ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf155i20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK099043:Os03g0828100 | 234 | 5e-62 | 2 | AK059132:Os03g0828100 | 234 | 5e-62 | 3 | AK062799:Os03g0828100 | 182 | 2e-46 | 4 | AK068500:Os03g0169400 | 66 | 2e-11 | 5 | AK099373:Os01g0256600 | 49 | 4e-06 | 6 | AK063884:Os01g0256600 | 49 | 4e-06 | 7 | AK071362:Os03g0694800 | 39 | 0.003 | 8 | AK068043:Os02g0163600 | 31 | 1.0 | 9 | Os04g0565400:Os04g0565400 | 29 | 3.0 | 10 | AK102189:Os03g0805400 | 29 | 3.9 | 11 | AK071708:Os03g0805400 | 29 | 3.9 | 12 | Os02g0113200:Os02g0113200 | 28 | 5.1 | 13 | Os01g0847400:Os01g0847400 | 28 | 8.8 | 14 | AK106524:Os06g0552400 | 28 | 8.8 | 15 | AK105948:Os01g0119000 | 28 | 8.8 | 16 | AK071050:Os01g0119000 | 28 | 8.8 |
|---|
>AK099043:Os03g0828100 | Length = 170 Score = 234 bits (597), Expect = 5e-62 Identities = 130/171 (76%), Positives = 133/171 (77%), Gaps = 1/171 (0%) Frame = +3 Query: 63 MLASPALAGATHSFLTFVSGSRSIXXXXXXXXXXXXXXXXXXXXXXXXXX-STPNADRIA 239 MLASPALAGA +F VSGS I STP ADRIA Sbjct: 1 MLASPALAGA-RAFAATVSGSLGIPIPAISAPSPSQARRRASLVVVAKVKVSTPQADRIA 59 Query: 240 RHDRLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLASASTMHKSLSKELEYSAGP 419 RH RLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTL SASTMHKSLSK+LEYSAGP Sbjct: 60 RHVRLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLVSASTMHKSLSKDLEYSAGP 119 Query: 420 TTEVAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALADAARENGLEF 572 T EVAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALADAARENGL+F Sbjct: 120 TVEVAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALADAARENGLDF 170
>AK059132:Os03g0828100 | Length = 170 Score = 234 bits (597), Expect = 5e-62 Identities = 130/171 (76%), Positives = 133/171 (77%), Gaps = 1/171 (0%) Frame = +3 Query: 63 MLASPALAGATHSFLTFVSGSRSIXXXXXXXXXXXXXXXXXXXXXXXXXX-STPNADRIA 239 MLASPALAGA +F VSGS I STP ADRIA Sbjct: 1 MLASPALAGA-RAFAATVSGSLGIPIPAISAPSPSQARRRASLVVVAKVKVSTPQADRIA 59 Query: 240 RHDRLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLASASTMHKSLSKELEYSAGP 419 RH RLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTL SASTMHKSLSK+LEYSAGP Sbjct: 60 RHVRLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLVSASTMHKSLSKDLEYSAGP 119 Query: 420 TTEVAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALADAARENGLEF 572 T EVAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALADAARENGL+F Sbjct: 120 TVEVAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALADAARENGLDF 170
>AK062799:Os03g0828100 | Length = 100 Score = 182 bits (463), Expect = 2e-46 Identities = 91/95 (95%), Positives = 93/95 (97%) Frame = +3 Query: 288 RLSVFRSNKHLYAQVIDDTKSCTLASASTMHKSLSKELEYSAGPTTEVAQKIGEVIAKSC 467 RLSVFRSNKHLYAQVIDDTKSCTL SASTMHKSLSK+LEYSAGPT EVAQKIGEVIAKSC Sbjct: 6 RLSVFRSNKHLYAQVIDDTKSCTLVSASTMHKSLSKDLEYSAGPTVEVAQKIGEVIAKSC 65 Query: 468 LEKGITKVVFDRGGFLYHGRIKALADAARENGLEF 572 LEKGITKVVFDRGGFLYHGRIKALADAARENGL+F Sbjct: 66 LEKGITKVVFDRGGFLYHGRIKALADAARENGLDF 100
