| Clone Name | FLbaf3a05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001072998.1| Oryza sativa (japonica cultivar-group) Os12g0236900 (Os12g0236900) mRNA, complete cds Length = 1885 Score = 1185 bits (598), Expect = 0.0 Identities = 1110/1283 (86%) Strand = Plus / Plus Query: 282 ctgccgccgggcaagttggccatcctggagcgccccgtcccgtgctctcgcgggggcaga 341 ||||||||||| ||| |||||||||| || || |||||||| |||| || | ||||| Sbjct: 308 ctgccgccggggaaggtggccatcctcgaccgacccgtcccctgcttccgggagggcaag 367 Query: 342 gaccggccattacacttcgtcgctgctgggcaggacctcgaggcgggggatgtggctttc 401 |||| ||| | |||| |||||| || |||||||| |||||||| ||||||||||| ||| Sbjct: 368 gacctgccgctgcactacgtcgccgcggggcaggatctcgaggctggggatgtggcgttc 427 Query: 402 gaggtgcccatgtcgctcgttgtcacgctggagcgggttctcggcgacgagtccgtcgct 461 |||||||||||||||||||| |||||||||||| |||| ||||| ||||||||||||||| Sbjct: 428 gaggtgcccatgtcgctcgtcgtcacgctggagagggtgctcggagacgagtccgtcgct 487 Query: 462 gaattgttaacgacaaacaaattgtctgggctggcatgcttggcattgtatctcatgtat 521 |||||| |||| ||||||||||| |||| ||||||||||||||| ||||||||||||||| Sbjct: 488 gaattgctaacaacaaacaaattatctgagctggcatgcttggctttgtatctcatgtat 547 Query: 522 gagaagaagcaaggaagagattcactttggtacccgtatattaaagaacttgatcgtcag 581 ||||| ||||||||| ||||||| ||||||| || || ||||| || |||||||| ||| Sbjct: 548 gagaaaaagcaaggacaagattcattttggtatccttacattaaggagcttgatcgccag 607 Query: 582 cgaggcagggggcagctagctgttgaatcacctcttttatggactgaaagtgaattggat 641 ||||| |||||||| ||||||||||||| || ||| | ||||| ||||||||| || | Sbjct: 608 cgaggaagggggcaattagctgttgaatctccacttctgtggaccgaaagtgaactgaac 667 Query: 642 tacctgaatggcagccccatgagggatgaagttgttgtcagagatgagggaatnnnnnnn 701 |||||||| || |||||||| | |||||||||||||| ||||| |||||||| Sbjct: 668 tacctgaagggtagccccatcaaggatgaagttgttgcaagagacgagggaataaggcga 727 Query: 702 gagtataatgagcttgacacattgtggttcatggcaggttcattgtttaagcaataccct 761 |||||||||||||| |||||| |||||||||||||||||||||||||| ||||||| ||| Sbjct: 728 gagtataatgagctcgacacactgtggttcatggcaggttcattgtttcagcaatatcct 787 Query: 762 tttgatgtgcctactgaggcatttccgtttgagatcttcaagcaggcatttgttgcggta 821 ||||| | ||||| ||||| ||||| ||||||||||||||||| || ||||| || ||| Sbjct: 788 tttgacatacctaccgaggcttttccatttgagatcttcaagcaagcttttgtcgcagta 847 Query: 822 cagtcttgcgtggttcatttgcagaaggttagtttagcacgaagatttgcactagttccc 881 |||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 848 cagtcttgcgtggtccatttgcagaaagttagtttagctcgaagatttgcgctagttcca 907 Query: 882 ttgggcccaccactattgacgtacaagagcaactgcaaagcaatgctgacagctgttgat 941 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 908 ttgggcccaccactattgacctacaagagcaactgcaaagcaatgctgacagctgttggt 967 Query: 942 ggttctgttcgattgctggttgatcggccatacaaagcaggagaaccaataatcgtttgg 1001 | ||||||||| ||| | || ||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 968 gattctgttcggttggttgtggatcgaccatacaaagcgggagaaccaataatcgtctgg 1027 Query: 1002 tgtgggccacaaccaaactccaggttgcttctcaattatggttttgttgatgaggacaat 1061 ||||||||||| || ||||| || ||||| ||||| || |||||| |||| || || ||| Sbjct: 1028 tgtgggccacagcctaactctagattgctcctcaactacggttttattgacgaagataat 1087 Query: 1062 ccatatgaccgcatagcaatcgaggcatccctaaacactgaagatcctcaataccaagag 1121 |||||||| || |||| || |||||||||||||||| ||||||||||| | ||||||| Sbjct: 1088 ccatatgatcgtatagtgattgaggcatccctaaacatagaagatcctcagttccaagag 1147 Query: 1122 aagagaatggttgctcaaagaaatggaaagcttgcaatccaaaaattccaagtctgtgta 1181 |||||||||||||||||||||||||| ||||| || |||||||| ||||| |||||||| Sbjct: 1148 aagagaatggttgctcaaagaaatgggaagctggctatccaaaatttccatgtctgtgtg 1207 Query: 1182 ggcaaagagaagcaaactatttctgaaatgctgccatacttgagactaggatacatttca 1241 || ||||||||| |||| ||| | ||||||||||| || ||||| ||||||||||||||| Sbjct: 1208 ggtaaagagaaggaaacaattgcagaaatgctgccctatttgaggctaggatacatttca 1267 Query: 1242 gatccagatgaaatgcaatgtatactttcgtcggaaggtgatacatgtccagttagtcct 1301 ||||||||||||||||||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 1268 gatccagatgaaatgcaatccatactttcttcagaaggtgatacatgtccagtcagtcca 1327 Query: 1302 tgctcagagcgagctgtactggaccaacttgttgtgtacctgaaatcaagattggctggt 1361 ||| |||||||||| ||||| ||||||||||||| ||| || | ||| ||||||||| | Sbjct: 1328 tgcacagagcgagcagtacttgaccaacttgttggatacttggagtcacgattggctgat 1387 Query: 1362 tatccgactaatttggatgaggatgaagcaatgttggccgatggcagtttggaaccaaag 1421 ||||| || | ||||||||||||||| || |||||||| ||||||| |||||||||||| Sbjct: 1388 tatccaacaactttggatgaggatgatgctatgttggcagatggcaatttggaaccaaaa 1447 Query: 1422 aaagaagttgctactagacttgtaaggttagagaagaaaatgctgcatggctgtcttgag 1481 || ||||| |||||||| |||||||| || ||||||||| || ||||||| ||||| || Sbjct: 1448 aaggaagtcgctactaggcttgtaagattggagaagaaattgttgcatggttgtctccag 1507 Query: 1482 gctgctaacgagttcataagtggcttgcctgatcataccgtgtcaccttgccctgcacta 1541 |||||||| |||||||||| || |||||||| || || ||||||||||||||||| | | Sbjct: 1508 gctgctaatgagttcataaatgatttgcctgaccacactgtgtcaccttgccctgctcca 1567 Query: 1542 tatgctcctgaattgaaataaga 1564 | ||||||||||||||||||||| Sbjct: 1568 tttgctcctgaattgaaataaga 1590
>dbj|AK068145.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134J07, full insert sequence Length = 1886 Score = 1185 bits (598), Expect = 0.0 Identities = 1110/1283 (86%) Strand = Plus / Plus Query: 282 ctgccgccgggcaagttggccatcctggagcgccccgtcccgtgctctcgcgggggcaga 341 ||||||||||| ||| |||||||||| || || |||||||| |||| || | ||||| Sbjct: 309 ctgccgccggggaaggtggccatcctcgaccgacccgtcccctgcttccgggagggcaag 368 Query: 342 gaccggccattacacttcgtcgctgctgggcaggacctcgaggcgggggatgtggctttc 401 |||| ||| | |||| |||||| || |||||||| |||||||| ||||||||||| ||| Sbjct: 369 gacctgccgctgcactacgtcgccgcggggcaggatctcgaggctggggatgtggcgttc 428 Query: 402 gaggtgcccatgtcgctcgttgtcacgctggagcgggttctcggcgacgagtccgtcgct 461 |||||||||||||||||||| |||||||||||| |||| ||||| ||||||||||||||| Sbjct: 429 gaggtgcccatgtcgctcgtcgtcacgctggagagggtgctcggagacgagtccgtcgct 488 Query: 462 gaattgttaacgacaaacaaattgtctgggctggcatgcttggcattgtatctcatgtat 521 |||||| |||| ||||||||||| |||| ||||||||||||||| ||||||||||||||| Sbjct: 489 gaattgctaacaacaaacaaattatctgagctggcatgcttggctttgtatctcatgtat 548 Query: 522 gagaagaagcaaggaagagattcactttggtacccgtatattaaagaacttgatcgtcag 581 ||||| ||||||||| ||||||| ||||||| || || ||||| || |||||||| ||| Sbjct: 549 gagaaaaagcaaggacaagattcattttggtatccttacattaaggagcttgatcgccag 