor [Contains: Abrin-d A chain - Abrus precatorius| (Indian licorice) (Crab's eye) Length = 528 Score = 32.0 bits (71), Expect = 5.8 Identities = 28/109 (25%), Positives = 40/109 (36%) Frame = +1 Query: 289 FPGCSLIAGATPLPFGDSYGAMARVAETALESXXXXXXXXXXXXXXXXXXXGTQQEIARS 468 FPG + L F SYG + R A E +E AR+ Sbjct: 99 FPGTQRYS----LRFDGSYGDLERWAHQTREEISLGLQALTHAISFLRSGASNDEEKART 154 Query: 469 LMTMSVMVSEAIRFRSVGGALGHMMCNAARRGVLPTHMVDQVKNWSSLS 615 L+ + M SEA R+R + +G + P M+ NW +LS Sbjct: 155 LIVIIQMASEAARYRCISNRVGVSIRTGTAFQPDPA-MLSLENNWDNLS 202
>Q505D9:TRI67_MOUSE Tripartite motif-containing protein 67 - Mus musculus (Mouse)| Length = 768 Score = 26.6 bits (57), Expect(2) = 6.1 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -3 Query: 225 SSAGCPEPHRSVTPNHGALRG 163 SS CP+ HRS + +H LRG Sbjct: 150 SSITCPQCHRSASLDHRGLRG 170 Score = 23.9 bits (50), Expect(2) = 6.1 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -1 Query: 338 SPNGSGVAPAMREQPGNSDHRRPSSGNRRGRCCLRVC 228 SPNG V P + PG+ S+ RG C +C Sbjct: 116 SPNGVRVLPMVPAPPGS------SAAAARGAACSSLC 146
>Q9DBU6:RSRC1_MOUSE Arginine/serine-rich coiled coil protein 1 - Mus musculus (Mouse)| Length = 334 Score = 31.6 bits (70), Expect = 7.5 Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 3/93 (3%) Frame = +3 Query: 516 RRRRARPHDVQRRPARGAADAHGRPGEELE*PVRVLARGRPL---RSAVPAASRRGRL*P 686 R R+ R H +RR R ++ + R RG+P RS + +RR R P Sbjct: 53 RDRQLRSHSYERRRRRRSSSSSSYGSRRKRSRSRSRGRGKPYRVQRSRSKSRTRRSRSRP 112 Query: 687 TACLHPSASARAGQDRLPGPRHDGARRRAEPAE 785 H +S R+ R D RR+ E Sbjct: 113 RPRSHSRSSERSSHRRTRSRSRDRDRRKVRDKE 145
>Q9HZ55:RLUB_PSEAE Ribosomal large subunit pseudouridine synthase B - Pseudomonas| aeruginosa Length = 386 Score = 31.6 bits (70), Expect = 7.5 Identities = 21/61 (34%), Positives = 29/61 (47%) Frame = +3 Query: 495 RSHQVQERRRRARPHDVQRRPARGAADAHGRPGEELE*PVRVLARGRPLRSAVPAASRRG 674 R +++R++ARP RP G A R E+ E R RP R P+A R+G Sbjct: 269 REKAERQQRKQARPLARSERPEAGRKRAPRR--EDGENAARRAPASRPARGPQPSAERKG 326 Query: 675 R 677 R Sbjct: 327 R 327
>Q67NU3:RECA_SYMTH Protein recA - Symbiobacterium thermophilum| Length = 350 Score = 31.6 bits (70), Expect = 7.5 Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = -3 Query: 675 GHDGRPRGRLTVEDGPEPVLGQATPVLHLVDHVRRQHPSPGGVAHHV-AERAAD 517 G G PRGR+T GPE G+ T LH++ ++ GGVA V AE A D Sbjct: 54 GVGGLPRGRITEIYGPES-SGKTTVALHVIAEAQKM----GGVAAFVDAEHALD 102
>P62216:RECA_LACJO Protein recA - Lactobacillus johnsonii| Length = 360 Score = 31.6 bits (70), Expect = 7.5 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = -3 Query: 684 ATAGHDGRPRGRLTVEDGPEPVLGQATPVLHLVDHVRRQHPSPGGVAHHV-AERAAD 517 A G G PRGR+ GPE G+ T LH V V+++ GG A ++ AE A D Sbjct: 49 AALGVGGYPRGRIIEVYGPES-SGKTTVALHAVAEVQKR----GGTAAYIDAENAMD 100
>Q5FL82:RECA_LACAC Protein recA - Lactobacillus acidophilus| Length = 363 Score = 31.6 bits (70), Expect = 7.5 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = -3 Query: 684 ATAGHDGRPRGRLTVEDGPEPVLGQATPVLHLVDHVRRQHPSPGGVAHHV-AERAAD 517 A G G PRGR+ GPE G+ T LH V V+++ GG A ++ AE A D Sbjct: 49 AAIGVGGYPRGRIIEVYGPES-SGKTTVALHAVAEVQKR----GGTAAYIDAENAMD 100
>P28590:ABRC_ABRPR Abrin-c precursor [Contains: Abrin-c A chain - Abrus precatorius| (Indian licorice) (Crab's eye) Length = 562 Score = 31.6 bits (70), Expect = 7.5 Identities = 28/109 (25%), Positives = 40/109 (36%) Frame = +1 Query: 289 FPGCSLIAGATPLPFGDSYGAMARVAETALESXXXXXXXXXXXXXXXXXXXGTQQEIARS 468 FPG + L F SYG + R A E +E AR+ Sbjct: 133 FPGTQRYS----LRFDGSYGDLERWAHQTREEISLGLQALTHAISFLRSGASNDEEKART 188 Query: 469 LMTMSVMVSEAIRFRSVGGALGHMMCNAARRGVLPTHMVDQVKNWSSLS 615 L+ + M SEA R+R + +G + P M+ NW +LS Sbjct: 189 LIVIIQMASEAARYRYISNRVGVSIRTGTAFQPDPA-MLSLENNWDNLS 236