>AK068500:Os03g0169400 | Length = 175 Score = 66.2 bits (160), Expect = 2e-11 Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 1/92 (1%) Frame = +3 Query: 240 RHDRLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLASASTMHKSLSKELEYSAGP 419 R+ RL+KK +GT +PRLSVF SN+ LYA ++DD L ST+ K++ + A Sbjct: 66 RNRRLQKKFNGTATKPRLSVFCSNRQLYAMLVDDHNRKILFYGSTLQKAICGDPPCGA-- 123 Query: 420 TTEVAQKIGEVIAKSCLEKGITKV-VFDRGGF 512 E A ++GE + ++C E IT++ +DR GF Sbjct: 124 -VEAAGRVGEELIRACKELDITEISSYDRNGF 154
>AK099373:Os01g0256600 | Length = 114 Score = 48.9 bits (115), Expect = 4e-06 Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 1/118 (0%) Frame = +3 Query: 219 PNADRIARHDRLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLASASTMHKSLSKE 398 P +R AR R K L + SNK++ AQV+ + SAS+ K L Sbjct: 4 PPPERAARITRFLKPYL-------LRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPN 56 Query: 399 LEYSAGPTTEVAQKIGEVIAKSCLEKGITKV-VFDRGGFLYHGRIKALADAARENGLE 569 +E + A KIG+++ + L+KGI V + + YHG+++A+ D+ RE G++ Sbjct: 57 MESTR--DVAAAAKIGKLLGERLLQKGIPAVCIHMKREQKYHGKVRAVIDSVREAGVK 112
>AK063884:Os01g0256600 | Length = 114 Score = 48.9 bits (115), Expect = 4e-06 Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 1/118 (0%) Frame = +3 Query: 219 PNADRIARHDRLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLASASTMHKSLSKE 398 P +R AR R K L + SNK++ AQV+ + SAS+ K L Sbjct: 4 PPPERAARITRFLKPYL-------LRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPN 56 Query: 399 LEYSAGPTTEVAQKIGEVIAKSCLEKGITKV-VFDRGGFLYHGRIKALADAARENGLE 569 +E + A KIG+++ + L+KGI V + + YHG+++A+ D+ RE G++ Sbjct: 57 MESTR--DVAAAAKIGKLLGERLLQKGIPAVCIHMKREQKYHGKVRAVIDSVREAGVK 112
>AK071362:Os03g0694800 | Length = 114 Score = 39.3 bits (90), Expect = 0.003 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Frame = +3 Query: 291 LSVFRSNKHLYAQVIDDTKSCTLASASTMHKSLSKELEYSAGPTTEVAQKIGEVIAKSCL 470 L + +N + AQVI + SAS+ K L +E + A KIG+++ + L Sbjct: 21 LKMHFTNNFVSAQVIHTPSATVACSASSQEKLLRPSMESTR--DVAAAAKIGKLLGERLL 78 Query: 471 EKGITKV-VFDRGGFLYHGRIKALADAARENGLE 569 +GI V V YHG+++A+ D+ R G++ Sbjct: 79 FRGIPAVSVSMSRDQTYHGKVRAVMDSLRAAGVK 112
>AK068043:Os02g0163600 | Length = 167 Score = 30.8 bits (68), Expect = 1.0 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 8/53 (15%) Frame = +2 Query: 14 ARETTNPTTRSAAQVS--------HASLAGARRRHPLLPDLRVGQPQHPPPVR 148 +R T+P + SAA ++ H L AR H LP R G P+ PP R Sbjct: 14 SRGATSPCSTSAASMAAARTTNTLHRLLPLARAVHSSLPPSRYGDPRSPPQAR 66
>Os04g0565400:Os04g0565400 | Length = 464 Score = 29.3 bits (64), Expect = 3.0 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +3 Query: 405 YSAGPTTEVAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALADAAREN 560 + AG +K GEV+ + +++ I K++ G R KAL DA R + Sbjct: 400 FKAGLLVRPWEKHGEVLPAATIQEVIKKMMASDEGLAVRQRAKALGDAVRSS 451