608 Query: 582 cgaggcagggggcagctagctgttgaatcacctcttttatggactgaaagtgaattggat 641 ||||| |||||||| ||||||||||||| || ||| | ||||| ||||||||| || | Sbjct: 609 cgaggaagggggcaattagctgttgaatctccacttctgtggaccgaaagtgaactgaac 668 Query: 642 tacctgaatggcagccccatgagggatgaagttgttgtcagagatgagggaatnnnnnnn 701 |||||||| || |||||||| | |||||||||||||| ||||| |||||||| Sbjct: 669 tacctgaagggtagccccatcaaggatgaagttgttgcaagagacgagggaataaggcga 728 Query: 702 gagtataatgagcttgacacattgtggttcatggcaggttcattgtttaagcaataccct 761 |||||||||||||| |||||| |||||||||||||||||||||||||| ||||||| ||| Sbjct: 729 gagtataatgagctcgacacactgtggttcatggcaggttcattgtttcagcaatatcct 788 Query: 762 tttgatgtgcctactgaggcatttccgtttgagatcttcaagcaggcatttgttgcggta 821 ||||| | ||||| ||||| ||||| ||||||||||||||||| || ||||| || ||| Sbjct: 789 tttgacatacctaccgaggcttttccatttgagatcttcaagcaagcttttgtcgcagta 848 Query: 822 cagtcttgcgtggttcatttgcagaaggttagtttagcacgaagatttgcactagttccc 881 |||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 849 cagtcttgcgtggtccatttgcagaaagttagtttagctcgaagatttgcgctagttcca 908 Query: 882 ttgggcccaccactattgacgtacaagagcaactgcaaagcaatgctgacagctgttgat 941 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 909 ttgggcccaccactattgacctacaagagcaactgcaaagcaatgctgacagctgttggt 968 Query: 942 ggttctgttcgattgctggttgatcggccatacaaagcaggagaaccaataatcgtttgg 1001 | ||||||||| ||| | || ||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 969 gattctgttcggttggttgtggatcgaccatacaaagcgggagaaccaataatcgtctgg 1028 Query: 1002 tgtgggccacaaccaaactccaggttgcttctcaattatggttttgttgatgaggacaat 1061 ||||||||||| || ||||| || ||||| ||||| || |||||| |||| || || ||| Sbjct: 1029 tgtgggccacagcctaactctagattgctcctcaactacggttttattgacgaagataat 1088 Query: 1062 ccatatgaccgcatagcaatcgaggcatccctaaacactgaagatcctcaataccaagag 1121 |||||||| || |||| || |||||||||||||||| ||||||||||| | ||||||| Sbjct: 1089 ccatatgatcgtatagtgattgaggcatccctaaacatagaagatcctcagttccaagag 1148 Query: 1122 aagagaatggttgctcaaagaaatggaaagcttgcaatccaaaaattccaagtctgtgta 1181 |||||||||||||||||||||||||| ||||| || |||||||| ||||| |||||||| Sbjct: 1149 aagagaatggttgctcaaagaaatgggaagctggctatccaaaatttccatgtctgtgtg 1208 Query: 1182 ggcaaagagaagcaaactatttctgaaatgctgccatacttgagactaggatacatttca 1241 || ||||||||| |||| ||| | ||||||||||| || ||||| ||||||||||||||| Sbjct: 1209 ggtaaagagaaggaaacaattgcagaaatgctgccctatttgaggctaggatacatttca 1268 Query: 1242 gatccagatgaaatgcaatgtatactttcgtcggaaggtgatacatgtccagttagtcct 1301 ||||||||||||||||||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 1269 gatccagatgaaatgcaatccatactttcttcagaaggtgatacatgtccagtcagtcca 1328 Query: 1302 tgctcagagcgagctgtactggaccaacttgttgtgtacctgaaatcaagattggctggt 1361 ||| |||||||||| ||||| ||||||||||||| ||| || | ||| ||||||||| | Sbjct: 1329 tgcacagagcgagcagtacttgaccaacttgttggatacttggagtcacgattggctgat 1388 Query: 1362 tatccgactaatttggatgaggatgaagcaatgttggccgatggcagtttggaaccaaag 1421 ||||| || | ||||||||||||||| || |||||||| ||||||| |||||||||||| Sbjct: 1389 tatccaacaactttggatgaggatgatgctatgttggcagatggcaatttggaaccaaaa 1448 Query: 1422 aaagaagttgctactagacttgtaaggttagagaagaaaatgctgcatggctgtcttgag 1481 || ||||| |||||||| |||||||| || ||||||||| || ||||||| ||||| || Sbjct: 1449 aaggaagtcgctactaggcttgtaagattggagaagaaattgttgcatggttgtctccag 1508 Query: 1482 gctgctaacgagttcataagtggcttgcctgatcataccgtgtcaccttgccctgcacta 1541 |||||||| |||||||||| || |||||||| || || ||||||||||||||||| | | Sbjct: 1509 gctgctaatgagttcataaatgatttgcctgaccacactgtgtcaccttgccctgctcca 1568 Query: 1542 tatgctcctgaattgaaataaga 1564 | ||||||||||||||||||||| Sbjct: 1569 tttgctcctgaattgaaataaga 1591
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 206 bits (104), Expect = 2e-49 Identities = 146/160 (91%) Strand = Plus / Plus Query: 843 cagaaggttagtttagcacgaagatttgcactagttcccttgggcccaccactattgacg 902 ||||| ||||||||||| ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 7548169 cagaaagttagtttagctcgaagatttgcgctagttccattgggcccaccactattgacc 7548228 Query: 903 tacaagagcaactgcaaagcaatgctgacagctgttgatggttctgttcgattgctggtt 962 ||||||||||||||||||||||||||||||||||||| || ||||||||| ||| | || Sbjct: 7548229 tacaagagcaactgcaaagcaatgctgacagctgttggtgattctgttcggttggttgtg 7548288 Query: 963 gatcggccatacaaagcaggagaaccaataatcgtttggt 1002 ||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 7548289 gatcgaccatacaaagcgggagaaccaataatcgtctggt 7548328 Score = 180 bits (91), Expect = 1e-41 Identities = 175/203 (86%) Strand = Plus / Plus Query: 459 gctgaattgttaacgacaaacaaattgtctgggctggcatgcttggcattgtatctcatg 518 ||||||||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||| Sbjct: 7547195 gctgaattgctaacaacaaacaaattatctgagctggcatgcttggctttgtatctcatg 7547254 Query: 519 tatgagaagaagcaaggaagagattcactttggtacccgtatattaaagaacttgatcgt 578 |||||||| ||||||||| ||||||| ||||||| || || ||||| || |||||||| Sbjct: 7547255 tatgagaaaaagcaaggacaagattcattttggtatccttacattaaggagcttgatcgc 7547314 Query: 579 cagcgaggcagggggcagctagctgttgaatcacctcttttatggactgaaagtgaattg 638 |||||||| |||||||| ||||||||||||| || ||| | ||||| ||||||||| || Sbjct: 7547315 cagcgaggaagggggcaattagctgttgaatctccacttctgtggaccgaaagtgaactg 7547374 Query: 639 gattacctgaatggcagccccat 661 | |||||||| || |||||||| Sbjct: 7547375 aactacctgaagggtagccccat 7547397 Score = 155 bits (78), Expect = 7e-34 Identities = 147/170 (86%) Strand = Plus / Plus Query: 1394 gttggccgatggcagtttggaaccaaagaaagaagttgctactagacttgtaaggttaga 1453 |||||| ||||||| |||||||||||| || ||||| |||||||| |||||||| || || Sbjct: 7549902 gttggcagatggcaatttggaaccaaaaaaggaagtcgctactaggcttgtaagattgga 7549961 Query: 1454 gaagaaaatgctgcatggctgtcttgaggctgctaacgagttcataagtggcttgcctga 1513 ||||||| || ||||||| ||||| |||||||||| |||||||||| || |||||||| Sbjct: 7549962 gaagaaattgttgcatggttgtctccaggctgctaatgagttcataaatgatttgcctga 7550021 Query: 1514 tcataccgtgtcaccttgccctgcactatatgctcctgaattgaaataag 1563 || || ||||||||||||||||| | || |||||||||||||||||||| Sbjct: 7550022 ccacactgtgtcaccttgccctgctccatttgctcctgaattgaaataag 7550071 Score = 141 bits (71), Expect = 1e-29 Identities = 113/127 (88%) Strand = Plus / Plus Query: 1173 gtctgtgtaggcaaagagaagcaaactatttctgaaatgctgccatacttgagactagga 1232 |||||||| || ||||||||| |||| ||| | ||||||||||| || ||||| |||||| Sbjct: 