>Q9W5D0:Y34F_DROME Uncharacterized protein CG12467 - Drosophila melanogaster (Fruit| fly) Length = 1561 Score = 31.2 bits (69), Expect = 9.8 Identities = 21/73 (28%), Positives = 33/73 (45%) Frame = +3 Query: 462 EIADDHVGDGQRSHQVQERRRRARPHDVQRRPARGAADAHGRPGEELE*PVRVLARGRPL 641 E+ +H+ + + H + R + DVQ G+ H R E L+ P ++ GRPL Sbjct: 168 ELLKNHIANQSQRHSIVGPVRNSLSLDVQDFTGSGSNPEHRRRSESLD-PQEII--GRPL 224 Query: 642 RSAVPAASRRGRL 680 S+ P R L Sbjct: 225 TSSYPHHQHRRNL 237
>Q4L4H9:RF2_STAHJ Peptide chain release factor 2 - Staphylococcus haemolyticus (strain| JCSC1435) Length = 371 Score = 31.2 bits (69), Expect = 9.8 Identities = 20/73 (27%), Positives = 33/73 (45%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS N+ A+ LKAKL + E + + + + E G + R Y P +V D Sbjct: 277 ERSQIKNREAAMKMLKAKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKD 336 Query: 958 LNTGIQLSDLNSV 920 T + +++V Sbjct: 337 HRTNEETGKVDAV 349
>Q8PC68:RF1_XANCP Peptide chain release factor 1 - Xanthomonas campestris pv.| campestris Length = 361 Score = 31.2 bits (69), Expect = 9.8 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS AN+ KA+ RLKA+L+ R K V G + R PQ + D Sbjct: 260 ERSQHANRDKAMKRLKAQLVEAERSKAAAAEAQTRKLQVGSGDRSQRIRTYSFPQGRITD 319 Query: 958 LNT-GIQLSDLNSVQHNTLTA 899 G+ L DL ++ L A Sbjct: 320 HRVEGLTLYDLPNIIEGDLDA 340
>Q4URB6:RF1_XANC8 Peptide chain release factor 1 - Xanthomonas campestris pv.| campestris (strain 8004) Length = 361 Score = 31.2 bits (69), Expect = 9.8 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Frame = -2 Query: 1138 ERSYFANKLKAVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHD 959 ERS AN+ KA+ RLKA+L+ R K V G + R PQ + D Sbjct: 260 ERSQHANRDKAMKRLKAQLVEAERSKAAAAKAQTRKLQVGSGDRSQRIRTYSFPQGRITD 319 Query: 958 LNT-GIQLSDLNSVQHNTLTA 899 G+ L DL ++ L A Sbjct: 320 HRVEGLTLYDLPNIIEGDLDA 340
>Q4QQS0:IRAK2_RAT Interleukin-1 receptor-associated kinase-like 2 - Rattus norvegicus| (Rat) Length = 624 Score = 31.2 bits (69), Expect = 9.8 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = -2 Query: 217 RLPGAAPERDAEPWGLAGILCLGRKQDKLQVAR--RPGVEHEL 95 R G PE AE W A +CL R++ L+ AR GVE +L Sbjct: 461 RKAGLLPEACAETWATAVSVCLRRREASLEEARVSMAGVEEQL 503
>P39881:CUTL1_CANFA Homeobox protein cut-like 1 - Canis familiaris (Dog)| Length = 975 Score = 31.2 bits (69), Expect = 9.8 Identities = 28/71 (39%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Frame = +3 Query: 564 GAADAHGRPGEELE*PVRVLARGRPLRSAVPAASRRGRL*PT--ACLHPSASARAGQDRL 737 G A+A P E E P R R R P RRG P A P+A+AR G R Sbjct: 806 GPAEAAVAPEEREEAPRPAEKRSRRPRGPGPGPGRRGGGGPAPGAPAAPAAAAR-GPSRR 864 Query: 738 PGPRHDGARRR 770 PG R RRR Sbjct: 865 PGARAKPRRRR 875 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 204,437,885 Number of extensions: 4269974 Number of successful extensions: 16270 Number of sequences better than 10.0: 44 Number of HSP's gapped: 16256 Number of HSP's successfully gapped: 47 Length of query: 430 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 314 Effective length of database: 68,868,219 Effective search space: 21624620766 Effective search space used: 21624620766 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