>AK102189:Os03g0805400 | Length = 415 Score = 28.9 bits (63), Expect = 3.9 Identities = 15/59 (25%), Positives = 27/59 (45%) Frame = -2 Query: 568 SSPFSLAASARALMRPW*RKPPRSKTTLVIPFSKQDLAITSPIFCATSVVGPAEYSSSF 392 +S F L +RAL++PW + ++T ++ F K + F S V + + F Sbjct: 31 ASSFDLTRRSRALVQPWVTRRVLAETPSIVRFQKVHHKLLDSFFSVLSCVVSVPFYTGF 89
>AK071708:Os03g0805400 | Length = 415 Score = 28.9 bits (63), Expect = 3.9 Identities = 15/59 (25%), Positives = 27/59 (45%) Frame = -2 Query: 568 SSPFSLAASARALMRPW*RKPPRSKTTLVIPFSKQDLAITSPIFCATSVVGPAEYSSSF 392 +S F L +RAL++PW + ++T ++ F K + F S V + + F Sbjct: 31 ASSFDLTRRSRALVQPWVTRRVLAETPSIVRFQKVHHKLLDSFFSVLSCVVSVPFYTGF 89
>Os02g0113200:Os02g0113200 | Length = 590 Score = 28.5 bits (62), Expect = 5.1 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 13/47 (27%) Frame = +2 Query: 44 SAAQVSHASLAGARR-----------RHPLLPDLRVGQP--QHPPPV 145 +AA SHA L G R R PL PDL G+P + PPP+ Sbjct: 2 TAAAASHAPLPGRRHPAARRLSAAATRLPLPPDLAEGRPPGRAPPPI 48
>Os01g0847400:Os01g0847400 | Length = 136 Score = 27.7 bits (60), Expect = 8.8 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -1 Query: 293 ESWPLRGAAHLLAEAVVAGDAVGIGRGHLGLGEDDQ 186 + W GA E V G+A G GRG G G +D+ Sbjct: 5 QGWGEEGAGRHAPEGGVCGEAEGGGRGADGRGGEDE 40
>AK106524:Os06g0552400 | Length = 395 Score = 27.7 bits (60), Expect = 8.8 Identities = 12/42 (28%), Positives = 20/42 (47%) Frame = -3 Query: 465 KIWQSLHLSFVPLQLLAQQSTQAPLKEICALLRLKPECTTLC 340 K+W S + + P L + E+C L+ + P+C LC Sbjct: 350 KVWPSYNSNTCPCYNLVALHSSNFCLELCILMYIAPKCMLLC 391
>AK105948:Os01g0119000 | Length = 482 Score = 27.7 bits (60), Expect = 8.8 Identities = 19/64 (29%), Positives = 26/64 (40%) Frame = -2 Query: 520 W*RKPPRSKTTLVIPFSKQDLAITSPIFCATSVVGPAEYSSSFERDLCIVEAEARVHDFV 341 W R S FSK+D PI V G S+ F D C V+ + R++ Sbjct: 74 WQRPKDTSGAVSAEEFSKRDSTNAKPIENGKVVCG----SNGFYSDTCDVDGDVRINGTA 129 Query: 340 SSIT 329 S+T Sbjct: 130 LSVT 133
>AK071050:Os01g0119000 | Length = 482 Score = 27.7 bits (60), Expect = 8.8 Identities = 19/64 (29%), Positives = 26/64 (40%) Frame = -2 Query: 520 W*RKPPRSKTTLVIPFSKQDLAITSPIFCATSVVGPAEYSSSFERDLCIVEAEARVHDFV 341 W R S FSK+D PI V G S+ F D C V+ + R++ Sbjct: 74 WQRPKDTSGAVSAEEFSKRDSTNAKPIENGKVVCG----SNGFYSDTCDVDGDVRINGTA 129 Query: 340 SSIT 329 S+T Sbjct: 130 LSVT 133 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 19,024,804 Number of extensions: 398157 Number of successful extensions: 1192 Number of sequences better than 10.0: 16 Number of HSP's gapped: 1187 Number of HSP's successfully gapped: 16 Length of query: 250 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 152 Effective length of database: 11,475,837 Effective search space: 1744327224 Effective search space used: 1744327224 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