7548801 gtctgtgtgggtaaagagaaggaaacaattgcagaaatgctgccctatttgaggctagga 7548860 Query: 1233 tacatttcagatccagatgaaatgcaatgtatactttcgtcggaaggtgatacatgtcca 1292 |||||||||||||||||||||||||||| |||||||| || |||||||||||||||||| Sbjct: 7548861 tacatttcagatccagatgaaatgcaatccatactttcttcagaaggtgatacatgtcca 7548920 Query: 1293 gttagtc 1299 || |||| Sbjct: 7548921 gtaagtc 7548927 Score = 111 bits (56), Expect = 9e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 1084 aggcatccctaaacactgaagatcctcaataccaagagaagagaatggttgctcaaagaa 1143 ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 7548630 aggcatccctaaacatagaagatcctcagttccaagagaagagaatggttgctcaaagaa 7548689 Query: 1144 atggaaagcttgcaatccaaaaattcca 1171 |||| ||||| || |||||||| ||||| Sbjct: 7548690 atgggaagctggctatccaaaatttcca 7548717 Score = 107 bits (54), Expect = 1e-19 Identities = 72/78 (92%) Strand = Plus / Plus Query: 382 aggcgggggatgtggctttcgaggtgcccatgtcgctcgttgtcacgctggagcgggttc 441 |||| ||||||||||| ||||||||||||||||||||||| |||||||||||| |||| | Sbjct: 7546085 aggctggggatgtggcgttcgaggtgcccatgtcgctcgtcgtcacgctggagagggtgc 7546144 Query: 442 tcggcgacgagtccgtcg 459 |||| ||||||||||||| Sbjct: 7546145 tcggagacgagtccgtcg 7546162 Score = 93.7 bits (47), Expect = 2e-15 Identities = 83/95 (87%) Strand = Plus / Plus Query: 751 agcaatacccttttgatgtgcctactgaggcatttccgtttgagatcttcaagcaggcat 810 ||||||| |||||||| | ||||| ||||| ||||| ||||||||||||||||| || | Sbjct: 7547671 agcaatatccttttgacatacctaccgaggcttttccatttgagatcttcaagcaagctt 7547730 Query: 811 ttgttgcggtacagtcttgcgtggttcatttgcag 845 |||| || ||||||||||||||||| ||||||||| Sbjct: 7547731 ttgtcgcagtacagtcttgcgtggtccatttgcag 7547765 Score = 87.7 bits (44), Expect = 1e-13 Identities = 73/85 (85%) Strand = Plus / Plus Query: 665 ggatgaagttgttgtcagagatgagggaatnnnnnnngagtataatgagcttgacacatt 724 |||||||||||||| ||||| |||||||| |||||||||||||| |||||| | Sbjct: 7547497 ggatgaagttgttgcaagagacgagggaataaggcgagagtataatgagctcgacacact 7547556 Query: 725 gtggttcatggcaggttcattgttt 749 ||||||||||||||||||||||||| Sbjct: 7547557 gtggttcatggcaggttcattgttt 7547581 Score = 71.9 bits (36), Expect = 8e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 1296 agtccttgctcagagcgagctgtactggaccaacttgttgtgtacctgaaatcaagattg 1355 ||||| ||| |||||||||| ||||| ||||||||||||| ||| || | ||| ||||| Sbjct: 7549710 agtccatgcacagagcgagcagtacttgaccaacttgttggatacttggagtcacgattg 7549769 Query: 1356 gctggttatccgactaatttggatgaggatga 1387 |||| |||||| || | ||||||||||||||| Sbjct: 7549770 gctgattatccaacaactttggatgaggatga 7549801 Score = 52.0 bits (26), Expect = 0.008 Identities = 59/70 (84%) Strand = Plus / Plus Query: 1000 ggtgtgggccacaaccaaactccaggttgcttctcaattatggttttgttgatgaggaca 1059 ||||||||||||| || ||||| || ||||| ||||| || |||||| |||| || || | Sbjct: 7548469 ggtgtgggccacagcctaactctagattgctcctcaactacggttttattgacgaagata 7548528 Query: 1060 atccatatga 1069 |||||||||| Sbjct: 7548529 atccatatga 7548538 Score = 46.1 bits (23), Expect = 0.47 Identities = 83/103 (80%) Strand = Plus / Plus Query: 282 ctgccgccgggcaagttggccatcctggagcgccccgtcccgtgctctcgcgggggcaga 341 ||||||||||| ||| |||||||||| || || |||||||| |||| || | ||||| Sbjct: 7545905 ctgccgccggggaaggtggccatcctcgaccgacccgtcccctgcttccgggagggcaag 7545964 Query: 342 gaccggccattacacttcgtcgctgctgggcaggacctcgagg 384 |||| ||| | |||| |||||| || |||||||| ||||||| Sbjct: 7545965 gacctgccgctgcactacgtcgccgcggggcaggatctcgagg 7546007
>emb|AL731872.2|CNS08C8C Oryza sativa chromosome 12, . BAC OJ1003_E07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113215 Score = 206 bits (104), Expect = 2e-49 Identities = 146/160 (91%) Strand = Plus / Plus Query: 843 cagaaggttagtttagcacgaagatttgcactagttcccttgggcccaccactattgacg 902 ||||| ||||||||||| ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 36236 cagaaagttagtttagctcgaagatttgcgctagttccattgggcccaccactattgacc 36295 Query: 903 tacaagagcaactgcaaagcaatgctgacagctgttgatggttctgttcgattgctggtt 962 ||||||||||||||||||||||||||||||||||||| || ||||||||| ||| | || Sbjct: 36296 tacaagagcaactgcaaagcaatgctgacagctgttggtgattctgttcggttggttgtg 36355 Query: 963 gatcggccatacaaagcaggagaaccaataatcgtttggt 1002 ||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 36356 gatcgaccatacaaagcgggagaaccaataatcgtctggt 36395 Score = 180 bits (91), Expect = 1e-41 Identities = 175/203 (86%) Strand = Plus / Plus Query: 459 gctgaattgttaacgacaaacaaattgtctgggctggcatgcttggcattgtatctcatg 518 ||||||||| |||| ||||||||||| |||| ||||||||||||||| |||||||||||| Sbjct: 35262 gctgaattgctaacaacaaacaaattatctgagctggcatgcttggctttgtatctcatg 35321 Query: 519 tatgagaagaagcaaggaagagattcactttggtacccgtatattaaagaacttgatcgt 578 |||||||| ||||||||| ||||||| ||||||| || || ||||| || |||||||| Sbjct: 35322 tatgagaaaaagcaaggacaagattcattttggtatccttacattaaggagcttgatcgc 35381 Query: 579 cagcgaggcagggggcagctagctgttgaatcacctcttttatggactgaaagtgaattg 638 |||||||| |||||||| ||||||||||||| || ||| | ||||| ||||||||| || Sbjct: 35382 cagcgaggaagggggcaattagctgttgaatctccacttctgtggaccgaaagtgaactg 35441 Query: 639 gattacctgaatggcagccccat 661 | |||||||| || |||||||| Sbjct: 35442 aactacctgaagggtagccccat 35464 Score = 155 bits (78), Expect = 7e-34 Identities = 147/170 (86%) Strand = Plus / Plus Query: 1394 gttggccgatggcagtttggaaccaaagaaagaagttgctactagacttgtaaggttaga 1453 |||||| ||||||| |||||||||||| || ||||| |||||||| |||||||| || || Sbjct: 37969 gttggcagatggcaatttggaaccaaaaaaggaagtcgctactaggcttgtaagattgga 38028 Query: 1454 gaagaaaatgctgcatggctgtcttgaggctgctaacgagttcataagtggcttgcctga 1513 ||||||| || ||||||| ||||| |||||||||| |||||||||| || |||||||| Sbjct: 38029 gaagaaattgttgcatggttgtctccaggctgctaatgagttcataaatgatttgcctga 38088 Query: 1514 tcataccgtgtcaccttgccctgcactatatgctcctgaattgaaataag 1563 || || ||||||||||||||||| | || |||||||||||||||||||| Sbjct: 38089 ccacactgtgtcaccttgccctgctccatttgctcctgaattgaaataag 38138 Score = 141 bits (71), Expect = 1e-29 Identities = 113/127 (88%) Strand = Plus / Plus Query: 1173 gtctgtgtaggcaaagagaagcaaactatttctgaaatgctgccatacttgagactagga 1232 |||||||| || ||||||||| |||| ||| | ||||||||||| || ||||| |||||| Sbjct: 36868 gtctgtgtgggtaaagagaaggaaacaattgcagaaatgctgccctatttgaggctagga 36927 Query: 1233 tacatttcagatccagatgaaatgcaatgtatactttcgtcggaaggtgatacatgtcca 1292 |||||||||||||||||||||||||||| |||||||| || |||||||||||||||||| Sbjct: 36928 tacatttcagatccagatgaaatgcaatccatactttcttcagaaggtgatacatgtcca 36987 Query: 1293 gttagtc 1299 || |||| Sbjct: 36988 gtaagtc 36994 Score = 111 bits (56), Expect = 9e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 1084 aggcatccctaaacactgaagatcctcaataccaagagaagagaatggttgctcaaagaa 1143 ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 36697 aggcatccctaaacatagaagatcctcagttccaagagaagagaatggttgctcaaagaa 36756 Query: 1144 atggaaagcttgcaatccaaaaattcca 1171 |||| ||||| || |||||||| ||||| Sbjct: 36757 atgggaagctggctatccaaaatttcca 36784 Score = 107 bits (54), Expect = 1e-19 Identities = 72/78 (92%) Strand = Plus / Plus Query: 382 aggcgggggatgtggctttcgaggtgcccatgtcgctcgttgtcacgctggagcgggttc 441 |||| ||||||||||| ||||||||||||||||||||||| |||||||||||| |||| | Sbjct: 34152 aggctggggatgtggcgttcgaggtgcccatgtcgctcgtcgtcacgctggagagggtgc 34211 Query: 442 tcggcgacgagtccgtcg 459 |||| ||||||||||||| Sbjct: 34212 tcggagacgagtccgtcg 34229 Score = 93.7 bits (47), Expect = 2e-15 Identities = 83/95 (87%) Strand = Plus / Plus Query: 751 agcaatacccttttgatgtgcctactgaggcatttccgtttgagatcttcaagcaggcat 810 ||||||| |||||||| | ||||| ||||| ||||| ||||||||||||||||| || | Sbjct: 35738 agcaatatccttttgacatacctaccgaggcttttccatttgagatcttcaagcaagctt 35797 Query: 811 ttgttgcggtacagtcttgcgtggttcatttgcag 845 |||| || ||||||||||||||||| ||||||||| Sbjct: 35798 ttgtcgcagtacagtcttgcgtggtccatttgcag 35832 Score = 87.7 bits (44), Expect = 1e-13 Identities = 73/85 (85%) Strand = Plus / Plus Query: 665 ggatgaagttgttgtcagagatgagggaatnnnnnnngagtataatgagcttgacacatt 724 |||||||||||||| ||||| |||||||| |||||||||||||| |||||| | Sbjct: 35564 ggatgaagttgttgcaagagacgagggaataaggcgagagtataatgagctcgacacact 35623 Query: 725 gtggttcatggcaggttcattgttt 749 ||||||||||||||||||||||||| Sbjct: 35624 gtggttcatggcaggttcattgttt 35648 Score = 71.9 bits (36), Expect = 8e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 1296 agtccttgctcagagcgagctgtactggaccaacttgttgtgtacctgaaatcaagattg 1355 ||||| ||| |||||||||| ||||| ||||||||||||| ||| || | ||| ||||| Sbjct: 37777 agtccatgcacagagcgagcagtacttgaccaacttgttggatacttggagtcacgattg 37836 Query: 1356 gctggttatccgactaatttggatgaggatga 1387 |||| |||||| || | ||||||||||||||| Sbjct: 37837 gctgattatccaacaactttggatgaggatga 37868 Score = 52.0 bits (26), Expect = 0.008 Identities = 59/70 (84%) Strand = Plus / Plus Query: 1000 ggtgtgggccacaaccaaactccaggttgcttctcaattatggttttgttgatgaggaca 1059 ||||||||||||| || ||||| || ||||| ||||| || |||||| |||| || || | Sbjct: 36536 ggtgtgggccacagcctaactctagattgctcctcaactacggttttattgacgaagata 36595 Query: 1060 atccatatga 1069 |||||||||| Sbjct: 36596 atccatatga 36605 Score = 46.1 bits (23), Expect = 0.47 Identities = 83/103 (80%) Strand = Plus / Plus Query: 282 ctgccgccgggcaagttggccatcctggagcgccccgtcccgtgctctcgcgggggcaga 341 ||||||||||| ||| |||||||||| || || |||||||| |||| || | ||||| Sbjct: 33972 ctgccgccggggaaggtggccatcctcgaccgacccgtcccctgcttccgggagggcaag 34031 Query: 342 gaccggccattacacttcgtcgctgctgggcaggacctcgagg 384 |||| ||| | |||| |||||| || |||||||| ||||||| Sbjct: 34032 gacctgccgctgcactacgtcgccgcggggcaggatctcgagg 34074
>ref|NM_180707.1| Arabidopsis thaliana unknown protein (AT5G14260) mRNA, complete cds Length = 2132 Score = 95.6 bits (48), Expect = 6e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 911 caactgcaaagcaatgctgacagctgttgatggttctgttcgattgctggttgatcggcc 970 ||||||||| |||||||| || |||||||||||| ||||| | | |||| ||| |||| Sbjct: 1037 caactgcaaggcaatgcttactgctgttgatggtgctgttgaactcgtggtagataggcc 1096 Query: 971 atacaaagcaggagaaccaataatcgtttggtgtgggccacaaccaaactccaggttgct 1030 ||| || || || || || ||| | || |||||||||||||||||||| | | ||||| Sbjct: 1097 atataaggccggggatcctatagttgtctggtgtgggccacaaccaaatgcgaaattgct 1156 Query: 1031 tctcaattatggttttgttgatgaggacaatccatatgaccgcatagcaatcgaggcatc 1090 ||| || ||||| |||||||||||||| || || ||||| | || | | |||||| | Sbjct: 1157 tctgaactatggatttgttgatgaggataacccttatgatagagtaatagttgaggcagc 1216 Query: 1091 cctaaacactgaagatcctcaataccaagagaagagaatggttgctcaaagaaatggaaa 1150 | |||||||| |||||||||||||| || |||||||||||||||||||| || ||||| Sbjct: 1217 gttgaacactgaggatcctcaataccaggacaagagaatggttgctcaaaggaacggaaa 1276 Score = 75.8 bits (38), Expect = 5e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 708 aatgagcttgacacattgtggttcatggcaggttcattgtttaagcaatacccttttgat 767 |||||||||||||| | ||||||||||| || || |||||| |||||||||| ||||| Sbjct: 834 aatgagcttgacactgtctggttcatggctggatctttgtttcagcaatacccatttgac 893 Query: 768 gtgcctactgaggcatttccgtttgagatcttcaagcaggcatttgttgc 817 | || ||||| || ||| | |||||||| ||||| |||||||||||||| Sbjct: 894 ataccaactgaagctttttcatttgagattttcaaacaggcatttgttgc 943 Score = 44.1 bits (22), Expect = 1.8 Identities = 61/74 (82%) Strand = Plus / Plus Query: 507 ttgtatctcatgtatgagaagaagcaaggaagagattcactttggtacccgtatattaaa 566 |||||| | |||||||||||||| ||||||| | ||| | ||||| || ||||| | | Sbjct: 633 ttgtatttgatgtatgagaagaaacaaggaaagaaatcagtatggtatccctatataaga 692 Query: 567 gaacttgatcgtca 580 |||||||||||||| Sbjct: 693 gaacttgatcgtca 706
>ref|NM_203049.1| Arabidopsis thaliana unknown protein (AT5G14260) mRNA, complete cds Length = 2067 Score = 95.6 bits (48), Expect = 6e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 911 caactgcaaagcaatgctgacagctgttgatggttctgttcgattgctggttgatcggcc 970 ||||||||| |||||||| || |||||||||||| ||||| | | |||| ||| |||| Sbjct: 1037 caactgcaaggcaatgcttactgctgttgatggtgctgttgaactcgtggtagataggcc 1096 Query: 971 atacaaagcaggagaaccaataatcgtttggtgtgggccacaaccaaactccaggttgct 1030 ||| || || || || || ||| | || |||||||||||||||||||| | | ||||| Sbjct: 1097 atataaggccggggatcctatagttgtctggtgtgggccacaaccaaatgcgaaattgct 1156 Query: 1031 tctcaattatggttttgttgatgaggacaatccatatgaccgcatagcaatcgaggcatc 1090 ||| || ||||| |||||||||||||| || || ||||| | || | | |||||| | Sbjct: 1157 tctgaactatggatttgttgatgaggataacccttatgatagagtaatagttgaggcagc 1216 Query: 1091 cctaaacactgaagatcctcaataccaagagaagagaatggttgctcaaagaaatggaaa 1150 | |||||||| |||||||||||||| || |||||||||||||||||||| || ||||| Sbjct: 1217 gttgaacactgaggatcctcaataccaggacaagagaatggttgctcaaaggaacggaaa 1276 Score = 75.8 bits (38), Expect = 5e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 708 aatgagcttgacacattgtggttcatggcaggttcattgtttaagcaatacccttttgat 767 |||||||||||||| | ||||||||||| || || |||||| |||||||||| ||||| Sbjct: 834 aatgagcttgacactgtctggttcatggctggatctttgtttcagcaatacccatttgac 893 Query: 768 gtgcctactgaggcatttccgtttgagatcttcaagcaggcatttgttgc 817 | || ||||| || ||| | |||||||| ||||| |||||||||||||| Sbjct: 894 ataccaactgaagctttttcatttgagattttcaaacaggcatttgttgc 943 Score = 44.1 bits (22), Expect = 1.8 Identities = 61/74 (82%) Strand = Plus / Plus Query: 507 ttgtatctcatgtatgagaagaagcaaggaagagattcactttggtacccgtatattaaa 566 |||||| | |||||||||||||| ||||||| | ||| | ||||| || ||||| | | Sbjct: 633 ttgtatttgatgtatgagaagaaacaaggaaagaaatcagtatggtatccctatataaga 692 Query: 567 gaacttgatcgtca 580 |||||||||||||| Sbjct: 693 gaacttgatcgtca 706
>ref|NM_121430.3| Arabidopsis thaliana unknown protein (AT5G14260) mRNA, complete cds Length = 2017 Score = 95.6 bits (48), Expect = 6e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 911 caactgcaaagcaatgctgacagctgttgatggttctgttcgattgctggttgatcggcc 970 ||||||||| |||||||| || |||||||||||| ||||| | | |||| ||| |||| Sbjct: 1037 caactgcaaggcaatgcttactgctgttgatggtgctgttgaactcgtggtagataggcc 1096 Query: 971 atacaaagcaggagaaccaataatcgtttggtgtgggccacaaccaaactccaggttgct 1030 ||| || || || || || ||| | || |||||||||||||||||||| | | ||||| Sbjct: 1097 atataaggccggggatcctatagttgtctggtgtgggccacaaccaaatgcgaaattgct 1156 Query: 1031 tctcaattatggttttgttgatgaggacaatccatatgaccgcatagcaatcgaggcatc 1090 ||| || ||||| |||||||||||||| || || ||||| | || | | |||||| | Sbjct: 1157 tctgaactatggatttgttgatgaggataacccttatgatagagtaatagttgaggcagc 1216 Query: 1091 cctaaacactgaagatcctcaataccaagagaagagaatggttgctcaaagaaatggaaa 1150 | |||||||| |||||||||||||| || |||||||||||||||||||| || ||||| Sbjct: 1217 gttgaacactgaggatcctcaataccaggacaagagaatggttgctcaaaggaacggaaa 1276 Score = 75.8 bits (38), Expect = 5e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 708 aatgagcttgacacattgtggttcatggcaggttcattgtttaagcaatacccttttgat 767 |||||||||||||| | ||||||||||| || || |||||| |||||||||| ||||| Sbjct: 834 aatgagcttgacactgtctggttcatggctggatctttgtttcagcaatacccatttgac 893 Query: 768 gtgcctactgaggcatttccgtttgagatcttcaagcaggcatttgttgc 817 | || ||||| || ||| | |||||||| ||||| |||||||||||||| Sbjct: 894 ataccaactgaagctttttcatttgagattttcaaacaggcatttgttgc 943 Score = 44.1 bits (22), Expect = 1.8 Identities = 61/74 (82%) Strand = Plus / Plus Query: 507 ttgtatctcatgtatgagaagaagcaaggaagagattcactttggtacccgtatattaaa 566 |||||| | |||||||||||||| ||||||| | ||| | ||||| || ||||| | | Sbjct: 633 ttgtatttgatgtatgagaagaaacaaggaaagaaatcagtatggtatccctatataaga 692 Query: 567 gaacttgatcgtca 580 |||||||||||||| Sbjct: 693 gaacttgatcgtca 706
>gb|AY150480.1| Arabidopsis thaliana unknown protein (At5g14260) mRNA, complete cds Length = 1576 Score = 95.6 bits (48), Expect = 6e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 911 caactgcaaagcaatgctgacagctgttgatggttctgttcgattgctggttgatcggcc 970 ||||||||| |||||||| || |||||||||||| ||||| | | |||| ||| |||| Sbjct: 894 caactgcaaggcaatgcttactgctgttgatggtgctgttgaactcgtggtagataggcc 953 Query: 971 atacaaagcaggagaaccaataatcgtttggtgtgggccacaaccaaactccaggttgct 1030 ||| || || || || || ||| | || |||||||||||||||||||| | | ||||| Sbjct: 954 atataaggccggggatcctatagttgtctggtgtgggccacaaccaaatgcgaaattgct 1013 Query: 1031 tctcaattatggttttgttgatgaggacaatccatatgaccgcatagcaatcgaggcatc 1090 ||| || ||||| |||||||||||||| || || ||||| | || | | |||||| | Sbjct: 1014 tctgaactatggatttgttgatgaggataacccttatgatagagtaatagttgaggcagc 1073 Query: 1091 cctaaacactgaagatcctcaataccaagagaagagaatggttgctcaaagaaatggaaa 1150 | |||||||| |||||||||||||| || |||||||||||||||||||| || ||||| Sbjct: 1074 gttgaacactgaggatcctcaataccaggacaagagaatggttgctcaaaggaacggaaa 1133 Score = 75.8 bits (38), Expect = 5e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 708 aatgagcttgacacattgtggttcatggcaggttcattgtttaagcaatacccttttgat 767 |||||||||||||| | ||||||||||| || || |||||| |||||||||| ||||| Sbjct: 691 aatgagcttgacactgtctggttcatggctggatctttgtttcagcaatacccatttgac 750 Query: 768 gtgcctactgaggcatttccgtttgagatcttcaagcaggcatttgttgc 817 | || ||||| || ||| | |||||||| ||||| |||||||||||||| Sbjct: 751 ataccaactgaagctttttcatttgagattttcaaacaggcatttgttgc 800 Score = 44.1 bits (22), Expect = 1.8 Identities = 61/74 (82%) Strand = Plus / Plus Query: 507 ttgtatctcatgtatgagaagaagcaaggaagagattcactttggtacccgtatattaaa 566 |||||| | |||||||||||||| ||||||| | ||| | ||||| || ||||| | | Sbjct: 490 ttgtatttgatgtatgagaagaaacaaggaaagaaatcagtatggtatccctatataaga 549 Query: 567 gaacttgatcgtca 580 |||||||||||||| Sbjct: 550 gaacttgatcgtca 563
>gb|AY065084.1| Arabidopsis thaliana putative protein (At5g14260; F18O22_50) mRNA, complete cds Length = 2078 Score = 95.6 bits (48), Expect = 6e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 911 caactgcaaagcaatgctgacagctgttgatggttctgttcgattgctggttgatcggcc 970 ||||||||| |||||||| || |||||||||||| ||||| | | |||| ||| |||| Sbjct: 984 caactgcaaggcaatgcttactgctgttgatggtgctgttgaactcgtggtagataggcc 1043 Query: 971 atacaaagcaggagaaccaataatcgtttggtgtgggccacaaccaaactccaggttgct 1030 ||| || || || || || ||| | || |||||||||||||||||||| | | ||||| Sbjct: 1044 atataaggccggggatcctatagttgtctggtgtgggccacaaccaaatgcgaaattgct 1103 Query: 1031 tctcaattatggttttgttgatgaggacaatccatatgaccgcatagcaatcgaggcatc 1090 ||| || ||||| |||||||||||||| || || ||||| | || | | |||||| | Sbjct: 1104 tctgaactatggatttgttgatgaggataacccttatgatagagtaatagttgaggcagc 1163 Query: 1091 cctaaacactgaagatcctcaataccaagagaagagaatggttgctcaaagaaatggaaa 1150 | |||||||| |||||||||||||| || |||||||||||||||||||| || ||||| Sbjct: 1164 gttgaacactgaggatcctcaataccaggacaagagaatggttgctcaaaggaacggaaa 1223 Score = 75.8 bits (38), Expect = 5e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 708 aatgagcttgacacattgtggttcatggcaggttcattgtttaagcaatacccttttgat 767 |||||||||||||| | ||||||||||| || || |||||| |||||||||| ||||| Sbjct: 781 aatgagcttgacactgtctggttcatggctggatctttgtttcagcaatacccatttgac 840 Query: 768 gtgcctactgaggcatttccgtttgagatcttcaagcaggcatttgttgc 817 | || ||||| || ||| | |||||||| ||||| |||||||||||||| Sbjct: 841 ataccaactgaagctttttcatttgagattttcaaacaggcatttgttgc 890 Score = 44.1 bits (22), Expect = 1.8 Identities = 61/74 (82%) Strand = Plus / Plus Query: 507 ttgtatctcatgtatgagaagaagcaaggaagagattcactttggtacccgtatattaaa 566 |||||| | |||||||||||||| ||||||| | ||| | ||||| || ||||| | | Sbjct: 580 ttgtatttgatgtatgagaagaaacaaggaaagaaatcagtatggtatccctatataaga 639 Query: 567 gaacttgatcgtca 580 |||||||||||||| Sbjct: 640 gaacttgatcgtca 653
>emb|BX831365.1|CNS09YP0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS82ZC07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1902 Score = 95.6 bits (48), Expect = 6e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 911 caactgcaaagcaatgctgacagctgttgatggttctgttcgattgctggttgatcggcc 970 ||||||||| |||||||| || |||||||||||| ||||| | | |||| ||| |||| Sbjct: 1001 caactgcaaggcaatgcttactgctgttgatggtgctgttgaactcgtggtagataggcc 1060 Query: 971 atacaaagcaggagaaccaataatcgtttggtgtgggccacaaccaaactccaggttgct 1030 ||| || || || || || ||| | || |||||||||||||||||||| | | ||||| Sbjct: 1061 atataaggccggggatcctatagttgtctggtgtgggccacaaccaaatgcgaaattgct 1120 Query: 1031 tctcaattatggttttgttgatgaggacaatccatatgaccgcatagcaatcgaggcatc 1090 ||| || ||||| |||||||||||||| || || ||||| | || | | |||||| | Sbjct: 1121 tctgaactatggatttgttgatgaggataacccttatgatagagtaatagttgaggcagc 1180 Query: 1091 cctaaacactgaagatcctcaataccaagagaagagaatggttgctcaaagaaatggaaa 1150 | |||||||| |||||||||||||| || |||||||||||||||||||| || ||||| Sbjct: 1181 gttgaacactgaggatcctcaataccaggacaagagaatggttgctcaaaggaacggaaa 1240 Score = 75.8 bits (38), Expect = 5e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 708 aatgagcttgacacattgtggttcatggcaggttcattgtttaagcaatacccttttgat 767 |||||||||||||| | ||||||||||| || || |||||| |||||||||| ||||| Sbjct: 798 aatgagcttgacactgtctggttcatggctggatctttgtttcagcaatacccatttgac 857 Query: 768 gtgcctactgaggcatttccgtttgagatcttcaagcaggcatttgttgc 817 | || ||||| || ||| | |||||||| ||||| |||||||||||||| Sbjct: 858 ataccaactgaagctttttcatttgagattttcaaacaggcatttgttgc 907 Score = 46.1 bits (23), Expect = 0.47 Identities = 64/75 (85%), Gaps = 2/75 (2%) Strand = Plus / Plus Query: 507 ttgtatctcatgtatgagaagaagcaagg-aagagattcactttggtacccgtatattaa 565 |||||| | |||||||||||||| ||||| |||||| ||| | ||||| || ||||| | Sbjct: 597 ttgtatttgatgtatgagaagaaacaaggaaagaga-tcagtatggtatccctatatgag 655 Query: 566 agaacttgatcgtca 580 ||||||||||||||| Sbjct: 656 agaacttgatcgtca 670
>gb|AY074312.1| Arabidopsis thaliana unknown protein (At5g14260) mRNA, complete cds Length = 1997 Score = 87.7 bits (44), Expect = 1e-13 Identities = 191/240 (79%) Strand = Plus / Plus Query: 911 caactgcaaagcaatgctgacagctgttgatggttctgttcgattgctggttgatcggcc 970 ||||||||| |||||||| || |||||||||||| ||||| | | |||| ||| |||| Sbjct: 1037 caactgcaaggcaatgcttactgctgttgatggtgctgttgaactcgtggtagataggcc 1096 Query: 971 atacaaagcaggagaaccaataatcgtttggtgtgggccacaaccaaactccaggttgct 1030 ||| || || || || || ||| | || |||||||||||||||||||| | | ||||| Sbjct: 1097 atataaggccggggatcctatagttgtctggtgtgggccacaaccaaatgcgaaattgct 1156 Query: 1031 tctcaattatggttttgttgatgaggacaatccatatgaccgcatagcaatcgaggcatc 1090 ||| || ||||| |||||||||||||| || || ||||| | || | | |||||| | Sbjct: 1157 tctgaactatggatttgttgatgaggataacccttatgatagagtaatagttgaggcagc 1216 Query: 1091 cctaaacactgaagatcctcaataccaagagaagagaatggttgctcaaagaaatggaaa 1150 | |||||||| | |||||||||||| || |||||||||||||||||||| || ||||| Sbjct: 1217 gttgaacactgagggtcctcaataccaggacaagagaatggttgctcaaaggaacggaaa 1276 Score = 75.8 bits (38), Expect = 5e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 708 aatgagcttgacacattgtggttcatggcaggttcattgtttaagcaatacccttttgat 767 |||||||||||||| | ||||||||||| || || |||||| |||||||||| ||||| Sbjct: 834 aatgagcttgacactgtctggttcatggctggatctttgtttcagcaatacccatttgac 893 Query: 768 gtgcctactgaggcatttccgtttgagatcttcaagcaggcatttgttgc 817 | || ||||| || ||| | |||||||| ||||| |||||||||||||| Sbjct: 894 ataccaactgaagctttttcatttgagattttcaaacaggcatttgttgc 943 Score = 44.1 bits (22), Expect = 1.8 Identities = 61/74 (82%) Strand = Plus / Plus Query: 507 ttgtatctcatgtatgagaagaagcaaggaagagattcactttggtacccgtatattaaa 566 |||||| | |||||||||||||| ||||||| | ||| | ||||| || ||||| | | Sbjct: 633 ttgtatttgatgtatgagaagaaacaaggaaagaaatcagtatggtatccctatataaga 692 Query: 567 gaacttgatcgtca 580 |||||||||||||| Sbjct: 693 gaacttgatcgtca 706
>emb|BX833547.1|CNS09Z5A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZF06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1900 Score = 87.7 bits (44), Expect = 1e-13 Identities = 191/240 (79%) Strand = Plus / Plus Query: 911 caactgcaaagcaatgctgacagctgttgatggttctgttcgattgctggttgatcggcc 970 ||||||||| |||||||| || |||||||||||| ||||| | | |||| ||| |||| Sbjct: 958 caactgcaaggcaatgcttactgctgttgatggtgctgttgaactcgtggtagataggcc 1017 Query: 971 atacaaagcaggagaaccaataatcgtttggtgtgggccacaaccaaactccaggttgct 1030 ||| || || || || || ||| | | |||||||||||||||||||| | | ||||| Sbjct: 1018 atataaggccggggatcctatagttttctggtgtgggccacaaccaaatgcgaaattgct 1077 Query: 1031 tctcaattatggttttgttgatgaggacaatccatatgaccgcatagcaatcgaggcatc 1090 ||| || ||||| |||||||||||||| || || ||||| | || | | |||||| | Sbjct: 1078 tctgaactatggatttgttgatgaggataacccttatgatagagtaatagttgaggcagc 1137 Query: 1091 cctaaacactgaagatcctcaataccaagagaagagaatggttgctcaaagaaatggaaa 1150 | |||||||| |||||||||||||| || |||||||||||||||||||| || ||||| Sbjct: 1138 gttgaacactgaggatcctcaataccaggacaagagaatggttgctcaaaggaacggaaa 1197 Score = 67.9 bits (34), Expect = 1e-07 Identities = 91/110 (82%) Strand = Plus / Plus Query: 708 aatgagcttgacacattgtggttcatggcaggttcattgtttaagcaatacccttttgat 767 |||||||||||||| | ||||||||||| || || |||||| |||||||||| ||||| Sbjct: 756 aatgagcttgacactgtctggttcatggctggatctttgtttcagcaatacccatttgac 815 Query: 768 gtgcctactgaggcatttccgtttgagatcttcaagcaggcatttgttgc 817 | || ||||| || ||| | ||||| || ||||| |||||||||||||| Sbjct: 816 atcccaactgaagctttttcatttgaaattttcaaacaggcatttgttgc 865
>gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete sequence Length = 134105 Score = 71.9 bits (36), Expect = 8e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1098 actgaagatcctcaataccaagagaagagaatggttgctcaaagaaatggaaagct 1153 ||||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 58692 actgaagatccacaatatcaagataaaagaatagttgctcaaagaaatggaaagct 58747 Score = 54.0 bits (27), Expect = 0.002 Identities = 105/131 (80%) Strand = Plus / Plus Query: 493 tggcatgcttggcattgtatctcatgtatgagaagaagcaaggaagagattcactttggt 552 |||| |||||||| |||||||| ||||||||||| || || |||| | || | |||| Sbjct: 57017 tggcgtgcttggccttgtatctgatgtatgagaaaaaacagggaaagaaatctttctggt 57076 Query: 553 acccgtatattaaagaacttgatcgtcagcgaggcagggggcagctagctgttgaatcac 612 | || || |||| ||||||||||| || ||||||||||| || || || || ||||||| Sbjct: 57077 atccatacattagggaacttgatcggcaacgaggcaggggtcaactggcagtggaatcac 57136 Query: 613 ctcttttatgg 623 ||||| ||||| Sbjct: 57137 ctcttctatgg 57147 Score = 46.1 bits (23), Expect = 0.47 Identities = 38/43 (88%) Strand = Plus / Plus Query: 909 agcaactgcaaagcaatgctgacagctgttgatggttctgttc 951 ||||||||||| |||||| | || |||||||||||| |||||| Sbjct: 58323 agcaactgcaaggcaatgttaactgctgttgatggtgctgttc 58365
>emb|AL163817.1|ATF18O22 Arabidopsis thaliana DNA chromosome 5, BAC clone F18O22 (ESSA project) Length = 100269 Score = 71.9 bits (36), Expect = 8e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1095 aacactgaagatcctcaataccaagagaagagaatggttgctcaaagaaatggaaa 1150 |||||||| |||||||||||||| || |||||||||||||||||||| || ||||| Sbjct: 21823 aacactgaggatcctcaataccaggacaagagaatggttgctcaaaggaacggaaa 21878 Score = 52.0 bits (26), Expect = 0.008 Identities = 50/58 (86%) Strand = Plus / Plus Query: 1000 ggtgtgggccacaaccaaactccaggttgcttctcaattatggttttgttgatgagga 1057 ||||||||||||||||||| | | |||||||| || ||||| |||||||||||||| Sbjct: 21632 ggtgtgggccacaaccaaatgcgaaattgcttctgaactatggatttgttgatgagga 21689 Score = 48.1 bits (24), Expect = 0.12 Identities = 36/40 (90%) Strand = Plus / Plus Query: 911 caactgcaaagcaatgctgacagctgttgatggttctgtt 950 ||||||||| |||||||| || |||||||||||| ||||| Sbjct: 21454 caactgcaaggcaatgcttactgctgttgatggtgctgtt 21493 Score = 46.1 bits (23), Expect = 0.47 Identities = 56/67 (83%) Strand = Plus / Plus Query: 751 agcaatacccttttgatgtgcctactgaggcatttccgtttgagatcttcaagcaggcat 810 |||||||||| ||||| | || ||||| || ||| | |||||||| ||||| ||||||| Sbjct: 21080 agcaatacccatttgacataccaactgaagctttttcatttgagattttcaaacaggcat 21139 Query: 811 ttgttgc 817 ||||||| Sbjct: 21140 ttgttgc 21146 Score = 44.1 bits (22), Expect = 1.8 Identities = 61/74 (82%) Strand = Plus / Plus Query: 507 ttgtatctcatgtatgagaagaagcaaggaagagattcactttggtacccgtatattaaa 566 |||||| | |||||||||||||| ||||||| | ||| | ||||| || ||||| | | Sbjct: 20656 ttgtatttgatgtatgagaagaaacaaggaaagaaatcagtatggtatccctatataaga 20715 Query: 567 gaacttgatcgtca 580 |||||||||||||| Sbjct: 20716 gaacttgatcgtca 20729
>gb|AC158189.2| Selaginella moellendorffii clone JGIASXY-5M21, complete sequence Length = 35522 Score = 52.0 bits (26), Expect = 0.008 Identities = 44/50 (88%) Strand = Plus / Plus Query: 789 tttgagatcttcaagcaggcatttgttgcggtacagtcttgcgtggttca 838 |||||||| ||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 28386 tttgagattttcaagcaggcctttgtcgcggtccagtcttgtgtcgttca 28435 Score = 42.1 bits (21), Expect = 7.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 888 ccaccactattgacgtacaagagcaactgcaaagcaatgct 928 |||||||||||| | ||||||||||| ||||| || ||||| Sbjct: 28543 ccaccactattggcttacaagagcaattgcaaggccatgct 28583
>gb|AC189564.1| Brassica rapa subsp. pekinensis clone KBrH009B23, complete sequence Length = 124136 Score = 50.1 bits (25), Expect = 0.030 Identities = 37/41 (90%) Strand = Plus / Plus Query: 911 caactgcaaagcaatgctgacagctgttgatggttctgttc 951 ||||||||| |||||||| || |||||||||||| |||||| Sbjct: 77767 caactgcaaggcaatgcttaccgctgttgatggtgctgttc 77807 Score = 46.1 bits (23), Expect = 0.47 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1104 gatcctcaataccaagagaagagaatggttgctcaaagaaatggaaa 1150 ||||||||||| || || |||||| ||||||||||||| || ||||| Sbjct: 78143 gatcctcaatatcaggacaagagactggttgctcaaaggaacggaaa 78189
>emb|CT828967.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA250G07, full insert sequence Length = 2352 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 gcctcctccgccttgtccggca 81 |||||||||||||||||||||| Sbjct: 861 gcctcctccgccttgtccggca 840
>emb|CT828966.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA222D18, full insert sequence Length = 2506 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 gcctcctccgccttgtccggca 81 |||||||||||||||||||||| Sbjct: 835 gcctcctccgccttgtccggca 814
>emb|CT828965.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA219J10, full insert sequence Length = 2449 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 gcctcctccgccttgtccggca 81 |||||||||||||||||||||| Sbjct: 894 gcctcctccgccttgtccggca 873
>ref|NM_001054983.1| Oryza sativa (japonica cultivar-group) Os02g0806400 (Os02g0806400) mRNA, complete cds Length = 1412 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 gcctcctccgccttgtccggca 81 |||||||||||||||||||||| Sbjct: 525 gcctcctccgccttgtccggca 504
>gb|AC137819.20| Medicago truncatula clone mth2-21i24, complete sequence Length = 126455 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 911 caactgcaaagcaatgctgacagctg 936 ||||||||||||||||||||| |||| Sbjct: 26416 caactgcaaagcaatgctgactgctg 26441
>gb|AC166156.4| Mus musculus BAC clone RP24-274H19 from chromosome 3, complete sequence Length = 176294 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 525 aagaagcaaggaagagattcactttg 550 ||||||||||||| |||||||||||| Sbjct: 61734 aagaagcaaggaaaagattcactttg 61759
>ref|XM_708603.1| Candida albicans SC5314 hypothetical protein (CaO19.8649), mRNA Length = 2550 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1413 gaaccaaagaaagaagttgcta 1434 |||||||||||||||||||||| Sbjct: 1822 gaaccaaagaaagaagttgcta 1843
>ref|XM_708558.1| Candida albicans SC5314 hypothetical protein (CaO19.1047), mRNA Length = 2550 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1413 gaaccaaagaaagaagttgcta 1434 |||||||||||||||||||||| Sbjct: 1822 gaaccaaagaaagaagttgcta 1843
>gb|AC164958.3| Mus musculus BAC clone RP23-359G24 from chromosome 3, complete sequence Length = 230133 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 525 aagaagcaaggaagagattcactttg 550 ||||||||||||| |||||||||||| Sbjct: 145796 aagaagcaaggaaaagattcactttg 145821
>gb|AC164003.2| Mus musculus chromosome 18, clone RP23-480F11, complete sequence Length = 176015 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ctttccctcatccacaccaacc 30 |||||||||||||||||||||| Sbjct: 150725 ctttccctcatccacaccaacc 150746
>gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 map B68, complete sequence Length = 102004 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1683 ccagtggtggagccaggaattt 1704 |||||||||||||||||||||| Sbjct: 18696 ccagtggtggagccaggaattt 18717
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 gcctcctccgccttgtccggca 81 |||||||||||||||||||||| Sbjct: 34430225 gcctcctccgccttgtccggca 34430204
>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049O12, from chromosome 2, complete sequence Length = 155154 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 60 gcctcctccgccttgtccggca 81 |||||||||||||||||||||| Sbjct: 74974 gcctcctccgccttgtccggca 74995
>dbj|AP004153.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1111_C07 Length = 115190 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 gcctcctccgccttgtccggca 81 |||||||||||||||||||||| Sbjct: 46467 gcctcctccgccttgtccggca 46446
>dbj|AK107867.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-C03, full insert sequence Length = 872 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 gcctcctccgccttgtccggca 81 |||||||||||||||||||||| Sbjct: 520 gcctcctccgccttgtccggca 499
>gb|AC102562.13| Mus musculus chromosome 18, clone RP23-205H1, complete sequence Length = 210975 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 ctttccctcatccacaccaacc 30 |||||||||||||||||||||| Sbjct: 163018 ctttccctcatccacaccaacc 162997
>emb|AJ249204.1|ATH249204 Arabidopsis thaliana pyk20 gene, promoter region Length = 4037 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1683 ccagtggtggagccaggaattt 1704 |||||||||||||||||||||| Sbjct: 1859 ccagtggtggagccaggaattt 1838
>gb|CP000462.1| Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome Length = 4744448 Score = 42.1 bits (21), Expect = 7.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 75 tccggcacccaccatcgcctccttc 99 |||||||||||||||||||| |||| Sbjct: 3773771 tccggcacccaccatcgccttcttc 3773795
>emb|CT954324.8| Mouse DNA sequence from clone RP23-36P5 on chromosome 9, complete sequence Length = 192707 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1557 aaataagagaagcaagcatgc 1577 ||||||||||||||||||||| Sbjct: 106019 aaataagagaagcaagcatgc 105999
>gb|AC149717.2| Bos taurus BAC CH240-194N8 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 140707 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 gaagaagcaaggaagagattc 544 ||||||||||||||||||||| Sbjct: 17815 gaagaagcaaggaagagattc 17795
>gb|AC136973.16| Medicago truncatula clone mth2-24n22, complete sequence Length = 109432 Score = 42.1 bits (21), Expect = 7.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1832 cactatgatgattgagagttagcat 1856 ||||||||| ||||||||||||||| Sbjct: 735 cactatgattattgagagttagcat 711
>gb|AC147498.14| Medicago truncatula clone mth2-6f18, complete sequence Length = 135726 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1684 cagtggtggagccaggaattt 1704 ||||||||||||||||||||| Sbjct: 5779 cagtggtggagccaggaattt 5799
>gb|AC121888.3| Mus musculus BAC clone RP24-142M5 from chromosome 1, complete sequence Length = 158354 Score = 42.1 bits (21), Expect = 7.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1406 cagtttggaaccaaagaaagaagtt 1430 ||||||||||| ||||||||||||| Sbjct: 80512 cagtttggaacaaaagaaagaagtt 80488
>gb|AC106799.3| Homo sapiens chromosome 5 clone RP11-445O3, complete sequence Length = 176095 Score = 42.1 bits (21), Expect = 7.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1334 tgtgtacctgaaatcaagattggctggtt 1362 |||||| || ||||||||||||||||||| Sbjct: 5434 tgtgtatctaaaatcaagattggctggtt 5406
>emb|AL513303.11| Human DNA sequence from clone RP11-464C19 on chromosome 10 Contains the 5' end of the COPEB gene for core promoter element binding protein (GBF ZF9 Zf9 BCD1 CPBP KLF6), two novel genes and a CpG island, complete sequence Length = 187833 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1670 gtggtggcactcaccagtggt 1690 ||||||||||||||||||||| Sbjct: 126518 gtggtggcactcaccagtggt 126498
>gb|AC156796.2| Mus musculus BAC clone RP24-90N20 from chromosome 9, complete sequence Length = 204185 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1557 aaataagagaagcaagcatgc 1577 ||||||||||||||||||||| Sbjct: 29414 aaataagagaagcaagcatgc 29394
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 tctcggcgacgagtccgtcgc 460 ||||||||||||||||||||| Sbjct: 6076476 tctcggcgacgagtccgtcgc 6076496
>gb|AC010634.6| Homo sapiens chromosome 5 clone CTD-2318H23, complete sequence Length = 118994 Score = 42.1 bits (21), Expect = 7.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1334 tgtgtacctgaaatcaagattggctggtt 1362 |||||| || ||||||||||||||||||| Sbjct: 104817 tgtgtatctaaaatcaagattggctggtt 104789
>gb|AC011241.7| Homo sapiens BAC clone RP11-467P13 from 2, complete sequence Length = 104891 Score = 42.1 bits (21), Expect = 7.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 607 aatcacctcttttatggactgaaag 631 |||||| |||||||||||||||||| Sbjct: 5671 aatcacttcttttatggactgaaag 5647
>gb|AC007878.2| Homo sapiens BAC clone RP11-236P2 from 2, complete sequence Length = 185134 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1670 gtggtggcactcaccagtggt 1690 ||||||||||||||||||||| Sbjct: 156569 gtggtggcactcaccagtggt 156549
>ref|XM_954446.1| Neurospora crassa OR74A hypothetical protein (NCU02411.1) partial mRNA Length = 4476 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 atggcctcctccgccttgtcc 77 ||||||||||||||||||||| Sbjct: 1136 atggcctcctccgccttgtcc 1116 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 322,221,569 Number of extensions: 17080631 Number of successful extensions: 390066 Number of sequences better than 10.0: 47 Number of HSP's gapped: 390043 Number of HSP's successfully gapped: 107 Length of query: 1905 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1882 Effective length of database: 18,503,978,556 Effective search space: 34824487642392 Effective search space used: 34824487642392 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)